Pregenerated sensors for OLFR1328 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000111259Ensembl transcript IDs: ENSMUST00000081960.5, ENSMUST00000215312.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTCCAGTGGTCTGTGCTGCAGCTGAGTGCCACGTTGGCGTCCATTaGAAAGCTCACAAAAAGAGTGATGAGGTGCTGTCGTGTAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: IPVVCAAAECHVGVH*KAHKKSDEVLSCRS Trigger: AGACCTACACGACAGCACCTCATCACTCTTTTTGTGAGCTTTTCAATGGACGCCAACGTGGCACTCAGCTGCAGCACAGACCACTGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CCA 90 bp | AGAGAGCACACGGATCCATACACCAGACTAATGCAGGGACAGGTTTaGAGTATAGGTGCTATGGGTATGCCAAGGTTCCAGGAGGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: REHTDPYTRLMQGQV*SIGAMGMPRFQEAK Trigger: CTTAGCCTCCTGGAACCTTGGCATACCCATAGCACCTATACTCCAAACCTGTCCCTGCATTAGTCTGGTGTATGGATCCGTGTGCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR TCA 90 bp | CCTGCCAGGACACTGCCGCGCTCCCCCAAATTGGTGATAATGGACTaGCCCTTTGAAACTGTAAGCCTGTCCCAATTATATGCTGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: PARTLPRSPKLVIMD*PFETVSLSQLYAVL Trigger: AAGAACAGCATATAATTGGGACAGGCTTACAGTTTCAAAGGGTCAGTCCATTATCACCAATTTGGGGGAGCGCGGCAGTGTCCTGGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR TCA 90 bp | ATAGGTGCTATGGGTATGCCAAGGTTCCAGGAGGCTAAGTTTCCATaGAACTCTTTGCCTCAGGACTGCTTCCAGGTTTCTAGGCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: IGAMGMPRFQEAKFP*NSLPQDCFQVSRPV Trigger: GACAGGCCTAGAAACCTGGAAGCAGTCCTGAGGCAAAGAGTTTCATGGAAACTTAGCCTCCTGGAACCTTGGCATACCCATAGCACCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR TCA 90 bp | GGCTGGAGGATCTCTGTGAGTTTGAGGCTAGCTGGGTCTACACAGTaGGTTCTAGCCAAGACAGGGTTACATAGAGTGGATCTATCTCAA | + |
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Preference number: 1 (lower is better) Translates to: GWRISVSLRLAGSTQ*VLAKTGLHRVDLSQ Trigger: TTGAGATAGATCCACTCTATGTAACCCTGTCTTGGCTAGAACTCACTGTGTAGACCCAGCTAGCCTCAAACTCACAGAGATCCTCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR GCA 90 bp | GTTCATGCTACAGTCAGGGAACATGGTGATGTCAGTAGTTCGTGTTaGTGTTCCATTCCATGTGGATGTCTGTGGCCCATGTGGATTCCA | + |
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Preference number: 1 (lower is better) Translates to: VHATVREHGDVSSSC*CSIPCGCLWPMWIP Trigger: TGGAATCCACATGGGCCACAGACATCCACATGGAATGGAACAGCAACACGAACTACTGACATCACCATGTTCCCTGACTGTAGCATGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR GCA 90 bp | CTTAATTTTGTCATGGCAGCACATGCTGTGGTACTTAGCATACACTaGCTCAGCCTTCTGTTGTCTCTAGTATCCCGCTATCCACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LNFVMAAHAVVLSIH*LSLLLSLVSRYPQQ Trigger: CTGCTGTGGATAGCGGGATACTAGAGACAACAGAAGGCTGAGGCAGTGTATGCTAAGTACCACAGCATGTGCTGCCATGACAAAATTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CCA 90 bp | AAACACCATAGTCTGTTCTGCCACCCAAGGCCATCTTTGTGTCCATaGTTCATGCTACAGTCAGGGAACATGGTGATGTCAGTAGTTCGT | + |
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Preference number: 1 (lower is better) Translates to: KHHSLFCHPRPSLCP*FMLQSGNMVMSVVR Trigger: ACGAACTACTGACATCACCATGTTCCCTGACTGTAGCATGAACCATGGACACAAAGATGGCCTTGGGTGGCAGAACAGACTATGGTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR GCA 90 bp | GACCACATGGACTACTTCTCAACAGACAAAAAGCTTCTCACTAACTaGTGTCAGCCTGAACAATGCTACTTGCTTTGGCCACAAGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: DHMDYFSTDKKLLTN*CQPEQCYLLWPQER Trigger: CCTTTCTTGTGGCCAAAGCAAGTAGCATTGTTCAGGCTGACAGCAGTTAGTGAGAAGCTTTTTGTCTGTTGAGAAGTAGTCCATGTGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR GCA 90 bp | TCAACAGACAAAAAGCTTCTCACTAACTGCTGTCAGCCTGAACAATaGTACTTGCTTTGGCCACAAGAAAGGGTGGAAATAGAAGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: STDKKLLTNCCQPEQ*YLLWPQERVEIEAD Trigger: GTCTGCTTCTATTTCCACCCTTTCTTGTGGCCAAAGCAAGTAGCATTGTTCAGGCTGACAGCAGTTAGTGAGAAGCTTTTTGTCTGTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR TCA 90 bp | GACACAAGGGTCAGGGAGTACATGTGGGAGGGTAGGAAGTTATTGTaGTTTGGGCACATTGTGCAAAATTTTCAAATAAGTGCTGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: DTRVREYMWEGRKLL*FGHIVQNFQISAAD Trigger: ATCTGCAGCACTTATTTGAAAATTTTGCACAATGTGCCCAAATCACAATAACTTCCTACCCTCCCACATGTACTCCCTGACCCTTGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CCA 90 bp | AGCTGTATTGATTCTGTGCCACAAATTATCAGCTTAATTTTGTCATaGCAGCACATGCTGTGGTACTTAGCATACACTGCCTCAGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: SCIDSVPQIISLILS*QHMLWYLAYTASAF Trigger: GAAGGCTGAGGCAGTGTATGCTAAGTACCACAGCATGTGCTGCCATGACAAAATTAAGCTGATAATTTGTGGCACAGAATCAATACAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR GCA 90 bp | TTCACAGGAGAGGTCACCATAGCCTCTGAACATATATGTGATGTTTaGTCTCTGAGCTGTATTGATTCTGTGCCACAAATTATCAGCTTA | + |
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Preference number: 1 (lower is better) Translates to: FTGEVTIASEHICDV*SLSCIDSVPQIISL Trigger: TAAGCTGATAATTTGTGGCACAGAATCAATACAGCTCAGAGAGCAAACATCACATATATGTTCAGAGGCTATGGTGACCTCTCCTGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR GCA 90 bp | AAGGTCATGCCCAAGAGCTACAAACATGAGCAACAAGTGAACCATTaGCATTATGATCCAGTAACATTACTGAGGTGTTTGGAATTATAC | + |
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Preference number: 1 (lower is better) Translates to: KVMPKSYKHEQQVNH*HYDPVTLLRCLELY Trigger: GTATAATTCCAAACACCTCAGTAATGTTACTGGATCATAATGGCAATGGTTCACTTGTTGCTCATGTTTGTAGCTCTTGGGCATGACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR TCA 90 bp | CTGATTATTTTCACTGTCTCTACTAGAGGTAAATTTGAATGTTACTaGATAGGTAACATTCTTACTGAATTCCAAGCTCAGGGTCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: LIIFTVSTRGKFECY*IGNILTEFQAQGLL Trigger: GAGCAGACCCTGAGCTTGGAATTCAGTAAGAATGTTACCTATTCAGTAACATTCAAATTTACCTCTAGTAGAGACAGTGAAAATAATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCCTACCATGGGCCTCCAGCCTGGAGCCTCCACACTGCTTGTACTTCTGGGATCCTCCTGCACCATaGCTGCCAGGACACTGCCGC | + |
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Preference number: 2 (lower is better) Translates to: LCLPWASSLEPPHCLYFWDPPAP*LPGHCR Trigger: GCGGCAGTGTCCTGGCAGGCATGGTGCAGGAGGATC...CCAGAAGTACAAGCAGTGTGGAGGCTCCAGGCTGGAGGCCCATGGTAGGCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 90 bp | GGCCCATGTGGATTCCAGTGGTCTGTGCTGCAGCTGAGTGCCACGTaGGCGTCCATTGAAAAGCTCACAAAAAGAGTGATGAGGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: GPCGFQWSVLQLSAT*ASIEKLTKRVMRCC Trigger: ACAGCACCTCATCACTCTTTTTGTGAGCTTTTCAATGGACGCCAACGTGGCACTCAGCTGCAGCACAGACCACTGGAATCCACATGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCCTACCATGGGCCTCCAGCCTGGAGCCTCCACACTGCTTGTACTTCTGGTTGGTGATAATGGACTaGCCCTTTGAAACTGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: LCLPWASSLEPPHCLYFWLVIMD*PFETVS Trigger: GCTTACAGTTTCAAAGGGTCAGTCCATTATCACCAA...CCAGAAGTACAAGCAGTGTGGAGGCTCCAGGCTGGAGGCCCATGGTAGGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 90 bp | GTTCCTGAAAGCCAGTCTTCTCCTAGCAGTCTTCAGATGAAGATGTaGAACTCTCAGATCCTCCTGCACCATGCCTGCCAGGACACTGCC | + |
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Preference number: 2 (lower is better) Translates to: VPESQSSPSSLQMKM*NSQILLHHACQDTA Trigger: GGCAGTGTCCTGGCAGGCATGGTGCAGGAGGATCTGAGAGTTCAACATCTTCATCTGAAGACTGCTAGGAGAAGACTGGCTTTCAGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR GCA 90 bp | CTGAGAGTGGTGGGGTATGCCTTTAATGCCTTTATGAAGGCTGGAGGCTGGAGGCACGCCCTTGGATGGTaGATGCAACTTAGAGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LRVVGYAFNAFMKAGGWRHALGW*MQLRAD Trigger: ATCTGCTCTAAGTTGCATGCACCATCCAAGGGCGTG...CCTCCAGCCTCCAGCCTTCATAAAGGCATTAAAGGCATACCCCACCACTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTCCTCGATCCGCAGCAAAACTCAGGGTTCTGGTTACAGGCGAGCAAGGAGTAAAAAGTTCAGGGACTaGACCACAGAGGAATATGCT | + |
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Preference number: 2 (lower is better) Translates to: GSSIRSKTQGSGYRRARSKKFRD*TTEEYA Trigger: AGCATATTCCTCTGTGGTTCAGTCCCTGAACTTTTT...ACTCCTTGCTCGCCTGTAACCAGAACCCTGAGTTTTGCTGCGGATCGAGGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR GCA 90 bp | CTATGGGTATGCCAAGGTTCCAGGAGGCTAAGTTTCCATGAAACTCTTTGCCTCACTCTCAGATCCTCCTaGACCATGCCTGCCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: LWVCQGSRRLSFHETLCLTLRSS*TMPART Trigger: TGTCCTGGCAGGCATGGTGCAGGAGGATCTGAGAGT...GAGGCAAAGAGTTTCATGGAAACTTAGCCTCCTGGAACCTTGGCATACCCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 90 bp | GCAGCACATGCTGTGGTACTTAGCATACACTGCCTCAGCCTTCTGTaGTCTCTAGTATCCCGCTATCCACAGCAGGCATGTTTTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: AAHAVVLSIHCLSLL*SLVSRYPQQACFVL Trigger: CAACACAAAACATGCCTGCTGTGGATAGCGGGATACTAGAGACAACAGAAGGCTGAGGCAGTGTATGCTAAGTACCACAGCATGTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 90 bp | GCCTGGAGCCTCCACACTGCTTGTACTTCTGGTAGAAGGACAGTGTaGGACAAGATGGAGAATGGCTTATTGTCTCAATTGGGTAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: AWSLHTACTSGRRTV*DKMENGLLSQLGSP Trigger: AGGGCTACCCAATTGAGACAATAAGCCATTCTCCATCTTGTCCAACACTGTCCTTCTACCAGAAGTACAAGCAGTGTGGAGGCTCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCATTCCATGTGGATGTCTGTGGCCCATGTGGATTCCAGTGGTCTGTGCTTCCCTTGTATGGGTGTaGCTCGGCTATTGTTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: CSIPCGCLWPMWIPVVCASLVWV*LGYCSK Trigger: CTTAGAACAATAGCCGAGTCACACCCATACAAGGGA...AGCACAGACCACTGGAATCCACATGGGCCACAGACATCCACATGGAATGGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR GCA 90 bp | TGTTCCATTCCATGTGGATGTCTGTGGCCCATGTGGATTCCAGTGGTCTGTGCTTTCCATGAAACTCTTTaGCTCAGGACTGCTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CSIPCGCLWPMWIPVVCAFHETL*LRTASR Trigger: CCTGGAAGCAGTCCTGAGGCAAAGAGTTTCATGGAA...AGCACAGACCACTGGAATCCACATGGGCCACAGACATCCACATGGAATGGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR CCA 90 bp | CCTACCATGGGCCTCCAGCCTGGAGCCTCCACACTGCTTGTACTTCTGGTAGAACCACTGTTGAAAAGCTaGGTCATTATGAGTTATTCC | + |
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Preference number: 2 (lower is better) Translates to: PTMGLQPGASTLLVLLVEPLLKS*VIMSYS Trigger: GGAATAACTCATAATGACCCAGCTTTTCAACAGTGG...TTCTACCAGAAGTACAAGCAGTGTGGAGGCTCCAGGCTGGAGGCCCATGGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR TCA 90 bp | CTATGGGTATGCCAAGGTTCCAGGAGGCTAAGTTTCCATGAAACTCTTTGCCTCCCTTTAATGCCTTTATaGAGGCTGGAGGCTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LWVCQGSRRLSFHETLCLPLMPL*RLEAGG Trigger: TCCTCCAGCCTCCAGCCTTCATAAAGGCATTAAAGG...GAGGCAAAGAGTTTCATGGAAACTTAGCCTCCTGGAACCTTGGCATACCCATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR GCA 90 bp | ACCACAACCCACCTATTTCCTAGGCCATTGTGCATTCCCTTGTATGGGTGTGACAACAAGAGATTCAAGTaGTTCGCTGAGAGTGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TTTHLFPRPLCIPLYGCDNKRFK*FAESGG Trigger: CCCACCACTCTCAGCGAAGCACTTGAATCTCTTGTT...GTCACACCCATACAAGGGAATGCACAATGGCCTAGGAAATAGGTGGGTTGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAGTGGTGGGGTATGCCTTTAATGCCTTTATGAAGGCTGGAGGCTGGAGGAACATGAGCAACAAGTaGACCATTGCCATTATGATC | + |
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Preference number: 2 (lower is better) Translates to: LRVVGYAFNAFMKAGGWRNMSNK*TIAIMI Trigger: GATCATAATGGCAATGGTTCACTTGTTGCTCATGTT...CCTCCAGCCTCCAGCCTTCATAAAGGCATTAAAGGCATACCCCACCACTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR TCA 90 bp | CACATTGTGCAAAATTTTCAAATAAGTGCTGCAGATGGACCTCAGTCGGGTCCTTCTAGGCCTGTCACTTaGGTCACTACTGGAGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: HIVQNFQISAADGPQSGPSRPVT*VTTGVD Trigger: ATCCACTCCAGTAGTGACTCAAGTGACAGGCCTAGA...AGGACCCGACTGAGGTCCATCTGCAGCACTTATTTGAAAATTTTGCACAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR CCA 90 bp | CTATGGGTATGCCAAGGTTCCAGGAGGCTAAGTTTCCATGAAACTCTTTGCCTCGTAGCTGTATTACTGTaGGAATGGGCTTTAAGACCC | + |
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Preference number: 2 (lower is better) Translates to: LWVCQGSRRLSFHETLCLVAVLL*EWALRP Trigger: GGGTCTTAAAGCCCATTCCCACAGTAATACAGCTAC...GAGGCAAAGAGTTTCATGGAAACTTAGCCTCCTGGAACCTTGGCATACCCATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR TCA 90 bp | CACATTGTGCAAAATTTTCAAATAAGTGCTGCAGATGGACCTCAGTCGGGTCCTAATGGACTGACCCTTTaGAACTGTAAGCCTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: HIVQNFQISAADGPQSGPNGLTL*NCKPVP Trigger: TGGGACAGGCTTACAGTTTCAAAGGGTCAGTCCATT...AGGACCCGACTGAGGTCCATCTGCAGCACTTATTTGAAAATTTTGCACAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR GCA 90 bp | ACCACATGGACTACTTCTCAACAGACAAAAAGCTTCTCACTAACTGCTGTCAGCCTGAACAATGCTACTTaGTTTGGCCACAAGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: TTWTTSQQTKSFSLTAVSLNNAT*FGHKKG Trigger: CCCTTTCTTGTGGCCAAAGCAAGTAGCATTGTTCAG...GCTGACAGCAGTTAGTGAGAAGCTTTTTGTCTGTTGAGAAGTAGTCCATGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR CCA 90 bp | CTATGGGTATGCCAAGGTTCCAGGAGGCTAAGTTTCCATGAAACTCTTTGCCTCCTTATAAGATTACCTTaGTCATGGTGTCTGTTCACG | + |
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Preference number: 2 (lower is better) Translates to: LWVCQGSRRLSFHETLCLLIRLP*SWCLFT Trigger: CGTGAACAGACACCATGACCAAGGTAATCTTATAAG...GAGGCAAAGAGTTTCATGGAAACTTAGCCTCCTGGAACCTTGGCATACCCATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGCTCACAAAAAGAGTGATGAGGTGCTGTCGTGTAGGTCTTCACAGTGGACTCTCTGAGCTGTATTaGTTCTGTGCCACAAATTAT | + |
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Preference number: 2 (lower is better) Translates to: EKLTKRVMRCCRVGLHSGLSELY*FCATNY Trigger: ATAATTTGTGGCACAGAATCAATACAGCTCAGAGAG...TCCACTGTGAAGACCTACACGACAGCACCTCATCACTCTTTTTGTGAGCTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR GCA 90 bp | CCAAGACAGGGTTACATAGAGTGGATCTATCTCAAGAGGGGGAAAAGTAATTTGTGTCAGCCTGAACAATaGTACTTGCTTTGGCCACAA | + |
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Preference number: 2 (lower is better) Translates to: PRQGYIEWIYLKRGKSNLCQPEQ*YLLWPQ Trigger: TTGTGGCCAAAGCAAGTAGCATTGTTCAGGCTGACA...CAAATTACTTTTCCCCCTCTTGAGATAGATCCACTCTATGTAACCCTGTCTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR CCA 90 bp | ACTAACCCTTTTATGAATAATACTACAGTTCCTCCTAAGACCACAACCCACCTATGCCTTTATGAAGGCTaGAGGCTGGAGGATCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: TNPFMNNTTVPPKTTTHLCLYEG*RLEDLC Trigger: ACAGAGATCCTCCAGCCTCCAGCCTTCATAAAGGCA...TAGGTGGGTTGTGGTCTTAGGAGGAACTGTAGTATTATTCATAAAAGGGTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 90 bp | CTTGCTTTGGCCACAAGAAAGGGTGGAAATAGAAGCAGACCACTGTaGAAAAGCTGGGTCATTATGAGTTATTCCACTCTTTCTTACCTT | + |
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Preference number: 2 (lower is better) Translates to: LALATRKGGNRSRPL*KSWVIMSYSTLSYL Trigger: AAGGTAAGAAAGAGTGGAATAACTCATAATGACCCAGCTTTTCAACAGTGGTCTGCTTCTATTTCCACCCTTTCTTGTGGCCAAAGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 90 bp | TCTCTGAGCTGTATTGATTCTGTGCCACAAATTATCAGCTTAATTTaGTCATGGCAGCACATGCTGTGGTACTTAGCATACACTGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SLSCIDSVPQIISLI*SWQHMLWYLAYTAS Trigger: TGAGGCAGTGTATGCTAAGTACCACAGCATGTGCTGCCATGACAAAATTAAGCTGATAATTTGTGGCACAGAATCAATACAGCTCAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR TCA 90 bp | CATGTTTTGTGTTGGCTTATAGATATGCTGTTGTTGTCTGTGAAATACACCAGGCCTTCAGGATGGATATaGGAGCAAAGAAGGTCATGC | + |
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Preference number: 2 (lower is better) Translates to: HVLCWLIDMLLLSVKYTRPSGWI*EQRRSC Trigger: GCATGACCTTCTTTGCTCTCATATCCATCCTGAAGG...CCTGGTGTATTTCACAGACAACAACAGCATATCTATAAGCCAACACAAAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR TCA 90 bp | CCAAGACAGGGTTACATAGAGTGGATCTATCTCAAGAGGGGGAAAAGTAATTTGTGCTGTTGTTGTCTGTaGAATACACCAGGTTACATG | + |
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Preference number: 2 (lower is better) Translates to: PRQGYIEWIYLKRGKSNLCCCCL*NTPGYM Trigger: CATGTAACCTGGTGTATTTCACAGACAACAACAGCA...CAAATTACTTTTCCCCCTCTTGAGATAGATCCACTCTATGTAACCCTGTCTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCCCAATTATATGCTGTTCTTATAAGATTACCTTGGTCATGGTGTCTGTTGAGCAAAGAAGGTCATaGCCAAGAGCTACAAACATG | + |
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Preference number: 2 (lower is better) Translates to: PVPIICCSYKITLVMVSVEQRRS*PRATNM Trigger: CATGTTTGTAGCTCTTGGGCATGACCTTCTTTGCTC...AACAGACACCATGACCAAGGTAATCTTATAAGAACAGCATATAATTGGGACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR-3UTR CCA 90 bp | ACTAACCCTTTTATGAATAATACTACAGTTCCTCCTAAGACCACAACCCACCTAGTATTACTGTGGGAATaGGCTTTAAGACCCCCATGT | + |
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Preference number: 2 (lower is better) Translates to: TNPFMNNTTVPPKTTTHLVLLWE*ALRPPC Trigger: ACATGGGGGTCTTAAAGCCCATTCCCACAGTAATAC...TAGGTGGGTTGTGGTCTTAGGAGGAACTGTAGTATTATTCATAAAAGGGTTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 90 bp | ATCCACAGCAGGCATGTTTTGTGTTGGCTTATAGATATGCTGTTGTaGTCTGTGAAATACACCAGGTTACATGATGCATATTGCTTACTG | + |
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Preference number: 2 (lower is better) Translates to: IHSRHVLCWLIDMLL*SVKYTRLHDAYCLL Trigger: CAGTAAGCAATATGCATCATGTAACCTGGTGTATTTCACAGACAACAACAGCATATCTATAAGCCAACACAAAACATGCCTGCTGTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 90 bp | GCTATCCACAGCAGGCATGTTTTGTGTTGGCTTATAGATATGCTGTaGTTGTCTGTGAAATACACCAGGTTACATGATGCATATTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: AIHSRHVLCWLIDML*LSVKYTRLHDAYCL Trigger: TAAGCAATATGCATCATGTAACCTGGTGTATTTCACAGACAACAACAGCATATCTATAAGCCAACACAAAACATGCCTGCTGTGGATAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTGTCCCAATTATATGCTGTTCTTATAAGATTACCTTGGTCATGGTGTCTGTTCAAGAGCTACAAACATaGGCAACAAGTGAACCATTG | + |
|
Preference number: 2 (lower is better) Translates to: PVPIICCSYKITLVMVSVQELQT*ATSEPL Trigger: CAATGGTTCACTTGTTGCTCATGTTTGTAGCTCTTG...AACAGACACCATGACCAAGGTAATCTTATAAGAACAGCATATAATTGGGACAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGTTACATAGAGTGGATCTATCTCAAGAGGGGGAAAAGTAATTTGAATTTTCAATGCTACTTGCTTTaGCCACAAGAAAGGGTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QGYIEWIYLKRGKSNLNFQCYLL*PQERVE Trigger: TTCCACCCTTTCTTGTGGCCAAAGCAAGTAGCATTG...AAAATTCAAATTACTTTTCCCCCTCTTGAGATAGATCCACTCTATGTAACCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGTTACATAGAGTGGATCTATCTCAAGAGGGGGAAAAGTAATTTGAATTTTTCAAGTCAGCAACATTaGTTTCACATGTTTTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: QGYIEWIYLKRGKSNLNFSSQQH*FHMFCP Trigger: GGGACAAAACATGTGAAACCAATGTTGCTGACTTGA...AAAATTCAAATTACTTTTCCCCCTCTTGAGATAGATCCACTCTATGTAACCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CCA 72 bp | TTCCATGTGGATGTCTGTGGCCCATGTGGATTCCAGTaGTCTGTGCTGCAGCTGAGTGCCACGTTGGCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: FHVDVCGPCGFQ*SVLQLSATLAS Trigger: GGACGCCAACGTGGCACTCAGCTGCAGCACAGACCACTGGAATCCACATGGGCCACAGACATCCACATGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR GCA 72 bp | GATGAAGATGTTGAACTCTCAGATCCTCCTGCACCATaGCTGCCAGGACACTGCCGCGCTCCCCCAAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: DEDVELSDPPAP*LPGHCRAPPNW Trigger: CCAATTTGGGGGAGCGCGGCAGTGTCCTGGCAGGCATGGTGCAGGAGGATCTGAGAGTTCAACATCTTCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR TCA 72 bp | GTGGCCCATGTGGATTCCAGTGGTCTGTGCTGCAGCTaGGTGCCACGTTGGCGTCCATTGAAAAGCTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: VAHVDSSGLCCS*VPRWRPLKSSQ Trigger: TTGTGAGCTTTTCAATGGACGCCAACGTGGCACTCAGCTGCAGCACAGACCACTGGAATCCACATGGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTACCATGGGCCTCCAGCCTGGAGCCTCCACACTGCTTGTACTTCTGGTAGAAAGGATCTCTGTGAGTTaGAGGCTAGCTGGGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: PTMGLQPGASTLLVLLVERISVS*RLAGST Trigger: TGTAGACCCAGCTAGCCTCAAACTCACAGAGATCCT...TTCTACCAGAAGTACAAGCAGTGTGGAGGCTCCAGGCTGGAGGCCCATGGTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR TCA 72 bp | GTCTGTGCTGCAGCTGAGTGCCACGTTGGCGTCCATTaGAAAGCTCACAAAAAGAGTGATGAGGTGCTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: VCAAAECHVGVH*KAHKKSDEVLS Trigger: CGACAGCACCTCATCACTCTTTTTGTGAGCTTTTCAATGGACGCCAACGTGGCACTCAGCTGCAGCACAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CCA 72 bp | AGTTCGTGTTGCTGTTCCATTCCATGTGGATGTCTGTaGCCCATGTGGATTCCAGTGGTCTGTGCTGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SSCCCSIPCGCL*PMWIPVVCAAA Trigger: AGCTGCAGCACAGACCACTGGAATCCACATGGGCCACAGACATCCACATGGAATGGAACAGCAACACGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTACCATGGGCCTCCAGCCTGGAGCCTCCACACTGCTTGTACTTCTGGTAGAAAGAAGCAGACCACTGTaGAAAAGCTGGGTCATTATG | + |
|
Preference number: 3 (lower is better) Translates to: PTMGLQPGASTLLVLLVERSRPL*KSWVIM Trigger: CATAATGACCCAGCTTTTCAACAGTGGTCTGCTTCT...TTCTACCAGAAGTACAAGCAGTGTGGAGGCTCCAGGCTGGAGGCCCATGGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CCA 72 bp | GGGTATGCCTTTAATGCCTTTATGAAGGCTGGAGGCTaGAGGATCTCTGTGAGTTTGAGGCTAGCTGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GYAFNAFMKAGG*RISVSLRLAGS Trigger: AGACCCAGCTAGCCTCAAACTCACAGAGATCCTCCAGCCTCCAGCCTTCATAAAGGCATTAAAGGCATACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR GCA 72 bp | CAAGGTTCCAGGAGGCTAAGTTTCCATGAAACTCTTTaGCTCAGGACTGCTTCCAGGTTTCTAGGCCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QGSRRLSFHETL*LRTASRFLGLS Trigger: TGACAGGCCTAGAAACCTGGAAGCAGTCCTGAGGCAAAGAGTTTCATGGAAACTTAGCCTCCTGGAACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR GCA 72 bp | ACAGTCAGGGAACATGGTGATGTCAGTAGTTCGTGTTaGTGTTCCATTCCATGTGGATGTCTGTGGCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: TVREHGDVSSSC*CSIPCGCLWPM Trigger: CATGGGCCACAGACATCCACATGGAATGGAACAGCAACACGAACTACTGACATCACCATGTTCCCTGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CCA 72 bp | ACGGATCCATACACCAGACTAATGCAGGGACAGGTTTaGAGTATAGGTGCTATGGGTATGCCAAGGTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TDPYTRLMQGQV*SIGAMGMPRFQ Trigger: CTGGAACCTTGGCATACCCATAGCACCTATACTCCAAACCTGTCCCTGCATTAGTCTGGTGTATGGATCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR TCA 72 bp | ATGGGTATGCCAAGGTTCCAGGAGGCTAAGTTTCCATaGAACTCTTTGCCTCAGGACTGCTTCCAGGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: MGMPRFQEAKFP*NSLPQDCFQVS Trigger: AGAAACCTGGAAGCAGTCCTGAGGCAAAGAGTTTCATGGAAACTTAGCCTCCTGGAACCTTGGCATACCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR GCA 72 bp | ATTTGGGCACATTGTGCAAAATTTTCAAATAAGTGCTaGAGATGGACCTCAGTCGGGTCCTCGATCCGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: IWAHCAKFSNKC*RWTSVGSSIRS Trigger: GCTGCGGATCGAGGACCCGACTGAGGTCCATCTGCAGCACTTATTTGAAAATTTTGCACAATGTGCCCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR GCA 72 bp | GTGATTTGGGCACATTGTGCAAAATTTTCAAATAAGTaGTGCAGATGGACCTCAGTCGGGTCCTCGATCCGC | + |
|
Preference number: 3 (lower is better) Translates to: VIWAHCAKFSNK*CRWTSVGSSIR Trigger: GCGGATCGAGGACCCGACTGAGGTCCATCTGCAGCACTTATTTGAAAATTTTGCACAATGTGCCCAAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CCA 72 bp | TCAGGGTTCTGGTTACAGGCGAGCAAGGAGTTGGCTTaGATGACAAATACGGACACAGAGAAAGTGTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: SGFWLQASKELA*MTNTDTEKVCI Trigger: GATACACACTTTCTCTGTGTCCGTATTTGTCATCCAAGCCAACTCCTTGCTCGCCTGTAACCAGAACCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCCATTCCATGTGGATGTCTGTGGCCCATGTGGATTCCAGTGGTCTGTGCTTGGTTTGAATATGCTTaGCCCAGAGAGTACCACTAT | + |
|
Preference number: 3 (lower is better) Translates to: CSIPCGCLWPMWIPVVCAWFEYA*PREYHY Trigger: ATAGTGGTACTCTCTGGGCAAAGCATATTCAAACCA...AGCACAGACCACTGGAATCCACATGGGCCACAGACATCCACATGGAATGGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR TCA 72 bp | ACACTGCCGCGCTCCCCCAAATTGGTGATAATGGACTaGCCCTTTGAAACTGTAAGCCTGTCCCAATTATAT | + |
|
Preference number: 3 (lower is better) Translates to: TLPRSPKLVIMD*PFETVSLSQLY Trigger: ATATAATTGGGACAGGCTTACAGTTTCAAAGGGTCAGTCCATTATCACCAATTTGGGGGAGCGCGGCAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR TCA 72 bp | ATCTCTGTGAGTTTGAGGCTAGCTGGGTCTACACAGTaGGTTCTAGCCAAGACAGGGTTACATAGAGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: ISVSLRLAGSTQ*VLAKTGLHRVD Trigger: ATCCACTCTATGTAACCCTGTCTTGGCTAGAACTCACTGTGTAGACCCAGCTAGCCTCAAACTCACAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR TCA 72 bp | GGTTCTGGTTACAGGCGAGCAAGGAGTTGGCTTGGATaGCAAATACGGACACAGAGAAAGTGTGTATCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GSGYRRARSWLG*QIRTQRKCVSE Trigger: TTCAGATACACACTTTCTCTGTGTCCGTATTTGTCATCCAAGCCAACTCCTTGCTCGCCTGTAACCAGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CCA 72 bp | ACTAACTGCTGTCAGCCTGAACAATGCTACTTGCTTTaGCCACAAGAAAGGGTGGAAATAGAAGCAGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: TNCCQPEQCYLL*PQERVEIEADH Trigger: GTGGTCTGCTTCTATTTCCACCCTTTCTTGTGGCCAAAGCAAGTAGCATTGTTCAGGCTGACAGCAGTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CCA 72 bp | AGCACTGGAGAGGTAGAAGAAGGGAGATCAAAAATGTaGGAGATCTGTAAGAATGTGGGCAGTTCCAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: STGEVEEGRSKM*EICKNVGSSRV Trigger: TACCCTGGAACTGCCCACATTCTTACAGATCTCCCACATTTTTGATCTCCCTTCTTCTACCTCTCCAGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAGCTCACAAAAAGAGTGATGAGGTGCTGTCGTGTAGGTCTTCACAGTGGACTTCAGATGAAGATGTaGAACTCTCAGATCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: EKLTKRVMRCCRVGLHSGLQMKM*NSQILL Trigger: CAGGAGGATCTGAGAGTTCAACATCTTCATCTGAAG...TCCACTGTGAAGACCTACACGACAGCACCTCATCACTCTTTTTGTGAGCTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR TCA 72 bp | GCGCTCCCCCAAATTGGTGATAATGGACTGACCCTTTaGAACTGTAAGCCTGTCCCAATTATATGCTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ALPQIGDNGLTL*NCKPVPIICCS Trigger: AGAACAGCATATAATTGGGACAGGCTTACAGTTTCAAAGGGTCAGTCCATTATCACCAATTTGGGGGAGCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CCA 72 bp | CTTGTACTTCTGGTAGAAGGACAGTGTTGGACAAGATaGAGAATGGCTTATTGTCTCAATTGGGTAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVLLVEGQCWTR*RMAYCLNWVAL Trigger: CAGGGCTACCCAATTGAGACAATAAGCCATTCTCCATCTTGTCCAACACTGTCCTTCTACCAGAAGTACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR GCA 72 bp | GACTACTTCTCAACAGACAAAAAGCTTCTCACTAACTaGTGTCAGCCTGAACAATGCTACTTGCTTTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: DYFSTDKKLLTN*CQPEQCYLLWP Trigger: TGGCCAAAGCAAGTAGCATTGTTCAGGCTGACAGCAGTTAGTGAGAAGCTTTTTGTCTGTTGAGAAGTAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CCA 72 bp | TCCACACTGCTTGTACTTCTGGTAGAAGGACAGTGTTaGACAAGATGGAGAATGGCTTATTGTCTCAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: STLLVLLVEGQC*TRWRMAYCLNW Trigger: CCAATTGAGACAATAAGCCATTCTCCATCTTGTCCAACACTGTCCTTCTACCAGAAGTACAAGCAGTGTGGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAGCTCACAAAAAGAGTGATGAGGTGCTGTCGTGTAGGTCTTCACAGTGGAATCAAGTCAGCAACATaGGTTTCACATGTTTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: EKLTKRVMRCCRVGLHSGIKSAT*VSHVLS Trigger: GGACAAAACATGTGAAACCAATGTTGCTGACTTGAT...TCCACTGTGAAGACCTACACGACAGCACCTCATCACTCTTTTTGTGAGCTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR GCA 72 bp | AAAAAGCTTCTCACTAACTGCTGTCAGCCTGAACAATaGTACTTGCTTTGGCCACAAGAAAGGGTGGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: KKLLTNCCQPEQ*YLLWPQERVEI Trigger: TATTTCCACCCTTTCTTGTGGCCAAAGCAAGTAGCATTGTTCAGGCTGACAGCAGTTAGTGAGAAGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CCA 72 bp | ATTATCAGCTTAATTTTGTCATGGCAGCACATGCTGTaGTACTTAGCATACACTGCCTCAGCCTTCTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: IISLILSWQHML*YLAYTASAFCC Trigger: ACAACAGAAGGCTGAGGCAGTGTATGCTAAGTACCACAGCATGTGCTGCCATGACAAAATTAAGCTGATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR TCA 72 bp | GGTTTGAATATGCTTTGCCCAGAGAGTACCACTATTTaGAGGTATGGCCTTGTTAGAGTAGCTGTATTACTG | + |
|
Preference number: 3 (lower is better) Translates to: GLNMLCPESTTI*RYGLVRVAVLL Trigger: CAGTAATACAGCTACTCTAACAAGGCCATACCTTCAAATAGTGGTACTCTCTGGGCAAAGCATATTCAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR TCA 72 bp | ATGCACCAGGGGAATTCCATTCTACTAACCCTTTTATaGATAATACTACAGTTCCTCCTAAGACCACAACCC | + |
|
Preference number: 3 (lower is better) Translates to: MHQGNSILLTLL*IILQFLLRPQP Trigger: GGGTTGTGGTCTTAGGAGGAACTGTAGTATTATTCATAAAAGGGTTAGTAGAATGGAATTCCCCTGGTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR GCA 72 bp | CCCAAGAGCTACAAACATGAGCAACAAGTGAACCATTaGCATTATGATCCAGTAACATTACTGAGGTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PKSYKHEQQVNH*HYDPVTLLRCL Trigger: CAAACACCTCAGTAATGTTACTGGATCATAATGGCAATGGTTCACTTGTTGCTCATGTTTGTAGCTCTTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR GCA 72 bp | GAGGTCACCATAGCCTCTGAACATATATGTGATGTTTaGTCTCTGAGCTGTATTGATTCTGTGCCACAAATT | + |
|
Preference number: 3 (lower is better) Translates to: EVTIASEHICDV*SLSCIDSVPQI Trigger: AATTTGTGGCACAGAATCAATACAGCTCAGAGAGCAAACATCACATATATGTTCAGAGGCTATGGTGACCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR GCA 72 bp | TTGTCTGTGAAATACACCAGGTTACATGATGCATATTaGTTACTGTCTTGTAGGTATGGGAACCAAGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: LSVKYTRLHDAY*LLSCRYGNQGI Trigger: GATACCTTGGTTCCCATACCTACAAGACAGTAAGCAATATGCATCATGTAACCTGGTGTATTTCACAGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CCA 72 bp | AAGGGTGGAAATAGAAGCAGACCACTGTTGAAAAGCTaGGTCATTATGAGTTATTCCACTCTTTCTTACCTT | + |
|
Preference number: 3 (lower is better) Translates to: KGGNRSRPLLKS*VIMSYSTLSYL Trigger: AAGGTAAGAAAGAGTGGAATAACTCATAATGACCCAGCTTTTCAACAGTGGTCTGCTTCTATTTCCACCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR GCA 72 bp | CAAGGACATGATAATAGTGGAGGAGTTTTTAGAGCCTaGACTATCTGTAGAACAACATTTTTAAACAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QGHDNSGGVFRA*TICRTTFLNRQ Trigger: CTGCCTGTTTAAAAATGTTGTTCTACAGATAGTGCAGGCTCTAAAAACTCCTCCACTATTATCATGTCCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGTTACATAGAGTGGATCTATCTCAAGAGGGGGAAAAGTAATTTGAATTTTACATTACTGAGGTGTTaGGAATTATACCTTAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QGYIEWIYLKRGKSNLNFTLLRC*ELYLSD Trigger: GTCACTAAGGTATAATTCCAAACACCTCAGTAATGT...AAAATTCAAATTACTTTTCCCCCTCTTGAGATAGATCCACTCTATGTAACCCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR TCA 72 bp | TTCACTGTCTCTACTAGAGGTAAATTTGAATGTTACTaGATAGGTAACATTCTTACTGAATTCCAAGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FTVSTRGKFECY*IGNILTEFQAQ Trigger: CTGAGCTTGGAATTCAGTAAGAATGTTACCTATTCAGTAACATTCAAATTTACCTCTAGTAGAGACAGTGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| CDS-3UTR TCA 90 bp | CCTACCATGGGCCTCCAGCCTGGAGCCTCCACACTGCTTGTACTTCTGGTAGAACCCATTGCCCAGGACTaGGCTCAGGTAAATGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTMGLQPGASTLLVLLVEPIAQD*AQVNEK Trigger: CTTCTCATTTACCTGAGCTCAGTCCTGGGCAATGGG...TTCTACCAGAAGTACAAGCAGTGTGGAGGCTCCAGGCTGGAGGCCCATGGTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| CDS-3UTR GCA 90 bp | CCTACCATGGGCCTCCAGCCTGGAGCCTCCACACTGCTTGTACTTCTGGTAGAAACAGATCCAAGACCCTaGTGCCAACCGTATGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PTMGLQPGASTLLVLLVETDPRP*CQPYAQ Trigger: TTGTGCATACGGTTGGCAGCAGGGTCTTGGATCTGT...TTCTACCAGAAGTACAAGCAGTGTGGAGGCTCCAGGCTGGAGGCCCATGGTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| CDS-3UTR CCA 90 bp | GGGTCCTCGATCCGCAGCAAAACTCAGGGTTCTGGTTACAGGCGAGCAAGGAGTACCATCTCAATGAGGTaGGTATCCATGCAAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSIRSKTQGSGYRRARSTISMR*VSMQAK Trigger: CTTGGCTTGCATGGATACCCACCTCATTGAGATGGT...ACTCCTTGCTCGCCTGTAACCAGAACCCTGAGTTTTGCTGCGGATCGAGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTACCATGGGCCTCCAGCCTGGAGCCTCCACACTGCTTGTACTTCTGGGTAGATGTAAGTGGCTaGAGCATAAAAGAATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LCLPWASSLEPPHCLYFWVDVSG*SIKECD Trigger: GTCACATTCTTTTATGCTCCAGCCACTTACATCTAC...CCAGAAGTACAAGCAGTGTGGAGGCTCCAGGCTGGAGGCCCATGGTAGGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CAA 72 bp | AGCCAGTCTTCTCCTAGCAGTCTTCAGATGAAGATGTaGAACTCTCAGATCCTCCTGCACCATGCCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQSSPSSLQMKM*NSQILLHHACQ Trigger: CTGGCAGGCATGGTGCAGGAGGATCTGAGAGTTCAACATCTTCATCTGAAGACTGCTAGGAGAAGACTGGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CAA 72 bp | GCTGTGGTACTTAGCATACACTGCCTCAGCCTTCTGTaGTCTCTAGTATCCCGCTATCCACAGCAGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: AVVLSIHCLSLL*SLVSRYPQQAC Trigger: ACATGCCTGCTGTGGATAGCGGGATACTAGAGACAACAGAAGGCTGAGGCAGTGTATGCTAAGTACCACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CAA 72 bp | ACGCCCTTGGATGGTGCATGCAACTTAGAGCAGATGTaGGGAGGTTCTGATGAGAACCCAGCTCCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPLDGACNLEQM*GGSDENPAPSL Trigger: AAGAGAAGGAGCTGGGTTCTCATCAGAACCTCCCAACATCTGCTCTAAGTTGCATGCACCATCCAAGGGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CAA 72 bp | GGATTCCAGTGGTCTGTGCTGCAGCTGAGTGCCACGTaGGCGTCCATTGAAAAGCTCACAAAAAGAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GFQWSVLQLSAT*ASIEKLTKRVM Trigger: CATCACTCTTTTTGTGAGCTTTTCAATGGACGCCAACGTGGCACTCAGCTGCAGCACAGACCACTGGAATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
||
| 3UTR CAA 72 bp | CACGGATCCATACACCAGACTAATGCAGGGACAGGTTaGGAGTATAGGTGCTATGGGTATGCCAAGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGSIHQTNAGTG*EYRCYGYAKVP Trigger: TGGAACCTTGGCATACCCATAGCACCTATACTCCAAACCTGTCCCTGCATTAGTCTGGTGTATGGATCCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| CDS-3UTR TCA 90 bp | TGTTCCATTCCATGTGGATGTCTGTGGCCCATGTGGATTCCAGTGGTCTGTGCTACCGGTCATAAGCCATaGCAACGAAGAAAGTACACT | + |
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Preference number: 4 (lower is better) Translates to: CSIPCGCLWPMWIPVVCATGHKP*QRRKYT Trigger: AGTGTACTTTCTTCGTTGTCATGGCTTATGACCGGT...AGCACAGACCACTGGAATCCACATGGGCCACAGACATCCACATGGAATGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 72 bp | CTTCTCACTAACTGCTGTCAGCCTGAACAATGCTACTaGCTTTGGCCACAAGAAAGGGTGGAAATAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LLTNCCQPEQCY*LWPQERVEIEA Trigger: TGCTTCTATTTCCACCCTTTCTTGTGGCCAAAGCAAGTAGCATTGTTCAGGCTGACAGCAGTTAGTGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| CDS-3UTR CCA 90 bp | AGCCAGTCTTCTCCTAGCAGTCTTCAGATGAAGATGTTGAACTCTCAGATCCTCTCTGAAACCCAACTTTaGTTCTGCTCTGGAATCATC | + |
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Preference number: 4 (lower is better) Translates to: SQSSPSSLQMKMLNSQILSETQL*FCSGII Trigger: GATGATTCCAGAGCAGAACCAAAGTTGGGTTTCAGA...GAGGATCTGAGAGTTCAACATCTTCATCTGAAGACTGCTAGGAGAAGACTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| CDS-3UTR TCA 90 bp | GAAAAGCTCACAAAAAGAGTGATGAGGTGCTGTCGTGTAGGTCTTCACAGTGGAATGGCAGACTCATGGTaGAGAAAGTATGCAATAAAG | + |
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Preference number: 4 (lower is better) Translates to: EKLTKRVMRCCRVGLHSGMADSW*RKYAIK Trigger: CTTTATTGCATACTTTCTTCACCATGAGTCTGCCAT...TCCACTGTGAAGACCTACACGACAGCACCTCATCACTCTTTTTGTGAGCTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| CDS-3UTR GCA 90 bp | CAGGGTTACATAGAGTGGATCTATCTCAAGAGGGGGAAAAGTAATTTGAATTTTCCAAACACATACATCTaGAGCCAGCAGCCAGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QGYIEWIYLKRGKSNLNFPNTYI*SQQPAK Trigger: CTTTGCTGGCTGCTGGCTGCAGATGTATGTGTTTGG...AAAATTCAAATTACTTTTCCCCCTCTTGAGATAGATCCACTCTATGTAACCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 72 bp | TTCTGTTATAGAGTGATGTGGTGGTTTGAATATGCTTaGCCCAGAGAGTACCACTATTTGAAGGTATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: FCYRVMWWFEYA*PREYHYLKVWP Trigger: AGGCCATACCTTCAAATAGTGGTACTCTCTGGGCAAAGCATATTCAAACCACCACATCACTCTATAACAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 72 bp | CTAGTATCCCGCTATCCACAGCAGGCATGTTTTGTGTaGGCTTATAGATATGCTGTTGTTGTCTGTGAAATA | + |
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Preference number: 4 (lower is better) Translates to: LVSRYPQQACFV*AYRYAVVVCEI Trigger: TATTTCACAGACAACAACAGCATATCTATAAGCCAACACAAAACATGCCTGCTGTGGATAGCGGGATACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| CDS-3UTR CCA 90 bp | ACTAACCCTTTTATGAATAATACTACAGTTCCTCCTAAGACCACAACCCACCTAGACAGTATAGCGCAATaGATAGCATATGGCCACATA | + |
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Preference number: 4 (lower is better) Translates to: TNPFMNNTTVPPKTTTHLDSIAQ*IAYGHI Trigger: TATGTGGCCATATGCTATCCATTGCGCTATACTGTC...TAGGTGGGTTGTGGTCTTAGGAGGAACTGTAGTATTATTCATAAAAGGGTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 72 bp | AGCAGGCATGTTTTGTGTTGGCTTATAGATATGCTGTaGTTGTCTGTGAAATACACCAGGTTACATGATGCA | + |
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Preference number: 4 (lower is better) Translates to: SRHVLCWLIDML*LSVKYTRLHDA Trigger: TGCATCATGTAACCTGGTGTATTTCACAGACAACAACAGCATATCTATAAGCCAACACAAAACATGCCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 72 bp | AGGCATGTTTTGTGTTGGCTTATAGATATGCTGTTGTaGTCTGTGAAATACACCAGGTTACATGATGCATAT | + |
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Preference number: 4 (lower is better) Translates to: RHVLCWLIDMLL*SVKYTRLHDAY Trigger: ATATGCATCATGTAACCTGGTGTATTTCACAGACAACAACAGCATATCTATAAGCCAACACAAAACATGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| 3UTR CAA 72 bp | CTGTTAATCAAGTCAGCAACATTGGTTTCACATGTTTaGTCCCAATTACTAAGTACTACATTGGTTCAAATG | + |
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Preference number: 4 (lower is better) Translates to: LLIKSATLVSHV*SQLLSTTLVQM Trigger: CATTTGAACCAATGTAGTACTTAGTAATTGGGACAAAACATGTGAAACCAATGTTGCTGACTTGATTAACAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| CDS TCA 90 bp | GTAGACCACAGGGTTGAGCAAGGCTGTGAAGGCATTGTAAAAGAGTaGGACCTGCTTGTCTCGCTCAGGGGAGTAGCTGGAGTTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: VDHRVEQGCEGIVKE*DLLVSLRGVAGVGP Trigger: AGGCCCAACTCCAGCTACTCCCCTGAGCGAGACAAGCAGGTCTCACTCTTTTACAATGCCTTCACAGCCTTGCTCAACCCTGTGGTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081960.5 ENSMUST00000215312.3 |
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| CDS TCA 90 bp | AGAGGATGCTGTTGGTCGTGGGGTCACTGGAGAAGCCAATCAGGATaGACTCTGAAACCCAACTTTGGTTCTGCTCTGGAATCATCCACA | + |
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Preference number: 5 (lower is better) Translates to: RGCCWSWGHWRSQSG*TLKPNFGSALESST Trigger: TGTGGATGATTCCAGAGCAGAACCAAAGTTGGGTTTCAGAGTTCATCCTGATTGGCTTCTCCAGTGACCCCACGACCAACAGCATCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| CDS-3UTR CAA 90 bp | CCAAGACAGGGTTACATAGAGTGGATCTATCTCAAGAGGGGGAAAAGTAATTTGCTATGTCCCATCACCTaGAGAAATGCCCTCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: PRQGYIEWIYLKRGKSNLLCPIT*RNALLM Trigger: CATCAAGAGGGCATTTCTCAAGGTGATGGGACATAG...CAAATTACTTTTCCCCCTCTTGAGATAGATCCACTCTATGTAACCCTGTCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| CDS-3UTR CAA 90 bp | CCTGTCCCAATTATATGCTGTTCTTATAAGATTACCTTGGTCATGGTGTCTGTTTGGGTGGACTTGATTTaGAGAATTGCCATGGCAATA | + |
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Preference number: 5 (lower is better) Translates to: PVPIICCSYKITLVMVSVWVDLI*RIAMAI Trigger: TATTGCCATGGCAATTCTCAAAATCAAGTCCACCCA...AACAGACACCATGACCAAGGTAATCTTATAAGAACAGCATATAATTGGGACAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215312.3 |
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| CDS TCA 72 bp | AGGGTTGAGCAAGGCTGTGAAGGCATTGTAAAAGAGTaGGACCTGCTTGTCTCGCTCAGGGGAGTAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RVEQGCEGIVKE*DLLVSLRGVAG Trigger: TCCAGCTACTCCCCTGAGCGAGACAAGCAGGTCTCACTCTTTTACAATGCCTTCACAGCCTTGCTCAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081960.5 ENSMUST00000215312.3 |
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| CDS TCA 72 bp | TGTTGGTCGTGGGGTCACTGGAGAAGCCAATCAGGATaGACTCTGAAACCCAACTTTGGTTCTGCTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: CWSWGHWRSQSG*TLKPNFGSALE Trigger: TTCCAGAGCAGAACCAAAGTTGGGTTTCAGAGTTCATCCTGATTGGCTTCTCCAGTGACCCCACGACCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081960.5 ENSMUST00000215312.3 |
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| CDS TCA 72 bp | AATGAGGTGGGTATCCATGCAAGCCAAGCTACGCACTaGAGGACCTTCACAGAAGTAGTGGTTGACCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: NEVGIHASQATH*RTFTEVVVDPV Trigger: AACAGGGTCAACCACTACTTCTGTGAAGGTCCTTCAGTGCGTAGCTTGGCTTGCATGGATACCCACCTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081960.5 ENSMUST00000215312.3 |
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| CDS GCA 72 bp | CTTGCAGCGCCCCTGGGTGGACTTGATTTTGAGAATTaGCATGGCAATACGAATATAGGAGGCCACAATGAG | + |
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Preference number: 6 (lower is better) Translates to: LAAPLGGLDFEN*HGNTNIGGHNE Trigger: CTCATTGTGGCCTCCTATATTCGTATTGCCATGGCAATTCTCAAAATCAAGTCCACCCAGGGGCGCTGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081960.5 ENSMUST00000215312.3 |
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