Pregenerated sensors for OLFR1320 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071764Ensembl transcript IDs: ENSMUST00000096449.2, ENSMUST00000214273.2, ENSMUST00000214375.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | TCTTACCTCCTAGACTATGTTCCTGGGGACACTGGGTaGATCAGTTACATTTTATGTATCTCACTATGCATC | + |
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Preference number: 3 (lower is better) Translates to: SYLLDYVPGDTG*ISYILCISLCI Trigger: GATGCATAGTGAGATACATAAAATGTAACTGATGCACCCAGTGTCCCCAGGAACATAGTCTAGGAGGTAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR GCA 90 bp | TTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCAGCCTGGAAGGCAGCTaGCACGGAGAAGCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: LFGVTLIIIYPCLLASLTSLEGS*HGEATK Trigger: CTTTGTGGCTTCTCCGTGGCAGCTGCCTTCCAGGCT...GGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR GCA 90 bp | GAGAGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTGGAAGGCAGCTaGCACGGAGAAGCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: ESLAIVWSYINHNLPLFASLEGS*HGEATK Trigger: CTTTGTGGCTTCTCCGTGGCAGCTGCCTTCCAGGCT...AGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CCA 90 bp | GAGAGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTGATAGCATAGCAGCCTaGAAGGCAGCTGCCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: ESLAIVWSYINHNLPLFADSIAA*KAAATE Trigger: CTCCGTGGCAGCTGCCTTCCAGGCTGCTATGCTATC...AGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CCA 90 bp | AGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCGATAGCATAGCAGCCTaGAAGGCAGCTGCCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: SLAIVWSYINHNLPLFASDSIAA*KAAATE Trigger: CTCCGTGGCAGCTGCCTTCCAGGCTGCTATGCTATC...GCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR TCA 90 bp | GGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCAGAAGAGAGCAGGAGAGCTTCTaGAGAGGTTTCAAGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: GVTLIIIYPCLLASLTRREQESF*RGFKSQ Trigger: CTGTGACTTGAAACCTCTTCAGAAGCTCTCCTGCTC...TCTTCTGGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CCA 90 bp | GAGAGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTACTAGGTTAACCAGGTaGGGATCCGAGCAGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESLAIVWSYINHNLPLFATRLTR*GSEQES Trigger: GCTCTCCTGCTCGGATCCCCACCTGGTTAACCTAGT...AGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR GCA 90 bp | GTTCCTGGGGACACTGGGTGCATCAGTTACATTTTATGTATCTCACTATGCATCGGAGTCCTTGTTGAGTaGATACCAGTACTACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPGDTGCISYILCISLCIGVLVE*IPVLQE Trigger: TTCTTGTAGTACTGGTATGCACTCAACAAGGACTCC...GATGCATAGTGAGATACATAAAATGTAACTGATGCACCCAGTGTCCCCAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR TCA 90 bp | AGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCGAGCAGGAGAGCTTCTaGAGAGGTTTCAAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLAIVWSYINHNLPLFASEQESF*RGFKSQ Trigger: CTGTGACTTGAAACCTCTTCAGAAGCTCTCCTGCTC...GCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR TCA 90 bp | GGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCAGAAGAAGGAGAAAGTTTTGTTaGGAACTGGATACTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVTLIIIYPCLLASLTRRRRKFC*ELDTGQ Trigger: CTGGCCAGTATCCAGTTCTCAACAAAACTTTCTCCT...TCTTCTGGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR GCA 90 bp | TTCCTGGGGACACTGGGTGCATCAGTTACATTTTATGTATCTCACTATGCATCTGGAGTCCTTGTTGAGTaGATACCAGTACTACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLGTLGASVTFYVSHYASGVLVE*IPVLQE Trigger: TTCTTGTAGTACTGGTATGCACTCAACAAGGACTCC...AGATGCATAGTGAGATACATAAAATGTAACTGATGCACCCAGTGTCCCCAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR GCA 90 bp | GGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCAGAAGAGTGGAGAATGCCTTTTaGCTGCCAATAATGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: GVTLIIIYPCLLASLTRRVENAF*LPIMEG Trigger: ACCTTCCATTATTGGCAGGCAAAAGGCATTCTCCAC...TCTTCTGGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR GCA 90 bp | GTTCCTGGGGACACTGGGTGCATCAGTTACATTTTATGTATCTCACTATGCATCAGAACAAGTGGAGAATaGCTTTTGCCTGCCAATAAT | + |
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Preference number: 4 (lower is better) Translates to: VPGDTGCISYILCISLCIRTSGE*LLPANN Trigger: ATTATTGGCAGGCAAAAGGCATTCTCCACTTGTTCT...GATGCATAGTGAGATACATAAAATGTAACTGATGCACCCAGTGTCCCCAGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CCA 90 bp | GTTCCTGGGGACACTGGGTGCATCAGTTACATTTTATGTATCTCACTATGCATCTTATACAACCTAGCATaGAGATCATCCTATGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VPGDTGCISYILCISLCILYNLA*RSSYVP Trigger: GGGAACATAGGATGATCTCCATGCTAGGTTGTATAA...GATGCATAGTGAGATACATAAAATGTAACTGATGCACCCAGTGTCCCCAGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR TCA 90 bp | TTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCCAGGTACCTGTCATATaGCATTACTGCCAGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: LFGVTLIIIYPCLLASLTQVPVI*HYCQEI Trigger: TATCTCCTGGCAGTAATGTCATATGACAGGTACCTG...GGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR GCA 90 bp | TTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCAGTGGTCAACCTCATTaGCTCCACAGAAATTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFGVTLIIIYPCLLASLTSGQPH*LHRNSS Trigger: GCTTGAATTTCTGTGGAGGCAATGAGGTTGACCACT...GGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR GCA 90 bp | TTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCGTGGAGAATGCCTTTTaGCTGCCAATAATGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFGVTLIIIYPCLLASLTVENAF*LPIMEG Trigger: ACCTTCCATTATTGGCAGGCAAAAGGCATTCTCCAC...GGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR TCA 90 bp | GAGAGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTCAGGTACCTGTCATATaGCATTACTGCCAGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: ESLAIVWSYINHNLPLFAQVPVI*HYCQEI Trigger: TATCTCCTGGCAGTAATGTCATATGACAGGTACCTG...AGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR TCA 90 bp | AGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCAGGAGAAAGTTTTGTTaGGAACTGGATACTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLAIVWSYINHNLPLFASRRKFC*ELDTGQ Trigger: CTGGCCAGTATCCAGTTCTCAACAAAACTTTCTCCT...GCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR TCA 90 bp | GGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCAGAAGAGTCACAACTACTAAATaGGAAGAACAAGTGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVTLIIIYPCLLASLTRRVTTTK*EEQVEN Trigger: ATTCTCCACTTGTTCTTCTCATTTAGTAGTTGTGAC...TCTTCTGGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR GCA 90 bp | GGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCAGAAGATATACACAAGACCACTaGAAGAATCTTCCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVTLIIIYPCLLASLTRRYTQDH*KNLPVR Trigger: TCTTACTGGAAGATTCTTGCAGTGGTCTTGTGTATA...TCTTCTGGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR GCA 90 bp | CGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGAGAACAAGTGGAGAATaGCTTTTGCCTGCCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: RLFGVTLIIIYPCLLASLRTSGE*LLPANN Trigger: ATTATTGGCAGGCAAAAGGCATTCTCCACTTGTTCT...CAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR GCA 90 bp | TTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCTATACACAAGACCACTaGAAGAATCTTCCAGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: LFGVTLIIIYPCLLASLTYTQDH*KNLPVR Trigger: TCTTACTGGAAGATTCTTGCAGTGGTCTTGTGTATA...GGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CCA 90 bp | AGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCTTATACAACCTAGCATaGAGATCATCCTATGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SLAIVWSYINHNLPLFASLYNLA*RSSYVP Trigger: GGGAACATAGGATGATCTCCATGCTAGGTTGTATAA...GCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| 3UTR CAA 72 bp | GCGATTGTTTGGAGTTACATTAATCATAATCTACCCTaGTTTGCTAGCCTCACTGACCAGAAGATTAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: AIVWSYINHNLP*FASLTDQKISF Trigger: AAAACTAATCTTCTGGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS CCA 90 bp | ACCTCATTGCCTCCACAGAAATTCAAGCTGGATAGCATAGCAGCCTaGAAGGCAGCTGCCACGGAGAAGCCACAAAGCCATGAGCCAATT | + |
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Preference number: 5 (lower is better) Translates to: TSLPPQKFKLDSIAA*KAAATEKPQSHEPI Trigger: AATTGGCTCATGGCTTTGTGGCTTCTCCGTGGCAGCTGCCTTCCAGGCTGCTATGCTATCCAGCTTGAATTTCTGTGGAGGCAATGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096449.2 ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | GTTCCTGGGGACACTGGGTGCATCAGTTACATTTTATGTATCTCACTATGCATCAGTGGAGAATGCCTTTaGCCTGCCAATAATGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: VPGDTGCISYILCISLCISGECL*PANNGR Trigger: CCTTCCATTATTGGCAGGCAAAAGGCATTCTCCACT...GATGCATAGTGAGATACATAAAATGTAACTGATGCACCCAGTGTCCCCAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS CCA 90 bp | TCCTATGTTCCCGCAGTAAGTCCACCAGCATTCGGGGTACAATATTaGATGTATAACAGACCTCTAGGCATGAAAGGTTTGCAAGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: SYVPAVSPPAFGVQY*MYNRPLGMKGLQER Trigger: TCTTTCTTGCAAACCTTTCATGCCTAGAGGTCTGTTATACATCCAATATTGTACCCCGAATGCTGGTGGACTTACTGCGGGAACATAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096449.2 ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | GTTCCTGGGGACACTGGGTGCATCAGTTACATTTTATGTATCTCACTATGCATCTTCCATGTAATAATGTaGAATAGTGCAGGGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: VPGDTGCISYILCISLCIFHVIM*NSAGAC Trigger: GCAGGCCCCTGCACTATTCAACATTATTACATGGAA...GATGCATAGTGAGATACATAAAATGTAACTGATGCACCCAGTGTCCCCAGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | TTCCTGGGGACACTGGGTGCATCAGTTACATTTTATGTATCTCACTATGCATCTTTCCATGTAATAATGTaGAATAGTGCAGGGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: FLGTLGASVTFYVSHYASFHVIM*NSAGAC Trigger: GCAGGCCCCTGCACTATTCAACATTATTACATGGAA...AGATGCATAGTGAGATACATAAAATGTAACTGATGCACCCAGTGTCCCCAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | TTCCTGGGGACACTGGGTGCATCAGTTACATTTTATGTATCTCACTATGCATCTAAGTGGTCAACCTCATaGCCTCCACAGAAATTCAAG | + |
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Preference number: 5 (lower is better) Translates to: FLGTLGASVTFYVSHYASKWSTS*PPQKFK Trigger: CTTGAATTTCTGTGGAGGCAATGAGGTTGACCACTT...AGATGCATAGTGAGATACATAAAATGTAACTGATGCACCCAGTGTCCCCAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | TTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCAGTGGAGAATGCCTTTaGCCTGCCAATAATGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LFGVTLIIIYPCLLASLTSGECL*PANNGR Trigger: CCTTCCATTATTGGCAGGCAAAAGGCATTCTCCACT...GGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | GTTCCTGGGGACACTGGGTGCATCAGTTACATTTTATGTATCTCACTATGCATCAACAAGGAGAAAGTTTaGTTGAGAACTGGATACTGG | + |
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Preference number: 5 (lower is better) Translates to: VPGDTGCISYILCISLCINKEKV*LRTGYW Trigger: CCAGTATCCAGTTCTCAACAAAACTTTCTCCTTGTT...GATGCATAGTGAGATACATAAAATGTAACTGATGCACCCAGTGTCCCCAGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | GGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCAGAAGAAAGGCATTCAGTTCCTaGAGGTCTCCAAATCCTAAT | + |
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Preference number: 5 (lower is better) Translates to: GVTLIIIYPCLLASLTRRKAFSS*RSPNPN Trigger: ATTAGGATTTGGAGACCTCAAGGAACTGAATGCCTT...TCTTCTGGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | AGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCAAAGCCATGAGCCAATaGCTAGTTCCACACATAGGG | + |
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Preference number: 5 (lower is better) Translates to: SLAIVWSYINHNLPLFASKAMSQ*LVPHIG Trigger: CCCTATGTGTGGAACTAGCAATTGGCTCATGGCTTT...GCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | TTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGACCTTTTTCAGCGCCTCCTaGACATCTCTGTTTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LFGVTLIIIYPCLLASLTFFSAS*TSLFLR Trigger: CCTCAAAAACAGAGATGTCAAGGAGGCGCTGAAAAA...GGTCAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | CGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGAAGGCATTCAGTTCCTaGAGGTCTCCAAATCCTAAT | + |
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Preference number: 5 (lower is better) Translates to: RLFGVTLIIIYPCLLASLKAFSS*RSPNPN Trigger: ATTAGGATTTGGAGACCTCAAGGAACTGAATGCCTT...CAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | GAGAGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAAGTGGTCAACCTCATaGCCTCCACAGAAATTCAAG | + |
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Preference number: 5 (lower is better) Translates to: ESLAIVWSYINHNLPLFAKWSTS*PPQKFK Trigger: CTTGAATTTCTGTGGAGGCAATGAGGTTGACCACTT...AGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | GAGAGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTTTTTTCAGCGCCTCCTaGACATCTCTGTTTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: ESLAIVWSYINHNLPLFAFFSAS*TSLFLR Trigger: CCTCAAAAACAGAGATGTCAAGGAGGCGCTGAAAAA...AGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCTCTC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | AGCTTAGCGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCAAGGAGAAAGTTTTGTaGAGAACTGGATACTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SLAIVWSYINHNLPLFASKEKVL*RTGYWP Trigger: TGGCCAGTATCCAGTTCTCAACAAAACTTTCTCCTT...GCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCGCTAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS-3UTR CAA 90 bp | CGATTGTTTGGAGTTACATTAATCATAATCTACCCTTGTTTGCTAGCCTCACTGAACAAGGAGAAAGTTTaGTTGAGAACTGGATACTGG | + |
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Preference number: 5 (lower is better) Translates to: RLFGVTLIIIYPCLLASLNKEKV*LRTGYW Trigger: CCAGTATCCAGTTCTCAACAAAACTTTCTCCTTGTT...CAGTGAGGCTAGCAAACAAGGGTAGATTATGATTAATGTAACTCCAAACAATCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS CAA 72 bp | CAGCTGCCACGGAGAAGCCACAAAGCCATGAGCCAATaGCTAGTTCCACACATAGGGTTCCATGTAATAATG | + |
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Preference number: 6 (lower is better) Translates to: QLPRRSHKAMSQ*LVPHIGFHVIM Trigger: CATTATTACATGGAACCCTATGTGTGGAACTAGCAATTGGCTCATGGCTTTGTGGCTTCTCCGTGGCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096449.2 ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS CAA 90 bp | CCTGGAAGGCAGCTGCCACGGAGAAGCCACAAAGCCATGAGCCAATaGCTAGTTCCACACATAGGGTTCCATGTAATAATGTTGAATAGT | + |
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Preference number: 6 (lower is better) Translates to: PGRQLPRRSHKAMSQ*LVPHIGFHVIMLNS Trigger: ACTATTCAACATTATTACATGGAACCCTATGTGTGGAACTAGCAATTGGCTCATGGCTTTGTGGCTTCTCCGTGGCAGCTGCCTTCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096449.2 ENSMUST00000214273.2 ENSMUST00000214375.2 |
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| CDS CCA 72 bp | CCCGCAGTAAGTCCACCAGCATTCGGGGTACAATATTaGATGTATAACAGACCTCTAGGCATGAAAGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PAVSPPAFGVQY*MYNRPLGMKGL Trigger: CAAACCTTTCATGCCTAGAGGTCTGTTATACATCCAATATTGTACCCCGAATGCTGGTGGACTTACTGCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096449.2 ENSMUST00000214273.2 ENSMUST00000214375.2 |
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