Pregenerated sensors for OLFR1325 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051706Ensembl transcript IDs: ENSMUST00000054541.3, ENSMUST00000216007.2, ENSMUST00000216108.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAATTGCTTATACAGCATTGCTACATGAAAGTGCATCTTCATATTaGTTCTGCAGGAGATTGCCTAACAGGAGAGCTGACCAACAGAGT | + |
|
Preference number: 1 (lower is better) Translates to: SIAYTALLHESASSY*FCRRLPNRRADQQS Trigger: ACTCTGTTGGTCAGCTCTCCTGTTAGGCAATCTCCTGCAGAATCAATATGAAGATGCACTTTCATGTAGCAATGCTGTATAAGCAATTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR CCA 90 bp | TATCAGGCTTGCAAATATACCAATCTATTCTCTAAGCAGCCGATTTaGAAGATATTTGTCATCTGGGGACCATGTTCCAAACAAATGGGT | + |
|
Preference number: 1 (lower is better) Translates to: YQACKYTNLFSKQPI*KIFVIWGPCSKQMG Trigger: ACCCATTTGTTTGGAACATGGTCCCCAGATGACAAATATCTTCCAAATCGGCTGCTTAGAGAATAGATTGGTATATTTGCAAGCCTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCCCCAAAATCATTAAGCTATGTAATAGTGGCAGGAAGGGCATGCCAGCAGTGTGGCTTCTGAGAGGTTaGATAAGCAAACAGAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: TPKIIKLCNSGRKGMPAVWLLRG*ISKQRF Trigger: GAACCTCTGTTTGCTTATTCAACCTCTCAGAAGCCA...CACTGCTGGCATGCCCTTCCTGCCACTATTACATAGCTTAATGATTTTGGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGTGAGAAGTAATTCTGGGATGAAGTCTCTGAGGTCCCTGTGTTTCAGAGAGAAGATTCTTCTAGATTaGGAAGGATCCAGAGGCATG | + |
|
Preference number: 2 (lower is better) Translates to: AVRSNSGMKSLRSLCFREKILLD*EGSRGM Trigger: CATGCCTCTGGATCCTTCTCAATCTAGAAGAATCTT...CTCTCTGAAACACAGGGACCTCAGAGACTTCATCCCAGAATTACTTCTCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCTGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAATGTCCTCAGCCCTATaGTGTTTACAATTTTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: PCVSESTITAMQNSGPSSMSSAL*CLQFSI Trigger: GATGGAAAATTGTAAACATCATAGGGCTGAGGACAT...TGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCAGCAGTGAGAAGTAATTCTGGGATGAAGTCTCTGAGGTCCCTGTGTTTCAGAATAAGAAACTCATaGTGGTATGGGCATTCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: MPAVRSNSGMKSLRSLCFRIRNS*WYGHSS Trigger: GCTAGAATGCCCATACCACCATGAGTTTCTTATTCT...GAAACACAGGGACCTCAGAGACTTCATCCCAGAATTACTTCTCACTGCTGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR CAA 90 bp | GGCCTCGTTCCTAACCTAGAAGGAATGCTTTCCTTGAATGCAAATTaGTTCCAAACCTGCTTTCTTTTCTTAGTTCAATTAGCCCACGAC | + |
|
Preference number: 2 (lower is better) Translates to: GLVPNLEGMLSLNAN*FQTCFLFLVQLAHD Trigger: GTCGTGGGCTAATTGAACTAAGAAAAGAAAGCAGGTTTGGAACAAATTTGCATTCAAGGAAAGCATTCCTTCTAGGTTAGGAACGAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGAGAAGTAATTCTGGGATGAAGTCTCTGAGGTCCCTGTGTTTCAGAGAGACTTTGGTCCTCATGTaGAGCTTGCATTTTAATTTT | + |
|
Preference number: 2 (lower is better) Translates to: AVRSNSGMKSLRSLCFRETLVLM*SLHFNF Trigger: AAAATTAAAATGCAAGCTCCACATGAGGACCAAAGT...CTCTCTGAAACACAGGGACCTCAGAGACTTCATCCCAGAATTACTTCTCACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAGAAGATGTTTGTACCCTTTaGCCATTTTCCAACTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: CVSESTITAMQNSGPSSEDVCTL*PFSNWN Trigger: ATTCCAGTTGGAAAATGGCCAAAGGGTACAAACATC...TTCTGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCCCCAAAATCATTAAGCTATGTAATAGTGGCAGGAAGGGCATGCCAGCAGTGTTACAAAGTAGCCTGTaGTATAGTACAGTACTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: TPKIIKLCNSGRKGMPAVLQSSL*YSTVLF Trigger: GAAAAGTACTGTACTATACCACAGGCTACTTTGTAA...CACTGCTGGCATGCCCTTCCTGCCACTATTACATAGCTTAATGATTTTGGGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAGAATGTTCTTTACAGAATTaGATGTTTGTACCCTTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: CVSESTITAMQNSGPSSECSLQN*MFVPFG Trigger: GCCAAAGGGTACAAACATCCAATTCTGTAAAGAACA...TTCTGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTCAATTAGCCCACGACACAGGAAGGTTTACAGAGCTCTATTTGCAGCTTTTAAGAATAAGAAACTCATaGTGGTATGGGCATTCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: VQLAHDTGRFTELYLQLLRIRNS*WYGHSS Trigger: GCTAGAATGCCCATACCACCATGAGTTTCTTATTCT...TAAAAGCTGCAAATAGAGCTCTGTAAACCTTCCTGTGTCGTGGGCTAATTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR CAA 90 bp | TTACCAGATAGTGGCCTCGTTCCTAACCTAGAAGGAATGCTTTCCTaGAATGCAAATTTGTTCCAAACCTGCTTTCTTTTCTTAGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LPDSGLVPNLEGMLS*NANLFQTCFLFLVQ Trigger: TTGAACTAAGAAAAGAAAGCAGGTTTGGAACAAATTTGCATTCAAGGAAAGCATTCCTTCTAGGTTAGGAACGAGGCCACTATCTGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAGAAAACTACTTTGGTCCTCATGTaGAGCTTGCATTTTAATTTT | + |
|
Preference number: 2 (lower is better) Translates to: FQRALSQPCKIVGHHQKTTLVLM*SLHFNF Trigger: AAAATTAAAATGCAAGCTCCACATGAGGACCAAAGT...AGTTTTCTGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CCA 90 bp | CAATTTAACAACATGCTAATTTCATCTCCAGCCCTAAGAGGCATCACAACTATCGATGTTTGTACCCTTTaGCCATTTTCCAACTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: QFNNMLISSPALRGITTIDVCTL*PFSNWN Trigger: ATTCCAGTTGGAAAATGGCCAAAGGGTACAAACATC...GATAGTTGTGATGCCTCTTAGGGCTGGAGATGAAATTAGCATGTTGTTAAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTTCTTAGTTCAATTAGCCCACGACACAGGAAGGTTTACAGAGCTCTATTTTCTAAGCAGCCGATTTaGAAGATATTTGTCATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SFLSSISPRHRKVYRALFSKQPI*KIFVIW Trigger: CCAGATGACAAATATCTTCCAAATCGGCTGCTTAGA...AAATAGAGCTCTGTAAACCTTCCTGTGTCGTGGGCTAATTGAACTAAGAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CCA 90 bp | CAATTTAACAACATGCTAATTTCATCTCCAGCCCTAAGAGGCATCACAACTATCTCTAAGCAGCCGATTTaGAAGATATTTGTCATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QFNNMLISSPALRGITTISKQPI*KIFVIW Trigger: CCAGATGACAAATATCTTCCAAATCGGCTGCTTAGA...GATAGTTGTGATGCCTCTTAGGGCTGGAGATGAAATTAGCATGTTGTTAAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR CAA 90 bp | TTAGTTCAATTAGCCCACGACACAGGAAGGTTTACAGAGCTCTATTaGCAGCTTTTATTCTATATGGGACTTGAGATTACTTGTATCAAT | + |
|
Preference number: 2 (lower is better) Translates to: LVQLAHDTGRFTELY*QLLFYMGLEITCIN Trigger: ATTGATACAAGTAATCTCAAGTCCCATATAGAATAAAAGCTGCAAATAGAGCTCTGTAAACCTTCCTGTGTCGTGGGCTAATTGAACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCATAAGCTGATAAGGCTTAAGGAATTACAGCAGAATTGTTTACATGTGTTCTACAGCATTGCTACATaGAAGTGCATCTTCATATTG | + |
|
Preference number: 2 (lower is better) Translates to: CHKLIRLKELQQNCLHVFYSIAT*KCIFIL Trigger: CAATATGAAGATGCACTTTCATGTAGCAATGCTGTA...GAACACATGTAAACAATTCTGCTGTAATTCCTTAAGCCTTATCAGCTTATGACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCATAAGCTGATAAGGCTTAAGGAATTACAGCAGAATTGTTTACATGTGTTCTTACAAAGTAGCCTGTaGTATAGTACAGTACTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: CHKLIRLKELQQNCLHVFLQSSL*YSTVLF Trigger: GAAAAGTACTGTACTATACCACAGGCTACTTTGTAA...GAACACATGTAAACAATTCTGCTGTAATTCCTTAAGCCTTATCAGCTTATGACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR GCA 72 bp | GAGGTCCCTGTGTTTCAGAGAGCACTATCACAGCCATaGAAAATAGTGGGCCATCATCAGAAAACTCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: EVPVFQRALSQP*KIVGHHQKTHL Trigger: CAAGTGAGTTTTCTGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACAGGGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAATGGCTTCTGAGAGGTaGAATAAGCAAACAGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PCVSESTITAMQNSGPSSMASER*NKQTEV Trigger: AACCTCTGTTTGCTTATTCAACCTCTCAGAAGCCAT...TGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAGAAGGATGTTTGTACCCTTaGGCCATTTTCCAACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CVSESTITAMQNSGPSSEGCLYP*AIFQLE Trigger: TTCCAGTTGGAAAATGGCCAAAGGGTACAAACATCC...TTCTGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR TCA 72 bp | GTGAGAAATACCCATTGTCCCAAGATTCTTCTAGATTaGGAAGGATCCAGAGGCATGGTAAGTGACAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VRNTHCPKILLD*EGSRGMVSDSL Trigger: CAAGCTGTCACTTACCATGCCTCTGGATCCTTCTCAATCTAGAAGAATCTTGGGACAATGGGTATTTCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTCAGCATAAGTCAACTTTCTGTACCTTCCTTACTAAATCAGCAGAGGTGATGAACTTGCAAACTTaGGTCCTCATGTGGAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LIQHKSTFCTFLTKSAEVMNLQT*VLMWSL Trigger: CAAGCTCCACATGAGGACCAAAGTTTGCAAGTTCAT...CACCTCTGCTGATTTAGTAAGGAAGGTACAGAAAGTTGACTTATGCTGAATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCAATTAGCCCACGACACAGGAAGGTTTACAGAGCTCTATTTGCAGCTTTTAAAGTGCATCTTCATATaGATTCTGCAGGAGATTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VQLAHDTGRFTELYLQLLKCIFI*ILQEIA Trigger: GGCAATCTCCTGCAGAATCAATATGAAGATGCACTT...TAAAAGCTGCAAATAGAGCTCTGTAAACCTTCCTGTGTCGTGGGCTAATTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR TCA 72 bp | TATACAGCATTGCTACATGAAAGTGCATCTTCATATTaGTTCTGCAGGAGATTGCCTAACAGGAGAGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: YTALLHESASSY*FCRRLPNRRAD Trigger: GTCAGCTCTCCTGTTAGGCAATCTCCTGCAGAATCAATATGAAGATGCACTTTCATGTAGCAATGCTGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAAAAGCTTCATGATATCCTCCATCATAAGGGATCAGAGAAACTCATTCAGGGATGTTTGTACCCTTaGGCCATTTTCCAACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: MKKLHDILHHKGSEKLIQGCLYP*AIFQLE Trigger: TTCCAGTTGGAAAATGGCCAAAGGGTACAAACATCC...CTGAATGAGTTTCTCTGATCCCTTATGATGGAGGATATCATGAAGCTTTTTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAGAAAACTGGGCATTCTAGCTATTaGATGTTCTATAAAATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FQRALSQPCKIVGHHQKTGHSSY*MFYKIG Trigger: GCCTATTTTATAGAACATCAAATAGCTAGAATGCCC...AGTTTTCTGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCATAAGCTGATAAGGCTTAAGGAATTACAGCAGAATTGTTTACATGTGTTCATGAACTTGCAAACTTaGGTCCTCATGTGGAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CHKLIRLKELQQNCLHVFMNLQT*VLMWSL Trigger: CAAGCTCCACATGAGGACCAAAGTTTGCAAGTTCAT...GAACACATGTAAACAATTCTGCTGTAATTCCTTAAGCCTTATCAGCTTATGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR TCA 72 bp | CTTGCCATAGCCTTTCTTAGATGGCTTCTGAGAGGTTaGATAAGCAAACAGAGGTTCACATCAAAAGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: LAIAFLRWLLRG*ISKQRFTSKEI Trigger: AATTTCTTTTGATGTGAACCTCTGTTTGCTTATTCAACCTCTCAGAAGCCATCTAAGAAAGGCTATGGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR CCA 72 bp | TGCAAATATACCAATCTATTCTCTAAGCAGCCGATTTaGAAGATATTTGTCATCTGGGGACCATGTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CKYTNLFSKQPI*KIFVIWGPCSK Trigger: TTTGGAACATGGTCCCCAGATGACAAATATCTTCCAAATCGGCTGCTTAGAGAATAGATTGGTATATTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCATAAGCTGATAAGGCTTAAGGAATTACAGCAGAATTGTTTACATGTGTTCGAAGGAATGCTTTCCTaGAATGCAAATTTGTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: CHKLIRLKELQQNCLHVFEGMLS*NANLFQ Trigger: TTGGAACAAATTTGCATTCAAGGAAAGCATTCCTTC...GAACACATGTAAACAATTCTGCTGTAATTCCTTAAGCCTTATCAGCTTATGACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR CCA 72 bp | TCCAGATTACCTTATTTTCCCAGAATAAGAAACTCATaGTGGTATGGGCATTCTAGCTATTTGATGTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SRLPYFPRIRNS*WYGHSSYLMFY Trigger: ATAGAACATCAAATAGCTAGAATGCCCATACCACCATGAGTTTCTTATTCTGGGAAAATAAGGTAATCTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCCAAAATCATTAAGCTATGTAATAGTGGCAGGAAGGGCATGCCAGCAGTGGAATGGGCAGAACAGTaGGAAGAAGGGCTGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TPKIIKLCNSGRKGMPAVEWAEQ*EEGLPS Trigger: GGATGGCAGCCCTTCTTCTCACTGTTCTGCCCATTC...CACTGCTGGCATGCCCTTCCTGCCACTATTACATAGCTTAATGATTTTGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAGAATGGGCAGAACAGTaGGAAGAAGGGCTGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PCVSESTITAMQNSGPSSEWAEQ*EEGLPS Trigger: GGATGGCAGCCCTTCTTCTCACTGTTCTGCCCATTC...TGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAAGTGAGAAGAAGGGCTaGCATCCAGGCAAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCVSESTITAMQNSGPSSSEKKG*HPGKQS Trigger: GCTTTGCTTGCCTGGATGGCAGCCCTTCTTCTCACT...TGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCACAGAAGACAACACTCTaGGATGTGGGATGCCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCVSESTITAMQNSGPSSQKTTL*DVGCLE Trigger: CTCTAGGCATCCCACATCCCAGAGTGTTGTCTTCTG...TGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAAAATCATTAAGCTATGTAATAGTGGCAGGAAGGGCATGCCAGCAGTGCAGAAGACAACACTCTaGGATGTGGGATGCCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPKIIKLCNSGRKGMPAVQKTTL*DVGCLE Trigger: CTCTAGGCATCCCACATCCCAGAGTGTTGTCTTCTG...CACTGCTGGCATGCCCTTCCTGCCACTATTACATAGCTTAATGATTTTGGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGCAGTGAGAAGTAATTCTGGGATGAAGTCTCTGAGGTCCCTGTGTTTCATTGGTGTGTGCAATTaGGAGTTGCCTCCTACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MPAVRSNSGMKSLRSLCFIGVCN*ELPPTR Trigger: CCTAGTAGGAGGCAACTCTCAATTGCACACACCAAT...GAAACACAGGGACCTCAGAGACTTCATCCCAGAATTACTTCTCACTGCTGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAGAAATTGGTGTGTGCAATTaGGAGTTGCCTCCTACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVSESTITAMQNSGPSSEIGVCN*ELPPTR Trigger: CCTAGTAGGAGGCAACTCTCAATTGCACACACCAAT...TTCTGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCATCTGCCCACAGAAACTaGTTGGAAAGATTAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PCVSESTITAMQNSGPSSSAHRN*LERLEW Trigger: CCATTCTAATCTTTCCAATCAGTTTCTGTGGGCAGA...TGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGCAGTGAGAAGTAATTCTGGGATGAAGTCTCTGAGGTCCCTGTGTTTCGTACTGGCATTGAAATaGCAGCACAAGCTATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: MPAVRSNSGMKSLRSLCFVLALK*QHKLSS Trigger: TGATGATAGCTTGTGCTGTCATTTCAATGCCAGTAC...GAAACACAGGGACCTCAGAGACTTCATCCCAGAATTACTTCTCACTGCTGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCCAAAATCATTAAGCTATGTAATAGTGGCAGGAAGGGCATGCCAGCAGTGGGAGAAGTTATACAATaGATTCACCATGATCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPKIIKLCNSGRKGMPAVGEVIQ*IHHDQG Trigger: CCCTTGATCATGGTGAATTCATTGTATAACTTCTCC...CACTGCTGGCATGCCCTTCCTGCCACTATTACATAGCTTAATGATTTTGGGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR GCA 90 bp | CAATTTAACAACATGCTAATTTCATCTCCAGCCCTAAGAGGCATCACAACTATCCTCTGGGATGTGGGATaGCTAGAGAGTCCCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QFNNMLISSPALRGITTILWDVG*LESPTR Trigger: TCTTGTGGGACTCTCTAGGCATCCCACATCCCAGAG...GATAGTTGTGATGCCTCTTAGGGCTGGAGATGAAATTAGCATGTTGTTAAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCTTAGTTCAATTAGCCCACGACACAGGAAGGTTTACAGAGCTCTATTTAGTGAGAAGAAGGGCTaGCATCCAGGCAAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLSSISPRHRKVYRALFSEKKG*HPGKQS Trigger: GCTTTGCTTGCCTGGATGGCAGCCCTTCTTCTCACT...AAATAGAGCTCTGTAAACCTTCCTGTGTCGTGGGCTAATTGAACTAAGAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCATCAAGGGTACAACACTaGTGGAAAATAGAAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCVSESTITAMQNSGPSSSRVQH*WKIEDP Trigger: TGGATCTTCTATTTTCCACCAGTGTTGTACCCTTGA...TGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAGAAAACTGTACTGGCATTGAAATaGCAGCACAAGCTATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FQRALSQPCKIVGHHQKTVLALK*QHKLSS Trigger: TGATGATAGCTTGTGCTGTCATTTCAATGCCAGTAC...AGTTTTCTGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR GCA 90 bp | TGTCATAAGCTGATAAGGCTTAAGGAATTACAGCAGAATTGTTTACATGTGTTCCTCTGGGATGTGGGATaGCTAGAGAGTCCCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHKLIRLKELQQNCLHVFLWDVG*LESPTR Trigger: TCTTGTGGGACTCTCTAGGCATCCCACATCCCAGAG...GAACACATGTAAACAATTCTGCTGTAATTCCTTAAGCCTTATCAGCTTATGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAGAAAACTCTGGCCTTAGTTGGATaGATTCTTAAAACAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQRALSQPCKIVGHHQKTLALVG*ILKTAL Trigger: CAAGGCTGTTTTAAGAATCCATCCAACTAAGGCCAG...AGTTTTCTGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR CAA 72 bp | CCAATCTATTCTCTAAGCAGCCGATTTGGAAGATATTaGTCATCTGGGGACCATGTTCCAAACAAATGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PIYSLSSRFGRY*SSGDHVPNKWV Trigger: TACCCATTTGTTTGGAACATGGTCCCCAGATGACAAATATCTTCCAAATCGGCTGCTTAGAGAATAGATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAGAAAACTGGAGAAGTTATACAATaGATTCACCATGATCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQRALSQPCKIVGHHQKTGEVIQ*IHHDQG Trigger: CCCTTGATCATGGTGAATTCATTGTATAACTTCTCC...AGTTTTCTGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTCAGAGAGCACTATCACAGCCATGCAAAATAGTGGGCCATCATCAGAAGGTAAGAGAAAAGAATaGACATTAAAGGTACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CVSESTITAMQNSGPSSEGKRKE*TLKVLA Trigger: TGCCAGTACCTTTAATGTTCATTCTTTTCTCTTACC...TTCTGATGATGGCCCACTATTTTGCATGGCTGTGATAGTGCTCTCTGAAACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAATTAGCCCACGACACAGGAAGGTTTACAGAGCTCTATTTGCAGCTTTTAAGGGTACAACACTGGTaGAAAATAGAAGATCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VQLAHDTGRFTELYLQLLRVQHW*KIEDPV Trigger: TACTGGATCTTCTATTTTCCACCAGTGTTGTACCCT...TAAAAGCTGCAAATAGAGCTCTGTAAACCTTCCTGTGTCGTGGGCTAATTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCTTAGTTCAATTAGCCCACGACACAGGAAGGTTTACAGAGCTCTATTTAGGCAAGCAAAGCCATaGAAATACATACTCGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLSSISPRHRKVYRALFRQAKP*KYILEK Trigger: CTTCTCGAGTATGTATTTTCATGGCTTTGCTTGCCT...AAATAGAGCTCTGTAAACCTTCCTGTGTCGTGGGCTAATTGAACTAAGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | CTCATTCAGCATAAGTCAACTTTCTGTACCTTCCTTACTAAATCAGCAGAGGTGTTCTTAAAACAGCCTTaGGGATGCAAAGGTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIQHKSTFCTFLTKSAEVFLKQP*GCKGKR Trigger: TCTCTTACCTTTGCATCCTCAAGGCTGTTTTAAGAA...CACCTCTGCTGATTTAGTAAGGAAGGTACAGAAAGTTGACTTATGCTGAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTTAGTTCAATTAGCCCACGACACAGGAAGGTTTACAGAGCTCTATTTCTGGCCTTAGTTGGATaGATTCTTAAAACAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLSSISPRHRKVYRALFLALVG*ILKTAL Trigger: CAAGGCTGTTTTAAGAATCCATCCAACTAAGGCCAG...AAATAGAGCTCTGTAAACCTTCCTGTGTCGTGGGCTAATTGAACTAAGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR CAA 72 bp | TTAGCCCACGACACAGGAAGGTTTACAGAGCTCTATTaGCAGCTTTTATTCTATATGGGACTTGAGATTACT | + |
|
Preference number: 4 (lower is better) Translates to: LAHDTGRFTELY*QLLFYMGLEIT Trigger: AGTAATCTCAAGTCCCATATAGAATAAAAGCTGCAAATAGAGCTCTGTAAACCTTCCTGTGTCGTGGGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAAAAGCTTCATGATATCCTCCATCATAAGGGATCAGAGAAACTCATTCAGTCTGCCCACAGAAACTaGTTGGAAAGATTAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: MKKLHDILHHKGSEKLIQSAHRN*LERLEW Trigger: CCATTCTAATCTTTCCAATCAGTTTCTGTGGGCAGA...CTGAATGAGTTTCTCTGATCCCTTATGATGGAGGATATCATGAAGCTTTTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | CAATTTAACAACATGCTAATTTCATCTCCAGCCCTAAGAGGCATCACAACTATCGGTAAGAGAAAAGAATaGACATTAAAGGTACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QFNNMLISSPALRGITTIGKRKE*TLKVLA Trigger: TGCCAGTACCTTTAATGTTCATTCTTTTCTCTTACC...GATAGTTGTGATGCCTCTTAGGGCTGGAGATGAAATTAGCATGTTGTTAAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAAAAGCTTCATGATATCCTCCATCATAAGGGATCAGAGAAACTCATTCAGAGGGTACAACACTGGTaGAAAATAGAAGATCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MKKLHDILHHKGSEKLIQRVQHW*KIEDPV Trigger: TACTGGATCTTCTATTTTCCACCAGTGTTGTACCCT...CTGAATGAGTTTCTCTGATCCCTTATGATGGAGGATATCATGAAGCTTTTTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR TCA 90 bp | TGTCATAAGCTGATAAGGCTTAAGGAATTACAGCAGAATTGTTTACATGTGTTCTTCTTAAAACAGCCTTaGGGATGCAAAGGTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHKLIRLKELQQNCLHVFFLKQP*GCKGKR Trigger: TCTCTTACCTTTGCATCCTCAAGGCTGTTTTAAGAA...GAACACATGTAAACAATTCTGCTGTAATTCCTTAAGCCTTATCAGCTTATGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| 3UTR CAA 72 bp | TTGTTGCTTAACTGTAAATGTTTGTTCTTTACAGAATaGGATGTTTGTACCCTTTGGCCATTTTCCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLNCKCLFFTE*DVCTLWPFSNW Trigger: CCAGTTGGAAAATGGCCAAAGGGTACAAACATCCAATTCTGTAAAGAACAAACATTTACAGTTAAGCAACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR CAA 90 bp | CTCATTCAGCATAAGTCAACTTTCTGTACCTTCCTTACTAAATCAGCAGAGGTGCAATTTGAAGATGGCTaGAACCTCACAGGAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LIQHKSTFCTFLTKSAEVQFEDG*NLTGEM Trigger: CATTTCTCCTGTGAGGTTCAAGCCATCTTCAAATTG...CACCTCTGCTGATTTAGTAAGGAAGGTACAGAAAGTTGACTTATGCTGAATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTTCTTAGTTCAATTAGCCCACGACACAGGAAGGTTTACAGAGCTCTATTTCAATTTGAAGATGGCTaGAACCTCACAGGAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: SFLSSISPRHRKVYRALFQFEDG*NLTGEM Trigger: CATTTCTCCTGTGAGGTTCAAGCCATCTTCAAATTG...AAATAGAGCTCTGTAAACCTTCCTGTGTCGTGGGCTAATTGAACTAAGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216007.2 ENSMUST00000216108.2 |
||
| CDS TCA 72 bp | TCGAGAAGACATAACCAGATTATACCTGAGTGGATTTaGAATAGCTACAAATCTATCATAAGCCATAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRRHNQIIPEWI*NSYKSIISHNG Trigger: GCCATTATGGCTTATGATAGATTTGTAGCTATTTCAAATCCACTCAGGTATAATCTGGTTATGTCTTCTCGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054541.3 ENSMUST00000216007.2 ENSMUST00000216108.2 |
||