Pregenerated sensors for OLFR1329 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096705Ensembl transcript IDs: ENSMUST00000071979.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | AGAGAAAGCCTTGCAGCGCCCCTGGGTGGACTTGATCTTGAGAATTaGCATGACAATACGAATGTAGGAGGCCACAATAAGGGAAATTGG | + |
Preference number: 5 (lower is better) Translates to: RESLAAPLGGLDLEN*HDNTNVGGHNKGNW Trigger: CCAATTTCCCTTATTGTGGCCTCCTACATTCGTATTGTCATGGCAATTCTCAAGATCAAGTCCACCCAGGGGCGCTGCAAGGCTTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071979.2 |
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CDS TCA 90 bp | ATAACCAAAATGACAATCAAGACAGAGTCCACCATCTCAATGACATaGGTATCCATGCAAGCCAGGCTACGCACTGAAGGACCTTCACAG | + |
Preference number: 5 (lower is better) Translates to: ITKMTIKTESTISMT*VSMQARLRTEGPSQ Trigger: CTGTGAAGGTCCTTCAGTGCGTAGCCTGGCTTGCATGGATACTCATGTCATTGAGATGGTGGACTCTGTCTTGATTGTCATTTTGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071979.2 |
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CDS TCA 72 bp | AGGGTTGAGCAAGGCTGTGAAGACATTGTAAAAGAGTaGGACCTGCTTGTCTCGCTCAGGGGAATAGCTGGA | + |
Preference number: 6 (lower is better) Translates to: RVEQGCEDIVKE*DLLVSLRGIAG Trigger: TCCAGCTATTCCCCTGAGCGAGACAAGCAGGTCTCACTCTTTTACAATGTCTTCACAGCCTTGCTCAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071979.2 |
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CDS TCA 72 bp | AATGACATGAGTATCCATGCAAGCCAGGCTACGCACTaGAGGACCTTCACAGAAGTAGTGGTTGACCCTGTT | + |
Preference number: 6 (lower is better) Translates to: NDMSIHASQATH*RTFTEVVVDPV Trigger: AACAGGGTCAACCACTACTTCTGTGAAGGTCCTTCAGTGCGTAGCCTGGCTTGCATGGATACTCATGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071979.2 |