Pregenerated sensors for OLFR1321 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067971Ensembl transcript IDs: ENSMUST00000088876.5, ENSMUST00000215373.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCTTCTTCAATTGATGCCTGACAAAGCCATCCTCTGCTACATATaGAGCTGGACCCATGGGTCCCTCCATGTTTACTCTGGTTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SLLQLMPDKAILCYI*SWTHGSLHVYSGWW Trigger: CCACCAACCAGAGTAAACATGGAGGGACCCATGGGTCCAGCTGCATATGTAGCAGAGGATGGCTTTGTCAGGCATCAATTGAAGAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR CCA 90 bp | CTACCCACCCACTCCTGCCTCCCAATCTTCACATATCTCCTCTACTaGGGCATCAAACCTTCACAGGACCAATGGTCTCTTCTTCAATTG | + |
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Preference number: 1 (lower is better) Translates to: LPTHSCLPIFTYLLY*GIKPSQDQWSLLQL Trigger: CAATTGAAGAAGAGACCATTGGTCCTGTGAAGGTTTGATGCCCCAGTAGAGGAGATATGTGAAGATTGGGAGGCAGGAGTGGGTGGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR GCA 90 bp | GACCAATGGTCTCTTCTTCAATTGATGCCTGACAAAGCCATCCTCTaGTACATATGCAGCTGGACCCATGGGTCCCTCCATGTTTACTCT | + |
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Preference number: 1 (lower is better) Translates to: DQWSLLQLMPDKAIL*YICSWTHGSLHVYS Trigger: AGAGTAAACATGGAGGGACCCATGGGTCCAGCTGCATATGTAGCAGAGGATGGCTTTGTCAGGCATCAATTGAAGAAGAGACCATTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR CCA 90 bp | CTTCAATTGATGCCTGACAAAGCCATCCTCTGCTACATATGCAGCTaGACCCATGGGTCCCTCCATGTTTACTCTGGTTGGTGGTTTAGT | + |
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Preference number: 1 (lower is better) Translates to: LQLMPDKAILCYICS*THGSLHVYSGWWFS Trigger: ACTAAACCACCAACCAGAGTAAACATGGAGGGACCCATGGGTCCAGCTGCATATGTAGCAGAGGATGGCTTTGTCAGGCATCAATTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR CCA 90 bp | ACAACAGTGTCTGGGCATGGCTCTCCAGGTAGATCAATCTCTGGATaGCCTTTTCTTCAGTCTCTGGCCGAAACTTTGTCTCTGTATTTG | + |
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Preference number: 1 (lower is better) Translates to: TTVSGHGSPGRSISG*PFLQSLAETLSLYL Trigger: CAAATACAGAGACAAAGTTTCGGCCAGAGACTGAAGAAAAGGCCATCCAGAGATTGATCTACCTGGAGAGCCATGCCCAGACACTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR CCA 90 bp | TCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTaGCAGAGCCTCTCAGGAGATAGCTATATCAGGCTCCTGTCAGTA | + |
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Preference number: 1 (lower is better) Translates to: SNGWLQAFTSVFVKL*QSLSGDSYIRLLSV Trigger: TACTGACAGGAGCCTGATATAGCTATCTCCTGAGAGGCTCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR CCA 90 bp | AAGTCTTTCCCAAACTGCTTGGCATTCTTGGGCTCATTGTGTAAGTaGAAGTTTGGCATGGCTGGCCTGCTTTTGGTGTTTCTAGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: KSFPNCLAFLGSLCK*KFGMAGLLLVFLEV Trigger: TACCTCTAGAAACACCAAAAGCAGGCCAGCCATGCCAAACTTCCACTTACACAATGAGCCCAAGAATGCCAAGCAGTTTGGGAAAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR CCA 90 bp | TTCACATATCTCCTCTACTGGGGCATCAAACCTTCACAGGACCAATaGTCTCTTCTTCAATTGATGCCTGACAAAGCCATCCTCTGCTAC | + |
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Preference number: 1 (lower is better) Translates to: FTYLLYWGIKPSQDQ*SLLQLMPDKAILCY Trigger: GTAGCAGAGGATGGCTTTGTCAGGCATCAATTGAAGAAGAGACCATTGGTCCTGTGAAGGTTTGATGCCCCAGTAGAGGAGATATGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR GCA 90 bp | ACAGCTTGCTCTTCCTTCTTCTTGAGCTTCATGTGGTCTCTGAATTaGCAGACACTACAAAGAAACCTGATGTCTGTCAACAGAGGATTG | + |
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Preference number: 1 (lower is better) Translates to: TACSSFFLSFMWSLN*QTLQRNLMSVNRGL Trigger: CAATCCTCTGTTGACAGACATCAGGTTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATGAAGCTCAAGAAGAAGGAAGAGCAAGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR CCA 90 bp | GTGGAGAGATTCTTGAAGGTATTGGCATGTGGATACATACAGACATaGGTAGGTAATTTAACCAGGAAACCTTTATGCCAACAAATAATT | + |
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Preference number: 1 (lower is better) Translates to: VERFLKVLACGYIQT*VGNLTRKPLCQQII Trigger: AATTATTTGTTGGCATAAAGGTTTCCTGGTTAAATTACCTACCCATGTCTGTATGTATCCACATGCCAATACCTTCAAGAATCTCTCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGACAACAGGGAGCTCTGTaGGGGGCCGGGAAGGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: SPMVGCKHSPLYLSNSGRQQGAL*GAGKGV Trigger: TACTCCCTTCCCGGCCCCCCACAGAGCTCCCTGTTG...TCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | CCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGATCAATCTCTGGATGGAGTGGAAGTTTGGCATaGCTGGCCTGCTTTTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: PSTTVSGHGSPGRSISGWSGSLA*LACFWC Trigger: ACACCAAAAGCAGGCCAGCCATGCCAAACTTCCACT...CCATCCAGAGATTGATCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | CCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGATCAATCTCTGGATGGGGCTCATTGTGTAAGTaGAAGTTTGGCATGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PSTTVSGHGSPGRSISGWGSLCK*KFGMAG Trigger: GCCAGCCATGCCAAACTTCCACTTACACAATGAGCC...CCATCCAGAGATTGATCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGCTACATATGCAGCTGGACCCATGGGTCCCTCCATGTTTACTCTGGTTGTGTCAATCAAGTTCCTaGCCCCCTCAAAAGAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: PLLHMQLDPWVPPCLLWLCQSSS*PPQKKH Trigger: GTGCTTCTTTTGAGGGGGTCAGGAACTTGATTGACA...CAACCAGAGTAAACATGGAGGGACCCATGGGTCCAGCTGCATATGTAGCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGTACTTCTTGCCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGATCTCTCCTCTGCTACTaGTTTCCCTGGAAGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: CQYFLPSTTVSGHGSPGRSLLCY*FPWKKG Trigger: TCCCTTCTTCCAGGGAAATCAGTAGCAGAGGAGAGA...TCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGGCAAGAAGTACTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTCACAGGACCAATGGTCTCTTCTTCAATTGATGCCTGACAAAGCCATCCTCTTTCCACTGTGCATCTaGGCAGAAGGCAGCACCCCT | + |
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Preference number: 2 (lower is better) Translates to: PSQDQWSLLQLMPDKAILFPLCI*AEGSTP Trigger: AGGGGTGCTGCCTTCTGCTCAGATGCACAGTGGAAA...GAGGATGGCTTTGTCAGGCATCAATTGAAGAAGAGACCATTGGTCCTGTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCATGGCTCTCCAGGTAGATCAATCTCTGGATGGCCTTTTCTTCAGTCTCGCTCCCTTTGAGCCCTaGTTTCTCCTTAGTACACTC | + |
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Preference number: 2 (lower is better) Translates to: LGMALQVDQSLDGLFFSLAPFEP*FLLSTL Trigger: GAGTGTACTAAGGAGAAAGCAGGGCTCAAAGGGAGC...GAGACTGAAGAAAAGGCCATCCAGAGATTGATCTACCTGGAGAGCCATGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR GCA 90 bp | AGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGACTCATGGGGAAAGGATaGTCTGGGGATGCAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SPMVGCKHSPLYLSNSGRLMGKG*SGDAEG Trigger: GCCTTCTGCATCCCCAGAGCATCCTTTCCCCATGAG...TCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGGCATGGCTCTCCAGGTAGATCAATCTCTGGATGGCCTTTTCTTCAGTCTCGTGTGGAGAGATTCTTaGAGGTATTGGCATGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LGMALQVDQSLDGLFFSLVWRDS*RYWHVD Trigger: ATCCACATGCCAATACCTTCAAGAATCTCTCCACAC...GAGACTGAAGAAAAGGCCATCCAGAGATTGATCTACCTGGAGAGCCATGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGCTACATATGCAGCTGGACCCATGGGTCCCTCCATGTTTACTCTGGTTGGGGAGAGGGGAAACATaGTGCAATTCTATTTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: PLLHMQLDPWVPPCLLWLGRGET*CNSISK Trigger: CTTTGAAATAGAATTGCATCATGTTTCCCCTCTCCC...CAACCAGAGTAAACATGGAGGGACCCATGGGTCCAGCTGCATATGTAGCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGATACAGTGAAGGGCCTTGCTAGGGAGAAGCTAAGGGAAGATAATAGGAAGAGAAGCACAAGCTCATaGGGAAAGGATGCTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: QDTVKGLAREKLREDNRKRSTSS*GKDALG Trigger: CCCCAGAGCATCCTTTCCCCATGAGCTTGTGCTTCT...CTTCCTATTATCTTCCCTTAGCTTCTCCCTAGCAAGGCCCTTCACTGTATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTACTTCTTGCCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGACTTTCCCAAACTGCTTaGCATTCTTGGGCTCATTGT | + |
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Preference number: 2 (lower is better) Translates to: CQYFLPSTTVSGHGSPGRLSQTA*HSWAHC Trigger: ACAATGAGCCCAAGAATGCCAAGCAGTTTGGGAAAG...TCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGGCAAGAAGTACTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTACTTCTTGCCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGATTGATATTACTCAGTTaGAGGTGCCTCTGGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: CQYFLPSTTVSGHGSPGRLILLS*RCLWEK Trigger: TTTCTCCCAGAGGCACCTCCAACTGAGTAATATCAA...TCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGGCAAGAAGTACTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR CAA 90 bp | GATCTAAGAAAGTCTTTCCCAAACTGCTTGGCATTCTTGGGCTCATaGTGTAAGTGGAAGTTTGGCATGGCTGGCCTGCTTTTGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: DLRKSFPNCLAFLGS*CKWKFGMAGLLLVF Trigger: AAACACCAAAAGCAGGCCAGCCATGCCAAACTTCCACTTACACAATGAGCCCAAGAATGCCAAGCAGTTTGGGAAAGACTTTCTTAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | AGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGAGACTGTGTCTATGTGTaGAGTGTGGAGAGATTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SPMVGCKHSPLYLSNSGRDCVYV*SVERFL Trigger: CAAGAATCTCTCCACACTTCACACATAGACACAGTC...TCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTCACAGGACCAATGGTCTCTTCTTCAATTGATGCCTGACAAAGCCATCCTCCACTACAAAGAAACCTaGTGTCTGTCAACAGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: PSQDQWSLLQLMPDKAILHYKET*CLSTED Trigger: ATCCTCTGTTGACAGACATCAGGTTTCTTTGTAGTG...GAGGATGGCTTTGTCAGGCATCAATTGAAGAAGAGACCATTGGTCCTGTGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTACTTCTTGCCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGAATAGCAGGTTTCATGTaGCATCTACATATGTATGCA | + |
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Preference number: 2 (lower is better) Translates to: CQYFLPSTTVSGHGSPGRIAGFM*HLHMYA Trigger: TGCATACATATGTAGATGCCACATGAAACCTGCTAT...TCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGGCAAGAAGTACTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGCTACATATGCAGCTGGACCCATGGGTCCCTCCATGTTTACTCTGGTTGACAAAAGAACACACATaGTATGTAGTCACTGATAAG | + |
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Preference number: 2 (lower is better) Translates to: PLLHMQLDPWVPPCLLWLTKEHT*YVVTDK Trigger: CTTATCAGTGACTACATACCATGTGTGTTCTTTTGT...CAACCAGAGTAAACATGGAGGGACCCATGGGTCCAGCTGCATATGTAGCAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR CAA 90 bp | GACAGCTTGCTCTTCCTTCTTCTTGAGCTTCATGTGGTCTCTGAATaGCCAGACACTACAAAGAAACCTGATGTCTGTCAACAGAGGATT | + |
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Preference number: 2 (lower is better) Translates to: DSLLFLLLELHVVSE*PDTTKKPDVCQQRI Trigger: AATCCTCTGTTGACAGACATCAGGTTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATGAAGCTCAAGAAGAAGGAAGAGCAAGCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTCACAGGACCAATGGTCTCTTCTTCAATTGATGCCTGACAAAGCCATCCTCATGGATATAGCACAATaGCTGTGTCTATGTGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PSQDQWSLLQLMPDKAILMDIAQ*LCLCVK Trigger: CTTCACACATAGACACAGTCATTGTGCTATATCCAT...GAGGATGGCTTTGTCAGGCATCAATTGAAGAAGAGACCATTGGTCCTGTGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGTTTCTCTTGTTCAATaGATGAAGTGTGGTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SVQWLAASIHLCICQTLAVSLVQ*MKCGQP Trigger: AGGCTGACCACACTTCATTCATTGAACAAGAGAAAC...TGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGACTTTTCTTCAGTCTCTaGCCGAAACTTTGTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SPMVGCKHSPLYLSNSGRLFFSL*PKLCLC Trigger: ACAGAGACAAAGTTTCGGCCAGAGACTGAAGAAAAG...TCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGAAGATCAATCTCTGGATaGCCTTTTCTTCAGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SPMVGCKHSPLYLSNSGRRSISG*PFLQSL Trigger: CAGAGACTGAAGAAAAGGCCATCCAGAGATTGATCT...TCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGATACAGTGAAGGGCCTTGCTAGGGAGAAGCTAAGGGAAGATAATAGGAAGGATAGGCAGGAAGGTTaGCTTTATATCTTGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: QDTVKGLAREKLREDNRKDRQEG*LYILVL Trigger: AAGAACCAAGATATAAAGTCAACCTTCCTGCCTATC...CTTCCTATTATCTTCCCTTAGCTTCTCCCTAGCAAGGCCCTTCACTGTATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTCACAGGACCAATGGTCTCTTCTTCAATTGATGCCTGACAAAGCCATCCTCCTCAGTCTTAGTTATTaGGAGTTTCCAAATCCATCT | + |
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Preference number: 2 (lower is better) Translates to: PSQDQWSLLQLMPDKAILLSLSY*EFPNPS Trigger: AGATGGATTTGGAAACTCTCAATAACTAAGACTGAG...GAGGATGGCTTTGTCAGGCATCAATTGAAGAAGAGACCATTGGTCCTGTGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGTAACAGGTGTCTTTGCTGATCACTTCCATGAAACATTTGGGCTTTATCCTAGCAAGGGGCAGAGTTaGTATTACTCAGTTGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: LVTGVFADHFHETFGLYPSKGQS*YYSVGG Trigger: ACCTCCAACTGAGTAATATCAACTCTGCCCCTTGCT...AGGATAAAGCCCAAATGTTTCATGGAAGTGATCAGCAAAGACACCTGTTACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCATTAGTCTGTAAAAACTaGAGGGAAAAATCTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SVQWLAASIHLCICQTLALVCKN*REKSLL Trigger: GAGGAGAGATTTTTCCCTTCAGTTTTTACAGACTAA...TGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCAAGCAAGAAAGGAAGAAGCATTTATGGCATGAAGCTGTTGTTGCAAGCAAAGGAAACAATGCATaGCAGAGTAGCCTGGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: KSKQERKKHLWHEAVVASKGNNA*QSSLVE Trigger: CTCTACCAGGCTACTCTGTCATGCATTGTTTCCTTT...GCTTGCAACAACAGCTTCATGCCATAAATGCTTCTTCCTTTCTTGCTTGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | GCATTGACAGCTTGCTCTTCCTTCTTCTTGAGCTTCATGTGGTCTCTGAATTGCTGGCTTTCTTTAGACTaGAAAATTCTCTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ALTACSSFFLSFMWSLNCWLSLD*KILSLS Trigger: AGAGAGAGAGAGAATTTTTCAGTCTAAAGAAAGCCA...GCAATTCAGAGACCACATGAAGCTCAAGAAGAAGGAAGAGCAAGCTGTCAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGTAACAGGTGTCTTTGCTGATCACTTCCATGAAACATTTGGGCTTTATCCTGAAGCATTTATGGCATaGAGCTGTTGTTGCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LVTGVFADHFHETFGLYPEAFMA*SCCCKL Trigger: CAGCTTGCAACAACAGCTTCATGCCATAAATGCTTC...AGGATAAAGCCCAAATGTTTCATGGAAGTGATCAGCAAAGACACCTGTTACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR TCA 90 bp | TTCATGTGGTCTCTGAATTGCCAGACACTACAAAGAAACCTGATGTCTGTCAACGCACCCCTGAGAGACTaGACACTAATTACAATTCTA | + |
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Preference number: 2 (lower is better) Translates to: FMWSLNCQTLQRNLMSVNAPLRD*TLITIL Trigger: TAGAATTGTAATTAGTGTTCAGTCTCTCAGGGGTGC...GTTGACAGACATCAGGTTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGAGTAAGCTACAGTAGTTaGAATGTGGATGAAATTCAA | + |
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Preference number: 2 (lower is better) Translates to: SPMVGCKHSPLYLSNSGRVSYSS*NVDEIQ Trigger: TTGAATTTCATCCACATTCCAACTACTGTAGCTTAC...TCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGAGATAGACTAAATGTTTaGAGATCTTGTAACAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SPMVGCKHSPLYLSNSGRDRLNV*RSCNRC Trigger: ACACCTGTTACAAGATCTCCAAACATTTAGTCTATC...TCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGTAGTCACTGATAAGTaGATATTAGCTCAAAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: SVQWLAASIHLCICQTLAVVTDK*ILAQKL Trigger: TAGCTTTTGAGCTAATATCCACTTATCAGTGACTAC...TGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR GCA 90 bp | TTCATGTGGTCTCTGAATTGCCAGACACTACAAAGAAACCTGATGTCTGTCAACACAAGGAGTGTGTTCTaGAGGCTCTATTTCATAATT | + |
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Preference number: 2 (lower is better) Translates to: FMWSLNCQTLQRNLMSVNTRSVF*RLYFII Trigger: AATTATGAAATAGAGCCTGCAGAACACACTCCTTGT...GTTGACAGACATCAGGTTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR-3UTR CCA 90 bp | TTCATGTGGTCTCTGAATTGCCAGACACTACAAAGAAACCTGATGTCTGTCAACACAGTAGTTGGAATGTaGATGAAATTCAAGGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: FMWSLNCQTLQRNLMSVNTVVGM*MKFKAR Trigger: TCTTGCCTTGAATTTCATCCACATTCCAACTACTGT...GTTGACAGACATCAGGTTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTGTAACAGGTGTCTTTGCTGATCACTTCCATGAAACATTTGGGCTTTATCCTCAAGTAGTCAATAGCTaGACTAGCATTTTATCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: LVTGVFADHFHETFGLYPQVVNS*TSILSV Trigger: TACTGATAAAATGCTAGTGCAGCTATTGACTACTTG...AGGATAAAGCCCAAATGTTTCATGGAAGTGATCAGCAAAGACACCTGTTACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CAA 90 bp | AATTGCCAGACACTACAAAGAAACCTGATGTCTGTCAACAGAGGATaGGATACAGAAAATGTGATACATTTATACAATGGAGTATTACTC | + |
|
Preference number: 2 (lower is better) Translates to: NCQTLQRNLMSVNRG*DTENVIHLYNGVLL Trigger: GAGTAATACTCCATTGTATAAATGTATCACATTTTCTGTATCCAATCCTCTGTTGACAGACATCAGGTTTCTTTGTAGTGTCTGGCAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CCA 72 bp | ATGCCTGACAAAGCCATCCTCTGCTACATATGCAGCTaGACCCATGGGTCCCTCCATGTTTACTCTGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: MPDKAILCYICS*THGSLHVYSGW Trigger: CCAACCAGAGTAAACATGGAGGGACCCATGGGTCCAGCTGCATATGTAGCAGAGGATGGCTTTGTCAGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | CCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGATCAATCTCTGGATGGGTTGATATTACTCAGTaGGAGGTGCCTCTGGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSTTVSGHGSPGRSISGWVDITQ*EVPLGE Trigger: TTCTCCCAGAGGCACCTCCAACTGAGTAATATCAAC...CCATCCAGAGATTGATCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR TCA 72 bp | GGGGTGGGACATGTTAGGAGTTCAAGGGAAGGTAGGTaGTGTTATGTTGAAGGGAGGAAAGGGAGAGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GVGHVRSSREGR*CYVEGRKGRGE Trigger: TTCCCCTCTCCCTTTCCTCCCTTCAACATAACATCACCTACCTTCCCTTGAACTCCTAACATGTCCCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CCA 72 bp | AAAGGACAGCAAGGGGCAGAGTTGATATTACTCAGTTaGAGGTGCCTCTGGGAGAAAGTAAGGATGGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: KGQQGAELILLS*RCLWEKVRMAT Trigger: CGTGGCCATCCTTACTTTCTCCCAGAGGCACCTCCAACTGAGTAATATCAACTCTGCCCCTTGCTGTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAGTACTTCTTGCCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGAAACTGCTTGGCATTCTaGGGCTCATTGTGTAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CQYFLPSTTVSGHGSPGRNCLAF*GSLCKW Trigger: CCACTTACACAATGAGCCCAAGAATGCCAAGCAGTT...TCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGGCAAGAAGTACTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR GCA 72 bp | TCTCTTCTTCAATTGATGCCTGACAAAGCCATCCTCTaGTACATATGCAGCTGGACCCATGGGTCCCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLLQLMPDKAIL*YICSWTHGSLH Trigger: ATGGAGGGACCCATGGGTCCAGCTGCATATGTAGCAGAGGATGGCTTTGTCAGGCATCAATTGAAGAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CCA 72 bp | TCTGGGCATGGCTCTCCAGGTAGATCAATCTCTGGATaGCCTTTTCTTCAGTCTCTGGCCGAAACTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGHGSPGRSISG*PFLQSLAETLS Trigger: AGACAAAGTTTCGGCCAGAGACTGAAGAAAAGGCCATCCAGAGATTGATCTACCTGGAGAGCCATGCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CCA 72 bp | CACTCCTGCCTCCCAATCTTCACATATCTCCTCTACTaGGGCATCAAACCTTCACAGGACCAATGGTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HSCLPIFTYLLY*GIKPSQDQWSL Trigger: AAGAGACCATTGGTCCTGTGAAGGTTTGATGCCCCAGTAGAGGAGATATGTGAAGATTGGGAGGCAGGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTGCTACATATGCAGCTGGACCCATGGGTCCCTCCATGTTTACTCTGGTTGCATGTGGTCTCTGAATaGCCAGACACTACAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PLLHMQLDPWVPPCLLWLHVVSE*PDTTKK Trigger: TTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATG...CAACCAGAGTAAACATGGAGGGACCCATGGGTCCAGCTGCATATGTAGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CCA 72 bp | CCAAACTGCTTGGCATTCTTGGGCTCATTGTGTAAGTaGAAGTTTGGCATGGCTGGCCTGCTTTTGGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PNCLAFLGSLCK*KFGMAGLLLVF Trigger: AAACACCAAAAGCAGGCCAGCCATGCCAAACTTCCACTTACACAATGAGCCCAAGAATGCCAAGCAGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CCA 72 bp | TGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTaGCAGAGCCTCTCAGGAGATAGCTATATCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WLQAFTSVFVKL*QSLSGDSYIRL Trigger: GAGCCTGATATAGCTATCTCCTGAGAGGCTCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CCA 72 bp | AACCCCTTCAGCTCCTTCAGTGCTCAGTCCAATGGTTaGCTGCAAGCATTCACCTCTGTATTTGTCAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: NPFSSFSAQSNG*LQAFTSVFVKL Trigger: GAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACTGAGCACTGAAGGAGCTGAAGGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CCA 72 bp | GTTGGTGGTTTAGTCCCTGAGAGCTCTAGGGGTGTATaGTTGGTCGATATTGTTGTTCATTCTACGGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: VGGLVPESSRGV*LVDIVVHSTGL Trigger: CAACCCCGTAGAATGAACAACAATATCGACCAACCATACACCCCTAGAGCTCTCAGGGACTAAACCACCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CCA 72 bp | CTCCTCTACTGGGGCATCAAACCTTCACAGGACCAATaGTCTCTTCTTCAATTGATGCCTGACAAAGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LLYWGIKPSQDQ*SLLQLMPDKAI Trigger: GATGGCTTTGTCAGGCATCAATTGAAGAAGAGACCATTGGTCCTGTGAAGGTTTGATGCCCCAGTAGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAGTACTTCTTGCCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGAGGGAAGAGCATTTGTTaGAAACCCCAAGTTGTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CQYFLPSTTVSGHGSPGRGKSIC*KPQVVN Trigger: ATTGACAACTTGGGGTTTCAAACAAATGCTCTTCCC...TCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGGCAAGAAGTACTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTGCTACATATGCAGCTGGACCCATGGGTCCCTCCATGTTTACTCTGGTTGAGATTCTTGAAGGTATaGGCATGTGGATACATACAG | + |
|
Preference number: 3 (lower is better) Translates to: PLLHMQLDPWVPPCLLWLRFLKV*ACGYIQ Trigger: CTGTATGTATCCACATGCCAATACCTTCAAGAATCT...CAACCAGAGTAAACATGGAGGGACCCATGGGTCCAGCTGCATATGTAGCAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCATGTGTAAGTGGAAGTTaGGCATGGCTGGCCTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SVQWLAASIHLCICQTLACVSGS*AWLACF Trigger: AAAGCAGGCCAGCCATGCCAAACTTCCACTTACACA...TGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCATGCTCTTCCTTCTTCTaGAGCTTCATGTGGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SVQWLAASIHLCICQTLACSSFF*SFMWSL Trigger: CAGAGACCACATGAAGCTCAAGAAGAAGGAAGAGCA...TGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR TCA 72 bp | TTCACAGGACCAATGGTCTCTTCTTCAATTGATGCCTaGCAAAGCCATCCTCTGCTACATATGCAGCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FTGPMVSSSIDA*QSHPLLHMQLD Trigger: GTCCAGCTGCATATGTAGCAGAGGATGGCTTTGTCAGGCATCAATTGAAGAAGAGACCATTGGTCCTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | GCATTGACAGCTTGCTCTTCCTTCTTCTTGAGCTTCATGTGGTCTCTGAATTGCTATGGCATGAAGCTGTaGTTGCAAGCTGGGTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ALTACSSFFLSFMWSLNCYGMKL*LQAGSF Trigger: AAAAGACCCAGCTTGCAACAACAGCTTCATGCCATA...GCAATTCAGAGACCACATGAAGCTCAAGAAGAAGGAAGAGCAAGCTGTCAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAGTACTTCTTGCCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGACCAACAAGAATGTACTaGGCAAGATGTATTTATGTG | + |
|
Preference number: 3 (lower is better) Translates to: CQYFLPSTTVSGHGSPGRPTRMY*ARCIYV Trigger: CACATAAATACATCTTGCCAAGTACATTCTTGTTGG...TCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGGCAAGAAGTACTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCATGTGGTCTCTGAATTGCCAGACACTACAAAGAAACCTGATGTCTGTCAACCAGCAAGGGGCAGAGTaGATATTACTCAGTTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FMWSLNCQTLQRNLMSVNQQGAE*ILLSWR Trigger: CCTCCAACTGAGTAATATCAACTCTGCCCCTTGCTG...GTTGACAGACATCAGGTTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR TCA 72 bp | TATGGTTGGTCGATATTGTTGTTCATTCTACGGGGTTaGAAACCCCTTCAGCTCCTTCAGTGCTCAGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: YGWSILLFILRG*KPLQLLQCSVQ Trigger: TTGGACTGAGCACTGAAGGAGCTGAAGGGGTTTTCAACCCCGTAGAATGAACAACAATATCGACCAACCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR GCA 72 bp | ATCCCCCTCATAAAAAGGACTGAAGCATTGACAGCTTaGTCTTCCTTCTTCTTGAGCTTCATGTGGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IPLIKRTEALTA*SSFFLSFMWSL Trigger: CAGAGACCACATGAAGCTCAAGAAGAAGGAAGAGCAAGCTGTCAATGCTTCAGTCCTTTTTATGAGGGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGAATGGTGCTCCAGACTTaGAGAGATTTAACTGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SPMVGCKHSPLYLSNSGRMVLQT*RDLTVQ Trigger: TTGAACAGTTAAATCTCTCAAAGTCTGGAGCACCAT...TCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTAACAGGTGTCTTTGCTGATCACTTCCATGAAACATTTGGGCTTTATCCTGTAGGTGATGTTATGTaGAAGGGAGGAAAGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LVTGVFADHFHETFGLYPVGDVM*KGGKGE Trigger: CTCTCCCTTTCCTCCCTTCAACATAACATCACCTAC...AGGATAAAGCCCAAATGTTTCATGGAAGTGATCAGCAAAGACACCTGTTACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR GCA 72 bp | ACCCTTTATTCTCTCACCCATGCTCCCTTTGAGCCCTaGTTTCTCCTTAGTACACTCTTCTATTTTAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: TLYSLTHAPFEP*FLLSTLFYFKT Trigger: GGTTTTAAAATAGAAGAGTGTACTAAGGAGAAAGCAGGGCTCAAAGGGAGCATGGGTGAGAGAATAAAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCATCAACAAGTGATTATTaGCAACTGTTCTGTGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SVQWLAASIHLCICQTLASTSDY*QLFCVD Trigger: ATCCACACAGAACAGTTGCAAATAATCACTTGTTGA...TGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CCA 72 bp | ACGAATTTTTCAGCTAGTTTCAAAAACACTTGTGTGTaGCTAGAGCAGATGAGGCATTTCCACTGTGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: TNFSASFKNTCV*LEQMRHFHCAS Trigger: AGATGCACAGTGGAAATGCCTCATCTGCTCTAGCCACACACAAGTGTTTTTGAAACTAGCTGAAAAATTCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTCTTGAGCTTCATGTGGTCTCTGAATTGCCAGACACTACAAAGAAACCTTCTGTCAACAGAGGATaGGATACAGAAAATGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: LLLELHVVSELPDTTKKPSVNRG*DTENVI Trigger: TATCACATTTTCTGTATCCAATCCTCTGTTGACAGA...AGGTTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATGAAGCTCAAGAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR TCA 72 bp | GAGAAAAGACATGATGTCTTTCTCAGTCTTAGTTATTaGGAGTTTCCAAATCCATCTCCGTCTAGTTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: EKRHDVFLSLSY*EFPNPSPSSFC Trigger: ACAAAAACTAGACGGAGATGGATTTGGAAACTCTCAATAACTAAGACTGAGAAAGACATCATGTCTTTTCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR TCA 72 bp | ATAGGCAGGAAGGTTGACTTTATATCTTGGTTCTTGTaGATGATCAAGTTTGATGTTTCTACTTTCCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: IGRKVDFISWFL*MIKFDVSTFLL Trigger: TAAGAGGAAAGTAGAAACATCAAACTTGATCATTCACAAGAACCAAGATATAAAGTCAACCTTCCTGCCTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CCA 72 bp | ATATGTATACATACACACCACCAACAAGAATGTACTTaGCAAGATGTATTTATGTGTATTGGTGCATATGCA | + |
|
Preference number: 3 (lower is better) Translates to: ICIHTHHQQECT*QDVFMCIGAYA Trigger: TGCATATGCACCAATACACATAAATACATCTTGCCAAGTACATTCTTGTTGGTGGTGTGTATGTATACATAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| CDS-3UTR CCA 90 bp | TGTCAGTACTTCTTGCCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGAGGTGGGAGGAGCATGTaGAAAAGGCTCGTTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CQYFLPSTTVSGHGSPGRGGRSM*KRLVAF Trigger: GAAAGCAACGAGCCTTTTCCACATGCTCCTCCCACC...TCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGGCAAGAAGTACTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGCATGGCTCTCCAGGTAGATCAATCTCTGGATGGCCTTTTCTTCAGTCTCTGGCCTGAGTTGCTGTaGGTATGGCATACACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGMALQVDQSLDGLFFSLWPELL*VWHTLF Trigger: GAACAGTGTATGCCATACCCACAGCAACTCAGGCCA...GAGACTGAAGAAAAGGCCATCCAGAGATTGATCTACCTGGAGAGCCATGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CAA 72 bp | GAAAGGACAGCAAGGGGCAGAGTTGATATTACTCAGTaGGAGGTGCCTCTGGGAGAAAGTAAGGATGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERTARGRVDITQ*EVPLGESKDGH Trigger: GTGGCCATCCTTACTTTCTCCCAGAGGCACCTCCAACTGAGTAATATCAACTCTGCCCCTTGCTGTCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| CDS-3UTR TCA 90 bp | TGTCAGTACTTCTTGCCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGACAGCTGATGGCATCCTaGAGACAGCAACAACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CQYFLPSTTVSGHGSPGRQLMAS*RQQQQC Trigger: ACATTGTTGTTGCTGTCTTCAGGATGCCATCAGCTG...TCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGGCAAGAAGTACTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| CDS-3UTR CCA 90 bp | CCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGATCAATCTCTGGATGGTTGGATGCACAGAACTaGAGCTGGAAAGTCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSTTVSGHGSPGRSISGWLDAQN*SWKVIV Trigger: CACAATGACTTTCCAGCTCCAGTTCTGTGCATCCAA...CCATCCAGAGATTGATCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CAA 72 bp | AAGTCTTTCCCAAACTGCTTGGCATTCTTGGGCTCATaGTGTAAGTGGAAGTTTGGCATGGCTGGCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSFPNCLAFLGS*CKWKFGMAGLL Trigger: AAGCAGGCCAGCCATGCCAAACTTCCACTTACACAATGAGCCCAAGAATGCCAAGCAGTTTGGGAAAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CAA 72 bp | AGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTaGTCAAACTCTGGCAGAGCCTCTCAGGAGATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPMVGCKHSPLY*SNSGRASQEIA Trigger: AGCTATCTCCTGAGAGGCTCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGCATGGCTCTCCAGGTAGATCAATCTCTGGATGGCCTTTTCTTCAGTCTCGTCATAAGACATGCTTaGCAGGAGAAAACACTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGMALQVDQSLDGLFFSLVIRHA*QEKTLN Trigger: GTTGAGTGTTTTCTCCTGGCAAGCATGTCTTATGAC...GAGACTGAAGAAAAGGCCATCCAGAGATTGATCTACCTGGAGAGCCATGCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| CDS-3UTR GCA 90 bp | TCAGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCACACCCAAGACCCACCTaGAAGCAAGAAACATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVQWLAASIHLCICQTLAHPRPT*KQETCV Trigger: CACACATGTTTCTTGCTTGCAGGTGGGTCTTGGGTG...TGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCTACATATGCAGCTGGACCCATGGGTCCCTCCATGTTTACTCTGGTTGAGGTCACAAAAGAAATaGTCAATCTCATTGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLHMQLDPWVPPCLLWLRSQKK*SISLDA Trigger: TGCATCCAATGAGATTGATCATTTCTTTTGTGACCT...CAACCAGAGTAAACATGGAGGGACCCATGGGTCCAGCTGCATATGTAGCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| 3UTR CAA 72 bp | AAACCCCTTCAGCTCCTTCAGTGCTCAGTCCAATGGTaGGCTGCAAGCATTCACCTCTGTATTTGTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KPLQLLQCSVQW*AASIHLCICQT Trigger: AGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACTGAGCACTGAAGGAGCTGAAGGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| CDS-3UTR GCA 90 bp | AGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGAGCCTGTAAAAGAAATTaGCTCTGGACCAGAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPMVGCKHSPLYLSNSGRACKRN*LWTREK Trigger: CTTCTCTCTGGTCCAGAGGCAATTTCTTTTACAGGC...TCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
||
| CDS-3UTR CCA 90 bp | GCATTGACAGCTTGCTCTTCCTTCTTCTTGAGCTTCATGTGGTCTCTGAATTGCAAATACATGGGAGTTTaGAGGCTGTGGTCACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALTACSSFFLSFMWSLNCKYMGV*RLWSLE Trigger: TTCCAGTGACCACAGCCTCCAAACTCCCATGTATTT...GCAATTCAGAGACCACATGAAGCTCAAGAAGAAGGAAGAGCAAGCTGTCAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| 3UTR CAA 72 bp | CTACTGATTTCCCTGGAAGAAGGGAAGAGCATTTGTTaGAAACCCCAAGTTGTCAATCAAGTTCCTGACCCC | + |
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Preference number: 4 (lower is better) Translates to: LLISLEEGKSIC*KPQVVNQVPDP Trigger: GGGGTCAGGAACTTGATTGACAACTTGGGGTTTCAAACAAATGCTCTTCCCTTCTTCCAGGGAAATCAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS-3UTR GCA 90 bp | CAAGATACAGTGAAGGGCCTTGCTAGGGAGAAGCTAAGGGAAGATAATAGGAAGTTACTCAGGAGTTTCTaGACTGCCTTCTTAACATCC | + |
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Preference number: 4 (lower is better) Translates to: QDTVKGLAREKLREDNRKLLRSF*TAFLTS Trigger: GGATGTTAAGAAGGCAGTGCAGAAACTCCTGAGTAA...CTTCCTATTATCTTCCCTTAGCTTCTCCCTAGCAAGGCCCTTCACTGTATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS-3UTR CCA 90 bp | AGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGAAAAAACTGTAACCCATaGAGGCTTCCAAATCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SPMVGCKHSPLYLSNSGRKNCNP*RLPNPR Trigger: TCTGGGATTTGGAAGCCTCCATGGGTTACAGTTTTT...TCTGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS-3UTR CCA 90 bp | GCATTGACAGCTTGCTCTTCCTTCTTCTTGAGCTTCATGTGGTCTCTGAATTGCAGCAAGAAACATGTGTaGAAGTTCATGAGAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: ALTACSSFFLSFMWSLNCSKKHV*KFMRDG Trigger: CCCATCTCTCATGAACTTCCACACATGTTTCTTGCT...GCAATTCAGAGACCACATGAAGCTCAAGAAGAAGGAAGAGCAAGCTGTCAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS-3UTR CCA 90 bp | TTCATGTGGTCTCTGAATTGCCAGACACTACAAAGAAACCTGATGTCTGTCAACGAGTTGCTGTGGGTATaGCATACACTGTTCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: FMWSLNCQTLQRNLMSVNELLWV*HTLFPK Trigger: CTTTGGGAACAGTGTATGCCATACCCACAGCAACTC...GTTGACAGACATCAGGTTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS-3UTR CCA 90 bp | CTTGTAACAGGTGTCTTTGCTGATCACTTCCATGAAACATTTGGGCTTTATCCTGGAGTTTGGAGGCTGTaGTCACTGGAAGTAACTGTA | + |
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Preference number: 4 (lower is better) Translates to: LVTGVFADHFHETFGLYPGVWRL*SLEVTV Trigger: TACAGTTACTTCCAGTGACCACAGCCTCCAAACTCC...AGGATAAAGCCCAAATGTTTCATGGAAGTGATCAGCAAAGACACCTGTTACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS-3UTR CCA 90 bp | TTCATGTGGTCTCTGAATTGCCAGACACTACAAAGAAACCTGATGTCTGTCAACGCACAGAACTGGAGCTaGAAAGTCATTGTGACAGTA | + |
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Preference number: 4 (lower is better) Translates to: FMWSLNCQTLQRNLMSVNAQNWS*KVIVTV Trigger: TACTGTCACAATGACTTTCCAGCTCCAGTTCTGTGC...GTTGACAGACATCAGGTTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS-3UTR CCA 90 bp | CTTCTTCTTGAGCTTCATGTGGTCTCTGAATTGCCAGACACTACAAAGAAACCTACTCAACTACTGCCATaGAGCCAAAGAAATAAAACT | + |
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Preference number: 4 (lower is better) Translates to: LLLELHVVSELPDTTKKPTQLLP*SQRNKT Trigger: AGTTTTATTTCTTTGGCTCCATGGCAGTAGTTGAGT...AGGTTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATGAAGCTCAAGAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS-3UTR CAA 90 bp | TGTCAGTACTTCTTGCCATCCACAACAGTGTCTGGGCATGGCTCTCCAGGTAGAGGGCCGTGGCCTGAGTaGCTGTGGGTATGGCATACA | + |
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Preference number: 5 (lower is better) Translates to: CQYFLPSTTVSGHGSPGRGPWPE*LWVWHT Trigger: TGTATGCCATACCCACAGCAACTCAGGCCACGGCCC...TCTACCTGGAGAGCCATGCCCAGACACTGTTGTGGATGGCAAGAAGTACTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS-3UTR CAA 90 bp | TTCATGTGGTCTCTGAATTGCCAGACACTACAAAGAAACCTGATGTCTGTCAACGAAATACATGGGAGTTaGGAGGCTGTGGTCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: FMWSLNCQTLQRNLMSVNEIHGS*EAVVTG Trigger: TCCAGTGACCACAGCCTCCAAACTCCCATGTATTTC...GTTGACAGACATCAGGTTTCTTTGTAGTGTCTGGCAATTCAGAGACCACATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS-3UTR CAA 90 bp | TCAGTCCAATGGTTGGCTGCAAGCATTCACCTCTGTATTTGTCAAACTCTGGCAGCCTTCTTAACATCCTaGTTTCTCAAGCTGTACACA | + |
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Preference number: 5 (lower is better) Translates to: SVQWLAASIHLCICQTLAAFLTS*FLKLYT Trigger: TGTGTACAGCTTGAGAAACAAGGATGTTAAGAAGGC...TGCCAGAGTTTGACAAATACAGAGGTGAATGCTTGCAGCCAACCATTGGACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS CCA 90 bp | AAAGAAATAAAACTGAGCCACACAGCCTGTAAAAGAAATTGCCTCTaGACCAGAGAGAAGGGTCTTCAGCATCTTAGGAGCAATGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: KEIKLSHTACKRNCL*TREKGLQHLRSNGS Trigger: ACTTCCATTGCTCCTAAGATGCTGAAGACCCTTCTCTCTGGTCCAGAGGCAATTTCTTTTACAGGCTGTGTGGCTCAGTTTTATTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088876.5 ENSMUST00000215373.3 |
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| CDS-3UTR CAA 90 bp | CTTGTAACAGGTGTCTTTGCTGATCACTTCCATGAAACATTTGGGCTTTATCCTAGAAGGAGAAATTCTTaGATTGCAGTCAGATTACCC | + |
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Preference number: 5 (lower is better) Translates to: LVTGVFADHFHETFGLYPRRRNS*IAVRLP Trigger: GGGTAATCTGACTGCAATCAAAGAATTTCTCCTTCT...AGGATAAAGCCCAAATGTTTCATGGAAGTGATCAGCAAAGACACCTGTTACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215373.3 |
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| CDS CCA 72 bp | CCCACCCAAGACCCACCTGCAAGCAAGAAACATGTGTaGAAGTTCATGAGAGATGGGTACCGAAGTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PTQDPPASKKHV*KFMRDGYRSGL Trigger: CAGCCCACTTCGGTACCCATCTCTCATGAACTTCCACACATGTTTCTTGCTTGCAGGTGGGTCTTGGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088876.5 ENSMUST00000215373.3 |
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| CDS CCA 72 bp | CCTTGTTTAGGGCCGTGGCCTGAGTTGCTGTGGGTATaGCATACACTGTTCCCAAAGTTCCATAGTACAGAG | + |
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Preference number: 6 (lower is better) Translates to: PCLGPWPELLWV*HTLFPKFHSTE Trigger: CTCTGTACTATGGAACTTTGGGAACAGTGTATGCCATACCCACAGCAACTCAGGCCACGGCCCTAAACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088876.5 ENSMUST00000215373.3 |
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| CDS CCA 72 bp | CAGTGTAGAGCAATGAGAAGACCTTGTTTAGGGCCGTaGCCTGAGTTGCTGTGGGTATGGCATACACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: QCRAMRRPCLGP*PELLWVWHTLF Trigger: GAACAGTGTATGCCATACCCACAGCAACTCAGGCCACGGCCCTAAACAAGGTCTTCTCATTGCTCTACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088876.5 ENSMUST00000215373.3 |
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| CDS CAA 90 bp | CAGTGTAGAGCAATGAGAAGACCTTGTTTAGGGCCGTGGCCTGAGTaGCTGTGGGTATGGCATACACTGTTCCCAAAGTTCCATAGTACA | + |
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Preference number: 6 (lower is better) Translates to: QCRAMRRPCLGPWPE*LWVWHTLFPKFHST Trigger: TGTACTATGGAACTTTGGGAACAGTGTATGCCATACCCACAGCAACTCAGGCCACGGCCCTAAACAAGGTCTTCTCATTGCTCTACACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088876.5 ENSMUST00000215373.3 |
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| CDS CCA 72 bp | AAACTGAGCCACACAGCCTGTAAAAGAAATTGCCTCTaGACCAGAGAGAAGGGTCTTCAGCATCTTAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: KLSHTACKRNCL*TREKGLQHLRS Trigger: GCTCCTAAGATGCTGAAGACCCTTCTCTCTGGTCCAGAGGCAATTTCTTTTACAGGCTGTGTGGCTCAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088876.5 ENSMUST00000215373.3 |
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| CDS TCA 72 bp | GGAGCATGTGGAAAAGGCTCGTTGCTTTCCTGCAGCTaGTGGCATCCTGAAGACAGCAACAACAATGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: GACGKGSLLSCS*WHPEDSNNNVY Trigger: ATAAACATTGTTGTTGCTGTCTTCAGGATGCCATCAGCTGCAGGAAAGCAACGAGCCTTTTCCACATGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088876.5 ENSMUST00000215373.3 |
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| CDS GCA 72 bp | GAAATAAAACTGAGCCACACAGCCTGTAAAAGAAATTaGCTCTGGACCAGAGAGAAGGGTCTTCAGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: EIKLSHTACKRN*LWTREKGLQHL Trigger: AAGATGCTGAAGACCCTTCTCTCTGGTCCAGAGGCAATTTCTTTTACAGGCTGTGTGGCTCAGTTTTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088876.5 ENSMUST00000215373.3 |
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| CDS GCA 72 bp | ATAAGACATGCTTGCCAGGAGAAAACACTCAACTACTaGCATGGAGCCAAAGAAATAAAACTGAGCCACACA | + |
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Preference number: 6 (lower is better) Translates to: IRHACQEKTLNY*HGAKEIKLSHT Trigger: TGTGTGGCTCAGTTTTATTTCTTTGGCTCCATGGCAGTAGTTGAGTGTTTTCTCCTGGCAAGCATGTCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088876.5 ENSMUST00000215373.3 |
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