Pregenerated sensors for OLFR1322 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056281Ensembl transcript IDs: ENSMUST00000070304.3, ENSMUST00000217355.3
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCCTTCTCACTGGCAGATGGGAGCTACTCTATCATGGAAGAGATaGCTTATCTTTTCCATATGGACCTATCCCTCACACCTTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: FPSHWQMGATLSWKR*LIFSIWTYPSHLFF Trigger: GAAGAAAAGGTGTGAGGGATAGGTCCATATGGAAAAGATAAGTCATCTCTTCCATGATAGAGTAGCTCCCATCTGCCAGTGAGAAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR TCA 90 bp | TACAAGCTACAGTCCAGAGTTAAAGAAAGAATTATCGGGAATAGATaGTCTCCTCAACAGAAATCAGTTCTGTTCCCAGGAGGTGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: YKLQSRVKERIIGNR*SPQQKSVLFPGGED Trigger: GTCCTCACCTCCTGGGAACAGAACTGATTTCTGTTGAGGAGATCATCTATTCCCGATAATTCTTTCTTTAACTCTGGACTGTAGCTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CCA 90 bp | GTTCATAATGTTGCACCTAGAGGGTTGCAGATCCCTTTAGCTCCTTaGGTACTTTCTCTAGCTCCTCCAGTAGTTTTTAATGAAGTGATA | + |
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Preference number: 1 (lower is better) Translates to: VHNVAPRGLQIPLAP*VLSLAPPVVFNEVI Trigger: TATCACTTCATTAAAAACTACTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTCTAGGTGCAACATTATGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR TCA 90 bp | TTGTTGGGAATTGAATTTAGGACCTCTGCTCACTCTGGTCGGCCCTaGTCACTCCCGCCCAAAGATTTATTTATTATTATAAATAAGTAC | + |
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Preference number: 1 (lower is better) Translates to: LLGIEFRTSAHSGRP*SLPPKDLFIIINKY Trigger: GTACTTATTTATAATAATAAATAAATCTTTGGGCGGGAGTGATCAGGGCCGACCAGAGTGAGCAGAGGTCCTAAATTCAATTCCCAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGCCGCTAGAGTCAAGAGGAGGTGAGGACACTTaGTTCTTCCCTGCCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSDGQLGHLLIHMPLESRGGEDT*FFPALA Trigger: AGCCAAGGCAGGGAAGAATCAAGTGTCCTCACCTCC...TCTTGACTCTAGCGGCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CAA 90 bp | AGAGCTCCAGGGTACTGGTTAGTTCATAATGTTGCACCTATAGGGTaGCAGATCTCTTTAGCTCCTTGTATACTTTCTCTAGCTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: RAPGYWLVHNVAPIG*QISLAPCILSLAPP Trigger: TGGAGGAGCTAGAGAAAGTATACAAGGAGCTAAAGAGATCTGCAACCCTATAGGTGCAACATTATGAACTAACCAGTACCCTGGAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGCCGCTAGAGTCAAGACTGCCTTGGCTTAGCTaGGCAAATGTTAAATGGATA | + |
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Preference number: 2 (lower is better) Translates to: SSDGQLGHLLIHMPLESRLPWLS*ANVKWI Trigger: TATCCATTTAACATTTGCTCAGCTAAGCCAAGGCAG...TCTTGACTCTAGCGGCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTCACACCTTTTCTTCACCATACATCTTTTCCCTAAGTGTGTTATACAAGCTCATGTAGCTCAGTATTaGGAGCAAGCTGGTGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PSHLFFTIHLFPKCVIQAHVAQY*EQAGVK Trigger: TTTCACACCAGCTTGCTCTCAATACTGAGCTACATG...AGCTTGTATAACACACTTAGGGAAAAGATGTATGGTGAAGAAAAGGTGTGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGCCGCTAGAGTCAAGAGGTCAGTGTACAGAATaGAGAATTCATTCAAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SSDGQLGHLLIHMPLESRGQCTE*RIHSKE Trigger: CTCTTTTGAATGAATTCTTCATTCTGTACACTGACC...TCTTGACTCTAGCGGCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGAAATCCAATTAGCTATAATTACTGTGTTGCATGGATGTGTTTCCTTCTCATCTGTTCCCAGGAGGTaGGGACACTTGATTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: EEIQLAIITVLHGCVSFSSVPRR*GHLILP Trigger: GGGAAGAATCAAGTGTCCTCACCTCCTGGGAACAGA...TGAGAAGGAAACACATCCATGCAACACAGTAATTATAGCTAATTGGATTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CAA 90 bp | TATCATGACTTTGAAGAGAAACTCTCAGATTTCAATTGCATTCCCTaGTCTTTTCCTTCATCTCCCCTCTCATCTCAGCCATGTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: YHDFEEKLSDFNCIP*SFPSSPLSSQPCSP Trigger: AGGAGAACATGGCTGAGATGAGAGGGGAGATGAAGGAAAAGACAAGGGAATGCAATTGAAATCTGAGAGTTTCTCTTCAAAGTCATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTCACACCTTTTCTTCACCATACATCTTTTCCCTAAGTGTGTTATACAAGCTGTAATCCACTGTAGCTaGATCCAAATTGTTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PSHLFFTIHLFPKCVIQAVIHCS*IQIVEK Trigger: CTTCTCAACAATTTGGATTCAGCTACAGTGGATTAC...AGCTTGTATAACACACTTAGGGAAAAGATGTATGGTGAAGAAAAGGTGTGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGAAATCCAATTAGCTATAATTACTGTGTTGCATGGATGTGTTTCCTTCTCACTATCATGGAAGAGATaGCTTATCTTTTCCATATGG | + |
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Preference number: 2 (lower is better) Translates to: EEIQLAIITVLHGCVSFSLSWKR*LIFSIW Trigger: CCATATGGAAAAGATAAGTCATCTCTTCCATGATAG...TGAGAAGGAAACACATCCATGCAACACAGTAATTATAGCTAATTGGATTTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGAAATCCAATTAGCTATAATTACTGTGTTGCATGGATGTGTTTCCTTCTCACTCTCAGATTTCAATTaGATTCCCTTGTCTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: EEIQLAIITVLHGCVSFSLSDFN*IPLSFP Trigger: AGGAAAAGACAAGGGAATGCAATTGAAATCTGAGAG...TGAGAAGGAAACACATCCATGCAACACAGTAATTATAGCTAATTGGATTTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR TCA 72 bp | ATCTCCTCAACAGAAATCAGTTCTGTTCCCAGGAGGTaGGGACACTTGATTCTTCCCTGCCTTGGCTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: ISSTEISSVPRR*GHLILPCLGLA Trigger: AGCTAAGCCAAGGCAGGGAAGAATCAAGTGTCCTCACCTCCTGGGAACAGAACTGATTTCTGTTGAGGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR TCA 72 bp | CTCATTGTGGGTGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTTA | + |
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Preference number: 3 (lower is better) Translates to: LIVGGCEPPCGC*DLNSGPLEEQL Trigger: TAACTGCTCTTCCAAAGGTCCTGAGTTCAAATCTCAGCAACCACATGGTGGCTCACAACCACCCACAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR TCA 72 bp | CACTGGCAGATGGGAGCTACTCTATCATGGAAGAGATaGCTTATCTTTTCCATATGGACCTATCCCTCACAC | + |
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Preference number: 3 (lower is better) Translates to: HWQMGATLSWKR*LIFSIWTYPSH Trigger: GTGTGAGGGATAGGTCCATATGGAAAAGATAAGTCATCTCTTCCATGATAGAGTAGCTCCCATCTGCCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR TCA 72 bp | ATAAAGTTTGCCTGTCCAGTGGGCCTCTTTTTCCAGTaGTGGCCGACTAGGCCATCTTTTGATACATATGCT | + |
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Preference number: 3 (lower is better) Translates to: IKFACPVGLFFQ*WPTRPSFDTYA Trigger: AGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAAAGAGGCCCACTGGACAGGCAAACTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CCA 72 bp | TTCAGACATACCAGAAGAGATCATCAGATCTCATTGTaGGTGGTTGTGAGCCACCATGTGGTTGCTGAGATT | + |
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Preference number: 3 (lower is better) Translates to: FRHTRRDHQISL*VVVSHHVVAEI Trigger: AATCTCAGCAACCACATGGTGGCTCACAACCACCCACAATGAGATCTGATGATCTCTTCTGGTATGTCTGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CCA 72 bp | GTTGCACCTAGAGGGTTGCAGATCCCTTTAGCTCCTTaGGTACTTTCTCTAGCTCCTCCAGTAGTTTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: VAPRGLQIPLAP*VLSLAPPVVFN Trigger: ATTAAAAACTACTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTCTAGGTGCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CCA 72 bp | TGTGTTGCATGGATGTGTTTCCTTCTCACTGGCAGATaGGAGCTACTCTATCATGGAAGAGATGACTTATCT | + |
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Preference number: 3 (lower is better) Translates to: CVAWMCFLLTGR*ELLYHGRDDLS Trigger: AGATAAGTCATCTCTTCCATGATAGAGTAGCTCCCATCTGCCAGTGAGAAGGAAACACATCCATGCAACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR CAA 90 bp | TCCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGCCGCTAGAGTCAAGAACTCTCAGATTTCAATaGCATTCCCTTGTCTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: SSDGQLGHLLIHMPLESRTLRFQ*HSLVFS Trigger: GGAAAAGACAAGGGAATGCAATTGAAATCTGAGAGT...TCTTGACTCTAGCGGCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR TCA 72 bp | ATAAAGTTTGCAAGTCCAATGGGCTTCTCTTTCCAGTaGTGGCCAACTAGGCCATCTTTTGATACATATGCC | + |
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Preference number: 3 (lower is better) Translates to: IKFASPMGFSFQ*WPTRPSFDTYA Trigger: GGCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGGAAAGAGAAGCCCATTGGACTTGCAAACTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR TCA 72 bp | ATTTATTTTTCTTGGGGAGAGTTCTCTTTGAAGTCCTaGCTGTCATGTAGCTCAGTATTGAGAGCAAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: IYFSWGEFSLKS*LSCSSVLRASW Trigger: CCAGCTTGCTCTCAATACTGAGCTACATGACAGTCAGGACTTCAAAGAGAACTCTCCCCAAGAAAAATAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR TCA 72 bp | ATTGAATTTAGGACCTCTGCTCACTCTGGTCGGCCCTaGTCACTCCCGCCCAAAGATTTATTTATTATTATA | + |
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Preference number: 3 (lower is better) Translates to: IEFRTSAHSGRP*SLPPKDLFIII Trigger: TATAATAATAAATAAATCTTTGGGCGGGAGTGATCAGGGCCGACCAGAGTGAGCAGAGGTCCTAAATTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR CAA 90 bp | CCCTCACACCTTTTCTTCACCATACATCTTTTCCCTAAGTGTGTTATACAAGCTCTAAGGAAAATGGGTTaGCCTTCCATTGTCAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: PSHLFFTIHLFPKCVIQALRKMG*PSIVKE Trigger: TTCCTTGACAATGGAAGGCAAACCCATTTTCCTTAG...AGCTTGTATAACACACTTAGGGAAAAGATGTATGGTGAAGAAAAGGTGTGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR CAA 90 bp | CCCTCACACCTTTTCTTCACCATACATCTTTTCCCTAAGTGTGTTATACAAGCTTTCAATTGCATTCCCTaGTCTTTTCCTTCATCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PSHLFFTIHLFPKCVIQAFNCIP*SFPSSP Trigger: GGGAGATGAAGGAAAAGACAAGGGAATGCAATTGAA...AGCTTGTATAACACACTTAGGGAAAAGATGTATGGTGAAGAAAAGGTGTGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR TCA 72 bp | CAGTCCAGAGTTAAAGAAAGAATTATCGGGAATAGATaGTCTCCTCAACAGAAATCAGTTCTGTTCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: QSRVKERIIGNR*SPQQKSVLFPG Trigger: TCCTGGGAACAGAACTGATTTCTGTTGAGGAGATCATCTATTCCCGATAATTCTTTCTTTAACTCTGGACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CCA 72 bp | AGAAGAAATCCAATTAGCTATAATTACTGTGTTGCATaGATGTGTTTCCTTCTCACTGGCAGATGGGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: RRNPISYNYCVA*MCFLLTGRWEL Trigger: TAGCTCCCATCTGCCAGTGAGAAGGAAACACATCCATGCAACACAGTAATTATAGCTAATTGGATTTCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR CAA 90 bp | ATGATTCCCACCTCACAAGATGTACCTTCCCTAAATTTAGTTTTCCAACCAAGAAACCAGCCACATTACTaGAATATTCCTGAACTGAGA | + |
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Preference number: 3 (lower is better) Translates to: MIPTSQDVPSLNLVFQPRNQPHY*NIPELR Trigger: TCTCAGTTCAGGAATATTCAAGTAATGTGGCTGGTT...TCTTGGTTGGAAAACTAAATTTAGGGAAGGTACATCTTGTGAGGTGGGAATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGAAATCCAATTAGCTATAATTACTGTGTTGCATGGATGTGTTTCCTTCTCATCATGTAGCTCAGTATaGAGAGCAAGCTGGTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: EEIQLAIITVLHGCVSFSSCSSV*RASWCE Trigger: TTCACACCAGCTTGCTCTCAATACTGAGCTACATGA...TGAGAAGGAAACACATCCATGCAACACAGTAATTATAGCTAATTGGATTTCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR GCA 72 bp | TATCATGACTTTGAAGAGAAACTCTCAGATTTCAATTaGATTCCCTTGTCTTTTCCTTCATCTCCCCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: YHDFEEKLSDFN*IPLSFPSSPLS Trigger: TGAGAGGGGAGATGAAGGAAAAGACAAGGGAATGCAATTGAAATCTGAGAGTTTCTCTTCAAAGTCATGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CCA 72 bp | AAATGGGTTTGCCTTCCATTGTCAAGGAAATTGTTATaGACACTTCAGGGTTGTGAATTTTCCTCCGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: KWVCLPLSRKLL*TLQGCEFSSVN Trigger: ATTAACGGAGGAAAATTCACAACCCTGAAGTGTCCATAACAATTTCCTTGACAATGGAAGGCAAACCCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGAAATCCAATTAGCTATAATTACTGTGTTGCATGGATGTGTTTCCTTCTCAGCTGAATCCAAATTGTaGAGAAGGACTTTGTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: EEIQLAIITVLHGCVSFSAESKL*RRTLSL Trigger: TAAGGACAAAGTCCTTCTCAACAATTTGGATTCAGC...TGAGAAGGAAACACATCCATGCAACACAGTAATTATAGCTAATTGGATTTCTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CAA 72 bp | GTCTTCAGACATACCAGAAGAGATCATCAGATCTCATaGTGGGTGGTTGTGAGCCACCATGTGGTTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VFRHTRRDHQIS*WVVVSHHVVAE Trigger: CTCAGCAACCACATGGTGGCTCACAACCACCCACAATGAGATCTGATGATCTCTTCTGGTATGTCTGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CAA 72 bp | TGTTGCACCTATAGGGTTGCAGATCTCTTTAGCTCCTaGTATACTTTCTCTAGCTCCTCCATTGGGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: CCTYRVADLFSS*YTFSSSSIGGP Trigger: AGGGCCCCCAATGGAGGAGCTAGAGAAAGTATACAAGGAGCTAAAGAGATCTGCAACCCTATAGGTGCAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR GCA 90 bp | GAAGAAATCCAATTAGCTATAATTACTGTGTTGCATGGATGTGTTTCCTTCTCAGTGGAGAAAGCCCTCTaGTTCCCTGTGGTCGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: EEIQLAIITVLHGCVSFSVEKAL*FPVVEG Trigger: CCCTTCGACCACAGGGAAGCAGAGGGCTTTCTCCAC...TGAGAAGGAAACACATCCATGCAACACAGTAATTATAGCTAATTGGATTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR CCA 90 bp | TTGAAGAGAAACTCTCAGATTTCAATTGCATTCCCTTGTCTTTTCCTTCATCTCCTGACAAGCACAGGCTaGCAAGGAGATAGGCACATG | + |
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Preference number: 4 (lower is better) Translates to: LKRNSQISIAFPCLFLHLLTSTG*QGDRHM Trigger: CATGTGCCTATCTCCTTGCCAGCCTGTGCTTGTCAG...GAGATGAAGGAAAAGACAAGGGAATGCAATTGAAATCTGAGAGTTTCTCTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR TCA 90 bp | CCCTCACACCTTTTCTTCACCATACATCTTTTCCCTAAGTGTGTTATACAAGCTCCAAAAAGAAGAAACTaGAGGCCATGGAGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PSHLFFTIHLFPKCVIQAPKRRN*RPWRSP Trigger: TGGAGATCTCCATGGCCTTCAGTTTCTTCTTTTTGG...AGCTTGTATAACACACTTAGGGAAAAGATGTATGGTGAAGAAAAGGTGTGAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR TCA 90 bp | CCCTCACACCTTTTCTTCACCATACATCTTTTCCCTAAGTGTGTTATACAAGCTTTGTTGTGGTGTAGCTaGTCTCTAGGAAGGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PSHLFFTIHLFPKCVIQALLWCS*SLGRRS Trigger: ACTTCTCCTTCCTAGAGATCAGCTACACCACAACAA...AGCTTGTATAACACACTTAGGGAAAAGATGTATGGTGAAGAAAAGGTGTGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR TCA 90 bp | CCCTCACACCTTTTCTTCACCATACATCTTTTCCCTAAGTGTGTTATACAAGCTGTCATTTCAGCTACTTaGGTATTAGTGCAGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: PSHLFFTIHLFPKCVIQAVISAT*VLVQAS Trigger: ACTGGCCTGCACTAATACTCAAGTAGCTGAAATGAC...AGCTTGTATAACACACTTAGGGAAAAGATGTATGGTGAAGAAAAGGTGTGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR TCA 90 bp | TCCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGCCGCTAGAGTCAAGAAATATACTTTCATATTaGGGCATTGATGGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SSDGQLGHLLIHMPLESRNILSY*GIDGKP Trigger: TGGCTTCCCATCAATGCCTCAATATGAAAGTATATT...TCTTGACTCTAGCGGCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR GCA 90 bp | TCCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGCCGCTAGAGTCAAGATTGACCAGGTATGTATaGCATTGTGTCAATTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SSDGQLGHLLIHMPLESRLTRYV*HCVNFL Trigger: GAGAAAATTGACACAATGGCATACATACCTGGTCAA...TCTTGACTCTAGCGGCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CAA 72 bp | TTTGAAGAGAAACTCTCAGATTTCAATTGCATTCCCTaGTCTTTTCCTTCATCTCCCCTCTCATCTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FEEKLSDFNCIP*SFPSSPLSSQP Trigger: TGGCTGAGATGAGAGGGGAGATGAAGGAAAAGACAAGGGAATGCAATTGAAATCTGAGAGTTTCTCTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR TCA 90 bp | ATGATTCCCACCTCACAAGATGTACCTTCCCTAAATTTAGTTTTCCAACCAAGAAAATACATGGGTGTGTaGAGGGAGCAATCAGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: MIPTSQDVPSLNLVFQPRKYMGV*REQSVD Trigger: ATCCACTGATTGCTCCCTTCACACACCCATGTATTT...TCTTGGTTGGAAAACTAAATTTAGGGAAGGTACATCTTGTGAGGTGGGAATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR TCA 90 bp | TTGAAGAGAAACTCTCAGATTTCAATTGCATTCCCTTGTCTTTTCCTTCATCTCTGCAGGCCAGTTTCATaGTGGGCTTCAAATCACAGA | + |
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Preference number: 4 (lower is better) Translates to: LKRNSQISIAFPCLFLHLCRPVS*WASNHR Trigger: TCTGTGATTTGAAGCCCATCATGAAACTGGCCTGCA...GAGATGAAGGAAAAGACAAGGGAATGCAATTGAAATCTGAGAGTTTCTCTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR TCA 90 bp | CCCTCACACCTTTTCTTCACCATACATCTTTTCCCTAAGTGTGTTATACAAGCTTCAGAATGGTGCAAATaGTGTGAATATAGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PSHLFFTIHLFPKCVIQASEWCK*CEYRKP Trigger: TGGCTTCCTATATTCACATCATTTGCACCATTCTGA...AGCTTGTATAACACACTTAGGGAAAAGATGTATGGTGAAGAAAAGGTGTGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CAA 72 bp | GGGTACTGGTTAGTTCATAATGTTGCACCTATAGGGTaGCAGATCTCTTTAGCTCCTTGTATACTTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: GYWLVHNVAPIG*QISLAPCILSL Trigger: TAGAGAAAGTATACAAGGAGCTAAAGAGATCTGCAACCCTATAGGTGCAACATTATGAACTAACCAGTACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR CCA 90 bp | ATGATTCCCACCTCACAAGATGTACCTTCCCTAAATTTAGTTTTCCAACCAAGAAGTGGTCAATCTCATTaGCAGAACAAAATGTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: MIPTSQDVPSLNLVFQPRSGQSH*QNKMLS Trigger: GCTTAACATTTTGTTCTGCCAATGAGATTGACCACT...TCTTGGTTGGAAAACTAAATTTAGGGAAGGTACATCTTGTGAGGTGGGAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| 3UTR CAA 72 bp | GTTGTGAATTTTCCTCCGTTAATAGAAGCAGTGAATTaGGTGCTAGATAAACCATGGACTCACTCTCAAATT | + |
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Preference number: 4 (lower is better) Translates to: VVNFPPLIEAVN*VLDKPWTHSQI Trigger: AATTTGAGAGTGAGTCCATGGTTTATCTAGCACCAAATTCACTGCTTCTATTAACGGAGGAAAATTCACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR CAA 90 bp | ATGATTCCCACCTCACAAGATGTACCTTCCCTAAATTTAGTTTTCCAACCAAGAAGTCATTTCAGCTACTaGAGTATTAGTGCAGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: MIPTSQDVPSLNLVFQPRSHFSY*SISAGQ Trigger: CTGGCCTGCACTAATACTCAAGTAGCTGAAATGACT...TCTTGGTTGGAAAACTAAATTTAGGGAAGGTACATCTTGTGAGGTGGGAATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR CAA 90 bp | GAAGAAATCCAATTAGCTATAATTACTGTGTTGCATGGATGTGTTTCCTTCTCAGGAGGAAGCATTCTGTaGCCACCAAAGATGCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: EEIQLAIITVLHGCVSFSGGSIL*PPKMQK Trigger: TTTTTGCATCTTTGGTGGCAACAGAATGCTTCCTCC...TGAGAAGGAAACACATCCATGCAACACAGTAATTATAGCTAATTGGATTTCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS-3UTR CAA 90 bp | ATGATTCCCACCTCACAAGATGTACCTTCCCTAAATTTAGTTTTCCAACCAAGAAAGTGGTCAATCTCATaGGCAGAACAAAATGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: MIPTSQDVPSLNLVFQPRKWSIS*AEQNVK Trigger: CTTAACATTTTGTTCTGCCAATGAGATTGACCACTT...TCTTGGTTGGAAAACTAAATTTAGGGAAGGTACATCTTGTGAGGTGGGAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217355.3 |
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| CDS TCA 72 bp | AGAAAGCAACTTCAATATACTTTCATATTGAGGCATTaGTGGGAAGCCATAGACAATGCCCAGAGTCCCATA | + |
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Preference number: 6 (lower is better) Translates to: RKQLQYTFILRH*WEAIDNAQSPI Trigger: TATGGGACTCTGGGCATTGTCTATGGCTTCCCATCAATGCCTCAATATGAAAGTATATTGAAGTTGCTTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070304.3 ENSMUST00000217355.3 |
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