RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1323 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050504

Ensembl transcript IDs: ENSMUST00000057071.2, ENSMUST00000213463.2, ENSMUST00000213556.3

Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGATAGAGAGAAAGGAAGCCACCGAAGGGGAGAGAGAGCATGAGTaGATGACAAGGAGAAATAGCAAGTTTCTGCGGTACATCACTGGA +
Preference number: 1 (lower is better)
Translates to: RIERKEATEGEREHE*MTRRNSKFLRYITG
Trigger: TCCAGTGATGTACCGCAGAAACTTGCTATTTCTCCTTGTCATGCACTCATGCTCTCTCTCCCCTTCGGTGGCTTCCTTTCTCTCTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR GCA 90 bp TACGCCCAGGTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTaGTTGATTTCAGGTATGTTCCATGATCTCTGGTTCCAGATGAAT +
Preference number: 1 (lower is better)
Translates to: YAQVSTSMLASLTHN*LISGMFHDLWFQMN
Trigger: ATTCATCTGGAACCAGAGATCATGGAACATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAACCTGGGCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CCA 90 bp AAATATAATTGGCTACAGCCAATTACTGGAGGTATTAGAGGTAAGTaGGTTTGGAGTGACCTTGTTGAAGGAGGAGAGACCAGGCCGAGA +
Preference number: 1 (lower is better)
Translates to: KYNWLQPITGGIRGK*VWSDLVEGGETRPR
Trigger: TCTCGGCCTGGTCTCTCCTCCTTCAACAAGGTCACTCCAAACCCACTTACCTCTAATACCTCCAGTAATTGGCTGTAGCCAATTATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR TCA 90 bp GCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGTTCCATaGTCTCTGGTTCCAGATGAATACTATTTTCCAGTTTTCCTTGAA +
Preference number: 1 (lower is better)
Translates to: AGVSDSQLLDFRYVP*SLVPDEYYFPVFLE
Trigger: TTCAAGGAAAACTGGAAAATAGTATTCATCTGGAACCAGAGATCATGGAACATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR GCA 90 bp GATCTGAGCACATTCTCTGTCCCTGAGCTGTGCCACCAACCCCATTaGTCACAGTATTTAGAAACTATAACAATCACCATGTTTTTCTTA +
Preference number: 1 (lower is better)
Translates to: DLSTFSVPELCHQPH*SQYLETITITMFFL
Trigger: TAAGAAAAACATGGTGATTGTTATAGTTTCTAAATACTGTGAGCAATGGGGTTGGTGGCACAGCTCAGGGACAGAGAATGTGCTCAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR TCA 90 bp GCATCCACAGACCCCCAAAAATCTGTTGTATTGTGGTATTCTAGGTaGCAAGACTTTAAATTTGCCTTCACTGCACAACAGAATGTGACA +
Preference number: 1 (lower is better)
Translates to: ASTDPQKSVVLWYSR*QDFKFAFTAQQNVT
Trigger: TGTCACATTCTGTTGTGCAGTGAAGGCAAATTTAAAGTCTTGTCACCTAGAATACCACAATACAACAGATTTTTGGGGGTCTGTGGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CCA 90 bp ATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTGGCTTCCAAATTaGAGAACAGTACATAAAGATGGTCTCTTATTACAGGATGCAATC +
Preference number: 1 (lower is better)
Translates to: ILCSFCGPCYLWLPN*RTVHKDGLLLQDAI
Trigger: GATTGCATCCTGTAATAAGAGACCATCTTTATGTACTGTTCTCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CCA 90 bp AAAATGCTCAAGTTAACTTTGTCCTCTTGTTCAGCAGGAGAAACCTaGTATTCAGTAGACCCTGTACACCGAAGTCTTAATAAAAGGTTG +
Preference number: 1 (lower is better)
Translates to: KMLKLTLSSCSAGET*YSVDPVHRSLNKRL
Trigger: CAACCTTTTATTAAGACTTCGGTGTACAGGGTCTACTGAATACCAGGTTTCTCCTGCTGAACAAGAGGACAAAGTTAACTTGAGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR CCA 90 bp CTGAAATGTACTATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTaGCTTCCAAATTGGAGAACAGTACATAAAGATGGTCTCTTATTA +
Preference number: 1 (lower is better)
Translates to: LKCTILCSFCGPCYL*LPNWRTVHKDGLLL
Trigger: TAATAAGAGACCATCTTTATGTACTGTTCTCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGTACATTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR TCA 90 bp TTGAGTGGCTGGCAAGTTGACTATAACTTAAATTCTTTCTTATTATaGTGCAAATTGAATGTGGAGCCATGTGCACATTACTCAAGCAAG +
Preference number: 1 (lower is better)
Translates to: LSGWQVDYNLNSFLL*CKLNVEPCAHYSSK
Trigger: CTTGCTTGAGTAATGTGCACATGGCTCCACATTCAATTTGCATCATAATAAGAAAGAATTTAAGTTATAGTCAACTTGCCAGCCACTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR CCA 90 bp AGCTGGTCTATTGCTGTGTATTGCAATGCTAAATTTGATAAACAATaGTCAGGTGACTTCTCATGTTTACAAACTTTTGTTGTGCAAACC +
Preference number: 1 (lower is better)
Translates to: SWSIAVYCNAKFDKQ*SGDFSCLQTFVVQT
Trigger: GGTTTGCACAACAAAAGTTTGTAAACATGAGAAGTCACCTGACCATTGTTTATCAAATTTAGCATTGCAATACACAGCAATAGACCAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR TCA 90 bp CTAGGTGACAAGACTTTAAATTTGCCTTCACTGCACAACAGAATGTaGCAATATATAGTAAAGAAAGTGGGCTACATAAGGTTAGTTGTA +
Preference number: 1 (lower is better)
Translates to: LGDKTLNLPSLHNRM*QYIVKKVGYIRLVV
Trigger: TACAACTAACCTTATGTAGCCCACTTTCTTTACTATATATTGTCACATTCTGTTGTGCAGTGAAGGCAAATTTAAAGTCTTGTCACCTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CAA 90 bp GCCCAGGTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTGCTaGATTTCAGGTATGTTCCATGATCTCTGGTTCCAGATGAATACT +
Preference number: 2 (lower is better)
Translates to: AQVSTSMLASLTHNC*ISGMFHDLWFQMNT
Trigger: AGTATTCATCTGGAACCAGAGATCATGGAACATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAACCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR TCA 90 bp GTACTATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTGGCTTCCAAATTGGACACATTCTCTGTCCCTaGGCTGTGCCACCAACCCCA +
Preference number: 2 (lower is better)
Translates to: VLFSVLFVVPVTSGFQIGHILCP*AVPPTP
Trigger: TGGGGTTGGTGGCACAGCTCAGGGACAGAGAATGTG...TCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR TCA 90 bp GTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGGAGAGCATGAGTGCATaGCAAGGAGAAATAGCAAGT +
Preference number: 2 (lower is better)
Translates to: VSTSMLASLTHNCLISGMESMSA*QGEIAS
Trigger: ACTTGCTATTTCTCCTTGTCATGCACTCATGCTCTC...CATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR GCA 90 bp GTACTATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTGGCTTCCAAATTGGATCTGTCCCTGAGCTGTaGCACCAACCCCATTGCTCA +
Preference number: 2 (lower is better)
Translates to: VLFSVLFVVPVTSGFQIGSVPEL*HQPHCS
Trigger: TGAGCAATGGGGTTGGTGGCACAGCTCAGGGACAGA...TCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR GCA 90 bp ACAAGGAGAAATAGCAAGTTTCTGCGGTACATCACTGGAGAGGTAGCCAGGTTATGCAGCAATCACTGGTaGAATTCAGAACTGTGTGCC +
Preference number: 2 (lower is better)
Translates to: TRRNSKFLRYITGEVARLCSNHW*NSELCA
Trigger: GGCACACAGTTCTGAATTGCACCAGTGATTGCTGCA...TAACCTGGCTACCTCTCCAGTGATGTACCGCAGAAACTTGCTATTTCTCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR GCA 90 bp GTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGTGCCACCAACCCCATTaGTCACAGTATTTAGAAACT +
Preference number: 2 (lower is better)
Translates to: VSTSMLASLTHNCLISGMCHQPH*SQYLET
Trigger: AGTTTCTAAATACTGTGAGCAATGGGGTTGGTGGCA...CATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR GCA 90 bp GTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGGTTCCAATCAAAATTTaGATGCAGCAATCACTGGTG +
Preference number: 2 (lower is better)
Translates to: VSTSMLASLTHNCLISGMVPIKI*MQQSLV
Trigger: CACCAGTGATTGCTGCATGCAAATTTTGATTGGAAC...CATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CAA 90 bp GTTGGGGCATCCTATTCACGGAAAGGTAAAATGCTCAAGTTAACTTaGTCCTCTTGTTCAGCAGGAGAAACCTGGTATTCAGTAGACCCT +
Preference number: 2 (lower is better)
Translates to: VGASYSRKGKMLKLT*SSCSAGETWYSVDP
Trigger: AGGGTCTACTGAATACCAGGTTTCTCCTGCTGAACAAGAGGACAAAGTTAACTTGAGCATTTTACCTTTCCGTGAATAGGATGCCCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR TCA 90 bp TGTGTCTTGATTACTCTTAAGCTAGTCTGGAATAAACTTAAATTGGTTGCACCTCACATTCTCTGTCCCTaGGCTGTGCCACCAACCCCA +
Preference number: 2 (lower is better)
Translates to: CVLITLKLVWNKLKLVAPHILCP*AVPPTP
Trigger: TGGGGTTGGTGGCACAGCTCAGGGACAGAGAATGTG...AGGTGCAACCAATTTAAGTTTATTCCAGACTAGCTTAAGAGTAATCAAGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR TCA 90 bp CCATGTGCACATTACTCAAGCAAGCTACCACTGAGCTTCATTCTTTATCCACAGGTTTTCCTTGAATCTTaGGCTGGTCTATTGCTGTGT +
Preference number: 2 (lower is better)
Translates to: PCAHYSSKLPLSFILYPQVFLES*AGLLLC
Trigger: ACACAGCAATAGACCAGCTCAAGATTCAAGGAAAAC...CTGTGGATAAAGAATGAAGCTCAGTGGTAGCTTGCTTGAGTAATGTGCACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR GCA 90 bp AGGCCCATAACTTCCTGTGGAGAAATGTTGAAAGCTGATCAGGTCATAGCTATCTGCCACCAACCCCATTaGTCACAGTATTTAGAAACT +
Preference number: 2 (lower is better)
Translates to: RPITSCGEMLKADQVIAICHQPH*SQYLET
Trigger: AGTTTCTAAATACTGTGAGCAATGGGGTTGGTGGCA...GATAGCTATGACCTGATCAGCTTTCAACATTTCTCCACAGGAAGTTATGGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR GCA 90 bp GGGGCATCCTATTCACGGAAAGGTAAAATGCTCAAGTTAACTTTGTCCTCTTGTGAGAGAGAGCATGAGTaGATGACAAGGAGAAATAGC +
Preference number: 2 (lower is better)
Translates to: GASYSRKGKMLKLTLSSCEREHE*MTRRNS
Trigger: GCTATTTCTCCTTGTCATGCACTCATGCTCTCTCTC...ACAAGAGGACAAAGTTAACTTGAGCATTTTACCTTTCCGTGAATAGGATGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR CCA 90 bp GGGGCATCCTATTCACGGAAAGGTAAAATGCTCAAGTTAACTTTGTCCTCTTGTGTGTGTATTTCCGGCTaGGCATTTCCTCATGCTAAA +
Preference number: 2 (lower is better)
Translates to: GASYSRKGKMLKLTLSSCVCISG*AFPHAK
Trigger: TTTAGCATGAGGAAATGCCCAGCCGGAAATACACAC...ACAAGAGGACAAAGTTAACTTGAGCATTTTACCTTTCCGTGAATAGGATGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR TCA 90 bp GAAAAGAAACCCCTCGGTATAAATAGAGATGGCTTCATATCATGTGATCAAGGCGAGAGCATGAGTGCATaGCAAGGAGAAATAGCAAGT +
Preference number: 2 (lower is better)
Translates to: EKKPLGINRDGFISCDQGESMSA*QGEIAS
Trigger: ACTTGCTATTTCTCCTTGTCATGCACTCATGCTCTC...GCCTTGATCACATGATATGAAGCCATCTCTATTTATACCGAGGGGTTTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR TCA 90 bp GTACTATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTGGCTTCCAAATTGGACCTATGCCAGACATATaGTTAGAGGTTTTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: VLFSVLFVVPVTSGFQIGPMPDI*LEVFLL
Trigger: AAGCAGGAAAACCTCTAATCATATGTCTGGCATAGG...TCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR GCA 90 bp AGAGAAAGGTTAAGAAGGAAAAAGGTTACTGAAGGAAAAGAGGTTCAGATTCCCTGCAGCAATCACTGGTaGAATTCAGAACTGTGTGCC +
Preference number: 2 (lower is better)
Translates to: RERLRRKKVTEGKEVQIPCSNHW*NSELCA
Trigger: GGCACACAGTTCTGAATTGCACCAGTGATTGCTGCA...GGGAATCTGAACCTCTTTTCCTTCAGTAACCTTTTTCCTTCTTAACCTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR CCA 90 bp TCTATGAGTGTCTGTACTTGCCCCTTAAGCATCCCTGCTCTGAGATGGTGTAACATGTTCCATGATCTCTaGTTCCAGATGAATACTATT +
Preference number: 2 (lower is better)
Translates to: SMSVCTCPLSIPALRWCNMFHDL*FQMNTI
Trigger: AATAGTATTCATCTGGAACCAGAGATCATGGAACAT...GTTACACCATCTCAGAGCAGGGATGCTTAAGGGGCAAGTACAGACACTCATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR TCA 90 bp GTTGCCAGTTCTATGTATGAGGCATATCCATTACTAAAGCACTTTGATATCCCCCCTATGCCAGACATATaGTTAGAGGTTTTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: VASSMYEAYPLLKHFDIPPMPDI*LEVFLL
Trigger: AAGCAGGAAAACCTCTAATCATATGTCTGGCATAGG...GGGGATATCAAAGTGCTTTAGTAATGGATATGCCTCATACATAGAACTGGCAAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR TCA 90 bp AGGAAAAGAGGTTCAGATTCCCTACTACGGAGCAATAATAAGCATCCACAGACCTTGTGGTATTCTAGGTaGCAAGACTTTAAATTTGCC +
Preference number: 2 (lower is better)
Translates to: RKRGSDSLLRSNNKHPQTLWYSR*QDFKFA
Trigger: GGCAAATTTAAAGTCTTGTCACCTAGAATACCACAA...GGTCTGTGGATGCTTATTATTGCTCCGTAGTAGGGAATCTGAACCTCTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CAA 90 bp TGTCTCAGTGCTGAAAATACTGAAATGTACTATTCTCTGTTCTTTTaGTGGTCCCTGTTACCTCTGGCTTCCAAATTGGAGAACAGTACA +
Preference number: 2 (lower is better)
Translates to: CLSAENTEMYYSLFF*WSLLPLASKLENST
Trigger: TGTACTGTTCTCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGTACATTTCAGTATTTTCAGCACTGAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR GCA 90 bp GGGGCATCCTATTCACGGAAAGGTAAAATGCTCAAGTTAACTTTGTCCTCTTGTCAATCAAAATTTGCATaGAGCAATCACTGGTGCAAT +
Preference number: 2 (lower is better)
Translates to: GASYSRKGKMLKLTLSSCQSKFA*SNHWCN
Trigger: ATTGCACCAGTGATTGCTGCATGCAAATTTTGATTG...ACAAGAGGACAAAGTTAACTTGAGCATTTTACCTTTCCGTGAATAGGATGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR CCA 90 bp GTTGCCAGTTCTATGTATGAGGCATATCCATTACTAAAGCACTTTGATATCCCCATTAGATTGATATGGTaGTGGTGGAGAGAGAAAGGT +
Preference number: 2 (lower is better)
Translates to: VASSMYEAYPLLKHFDIPIRLIW*WWREKG
Trigger: ACCTTTCTCTCTCCACCACCACCATATCAATCTAAT...GGGGATATCAAAGTGCTTTAGTAATGGATATGCCTCATACATAGAACTGGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR GCA 90 bp GAAAAGAAACCCCTCGGTATAAATAGAGATGGCTTCATATCATGTGATCAAGGCGTCTTAATAAAAGGTTaGTGGGTATCTATGAGTGTC +
Preference number: 2 (lower is better)
Translates to: EKKPLGINRDGFISCDQGVLIKG*WVSMSV
Trigger: GACACTCATAGATACCCAGCAACCTTTTATTAAGAC...GCCTTGATCACATGATATGAAGCCATCTCTATTTATACCGAGGGGTTTCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR CCA 90 bp TCATATTGTCTATTGCACTGCTATGCTTTCAATCTTGAAGATGTCTCAGTGCTGGACATTAGATTGATATaGTGGTGGTGGAGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: SYCLLHCYAFNLEDVSVLDIRLI*WWWREK
Trigger: TTTCTCTCTCCACCACCACCATATCAATCTAATGTC...CAGCACTGAGACATCTTCAAGATTGAAAGCATAGCAGTGCAATAGACAATATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR TCA 90 bp TCATTATGTTCCCCCAGCTGTAGTAAGCATGACAACACATTAAAACATAGTAGTAGTGTTTTCTGTCATTaGGTTTCTGGAGATATGGCT +
Preference number: 2 (lower is better)
Translates to: SLCSPSCSKHDNTLKHSSSVFCH*VSGDMA
Trigger: AGCCATATCTCCAGAAACTCAATGACAGAAAACACT...ACTACTATGTTTTAATGTGTTGTCATGCTTACTACAGCTGGGGGAACATAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR GCA 90 bp AGAGAAAGGTTAAGAAGGAAAAAGGTTACTGAAGGAAAAGAGGTTCAGATTCCCCAATCAAAATTTGCATaGAGCAATCACTGGTGCAAT +
Preference number: 2 (lower is better)
Translates to: RERLRRKKVTEGKEVQIPQSKFA*SNHWCN
Trigger: ATTGCACCAGTGATTGCTGCATGCAAATTTTGATTG...GGGAATCTGAACCTCTTTTCCTTCAGTAACCTTTTTCCTTCTTAACCTTTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR GCA 90 bp TCATTATGTTCCCCCAGCTGTAGTAAGCATGACAACACATTAAAACATAGTAGTCATCATATTGTCTATTaGACTGCTATGCTTTCAATC +
Preference number: 2 (lower is better)
Translates to: SLCSPSCSKHDNTLKHSSHHIVY*TAMLSI
Trigger: GATTGAAAGCATAGCAGTGCAATAGACAATATGATG...ACTACTATGTTTTAATGTGTTGTCATGCTTACTACAGCTGGGGGAACATAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR CCA 72 bp CAGCCAATTACTGGAGGTATTAGAGGTAAGTGGGTTTaGAGTGACCTTGTTGAAGGAGGAGAGACCAGGCCG +
Preference number: 3 (lower is better)
Translates to: QPITGGIRGKWV*SDLVEGGETRP
Trigger: CGGCCTGGTCTCTCCTCCTTCAACAAGGTCACTCCAAACCCACTTACCTCTAATACCTCCAGTAATTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR TCA 72 bp AGGAAGCCACCGAAGGGGAGAGAGAGCATGAGTGCATaGCAAGGAGAAATAGCAAGTTTCTGCGGTACATCA +
Preference number: 3 (lower is better)
Translates to: RKPPKGRESMSA*QGEIASFCGTS
Trigger: TGATGTACCGCAGAAACTTGCTATTTCTCCTTGTCATGCACTCATGCTCTCTCTCCCCTTCGGTGGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR CAA 90 bp GTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGGTGCCACCAACCCCATaGCTCACAGTATTTAGAAAC +
Preference number: 3 (lower is better)
Translates to: VSTSMLASLTHNCLISGMVPPTP*LTVFRN
Trigger: GTTTCTAAATACTGTGAGCAATGGGGTTGGTGGCAC...CATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR GCA 72 bp GTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTaGTTGATTTCAGGTATGTTCCATGATCTCTGGTTC +
Preference number: 3 (lower is better)
Translates to: VSTSMLASLTHN*LISGMFHDLWF
Trigger: GAACCAGAGATCATGGAACATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CCA 72 bp TGGCTACAGCCAATTACTGGAGGTATTAGAGGTAAGTaGGTTTGGAGTGACCTTGTTGAAGGAGGAGAGACC +
Preference number: 3 (lower is better)
Translates to: WLQPITGGIRGK*VWSDLVEGGET
Trigger: GGTCTCTCCTCCTTCAACAAGGTCACTCCAAACCCACTTACCTCTAATACCTCCAGTAATTGGCTGTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR CAA 90 bp GTACTATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTGGCTTCCAAATTGGATTTGGAGTGACCTTGTaGAAGGAGGAGAGACCAGGC +
Preference number: 3 (lower is better)
Translates to: VLFSVLFVVPVTSGFQIGFGVTL*KEERPG
Trigger: GCCTGGTCTCTCCTCCTTCAACAAGGTCACTCCAAA...TCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CCA 72 bp TTGCCTCGATATTTCTCTAGAAAAGATCCTTGGCTATaGCTCCCTAAACCCCATCCAACCTACCCTGCTCTA +
Preference number: 3 (lower is better)
Translates to: LPRYFSRKDPWL*LPKPHPTYPAL
Trigger: TAGAGCAGGGTAGGTTGGATGGGGTTTAGGGAGCCATAGCCAAGGATCTTTTCTAGAGAAATATCGAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR GCA 72 bp ATAAAAGGTTGCTGGGTATCTATGAGTGTCTGTACTTaGCCCTTAAGCATCCCTGCTCTGAGATGGTGTAAC +
Preference number: 3 (lower is better)
Translates to: IKGCWVSMSVCT*PLSIPALRWCN
Trigger: GTTACACCATCTCAGAGCAGGGATGCTTAAGGGGCAAGTACAGACACTCATAGATACCCAGCAACCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR CAA 90 bp GTACTATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTGGCTTCCAAATTGGAGTGCCACCAACCCCATaGCTCACAGTATTTAGAAAC +
Preference number: 3 (lower is better)
Translates to: VLFSVLFVVPVTSGFQIGVPPTP*LTVFRN
Trigger: GTTTCTAAATACTGTGAGCAATGGGGTTGGTGGCAC...TCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR CAA 90 bp TCTATGAGTGTCTGTACTTGCCCCTTAAGCATCCCTGCTCTGAGATGGTGTAACGACCTGAAAATTATGTaGCCAGTTCTATGTATGAGG +
Preference number: 3 (lower is better)
Translates to: SMSVCTCPLSIPALRWCNDLKIM*PVLCMR
Trigger: CCTCATACATAGAACTGGCAACATAATTTTCAGGTC...GTTACACCATCTCAGAGCAGGGATGCTTAAGGGGCAAGTACAGACACTCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR TCA 72 bp TGGAGCCATGTGCACATTACTCAAGCAAGCTACCACTaGGCTTCATTCTTTATCCACAGCATTTGTCCCTTA +
Preference number: 3 (lower is better)
Translates to: WSHVHITQASYH*ASFFIHSICPL
Trigger: TAAGGGACAAATGCTGTGGATAAAGAATGAAGCTCAGTGGTAGCTTGCTTGAGTAATGTGCACATGGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR CAA 90 bp CCATGTGCACATTACTCAAGCAAGCTACCACTGAGCTTCATTCTTTATCCACAGTCCTGTGGAGAAATGTaGAAAGCTGATCAGGTCATA +
Preference number: 3 (lower is better)
Translates to: PCAHYSSKLPLSFILYPQSCGEM*KADQVI
Trigger: TATGACCTGATCAGCTTTCAACATTTCTCCACAGGA...CTGTGGATAAAGAATGAAGCTCAGTGGTAGCTTGCTTGAGTAATGTGCACATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR CAA 90 bp CCATGTGCACATTACTCAAGCAAGCTACCACTGAGCTTCATTCTTTATCCACAGGACAAGACTTTAAATTaGCCTTCACTGCACAACAGA +
Preference number: 3 (lower is better)
Translates to: PCAHYSSKLPLSFILYPQDKTLN*PSLHNR
Trigger: TCTGTTGTGCAGTGAAGGCAAATTTAAAGTCTTGTC...CTGTGGATAAAGAATGAAGCTCAGTGGTAGCTTGCTTGAGTAATGTGCACATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR GCA 72 bp AGCCAGGTAATGAGGACATCATATTGTCTATTGCACTaGTATGCTTTCAATCTTGAAGATGTCTCAGTGCTG +
Preference number: 3 (lower is better)
Translates to: SQVMRTSYCLLH*YAFNLEDVSVL
Trigger: CAGCACTGAGACATCTTCAAGATTGAAAGCATAGCAGTGCAATAGACAATATGATGTCCTCATTACCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR CAA 90 bp GTACTATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTGGCTTCCAAATTGGAAGTTCCAATCAAAATTaGCATGCAGCAATCACTGGT +
Preference number: 3 (lower is better)
Translates to: VLFSVLFVVPVTSGFQIGSSNQN*HAAITG
Trigger: ACCAGTGATTGCTGCATGCAAATTTTGATTGGAACT...TCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR CAA 90 bp AGGCCCATAACTTCCTGTGGAGAAATGTTGAAAGCTGATCAGGTCATAGCTATCATTTTCCAGTTTTCCTaGAATCTTGAGCTGGTCTAT +
Preference number: 3 (lower is better)
Translates to: RPITSCGEMLKADQVIAIIFQFS*NLELVY
Trigger: ATAGACCAGCTCAAGATTCAAGGAAAACTGGAAAAT...GATAGCTATGACCTGATCAGCTTTCAACATTTCTCCACAGGAAGTTATGGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR TCA 72 bp GACCCCCAAAAATCTGTTGTATTGTGGTATTCTAGGTaGCAAGACTTTAAATTTGCCTTCACTGCACAACAG +
Preference number: 3 (lower is better)
Translates to: DPQKSVVLWYSR*QDFKFAFTAQQ
Trigger: CTGTTGTGCAGTGAAGGCAAATTTAAAGTCTTGTCACCTAGAATACCACAATACAACAGATTTTTGGGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CCA 72 bp ACTATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTaGCTTCCAAATTGGAGAACAGTACATAAAGATGGT +
Preference number: 3 (lower is better)
Translates to: TILCSFCGPCYL*LPNWRTVHKDG
Trigger: ACCATCTTTATGTACTGTTCTCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR-3UTR CAA 90 bp AATGCTCAAGTTAACTTTGTCCTCTTGTTCAGCAGGAGAAACCTGGTATTCAGTCATGTTTACAAACTTTaGTTGTGCAAACCTTGTTCC +
Preference number: 3 (lower is better)
Translates to: NAQVNFVLLFSRRNLVFSHVYKL*LCKPCS
Trigger: GGAACAAGGTTTGCACAACAAAAGTTTGTAAACATG...ACTGAATACCAGGTTTCTCCTGCTGAACAAGAGGACAAAGTTAACTTGAGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR TCA 72 bp TCTGACTCACAACTGCTTGATTTCAGGTATGTTCCATaGTCTCTGGTTCCAGATGAATACTATTTTCCAGTT +
Preference number: 3 (lower is better)
Translates to: SDSQLLDFRYVP*SLVPDEYYFPV
Trigger: AACTGGAAAATAGTATTCATCTGGAACCAGAGATCATGGAACATACCTGAAATCAAGCAGTTGTGAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR GCA 72 bp AATAACCATGAACATGGTCTAGTTCCAATCAAAATTTaGATGCAGCAATCACTGGTGCAATTCAGAACTGTG +
Preference number: 3 (lower is better)
Translates to: NNHEHGLVPIKI*MQQSLVQFRTV
Trigger: CACAGTTCTGAATTGCACCAGTGATTGCTGCATGCAAATTTTGATTGGAACTAGACCATGTTCATGGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR GCA 72 bp TCAACAGCATCTAGTGGTGTACAGTTCTGTTTTCATTaGCTCGATATTTCTCTAGAAAAGATCCTTGGCTAT +
Preference number: 3 (lower is better)
Translates to: STASSGVQFCFH*LDISLEKILGY
Trigger: ATAGCCAAGGATCTTTTCTAGAGAAATATCGAGGCAATGAAAACAGAACTGTACACCACTAGATGCTGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR GCA 72 bp TTTCTTATTATGATGCAAATTGAATGTGGAGCCATGTaGACATTACTCAAGCAAGCTACCACTGAGCTTCAT +
Preference number: 3 (lower is better)
Translates to: FLIMMQIECGAM*TLLKQATTELH
Trigger: ATGAAGCTCAGTGGTAGCTTGCTTGAGTAATGTGCACATGGCTCCACATTCAATTTGCATCATAATAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR TCA 72 bp ATTGAGTTTCTGGAGATATGGCTTAGAGAAAGATGTTaGGAGCCAGGTAATGAGGACATCATATTGTCTATT +
Preference number: 3 (lower is better)
Translates to: IEFLEIWLRERC*EPGNEDIILSI
Trigger: AATAGACAATATGATGTCCTCATTACCTGGCTCTCAACATCTTTCTCTAAGCCATATCTCCAGAAACTCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR-3UTR CAA 90 bp TGTGTCTTGATTACTCTTAAGCTAGTCTGGAATAAACTTAAATTGGTTGCACCTAGTTCCAATCAAAATTaGCATGCAGCAATCACTGGT +
Preference number: 3 (lower is better)
Translates to: CVLITLKLVWNKLKLVAPSSNQN*HAAITG
Trigger: ACCAGTGATTGCTGCATGCAAATTTTGATTGGAACT...AGGTGCAACCAATTTAAGTTTATTCCAGACTAGCTTAAGAGTAATCAAGACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR TCA 72 bp AAGACTTTAAATTTGCCTTCACTGCACAACAGAATGTaGCAATATATAGTAAAGAAAGTGGGCTACATAAGG +
Preference number: 3 (lower is better)
Translates to: KTLNLPSLHNRM*QYIVKKVGYIR
Trigger: CCTTATGTAGCCCACTTTCTTTACTATATATTGTCACATTCTGTTGTGCAGTGAAGGCAAATTTAAAGTCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR TCA 72 bp ATCATATTGTCTATTGCACTGCTATGCTTTCAATCTTaGAGATGTCTCAGTGCTGAAAATACTGAAATGTAC +
Preference number: 3 (lower is better)
Translates to: IILSIALLCFQS*RCLSAENTEMY
Trigger: GTACATTTCAGTATTTTCAGCACTGAGACATCTTCAAGATTGAAAGCATAGCAGTGCAATAGACAATATGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp GTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGAGAAGAAGTGTGAGATaGCCTGTGGCTGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: VSTSMLASLTHNCLISGMRRSVR*PVAGRM
Trigger: CATTCTGCCAGCCACAGGTCATCTCACACTTCTTCT...CATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp ACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGTTCCATATCCGATTTCCTGCTTaGGATCCATGCCGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: TSMLASLTHNCLISGMFHIRFPA*DPCREG
Trigger: ACCCTCTCGGCATGGATCTCAAGCAGGAAATCGGAT...ATGGAACATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CAA 72 bp AGCACCAGCATGCTGGCGTCTCTGACTCACAACTGCTaGATTTCAGGTATGTTCCATGATCTCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: STSMLASLTHNC*ISGMFHDLWFQ
Trigger: CTGGAACCAGAGATCATGGAACATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp GTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGCAGAAGCGAAGACTATaGACAAGCCCATTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VSTSMLASLTHNCLISGMQKRRL*TSPFEP
Trigger: TGGCTCAAATGGGCTTGTTCATAGTCTTCGCTTCTG...CATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp ACAAGGAGAAATAGCAAGTTTCTGCGGTACATCACTGGAGAGGTAGCCAGGTTAATCCGATTTCCTGCTTaGGATCCATGCCGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: TRRNSKFLRYITGEVARLIRFPA*DPCREG
Trigger: ACCCTCTCGGCATGGATCTCAAGCAGGAAATCGGAT...TAACCTGGCTACCTCTCCAGTGATGTACCGCAGAAACTTGCTATTTCTCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp AGGCCCATAACTTCCTGTGGAGAAATGTTGAAAGCTGATCAGGTCATAGCTATCCTGTGGCTGGCAGAATaGCAGCTGTGTGATGGAAGT +
Preference number: 4 (lower is better)
Translates to: RPITSCGEMLKADQVIAILWLAE*QLCDGS
Trigger: ACTTCCATCACACAGCTGTCATTCTGCCAGCCACAG...GATAGCTATGACCTGATCAGCTTTCAACATTTCTCCACAGGAAGTTATGGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp GTACTATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTGGCTTCCAAATTGGACTGTGGCTGGCAGAATaGCAGCTGTGTGATGGAAGT +
Preference number: 4 (lower is better)
Translates to: VLFSVLFVVPVTSGFQIGLWLAE*QLCDGS
Trigger: ACTTCCATCACACAGCTGTCATTCTGCCAGCCACAG...TCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR CCA 90 bp GTACTATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTGGCTTCCAAATTGGAGAGATGACCTGTGGCTaGCAGAATGACAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VLFSVLFVVPVTSGFQIGEMTCG*QNDSCV
Trigger: CACACAGCTGTCATTCTGCCAGCCACAGGTCATCTC...TCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR GCA 90 bp GTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGAGCCCATTTGAGCCATaGATCCAAAGAAAGAAACTT +
Preference number: 4 (lower is better)
Translates to: VSTSMLASLTHNCLISGMSPFEP*IQRKKL
Trigger: AAGTTTCTTTCTTTGGATGCATGGCTCAAATGGGCT...CATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp ACAAGGAGAAATAGCAAGTTTCTGCGGTACATCACTGGAGAGGTAGCCAGGTTAAGAATGACAGCTGTGTaGTGGAAGTTGTTACAGCAA +
Preference number: 4 (lower is better)
Translates to: TRRNSKFLRYITGEVARLRMTAV*WKLLQQ
Trigger: TTGCTGTAACAACTTCCATCACACAGCTGTCATTCT...TAACCTGGCTACCTCTCCAGTGATGTACCGCAGAAACTTGCTATTTCTCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR CCA 90 bp AGAGAAAGGTTAAGAAGGAAAAAGGTTACTGAAGGAAAAGAGGTTCAGATTCCCGAGATGACCTGTGGCTaGCAGAATGACAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RERLRRKKVTEGKEVQIPEMTCG*QNDSCV
Trigger: CACACAGCTGTCATTCTGCCAGCCACAGGTCATCTC...GGGAATCTGAACCTCTTTTCCTTCAGTAACCTTTTTCCTTCTTAACCTTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp ACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGTTCCATGAGACAACGAACTTTTaGCATGGTAATATGGTAAAG +
Preference number: 4 (lower is better)
Translates to: TSMLASLTHNCLISGMFHETTNF*HGNMVK
Trigger: CTTTACCATATTACCATGTCAAAAGTTCGTTGTCTC...ATGGAACATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR GCA 90 bp GTACTATTCTCTGTTCTTTTTGTGGTCCCTGTTACCTCTGGCTTCCAAATTGGACCATGCCGAGAGGGTTaGAAATACGTGTACATAGTT +
Preference number: 4 (lower is better)
Translates to: VLFSVLFVVPVTSGFQIGPCREG*KYVYIV
Trigger: AACTATGTACACGTATTTGCAACCCTCTCGGCATGG...TCCAATTTGGAAGCCAGAGGTAACAGGGACCACAAAAAGAACAGAGAATAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CAA 72 bp TATCCCCTGAGGCCCATAACTTCCTGTGGAGAAATGTaGAAAGCTGATCAGGTCATAGCTATCTATAACTTC +
Preference number: 4 (lower is better)
Translates to: YPLRPITSCGEM*KADQVIAIYNF
Trigger: GAAGTTATAGATAGCTATGACCTGATCAGCTTTCAACATTTCTCCACAGGAAGTTATGGGCCTCAGGGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp TCATTATGTTCCCCCAGCTGTAGTAAGCATGACAACACATTAAAACATAGTAGTAGAAGAAGTGTGAGATaGCCTGTGGCTGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: SLCSPSCSKHDNTLKHSSRRSVR*PVAGRM
Trigger: CATTCTGCCAGCCACAGGTCATCTCACACTTCTTCT...ACTACTATGTTTTAATGTGTTGTCATGCTTACTACAGCTGGGGGAACATAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
CDS-3UTR GCA 90 bp ATGCTAAAAATACCAGGGGATAATTTAGCGTTTGCAGCACAATTCTATGAGGTCCCATGCCGAGAGGGTTaGAAATACGTGTACATAGTT +
Preference number: 4 (lower is better)
Translates to: MLKIPGDNLAFAAQFYEVPCREG*KYVYIV
Trigger: AACTATGTACACGTATTTGCAACCCTCTCGGCATGG...GACCTCATAGAATTGTGCTGCAAACGCTAAATTATCCCCTGGTATTTTTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp AGAGAAAGGTTAAGAAGGAAAAAGGTTACTGAAGGAAAAGAGGTTCAGATTCCCATGAACAAGCCCATTTaGGCCATGCATCCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: RERLRRKKVTEGKEVQIPMNKPI*AMHPKK
Trigger: TTTCTTTGGATGCATGGCTCAAATGGGCTTGTTCAT...GGGAATCTGAACCTCTTTTCCTTCAGTAACCTTTTTCCTTCTTAACCTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp TCATATTGTCTATTGCACTGCTATGCTTTCAATCTTGAAGATGTCTCAGTGCTGATGAACAAGCCCATTTaGGCCATGCATCCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SYCLLHCYAFNLEDVSVLMNKPI*AMHPKK
Trigger: TTTCTTTGGATGCATGGCTCAAATGGGCTTGTTCAT...CAGCACTGAGACATCTTCAAGATTGAAAGCATAGCAGTGCAATAGACAATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp TGTGTCTTGATTACTCTTAAGCTAGTCTGGAATAAACTTAAATTGGTTGCACCTCAGAAGCGAAGACTATaGACAAGCCCATTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CVLITLKLVWNKLKLVAPQKRRL*TSPFEP
Trigger: TGGCTCAAATGGGCTTGTTCATAGTCTTCGCTTCTG...AGGTGCAACCAATTTAAGTTTATTCCAGACTAGCTTAAGAGTAATCAAGACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR TCA 90 bp TCATATTGTCTATTGCACTGCTATGCTTTCAATCTTGAAGATGTCTCAGTGCTGAGAATGACAGCTGTGTaGTGGAAGTTGTTACAGCAA +
Preference number: 4 (lower is better)
Translates to: SYCLLHCYAFNLEDVSVLRMTAV*WKLLQQ
Trigger: TTGCTGTAACAACTTCCATCACACAGCTGTCATTCT...CAGCACTGAGACATCTTCAAGATTGAAAGCATAGCAGTGCAATAGACAATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
3UTR CAA 72 bp CTCTGGTTCCAGATGAATACTATTTTCCAGTTTTCCTaGAATCTTGAGCTGGTCTATTGCTGTGTATTGCAA +
Preference number: 4 (lower is better)
Translates to: LWFQMNTIFQFS*NLELVYCCVLQ
Trigger: TTGCAATACACAGCAATAGACCAGCTCAAGATTCAAGGAAAACTGGAAAATAGTATTCATCTGGAACCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CAA 72 bp TGCCTGAGATCACAGAATCAGAAAACAAAGGTAGAGTaGAGTGGCTGGCAAGTTGACTATAACTTAAATTCT +
Preference number: 4 (lower is better)
Translates to: CLRSQNQKTKVE*SGWQVDYNLNS
Trigger: AGAATTTAAGTTATAGTCAACTTGCCAGCCACTCAACTCTACCTTTGTTTTCTGATTCTGTGATCTCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
CDS-3UTR GCA 90 bp TGTGTCTTGATTACTCTTAAGCTAGTCTGGAATAAACTTAAATTGGTTGCACCTAGCCCATTTGAGCCATaGATCCAAAGAAAGAAACTT +
Preference number: 4 (lower is better)
Translates to: CVLITLKLVWNKLKLVAPSPFEP*IQRKKL
Trigger: AAGTTTCTTTCTTTGGATGCATGGCTCAAATGGGCT...AGGTGCAACCAATTTAAGTTTATTCCAGACTAGCTTAAGAGTAATCAAGACACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CAA 72 bp AGCAATAATAAGCATCCACAGACCCCCAAAAATCTGTaGTATTGTGGTATTCTAGGTGACAAGACTTTAAAT +
Preference number: 4 (lower is better)
Translates to: SNNKHPQTPKNL*YCGILGDKTLN
Trigger: ATTTAAAGTCTTGTCACCTAGAATACCACAATACAACAGATTTTTGGGGGTCTGTGGATGCTTATTATTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
3UTR CAA 72 bp AAGCTACCACTGAGCTTCATTCTTTATCCACAGCATTaGTCCCTTAACTACCATTTTCTATTCTTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: KLPLSFILYPQH*SLNYHFLFLKR
Trigger: TCTTTTCAAGAATAGAAAATGGTAGTTAAGGGACAAATGCTGTGGATAAAGAATGAAGCTCAGTGGTAGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
CDS-3UTR CAA 90 bp GTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGGCCAACTACCAAGACTaGGGTTACCCAGGGATCAGA +
Preference number: 5 (lower is better)
Translates to: VSTSMLASLTHNCLISGMANYQD*GYPGIR
Trigger: TCTGATCCCTGGGTAACCCAAGTCTTGGTAGTTGGC...CATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR CAA 90 bp GTTAGCACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGGAGAAGGCTTTCTGTTaGCCAGAAACTGATGGGATG +
Preference number: 5 (lower is better)
Translates to: VSTSMLASLTHNCLISGMEKAFC*PETDGM
Trigger: CATCCCATCAGTTTCTGGCAAACAGAAAGCCTTCTC...CATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGTGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR CAA 90 bp AGGAAAAGAGGTTCAGATTCCCTACTACGGAGCAATAATAAGCATCCACAGACCGCCAACTACCAAGACTaGGGTTACCCAGGGATCAGA +
Preference number: 5 (lower is better)
Translates to: RKRGSDSLLRSNNKHPQTANYQD*GYPGIR
Trigger: TCTGATCCCTGGGTAACCCAAGTCTTGGTAGTTGGC...GGTCTGTGGATGCTTATTATTGCTCCGTAGTAGGGAATCTGAACCTCTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS TCA 90 bp CCCACCAAGGTAACATCCTGCTACCAAGAGGAGACAACGAACTTTTaGCATGGTAATATGGTAAAGCAATGGCCGACAGATGGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: PTKVTSCYQEETTNF*HGNMVKQWPTDGCV
Trigger: TACACAGCCATCTGTCGGCCATTGCTTTACCATATTACCATGTCAAAAGTTCGTTGTCTCCTCTTGGTAGCAGGATGTTACCTTGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057071.2
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR CAA 90 bp ACCAGCATGCTGGCGTCTCTGACTCACAACTGCTTGATTTCAGGTATGTTCCATTATGAACAAGCCCATTaGAGCCATGCATCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: TSMLASLTHNCLISGMFHYEQAH*SHASKE
Trigger: TTCTTTGGATGCATGGCTCAAATGGGCTTGTTCATA...ATGGAACATACCTGAAATCAAGCAGTTGTGAGTCAGAGACGCCAGCATGCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS-3UTR CAA 90 bp TCATTATGTTCCCCCAGCTGTAGTAAGCATGACAACACATTAAAACATAGTAGTGAGAAGGCTTTCTGTTaGCCAGAAACTGATGGGATG +
Preference number: 5 (lower is better)
Translates to: SLCSPSCSKHDNTLKHSSEKAFC*PETDGM
Trigger: CATCCCATCAGTTTCTGGCAAACAGAAAGCCTTCTC...ACTACTATGTTTTAATGTGTTGTCATGCTTACTACAGCTGGGGGAACATAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213556.3
CDS CCA 72 bp ACAAGGGTGAATCCACCACAGCCAACTACCAAGACTTaGGTTACCCAGGGATCAGAACAAGCCAAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: TRVNPPQPTTKT*VTQGSEQAKAS
Trigger: GCTGGCCTTGGCTTGTTCTGATCCCTGGGTAACCCAAGTCTTGGTAGTTGGCTGTGGTGGATTCACCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057071.2
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS CAA 72 bp GACAAGGGTGAATCCACCACAGCCAACTACCAAGACTaGGGTTACCCAGGGATCAGAACAAGCCAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: DKGESTTANYQD*GYPGIRTSQGQ
Trigger: CTGGCCTTGGCTTGTTCTGATCCCTGGGTAACCCAAGTCTTGGTAGTTGGCTGTGGTGGATTCACCCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057071.2
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS CAA 90 bp CACCGAGATCATCCGATTTCCTGCTTGAGATCCATGCCGAGAGGGTaGCAAATACGTGTACATAGTTGTTCCATAGTACAGAGCAACTGC +
Preference number: 6 (lower is better)
Translates to: HRDHPISCLRSMPRG*QIRVHSCSIVQSNC
Trigger: GCAGTTGCTCTGTACTATGGAACAACTATGTACACGTATTTGCAACCCTCTCGGCATGGATCTCAAGCAGGAAATCGGATGATCTCGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057071.2
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS CAA 90 bp GGGAATCAGCATGGTATAAAACACCGAGATCATCCGATTTCCTGCTaGAGATCCATGCCGAGAGGGTTGCAAATACGTGTACATAGTTGT +
Preference number: 6 (lower is better)
Translates to: GNQHGIKHRDHPISC*RSMPRGLQIRVHSC
Trigger: ACAACTATGTACACGTATTTGCAACCCTCTCGGCATGGATCTCAAGCAGGAAATCGGATGATCTCGGTGTTTTATACCATGCTGATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057071.2
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS CAA 72 bp CATCCGATTTCCTGCTTGAGATCCATGCCGAGAGGGTaGCAAATACGTGTACATAGTTGTTCCATAGTACAG +
Preference number: 6 (lower is better)
Translates to: HPISCLRSMPRG*QIRVHSCSIVQ
Trigger: CTGTACTATGGAACAACTATGTACACGTATTTGCAACCCTCTCGGCATGGATCTCAAGCAGGAAATCGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057071.2
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS TCA 72 bp CATTCAGCAGAAGCGAAGACTATGAACAAGCCCATTTaGGCCATGCATCCAAAGAAAGAAACTTCCTGTAGT +
Preference number: 6 (lower is better)
Translates to: HSAEAKTMNKPI*AMHPKKETSCS
Trigger: ACTACAGGAAGTTTCTTTCTTTGGATGCATGGCTCAAATGGGCTTGTTCATAGTCTTCGCTTCTGCTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057071.2
ENSMUST00000213463.2
ENSMUST00000213556.3
CDS TCA 72 bp AAGCCAAAATGTTACATTCAGCAGAAGCGAAGACTATaGACAAGCCCATTTGAGCCATGCATCCAAAGAAAG +
Preference number: 6 (lower is better)
Translates to: KPKCYIQQKRRL*TSPFEPCIQRK
Trigger: CTTTCTTTGGATGCATGGCTCAAATGGGCTTGTTCATAGTCTTCGCTTCTGCTGAATGTAACATTTTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057071.2
ENSMUST00000213463.2
ENSMUST00000213556.3