Pregenerated sensors for OLFR1318 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049758Ensembl transcript IDs: ENSMUST00000058176.7, ENSMUST00000214063.2, ENSMUST00000217533.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTACAGATACCGAACAATTCTCAAGGCTTGAACTGAGGTTGCTGTaGAGTTTAGAAGCGCTACCTCTGTCTCTGAGGACTAGTGTCAAA | + |
|
Preference number: 1 (lower is better) Translates to: CTDTEQFSRLELRLL*SLEALPLSLRTSVK Trigger: TTTGACACTAGTCCTCAGAGACAGAGGTAGCGCTTCTAAACTGCACAGCAACCTCAGTTCAAGCCTTGAGAATTGTTCGGTATCTGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR TCA 90 bp | TGTTTATTTCTGTTGCTGTACAGATACCGAACAATTCTCAAGGCTTaGACTGAGGTTGCTGTGCAGTTTAGAAGCGCTACCTCTGTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: CLFLLLYRYRTILKA*TEVAVQFRSATSVS Trigger: AGAGACAGAGGTAGCGCTTCTAAACTGCACAGCAACCTCAGTTCAAGCCTTGAGAATTGTTCGGTATCTGTACAGCAACAGAAATAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR TCA 90 bp | GATACTGTAGCTGAGGTTCAATGGAGTGATTATACAAGACATCAATaGAAGATACTAATTGAAGCTCTCAGCATTGTCCTTCTGCTGATT | + |
|
Preference number: 1 (lower is better) Translates to: DTVAEVQWSDYTRHQ*KILIEALSIVLLLI Trigger: AATCAGCAGAAGGACAATGCTGAGAGCTTCAATTAGTATCTTTCATTGATGTCTTGTATAATCACTCCATTGAACCTCAGCTACAGTATC 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCATTGTCCTTCTGCTGATTTTCTCATAGTTTCTTGCAAGGAGTGCTGCAGGGAACTGAGGTTGCTGTaGAGTTTAGAAGCGCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: QHCPSADFLIVSCKECCRELRLL*SLEALP Trigger: AGGTAGCGCTTCTAAACTGCACAGCAACCTCAGTTC...CCTGCAGCACTCCTTGCAAGAAACTATGAGAAAATCAGCAGAAGGACAATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR CAA 90 bp | CAGGTAATTTGGGAACCCATGCATGGCAGGTCTGTTTCTTGTCAGTaGTATAACCCAAACATGACAAAACAGTGTATTCAGGTGACACCT | + |
|
Preference number: 2 (lower is better) Translates to: QVIWEPMHGRSVSCQ*YNPNMTKQCIQVTP Trigger: AGGTGTCACCTGAATACACTGTTTTGTCATGTTTGGGTTATACAACTGACAAGAAACAGACCTGCCATGCATGGGTTCCCAAATTACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCATTGTCCTTCTGCTGATTTTCTCATAGTTTCTTGCAAGGAGTGCTGCAGGTGTATACATGCCATATaGCATGTAAACTTCTGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: QHCPSADFLIVSCKECCRCIHAI*HVNFWV Trigger: GACCCAGAAGTTTACATGCCATATGGCATGTATACA...CCTGCAGCACTCCTTGCAAGAAACTATGAGAAAATCAGCAGAAGGACAATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCATTGTCCTTCTGCTGATTTTCTCATAGTTTCTTGCAAGGAGTGCTGCAGGAAATCTAATCAGATCTaGAGAGAATACTTGATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QHCPSADFLIVSCKECCRKSNQI*REYLMR Trigger: CCTCATCAAGTATTCTCTGCAGATCTGATTAGATTT...CCTGCAGCACTCCTTGCAAGAAACTATGAGAAAATCAGCAGAAGGACAATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAACATTTGAGATAACAACACGTGTTCAGTGTGTGAGGTTCCAGAAGTTGCCAGGGTCCATTCAATTTTaGTTGTATATGTTTCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LTFEITTRVQCVRFQKLPGSIQF*LYMFLQ Trigger: CTGAAGAAACATATACAAGCAAAATTGAATGGACCC...TGGCAACTTCTGGAACCTCACACACTGAACACGTGTTGTTATCTCAAATGTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR-3UTR GCA 90 bp | AACCCAAACATGACAAAACAGTGTATTCAGGTGACACCTGGTTTGAATCACCTGAAATCTAATCAGATCTaGAGAGAATACTTGATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: NPNMTKQCIQVTPGLNHLKSNQI*REYLMR Trigger: CCTCATCAAGTATTCTCTGCAGATCTGATTAGATTT...CAGGTGATTCAAACCAGGTGTCACCTGAATACACTGTTTTGTCATGTTTGGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR GCA 72 bp | CTAGGCTGGCCTCGAACTCAGAAATCTACCTGCCTCTaGCGCCCAAGTGCTGGGATTAAAGGCATGTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LGWPRTQKSTCL*RPSAGIKGMCH Trigger: GTGACACATGCCTTTAATCCCAGCACTTGGGCGGCAGAGGCAGGTAGATTTCTGAGTTCGAGGCCAGCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR GCA 72 bp | TGTAGACTAGGCTGGCCTCGAACTCAGAAATCTACCTaGCTCTGCCGCCCAAGTGCTGGGATTAAAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: CRLGWPRTQKST*LCRPSAGIKGM Trigger: CATGCCTTTAATCCCAGCACTTGGGCGGCAGAGGCAGGTAGATTTCTGAGTTCGAGGCCAGCCTAGTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR TCA 72 bp | CTGTTGCTGTACAGATACCGAACAATTCTCAAGGCTTaGACTGAGGTTGCTGTGCAGTTTAGAAGCGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: LLLYRYRTILKA*TEVAVQFRSAT Trigger: GGTAGCGCTTCTAAACTGCACAGCAACCTCAGTTCAAGCCTTGAGAATTGTTCGGTATCTGTACAGCAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATTGTCCTTCTGCTGATTTTCTCATAGTTTCTTGCAAGGAGTGCTGCAGGCAGGTGACACCTGGTTaGAATCACCTGGTAATACAA | + |
|
Preference number: 3 (lower is better) Translates to: QHCPSADFLIVSCKECCRQVTPG*NHLVIQ Trigger: TTGTATTACCAGGTGATTCAAACCAGGTGTCACCTG...CCTGCAGCACTCCTTGCAAGAAACTATGAGAAAATCAGCAGAAGGACAATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR GCA 72 bp | CAGAGGAATGTTGAAGTAGTTGGCTCTAGAAAGGAGTaGCAGCTCATCTATTTCCAAGTTCACAATGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QRNVEVVGSRKE*QLIYFQVHNAL Trigger: CAGAGCATTGTGAACTTGGAAATAGATGAGCTGGCACTCCTTTCTAGAGCCAACTACTTCAACATTCCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATTGTCCTTCTGCTGATTTTCTCATAGTTTCTTGCAAGGAGTGCTGCAGGTCTGTTTCTTGTCAGTaGTATAACCCAAACATGACA | + |
|
Preference number: 3 (lower is better) Translates to: QHCPSADFLIVSCKECCRSVSCQ*YNPNMT Trigger: TGTCATGTTTGGGTTATACAACTGACAAGAAACAGA...CCTGCAGCACTCCTTGCAAGAAACTATGAGAAAATCAGCAGAAGGACAATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCCAAACATGACAAAACAGTGTATTCAGGTGACACCTGGTTTGAATCACCTGATCTGCAGAGAATACTaGATGAGGTACTTCACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: NPNMTKQCIQVTPGLNHLICREY*MRYFTV Trigger: TACTGTGAAGTACCTCATCAAGTATTCTCTGCAGAT...CAGGTGATTCAAACCAGGTGTCACCTGAATACACTGTTTTGTCATGTTTGGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAACATTTGAGATAACAACACGTGTTCAGTGTGTGAGGTTCCAGAAGTTGCCAATCTGCAGAGAATACTaGATGAGGTACTTCACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LTFEITTRVQCVRFQKLPICREY*MRYFTV Trigger: TACTGTGAAGTACCTCATCAAGTATTCTCTGCAGAT...TGGCAACTTCTGGAACCTCACACACTGAACACGTGTTGTTATCTCAAATGTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR CCA 72 bp | CCCAAACATGACAAAACAGTGTATTCAGGTGACACCTaGTTTGAATCACCTGGTAATACAATTAGTGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PKHDKTVYSGDT*FESPGNTISEE Trigger: TTCCTCACTAATTGTATTACCAGGTGATTCAAACCAGGTGTCACCTGAATACACTGTTTTGTCATGTTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR TCA 72 bp | GCTGAGGTTCAATGGAGTGATTATACAAGACATCAATaGAAGATACTAATTGAAGCTCTCAGCATTGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AEVQWSDYTRHQ*KILIEALSIVL Trigger: AAGGACAATGCTGAGAGCTTCAATTAGTATCTTTCATTGATGTCTTGTATAATCACTCCATTGAACCTCAGC 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR GCA 72 bp | GCATTCAAAAGTTCTTTAGCAAAATCTAATCAGATCTaGAGAGAATACTTGATGAGGTACTTCACAGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AFKSSLAKSNQI*REYLMRYFTVA Trigger: AGCTACTGTGAAGTACCTCATCAAGTATTCTCTGCAGATCTGATTAGATTTTGCTAAAGAACTTTTGAATGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR TCA 90 bp | CTAACATTTGAGATAACAACACGTGTTCAGTGTGTGAGGTTCCAGAAGTTGCCAAGGTGGCCATGGAGATaGAACCACTGTTGGCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LTFEITTRVQCVRFQKLPRWPWR*NHCWQR Trigger: TCGCTGCCAACAGTGGTTTCATCTCCATGGCCACCT...TGGCAACTTCTGGAACCTCACACACTGAACACGTGTTGTTATCTCAAATGTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTCCATTCAATTTTGCTTGTATATGTTTCTTCAGAAGAGCATGCAGTACAGAGGTGGCCATGGAGATaGAACCACTGTTGGCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: WVHSILLVYVSSEEHAVQRWPWR*NHCWQR Trigger: TCGCTGCCAACAGTGGTTTCATCTCCATGGCCACCT...CTGTACTGCATGCTCTTCTGAAGAAACATATACAAGCAAAATTGAATGGACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR TCA 90 bp | TTCTGGGTCCATTCAATTTTGCTTGTATATGTTTCTTCAGAAGAGCATGCAGTAAGGTGGCCATGGAGATaGAACCACTGTTGGCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FWVHSILLVYVSSEEHAVRWPWR*NHCWQR Trigger: TCGCTGCCAACAGTGGTTTCATCTCCATGGCCACCT...TACTGCATGCTCTTCTGAAGAAACATATACAAGCAAAATTGAATGGACCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR CAA 72 bp | TGGGAACCCATGCATGGCAGGTCTGTTTCTTGTCAGTaGTATAACCCAAACATGACAAAACAGTGTATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WEPMHGRSVSCQ*YNPNMTKQCIQ Trigger: CTGAATACACTGTTTTGTCATGTTTGGGTTATACAACTGACAAGAAACAGACCTGCCATGCATGGGTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGTCCATTCAATTTTGCTTGTATATGTTTCTTCAGAAGAGCATGCAGTACAGCAGGTTCCCCAGCATaGTTGCCACATAAAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: LGPFNFACICFFRRACSTAGSPA*LPHKIL Trigger: CAGTATTTTATGTGGCAAGCATGCTGGGGAACCTGC...TGTACTGCATGCTCTTCTGAAGAAACATATACAAGCAAAATTGAATGGACCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTCCATTCAATTTTGCTTGTATATGTTTCTTCAGAAGAGCATGCAGTACAGGCAGGTTCCCCAGCATaGTTGCCACATAAAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: WVHSILLVYVSSEEHAVQAGSPA*LPHKIL Trigger: CAGTATTTTATGTGGCAAGCATGCTGGGGAACCTGC...CTGTACTGCATGCTCTTCTGAAGAAACATATACAAGCAAAATTGAATGGACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCATTCAATTTTGCTTGTATATGTTTCTTCAGAAGAGCATGCAGTACAGTAGCAGGTTCCCCAGCATaGTTGCCACATAAAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: GPFNFACICFFRRACSTVAGSPA*LPHKIL Trigger: CAGTATTTTATGTGGCAAGCATGCTGGGGAACCTGC...TACTGTACTGCATGCTCTTCTGAAGAAACATATACAAGCAAAATTGAATGGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| 3UTR CAA 72 bp | AACATGACAAAACAGTGTATTCAGGTGACACCTGGTTaGAATCACCTGGTAATACAATTAGTGAGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NMTKQCIQVTPG*NHLVIQLVRKL Trigger: AAGTTTCCTCACTAATTGTATTACCAGGTGATTCAAACCAGGTGTCACCTGAATACACTGTTTTGTCATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR CAA 90 bp | AACCCAAACATGACAAAACAGTGTATTCAGGTGACACCTGGTTTGAATCACCTGAAAATTCTGATACCATaGAGTGATTTCCTCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: NPNMTKQCIQVTPGLNHLKILIP*SDFLHP Trigger: TGGATGGAGGAAATCACTCAATGGTATCAGAATTTT...CAGGTGATTCAAACCAGGTGTCACCTGAATACACTGTTTTGTCATGTTTGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGTCCATTCAATTTTGCTTGTATATGTTTCTTCAGAAGAGCATGCAGTACTACAACAAAAGCCAATaGGGCCACAGAATGGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGSIQFCLYMFLQKSMQYYNKSQ*GHRMDK Trigger: CTTATCCATTCTGTGGCCCAATTGGCTTTTGTTGTA...GTACTGCATGCTCTTCTGAAGAAACATATACAAGCAAAATTGAATGGACCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGTCCATTCAATTTTGCTTGTATATGTTTCTTCAGAAGAGCATGCAGTACTCTGTACATGCGAGTTaGATGAACCGAGGAAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSIQFCLYMFLQKSMQYSVHAS*MNRGKS Trigger: TGATTTTCCTCGGTTCATCAAACTCGCATGTACAGA...GTACTGCATGCTCTTCTGAAGAAACATATACAAGCAAAATTGAATGGACCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGGGTCCATTCAATTTTGCTTGTATATGTTTCTTCAGAAGAGCATGCAGTATACAACAAAAGCCAATaGGGCCACAGAATGGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: FWVHSILLVYVSSEEHAVYNKSQ*GHRMDK Trigger: CTTATCCATTCTGTGGCCCAATTGGCTTTTGTTGTA...TACTGCATGCTCTTCTGAAGAAACATATACAAGCAAAATTGAATGGACCCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCCATTCAATTTTGCTTGTATATGTTTCTTCAGAAGAGCATGCAGTACAGTAAAATTCTGATACCATaGAGTGATTTCCTCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSIQFCLYMFLQKSMQYSKILIP*SDFLHP Trigger: TGGATGGAGGAAATCACTCAATGGTATCAGAATTTT...ACTGTACTGCATGCTCTTCTGAAGAAACATATACAAGCAAAATTGAATGGACCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR CAA 90 bp | GTCCATTCAATTTTGCTTGTATATGTTTCTTCAGAAGAGCATGCAGTACAGTATTCTGTACATGCGAGTTaGATGAACCGAGGAAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: VHSILLVYVSSEEHAVQYSVHAS*MNRGKS Trigger: TGATTTTCCTCGGTTCATCAAACTCGCATGTACAGA...ATACTGTACTGCATGCTCTTCTGAAGAAACATATACAAGCAAAATTGAATGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCATTCAATTTTGCTTGTATATGTTTCTTCAGAAGAGCATGCAGTACAGTAAAAATTCTGATACCATaGAGTGATTTCCTCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPFNFACICFFRRACSTVKILIP*SDFLHP Trigger: TGGATGGAGGAAATCACTCAATGGTATCAGAATTTT...TACTGTACTGCATGCTCTTCTGAAGAAACATATACAAGCAAAATTGAATGGACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||
| CDS TCA 72 bp | ACAGAAAAAGGAGAATCTGAATTCTCCATGAATTGGTaGGGCCTAGCAACAAAAATTCTGATACCATTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TEKGESEFSMNW*GLATKILIPLS Trigger: ACTCAATGGTATCAGAATTTTTGTTGCTAGGCCTCACCAATTCATGGAGAATTCAGATTCTCCTTTTTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058176.7 ENSMUST00000214063.2 ENSMUST00000217533.2 |
||