Pregenerated sensors for OLFR1316 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000109801Ensembl transcript IDs: ENSMUST00000213696.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGGCCTTGGTCCTCTGAAGGTTCTATGCCCCAGTACCAACGAATaGCTAGGCCAGGAAGTGGGAGTGGGTAGGTTGGGGATCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: RGLGPLKVLCPSTNE*LGQEVGVGRLGIRR Trigger: CCTCCTGATCCCCAACCTACCCACTCCCACTTCCTGGCCTAGGCATTCGTTGGTACTGGGGCATAGAACCTTCAGAGGACCAAGGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR GCA 90 bp | TCAGTCATCAATGGGAGGAGAGGCCTTGGTCCTCTGAAGGTTCTATaGCCCAGTACCAACGAATGCCTAGGCCAGGAAGTGGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: SVINGRRGLGPLKVL*PSTNECLGQEVGVG Trigger: ACCCACTCCCACTTCCTGGCCTAGGCATTCGTTGGTACTGGGGCATAGAACCTTCAGAGGACCAAGGCCTCTCCTCCCATTGATGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR CCA 90 bp | GTAGCAGAGGATGGCCTAGTCAGTCATCAATGGGAGGAGAGGCCTTaGTCCTCTGAAGGTTCTATGCCCCAGTACCAACGAATGCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: VAEDGLVSHQWEERP*SSEGSMPQYQRMPR Trigger: CCTAGGCATTCGTTGGTACTGGGGCATAGAACCTTCAGAGGACCAAGGCCTCTCCTCCCATTGATGACTGACTAGGCCATCCTCTGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR TCA 90 bp | CCCCAGAGTTCCCTGGGACTAAACCACCAATCAAAGAAAACACAATaGGAGACTGCTGCATATGTAGCAGAGGATGGCCTAGTCAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: PQSSLGLNHQSKKTQ*ETAAYVAEDGLVSH Trigger: ATGACTGACTAGGCCATCCTCTGCTACATATGCAGCAGTCTCTCATTGTGTTTTCTTTGATTGGTGGTTTAGTCCCAGGGAACTCTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR TCA 90 bp | GAATGGGCATTAGAGAGTTGCCAGAGAGAAAATGGTGATCTACCCTaGGTCAGGGGGTCAGAGCACTTCCTCAGGTCTTCTTCTTCTATT | + |
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Preference number: 1 (lower is better) Translates to: EWALESCQRENGDLP*VRGSEHFLRSSSSI Trigger: AATAGAAGAAGAAGACCTGAGGAAGTGCTCTGACCCCCTGACTCAGGGTAGATCACCATTTTCTCTCTGGCAACTCTCTAATGCCCATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR GCA 90 bp | CCTGGGACTAAACCACCAATCAAAGAAAACACAATGAGAGACTGCTaGATATGTAGCAGAGGATGGCCTAGTCAGTCATCAATGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: PGTKPPIKENTMRDC*ICSRGWPSQSSMGG Trigger: TCCTCCCATTGATGACTGACTAGGCCATCCTCTGCTACATATGCAGCAGTCTCTCATTGTGTTTTCTTTGATTGGTGGTTTAGTCCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR GCA 90 bp | TTCCCTGGGACTAAACCACCAATCAAAGAAAACACAATGAGAGACTaGTGCATATGTAGCAGAGGATGGCCTAGTCAGTCATCAATGGGA | + |
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Preference number: 1 (lower is better) Translates to: FPGTKPPIKENTMRD*CICSRGWPSQSSMG Trigger: TCCCATTGATGACTGACTAGGCCATCCTCTGCTACATATGCAGCAGTCTCTCATTGTGTTTTCTTTGATTGGTGGTTTAGTCCCAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR TCA 90 bp | TTGCCTTTGGTTACCCTCCAAAGCTACATGGGTAAAGCCTATTGTTaGAGACATCAAATCATTTGGTCACAGAGTATAGATGAATCATTC | + |
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Preference number: 1 (lower is better) Translates to: LPLVTLQSYMGKAYC*RHQIIWSQSIDESF Trigger: GAATGATTCATCTATACTCTGTGACCAAATGATTTGATGTCTTCAACAATAGGCTTTACCCATGTAGCTTTGGAGGGTAACCAAAGGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR TCA 90 bp | GCTGCACTTTCTTTCCATAGTTTTCAGATTGTGCAAGTAATTTGTTaGAATCTGGCAAGAAGACATATAAAAGTCGGCTATACACAAGTA | + |
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Preference number: 1 (lower is better) Translates to: AALSFHSFQIVQVIC*NLARRHIKVGYTQV Trigger: TACTTGTGTATAGCCGACTTTTATATGTCTTCTTGCCAGATTTCAACAAATTACTTGCACAATCTGAAAACTATGGAAAGAAAGTGCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGTGTCAGCACTCCTGGGAGACCAGAGGGTTATGCCACAGTCCTACCTCCTACAATGAGAGACTGCTaGATATGTAGCAGAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: ACVSTPGRPEGYATVLPPTMRDC*ICSRGW Trigger: CCATCCTCTGCTACATATGCAGCAGTCTCTCATTGT...AGGAGGTAGGACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGTGTCAGCACTCCTGGGAGACCAGAGGGTTATGCCACAGTCCTACCTCCTAACACAATGAGAGACTaGTGCATATGTAGCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: ACVSTPGRPEGYATVLPPNTMRD*CICSRG Trigger: TCCTCTGCTACATATGCAGCAGTCTCTCATTGTGTT...AGGAGGTAGGACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTGTCAGCACTCCTGGGAGACCAGAGGGTTATGCCACAGTCCTACCTCCTCCCTCCAAAGCTACATaGGTAAAGCCTATTGTTGAA | + |
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Preference number: 2 (lower is better) Translates to: ACVSTPGRPEGYATVLPPPSKAT*VKPIVE Trigger: TTCAACAATAGGCTTTACCCATGTAGCTTTGGAGGG...AGGAGGTAGGACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGTGTCAGCACTCCTGGGAGACCAGAGGGTTATGCCACAGTCCTACCTCCTCTTTACTTCACTCCATaGTTCTGCTTTCACATTAAC | + |
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Preference number: 2 (lower is better) Translates to: ACVSTPGRPEGYATVLPPLYFTP*FCFHIN Trigger: GTTAATGTGAAAGCAGAAGCATGGAGTGAAGTAAAG...AGGAGGTAGGACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGTGGGTAGGTTGGGGATCAGGAGGAGAGGATAGCAGATTTTCAGGGACGTTCTATTTTTGGAAGTaGTTGTCTCACCCTCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: WEWVGWGSGGEDSRFSGTFYFWK*LSHPPK Trigger: CTTAGGAGGGTGAGACAATCACTTCCAAAAATAGAA...CGTCCCTGAAAATCTGCTATCCTCTCCTCCTGATCCCCAACCTACCCACTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATGGTGATCTACCCTGAGTCAGGGGGTCAGAGCACTTCCTCAGGTCTTCTTGTTACTTGCACATGTTaGACCCAAGAGTCAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: KMVIYPESGGQSTSSGLLVTCTC*TQESAN Trigger: GTTGGCTGACTCTTGGGTTCAACATGTGCAAGTAAC...AAGAAGACCTGAGGAAGTGCTCTGACCCCCTGACTCAGGGTAGATCACCATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAGGGAAGGTGCACAGAGGGCTAAAAACAGCCCATAGTAACAGGGCTGTCCAATATCCACAACACTaGCAAGGCTCAAAGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: LAGKVHRGLKTAHSNRAVQYPQH*QGSKKI Trigger: AATCTTCTTTGAGCCTTGGCAGTGTTGTGGATATTG...GACAGCCCTGTTACTATGGGCTGTTTTTAGCCCTCTGTGCACCTTCCCTGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTGTAAGCCTGTGTCAGCACTCCTGGGAGACCAGAGGGTTATGCCACAGTGTGCAAGTAATTTGTTaGAATCTGGCAAGAAGACAT | + |
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Preference number: 2 (lower is better) Translates to: ESVSLCQHSWETRGLCHSVQVIC*NLARRH Trigger: ATGTCTTCTTGCCAGATTTCAACAAATTACTTGCAC...ACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGCTTACAGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR GCA 90 bp | AAAATGGTGATCTACCCTGAGTCAGGGGGTCAGAGCACTTCCTCAGGTCTTCTTAATAGATGGGAAGGATaGTTGTCAGGCCTCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: KMVIYPESGGQSTSSGLLNRWEG*LSGLIP Trigger: AGGAATGAGGCCTGACAAGCATCCTTCCCATCTATT...AAGAAGACCTGAGGAAGTGCTCTGACCCCCTGACTCAGGGTAGATCACCATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR CCA 90 bp | AAAATGGTGATCTACCCTGAGTCAGGGGGTCAGAGCACTTCCTCAGGTCTTCTTTTACTGAGAAGGCATTaGCAGTTGATAGCTCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: KMVIYPESGGQSTSSGLLLLRRH*QLIAPR Trigger: CCTAGGAGCTATCAACTGCCAATGCCTTCTCAGTAA...AAGAAGACCTGAGGAAGTGCTCTGACCCCCTGACTCAGGGTAGATCACCATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATGGTGATCTACCCTGAGTCAGGGGGTCAGAGCACTTCCTCAGGTCTTCTTAGAGAGAGAGAGAGATaGAGTTGGGAATTAATCCTG | + |
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Preference number: 2 (lower is better) Translates to: KMVIYPESGGQSTSSGLLRERER*SWELIL Trigger: CAGGATTAATTCCCAACTTCATCTCTCTCTCTCTCT...AAGAAGACCTGAGGAAGTGCTCTGACCCCCTGACTCAGGGTAGATCACCATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR CCA 90 bp | TATAGTACAGCTTGCTACTTTACTTCACTCCATGCTTCTGCTTTCACATTAACTGCCAGGAAGTGGGAGTaGGTAGGTTGGGGATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: YSTACYFTSLHASAFTLTARKWE*VGWGSG Trigger: TCCTGATCCCCAACCTACCCACTCCCACTTCCTGGC...AGTTAATGTGAAAGCAGAAGCATGGAGTGAAGTAAAGTAGCAAGCTGTACTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGATCAGTCCTAAATGGAGCATCATTATCAATATCCACAACACTGCCAAGGTGGGAGGAGAGGCCTTaGTCCTCTGAAGGTTCTATG | + |
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Preference number: 2 (lower is better) Translates to: KRSVLNGASLSISTTLPRWEERP*SSEGSM Trigger: CATAGAACCTTCAGAGGACCAAGGCCTCTCCTCCCA...CCTTGGCAGTGTTGTGGATATTGATAATGATGCTCCATTTAGGACTGATCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR CCA 90 bp | TATAGTACAGCTTGCTACTTTACTTCACTCCATGCTTCTGCTTTCACATTAACTTGGGAGTGGGTAGGTTaGGGATCAGGAGGAGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: YSTACYFTSLHASAFTLTWEWVG*GSGGED Trigger: ATCCTCTCCTCCTGATCCCCAACCTACCCACTCCCA...AGTTAATGTGAAAGCAGAAGCATGGAGTGAAGTAAAGTAGCAAGCTGTACTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGATCAGTCCTAAATGGAGCATCATTATCAATATCCACAACACTGCCAAGGAACTTCAAAAATAGATaGGAAGGATGCTTGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: KRSVLNGASLSISTTLPRNFKNR*EGCLSG Trigger: GCCTGACAAGCATCCTTCCCATCTATTTTTGAAGTT...CCTTGGCAGTGTTGTGGATATTGATAATGATGCTCCATTTAGGACTGATCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAGATCAGTCCTAAATGGAGCATCATTATCAATATCCACAACACTGCCAAGGTCAAAGAAAACACAATaGGAGACTGCTGCATATGTA | + |
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Preference number: 2 (lower is better) Translates to: KRSVLNGASLSISTTLPRSKKTQ*ETAAYV Trigger: TACATATGCAGCAGTCTCTCATTGTGTTTTCTTTGA...CCTTGGCAGTGTTGTGGATATTGATAATGATGCTCCATTTAGGACTGATCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR TCA 72 bp | GCGATCTCACCTGAGTCCCAGGGTCAGACACTTTCTTaGGGCAAGCTCTCCTCTGGCAGGGAAGGTGCACAG | + |
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Preference number: 3 (lower is better) Translates to: AISPESQGQTLS*GKLSSGREGAQ Trigger: CTGTGCACCTTCCCTGCCAGAGGAGAGCTTGCCTCAAGAAAGTGTCTGACCCTGGGACTCAGGTGAGATCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR GCA 72 bp | GGTCCTCTGAAGGTTCTATGCCCCAGTACCAACGAATaGCTAGGCCAGGAAGTGGGAGTGGGTAGGTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: GPLKVLCPSTNE*LGQEVGVGRLG Trigger: CCCCAACCTACCCACTCCCACTTCCTGGCCTAGGCATTCGTTGGTACTGGGGCATAGAACCTTCAGAGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTGTGTCAGCACTCCTGGGAGACCAGAGGGTTATGCCACAGTCCTACCTCCTCACAGGCTAATGACATaGCCTTTGGTTACCCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: ACVSTPGRPEGYATVLPPHRLMT*PLVTLQ Trigger: TTGGAGGGTAACCAAAGGCAATGTCATTAGCCTGTG...AGGAGGTAGGACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR CCA 72 bp | GATGGCCTAGTCAGTCATCAATGGGAGGAGAGGCCTTaGTCCTCTGAAGGTTCTATGCCCCAGTACCAACGA | + |
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Preference number: 3 (lower is better) Translates to: DGLVSHQWEERP*SSEGSMPQYQR Trigger: TCGTTGGTACTGGGGCATAGAACCTTCAGAGGACCAAGGCCTCTCCTCCCATTGATGACTGACTAGGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR CCA 72 bp | TCCAATTGTGAGTCTGTAAGCCTGTGTCAGCACTCCTaGGAGACCAGAGGGTTATGCCACAGTCCTACCTCC | + |
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Preference number: 3 (lower is better) Translates to: SNCESVSLCQHS*ETRGLCHSPTS Trigger: GGAGGTAGGACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGCTTACAGACTCACAATTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGGACCCTGTCCAGCTGCTCTGTCTCTTCTGCGGCCTGTGCACTACTGGGTGTGTGCAAGTAATTTGTaGAAATCTGGCAAGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: VGPCPAALSLLRPVHYWVCASNL*KSGKKT Trigger: TGTCTTCTTGCCAGATTTCAACAAATTACTTGCACA...CACCCAGTAGTGCACAGGCCGCAGAAGAGACAGAGCAGCTGGACAGGGTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGGACCCTGTCCAGCTGCTCTGTCTCTTCTGCGGCCTGTGCACTACTGGGTGGATTGTGCAAGTAATTaGTTGAAATCTGGCAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: VGPCPAALSLLRPVHYWVDCASN*LKSGKK Trigger: CTTCTTGCCAGATTTCAACAAATTACTTGCACAATC...CACCCAGTAGTGCACAGGCCGCAGAAGAGACAGAGCAGCTGGACAGGGTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR TCA 72 bp | CTGGAGTGCGGCTTCTGTAGCATGTGCAATCCTGAGTaGATGGGCATTAGAGAGTTGCCAGAGAGAAAATGG | + |
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Preference number: 3 (lower is better) Translates to: LECGFCSMCNPE*MGIRELPERKW Trigger: CCATTTTCTCTCTGGCAACTCTCTAATGCCCATTCACTCAGGATTGCACATGCTACAGAAGCCGCACTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR CCA 72 bp | AGTGCGGCTTCTGTAGCATGTGCAATCCTGAGTGAATaGGCATTAGAGAGTTGCCAGAGAGAAAATGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: SAASVACAILSE*ALESCQRENGD Trigger: ATCACCATTTTCTCTCTGGCAACTCTCTAATGCCCATTCACTCAGGATTGCACATGCTACAGAAGCCGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR TCA 72 bp | TCCCTGGGACTAAACCACCAATCAAAGAAAACACAATaGGAGACTGCTGCATATGTAGCAGAGGATGGCCTA | + |
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Preference number: 3 (lower is better) Translates to: SLGLNHQSKKTQ*ETAAYVAEDGL Trigger: TAGGCCATCCTCTGCTACATATGCAGCAGTCTCTCATTGTGTTTTCTTTGATTGGTGGTTTAGTCCCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR CCA 72 bp | ATGCTTGTCAGGCCTCATTCCTTACTGAGAAGGCATTaGCAGTTGATAGCTCCTAGGGAAAGTAGAATTTTC | + |
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Preference number: 3 (lower is better) Translates to: MLVRPHSLLRRH*QLIAPRESRIF Trigger: GAAAATTCTACTTTCCCTAGGAGCTATCAACTGCCAATGCCTTCTCAGTAAGGAATGAGGCCTGACAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR GCA 72 bp | AAACCACCAATCAAAGAAAACACAATGAGAGACTGCTaGATATGTAGCAGAGGATGGCCTAGTCAGTCATCA | + |
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Preference number: 3 (lower is better) Translates to: KPPIKENTMRDC*ICSRGWPSQSS Trigger: TGATGACTGACTAGGCCATCCTCTGCTACATATGCAGCAGTCTCTCATTGTGTTTTCTTTGATTGGTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR GCA 72 bp | ACTAAACCACCAATCAAAGAAAACACAATGAGAGACTaGTGCATATGTAGCAGAGGATGGCCTAGTCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: TKPPIKENTMRD*CICSRGWPSQS Trigger: TGACTGACTAGGCCATCCTCTGCTACATATGCAGCAGTCTCTCATTGTGTTTTCTTTGATTGGTGGTTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTATAGTACAGCTTGCTACTTTACTTCACTCCATGCTTCTGCTTTCACATTAAGTTACTTGCACATGTaGAACCCAAGAGTCAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: CYSTACYFTSLHASAFTLSYLHM*NPRVSQ Trigger: TTGGCTGACTCTTGGGTTCAACATGTGCAAGTAACT...TAATGTGAAAGCAGAAGCATGGAGTGAAGTAAAGTAGCAAGCTGTACTATAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR TCA 72 bp | ATCAAACAGTGGTATCATGTTGGCACAATTGTTATGTaGGTAACTAAGGGATCTGTGATGAAGTTGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: IKQWYHVGTIVM*VTKGSVMKLRQ Trigger: CTGCCTCAACTTCATCACAGATCCCTTAGTTACTCACATAACAATTGTGCCAACATGATACCACTGTTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR TCA 72 bp | GTTACCCTCCAAAGCTACATGGGTAAAGCCTATTGTTaGAGACATCAAATCATTTGGTCACAGAGTATAGAT | + |
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Preference number: 3 (lower is better) Translates to: VTLQSYMGKAYC*RHQIIWSQSID Trigger: ATCTATACTCTGTGACCAAATGATTTGATGTCTTCAACAATAGGCTTTACCCATGTAGCTTTGGAGGGTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR TCA 72 bp | TGTCATAATCATGAACGTCTAGTTACTTGCACATGTTaGACCCAAGAGTCAGCCAACCAAACTTCAAAAATA | + |
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Preference number: 3 (lower is better) Translates to: CHNHERLVTCTC*TQESANQTSKI Trigger: TATTTTTGAAGTTTGGTTGGCTGACTCTTGGGTTCAACATGTGCAAGTAACTAGACGTTCATGATTATGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| 3UTR CCA 72 bp | CATGTCCCCTATCTTTCTATATTGAAAAACATCCTATaGTATAGACTCTTCTATACCTTACTTATGCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: HVPYLSILKNIL*YRLFYTLLMLH Trigger: GTGAAGCATAAGTAAGGTATAGAAGAGTCTATACCATAGGATGTTTTTCAATATAGAAAGATAGGGGACATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR TCA 90 bp | GTAGGACCCTGTCCAGCTGCTCTGTCTCTTCTGCGGCCTGTGCACTACTGGGTGCAAAAGCCATGGCGATaGGTAAAACCATCTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: VGPCPAALSLLRPVHYWVQKPWR*VKPSPH Trigger: GTGTGGAGATGGTTTTACTCATCGCCATGGCTTTTG...CACCCAGTAGTGCACAGGCCGCAGAAGAGACAGAGCAGCTGGACAGGGTCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR GCA 90 bp | GTAGGACCCTGTCCAGCTGCTCTGTCTCTTCTGCGGCCTGTGCACTACTGGGTGGTTTCCCATCATGCTTaGCACATAAAACACAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VGPCPAALSLLRPVHYWVVSHHA*HIKHRG Trigger: TCCTCTGTGTTTTATGTGGCAAGCATGATGGGAAAC...CACCCAGTAGTGCACAGGCCGCAGAAGAGACAGAGCAGCTGGACAGGGTCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR TCA 90 bp | GAGTCTGTAAGCCTGTGTCAGCACTCCTGGGAGACCAGAGGGTTATGCCACAGTATGACAAAAACCAGCTaGGCCAGAGAGTGTATAAGG | + |
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Preference number: 4 (lower is better) Translates to: ESVSLCQHSWETRGLCHSMTKTS*ARECIR Trigger: CCTTATACACTCTCTGGCTCAGCTGGTTTTTGTCAT...ACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGCTTACAGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR TCA 90 bp | CTGGCAGGGAAGGTGCACAGAGGGCTAAAAACAGCCCATAGTAACAGGGCTGTCAACTCAGTAGCTGTTTaGACACTCTCTTCATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LAGKVHRGLKTAHSNRAVNSVAV*TLSSLP Trigger: TGGCAATGAAGAGAGTGTTCAAACAGCTACTGAGTT...GACAGCCCTGTTACTATGGGCTGTTTTTAGCCCTCTGTGCACCTTCCCTGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR TCA 90 bp | GAGTCTGTAAGCCTGTGTCAGCACTCCTGGGAGACCAGAGGGTTATGCCACAGTATAAATCATCTTGGGTaGGGTAACAGAAGAAACACC | + |
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Preference number: 4 (lower is better) Translates to: ESVSLCQHSWETRGLCHSINHLG*GNRRNT Trigger: GGTGTTTCTTCTGTTACCTCACCCAAGATGATTTAT...ACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGCTTACAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR TCA 90 bp | GAGTCTGTAAGCCTGTGTCAGCACTCCTGGGAGACCAGAGGGTTATGCCACAGTATGAAACTATCAATATaGAGAAGGAGCCCACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: ESVSLCQHSWETRGLCHSMKLSI*RRSPQR Trigger: TCTCTGTGGGCTCCTTCTTCATATTGATAGTTTCAT...ACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGCTTACAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR TCA 90 bp | GAGTCTGTAAGCCTGTGTCAGCACTCCTGGGAGACCAGAGGGTTATGCCACAGTTTTAGAGAAACCACCTaGAGAGTGCTTTTGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: ESVSLCQHSWETRGLCHSFRETT*RVLLYR Trigger: TCTGTACAAAAGCACTCTTCAGGTGGTTTCTCTAAA...ACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGCTTACAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR TCA 90 bp | GAGTCTGTAAGCCTGTGTCAGCACTCCTGGGAGACCAGAGGGTTATGCCACAGTAAAAAGGTAAGTTTATaGCAAAAACCAGCTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ESVSLCQHSWETRGLCHSKKVSL*QKPAEP Trigger: TGGCTCAGCTGGTTTTTGTCATAAACTTACCTTTTT...ACTGTGGCATAACCCTCTGGTCTCCCAGGAGTGCTGACACAGGCTTACAGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR TCA 90 bp | TGCAATGGAATACTGCCTTCTGAACTTTGTAAAACTGTCATAATCATGAACGTCATTGGAGTGTGTAAGTaGGGGTCTGAAGCCACAGTA | + |
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Preference number: 4 (lower is better) Translates to: CNGILPSELCKTVIIMNVIGVCK*GSEATV Trigger: TACTGTGGCTTCAGACCCTCACTTACACACTCCAAT...GACGTTCATGATTATGACAGTTTTACAAAGTTCAGAAGGCAGTATTCCATTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR CCA 90 bp | TGCAATGGAATACTGCCTTCTGAACTTTGTAAAACTGTCATAATCATGAACGTCACAAAGAGAAGAAGCTaGATGTCCCAGGAGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: CNGILPSELCKTVIIMNVTKRRS*MSQELV Trigger: CACCAACTCCTGGGACATCCAGCTTCTTCTCTTTGT...GACGTTCATGATTATGACAGTTTTACAAAGTTCAGAAGGCAGTATTCCATTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR TCA 90 bp | AAGAGATCAGTCCTAAATGGAGCATCATTATCAATATCCACAACACTGCCAAGGAAGAAATACAAACTCTaGTACCACAGAGAGGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: KRSVLNGASLSISTTLPRKKYKL*YHREVC Trigger: GCAAACCTCTCTGTGGTATCAGAGTTTGTATTTCTT...CCTTGGCAGTGTTGTGGATATTGATAATGATGCTCCATTTAGGACTGATCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR TCA 90 bp | TGCAATGGAATACTGCCTTCTGAACTTTGTAAAACTGTCATAATCATGAACGTCTGTCCCAGGAGTTGGTaGGTCCAAGAAATACAAACT | + |
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Preference number: 4 (lower is better) Translates to: CNGILPSELCKTVIIMNVCPRSW*VQEIQT Trigger: AGTTTGTATTTCTTGGACTCACCAACTCCTGGGACA...GACGTTCATGATTATGACAGTTTTACAAAGTTCAGAAGGCAGTATTCCATTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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| CDS-3UTR CAA 90 bp | TGCTATAGTACAGCTTGCTACTTTACTTCACTCCATGCTTCTGCTTTCACATTAAGTTTCCCATCATGCTaGCCACATAAAACACAGAGG | + |
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Preference number: 5 (lower is better) Translates to: CYSTACYFTSLHASAFTLSFPSC*PHKTQR Trigger: CCTCTGTGTTTTATGTGGCAAGCATGATGGGAAACT...TAATGTGAAAGCAGAAGCATGGAGTGAAGTAAAGTAGCAAGCTGTACTATAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213696.2 |
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