Pregenerated sensors for OLFR1313 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074946Ensembl transcript IDs: ENSMUST00000099599.5, ENSMUST00000213577.2, ENSMUST00000216071.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAACTTTAATCGCAGCACTTGGGAGGCAAAGACAGGTGGATTTCTaGGTTCCAGGCCAGCCTGGTCTGCAGAGTGAGTTCCTGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: STLIAALGRQRQVDF*VPGQPGLQSEFLDS Trigger: GCTGTCCAGGAACTCACTCTGCAGACCAGGCTGGCCTGGAACTCAGAAATCCACCTGTCTTTGCCTCCCAAGTGCTGCGATTAAAGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR GCA 90 bp | GACTGGGGAAGGACATCAGAGGAACTACAAGGGCCAGAGGGAAATATGAAAATGCAGGCCAGCCTGGTCTaGAGAGTGAGTTCCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: DWGRTSEELQGPEGNMKMQASLV*RVSSWT Trigger: TGTCCAGGAACTCACTCTGCAGACCAGGCTGGCCTG...CATTTTCATATTTCCCTCTGGCCCTTGTAGTTCCTCTGATGTCCTTCCCCAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGGCAAAGACAGGTGGATTTCTGAGTTCCAGGCCAGCCTGGTCTGCAGAGGTGTGTGTGTGTGTGTaGAAACACAGGATTTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: WEAKTGGFLSSRPAWSAEVCVCV*KHRISS Trigger: TGAAGAAATCCTGTGTTTGCACACACACACACACAC...CTCTGCAGACCAGGCTGGCCTGGAACTCAGAAATCCACCTGTCTTTGCCTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGGGGAAGGACATCAGAGGAACTACAAGGGCCAGAGGGAAATATGAAAATGTGCAGAGTGAGTTCCTaGACAGCCAGGGCAACACAG | + |
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Preference number: 2 (lower is better) Translates to: DWGRTSEELQGPEGNMKMCRVSS*TARATQ Trigger: CTGTGTTGCCCTGGCTGTCCAGGAACTCACTCTGCA...CATTTTCATATTTCCCTCTGGCCCTTGTAGTTCCTCTGATGTCCTTCCCCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR TCA 90 bp | TGGATTCTTGGAGAGTATGAATCCGTTTTCACAAGGAATGACATCCCTAATAAGGCCTGGTCTGCAGAGTaGGTTCCTGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: WILGEYESVFTRNDIPNKAWSAE*VPGQPG Trigger: CCCTGGCTGTCCAGGAACTCACTCTGCAGACCAGGC...CTTATTAGGGATGTCATTCCTTGTGAAAACGGATTCATACTCTCCAAGAATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCAATGTAAGAACACACAGAAGGGTAAAAGTCAACGACTGCAGCCACATGTCGGAGGCAAAGACAGGTaGATTTCTGAGTTCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: CQCKNTQKGKSQRLQPHVGGKDR*ISEFQA Trigger: GGCCTGGAACTCAGAAATCCACCTGTCTTTGCCTCC...GACATGTGGCTGCAGTCGTTGACTTTTACCCTTCTGTGTGTTCTTACATTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGCTTCAAAAGAGAAGAGCAACAAATTGTGTTACCCAGCTCTAAAGTCTATGCCTGGTCTGCAGAGTaGGTTCCTGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SSFKREEQQIVLPSSKVYAWSAE*VPGQPG Trigger: CCCTGGCTGTCCAGGAACTCACTCTGCAGACCAGGC...ATAGACTTTAGAGCTGGGTAACACAATTTGTTGCTCTTCTCTTTTGAAGCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCAACATGAGGAAATCCATAGCTGGTACTGTAAACCTAGAAAACTATCCATACAGGCCAGCCTGGTCTaGAGAGTGAGTTCCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: TQHEEIHSWYCKPRKLSIQASLV*RVSSWT Trigger: TGTCCAGGAACTCACTCTGCAGACCAGGCTGGCCTG...TATGGATAGTTTTCTAGGTTTACAGTACCAGCTATGGATTTCCTCATGTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCTTCAAAAGAGAAGAGCAACAAATTGTGTTACCCAGCTCTAAAGTCTATTGCAGAGTGAGTTCCTaGACAGCCAGGGCAACACAG | + |
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Preference number: 2 (lower is better) Translates to: SSFKREEQQIVLPSSKVYCRVSS*TARATQ Trigger: CTGTGTTGCCCTGGCTGTCCAGGAACTCACTCTGCA...ATAGACTTTAGAGCTGGGTAACACAATTTGTTGCTCTTCTCTTTTGAAGCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CCA 90 bp | AACTGGACTCAACATGAGGAAATCCATAGCTGGTACTGTAAACCTAGAAAACTAGGAGGCAAAGACAGGTaGATTTCTGAGTTCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: NWTQHEEIHSWYCKPRKLGGKDR*ISEFQA Trigger: GGCCTGGAACTCAGAAATCCACCTGTCTTTGCCTCC...TAGTTTTCTAGGTTTACAGTACCAGCTATGGATTTCCTCATGTTGAGTCCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR CAA 90 bp | ATATGTGTGCACACAGAAGTAATAATTGAAGAAGCAGTCATGAATTaGAGAGAGACTGGGGAAGGACATCAGAGGAACTACAAGGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ICVHTEVIIEEAVMN*RETGEGHQRNYKGQ Trigger: CTGGCCCTTGTAGTTCCTCTGATGTCCTTCCCCAGTCTCTCTCAAATTCATGACTGCTTCTTCAATTATTACTTCTGTGTGCACACATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCAATGTAAGAACACACAGAAGGGTAAAAGTCAACGACTGCAGCCACATGTCACACATGTGCATATTTaGAATATTAAGTGGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: CQCKNTQKGKSQRLQPHVTHVHI*NIKWTQ Trigger: CTGAGTCCACTTAATATTGCAAATATGCACATGTGT...GACATGTGGCTGCAGTCGTTGACTTTTACCCTTCTGTGTGTTCTTACATTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR GCA 90 bp | TGGATTCTTGGAGAGTATGAATCCGTTTTCACAAGGAATGACATCCCTAATAAGGTGTGTGTGTGTGTGTaGAAACACAGGATTTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: WILGEYESVFTRNDIPNKVCVCV*KHRISS Trigger: TGAAGAAATCCTGTGTTTGCACACACACACACACAC...CTTATTAGGGATGTCATTCCTTGTGAAAACGGATTCATACTCTCCAAGAATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTATTCAAGCTTCAAAAGAGAAGAGCAACAAATTGTGTTACCCAGCTCTATTGTTGGCTTCTTCTTaGTCTTCCACACATAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: GAIQASKEKSNKLCYPALLLASS*SSTHSS Trigger: TGAACTATGTGTGGAAGAGCAAGAAGAAGCCAACAA...TAGAGCTGGGTAACACAATTTGTTGCTCTTCTCTTTTGAAGCTTGAATAGCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTATTCAAGCTTCAAAAGAGAAGAGCAACAAATTGTGTTACCCAGCTCTAGAGGAAATCCATAGCTaGTACTGTAAACCTAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GAIQASKEKSNKLCYPALEEIHS*YCKPRK Trigger: TTTTCTAGGTTTACAGTACCAGCTATGGATTTCCTC...TAGAGCTGGGTAACACAATTTGTTGCTCTTCTCTTTTGAAGCTTGAATAGCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCTTCAAAAGAGAAGAGCAACAAATTGTGTTACCCAGCTCTAAAGTCTATTTGTCCAATCCCATGTaGTTAGGCATAAACACATGT | + |
|
Preference number: 2 (lower is better) Translates to: SSFKREEQQIVLPSSKVYLSNPM*LGINTC Trigger: ACATGTGTTTATGCCTAACCACATGGGATTGGACAA...ATAGACTTTAGAGCTGGGTAACACAATTTGTTGCTCTTCTCTTTTGAAGCTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCAACATGAGGAAATCCATAGCTGGTACTGTAAACCTAGAAAACTATCCATAACACATGTGCATATTTaGAATATTAAGTGGACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TQHEEIHSWYCKPRKLSITHVHI*NIKWTQ Trigger: CTGAGTCCACTTAATATTGCAAATATGCACATGTGT...TATGGATAGTTTTCTAGGTTTACAGTACCAGCTATGGATTTCCTCATGTTGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR TCA 72 bp | ATCGCAGCACTTGGGAGGCAAAGACAGGTGGATTTCTaGGTTCCAGGCCAGCCTGGTCTGCAGAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: IAALGRQRQVDF*VPGQPGLQSEF Trigger: GAACTCACTCTGCAGACCAGGCTGGCCTGGAACTCAGAAATCCACCTGTCTTTGCCTCCCAAGTGCTGCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCAATGTAAGAACACACAGAAGGGTAAAAGTCAACGACTGCAGCCACATGTCGAAGTCAATGGATTCTaGGAGAGTATGAATCCGTTT | + |
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Preference number: 3 (lower is better) Translates to: CQCKNTQKGKSQRLQPHVEVNGF*ESMNPF Trigger: AAACGGATTCATACTCTCCAAGAATCCATTGACTTC...GACATGTGGCTGCAGTCGTTGACTTTTACCCTTCTGTGTGTTCTTACATTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCAATGTAAGAACACACAGAAGGGTAAAAGTCAACGACTGCAGCCACATGTCAAATGTCAGTACATTTaGTTGGCTTCTTCTTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CQCKNTQKGKSQRLQPHVKCQYI*LASSCS Trigger: AGAGCAAGAAGAAGCCAACAAAATGTACTGACATTT...GACATGTGGCTGCAGTCGTTGACTTTTACCCTTCTGTGTGTTCTTACATTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CAA 90 bp | TGGATTCTTGGAGAGTATGAATCCGTTTTCACAAGGAATGACATCCCTAATAAGTGTCAGTACATTTTGTaGGCTTCTTCTTGCTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: WILGEYESVFTRNDIPNKCQYIL*ASSCSS Trigger: GGAAGAGCAAGAAGAAGCCAACAAAATGTACTGACA...CTTATTAGGGATGTCATTCCTTGTGAAAACGGATTCATACTCTCCAAGAATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGCTATTCAAGCTTCAAAAGAGAAGAGCAACAAATTGTGTTACCCAGCTCTAGAAGTCAATGGATTCTaGGAGAGTATGAATCCGTTT | + |
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Preference number: 3 (lower is better) Translates to: GAIQASKEKSNKLCYPALEVNGF*ESMNPF Trigger: AAACGGATTCATACTCTCCAAGAATCCATTGACTTC...TAGAGCTGGGTAACACAATTTGTTGCTCTTCTCTTTTGAAGCTTGAATAGCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR CCA 72 bp | AGAACCTATTACAGCCATTCTGCTATAGGAAGTCAATaGATTCTTGGAGAGTATGAATCCGTTTTCACAAGG | + |
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Preference number: 3 (lower is better) Translates to: RTYYSHSAIGSQ*ILGEYESVFTR Trigger: CCTTGTGAAAACGGATTCATACTCTCCAAGAATCCATTGACTTCCTATAGCAGAATGGCTGTAATAGGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR CCA 72 bp | CTGTCTAACTGGACTCAACATGAGGAAATCCATAGCTaGTACTGTAAACCTAGAAAACTATCCATAGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: LSNWTQHEEIHS*YCKPRKLSIAR Trigger: TCTAGCTATGGATAGTTTTCTAGGTTTACAGTACCAGCTATGGATTTCCTCATGTTGAGTCCAGTTAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGCTTCAAAAGAGAAGAGCAACAAATTGTGTTACCCAGCTCTAAAGTCTATTGTCAGTACATTTTGTaGGCTTCTTCTTGCTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: SSFKREEQQIVLPSSKVYCQYIL*ASSCSS Trigger: GGAAGAGCAAGAAGAAGCCAACAAAATGTACTGACA...ATAGACTTTAGAGCTGGGTAACACAATTTGTTGCTCTTCTCTTTTGAAGCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CAA 90 bp | TGGATTCTTGGAGAGTATGAATCCGTTTTCACAAGGAATGACATCCCTAATAAGAACTTTTGTCTTCATTaGGAAGAAATTGTCCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: WILGEYESVFTRNDIPNKNFCLH*EEIVPS Trigger: GGAAGGGACAATTTCTTCCAAATGAAGACAAAAGTT...CTTATTAGGGATGTCATTCCTTGTGAAAACGGATTCATACTCTCCAAGAATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGCTTCAAAAGAGAAGAGCAACAAATTGTGTTACCCAGCTCTAAAGTCTATAACTTTTGTCTTCATTaGGAAGAAATTGTCCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: SSFKREEQQIVLPSSKVYNFCLH*EEIVPS Trigger: GGAAGGGACAATTTCTTCCAAATGAAGACAAAAGTT...ATAGACTTTAGAGCTGGGTAACACAATTTGTTGCTCTTCTCTTTTGAAGCTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR TCA 90 bp | TGGGAGGCAAAGACAGGTGGATTTCTGAGTTCCAGGCCAGCCTGGTCTGCAGAGATAAATCATCTTGGGTaGAGTGGCAGAAGAAATACC | + |
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Preference number: 4 (lower is better) Translates to: WEAKTGGFLSSRPAWSAEINHLG*SGRRNT Trigger: GGTATTTCTTCTGCCACTTCACCCAAGATGATTTAT...CTCTGCAGACCAGGCTGGCCTGGAACTCAGAAATCCACCTGTCTTTGCCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR GCA 90 bp | GGTCTGCAGAGTGAGTTCCTGGACAGCCAGGGCAACACAGACAAATTCTGTCTTGACAGTTTCCCATCATaGTTGCCACATACAACACTG | + |
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Preference number: 4 (lower is better) Translates to: GLQSEFLDSQGNTDKFCLDSFPS*LPHTTL Trigger: CAGTGTTGTATGTGGCAAGCATGATGGGAAACTGTC...AAGACAGAATTTGTCTGTGTTGCCCTGGCTGTCCAGGAACTCACTCTGCAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR TCA 90 bp | TGCCAATGTAAGAACACACAGAAGGGTAAAAGTCAACGACTGCAGCCACATGTCCAGGAACACAAACTCTaGTGTCACAGAATGATTCAC | + |
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Preference number: 4 (lower is better) Translates to: CQCKNTQKGKSQRLQPHVQEHKL*CHRMIH Trigger: GTGAATCATTCTGTGACATCAGAGTTTGTGTTCCTG...GACATGTGGCTGCAGTCGTTGACTTTTACCCTTCTGTGTGTTCTTACATTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR TCA 90 bp | GGTGCTATTCAAGCTTCAAAAGAGAAGAGCAACAAATTGTGTTACCCAGCTCTAATAGGAGAATGTAGCTaGGGGTCAGAAGCCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: GAIQASKEKSNKLCYPALIGECS*GSEATV Trigger: CACTGTGGCTTCTGACCCTCAGCTACATTCTCCTAT...TAGAGCTGGGTAACACAATTTGTTGCTCTTCTCTTTTGAAGCTTGAATAGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR TCA 90 bp | AACTGGACTCAACATGAGGAAATCCATAGCTGGTACTGTAAACCTAGAAAACTAATAGGAGAATGTAGCTaGGGGTCAGAAGCCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: NWTQHEEIHSWYCKPRKLIGECS*GSEATV Trigger: CACTGTGGCTTCTGACCCTCAGCTACATTCTCCTAT...TAGTTTTCTAGGTTTACAGTACCAGCTATGGATTTCCTCATGTTGAGTCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR GCA 90 bp | TTCTTGGAGAGTATGAATCCGTTTTCACAAGGAATGACATCCCTAATAAGTTGTGACAGTTTCCCATCATaGTTGCCACATACAACACTG | + |
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Preference number: 4 (lower is better) Translates to: FLESMNPFSQGMTSLISCDSFPS*LPHTTL Trigger: CAGTGTTGTATGTGGCAAGCATGATGGGAAACTGTC...ACAACTTATTAGGGATGTCATTCCTTGTGAAAACGGATTCATACTCTCCAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| 3UTR CAA 72 bp | TCTTGCTCTTCCACACATAGTTCACAAAACTTCTACTaGAACACTTTAGACTCCCAAGGGTTCTCTGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: SCSSTHSSQNFY*NTLDSQGFSEN Trigger: GTTTTCAGAGAACCCTTGGGAGTCTAAAGTGTTCAAGTAGAAGTTTTGTGAACTATGTGTGGAAGAGCAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR TCA 90 bp | TGGATTCTTGGAGAGTATGAATCCGTTTTCACAAGGAATGACATCCCTAATAAGTTTGTAGGAACCACTTaGAGAGTGTTTCAGAACAGT | + |
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Preference number: 4 (lower is better) Translates to: WILGEYESVFTRNDIPNKFVGTT*RVFQNS Trigger: ACTGTTCTGAAACACTCTTCAAGTGGTTCCTACAAA...CTTATTAGGGATGTCATTCCTTGTGAAAACGGATTCATACTCTCCAAGAATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR CCA 90 bp | ACTCAACATGAGGAAATCCATAGCTGGTACTGTAAACCTAGAAAACTATCCATAAGAAAGAGCAGCAGTTaGATATTCCAGGAGTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: TQHEEIHSWYCKPRKLSIRKSSS*IFQEFV Trigger: CACAAACTCCTGGAATATCCAACTGCTGCTCTTTCT...TATGGATAGTTTTCTAGGTTTACAGTACCAGCTATGGATTTCCTCATGTTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR CCA 90 bp | TGGACTCAACATGAGGAAATCCATAGCTGGTACTGTAAACCTAGAAAACTATCCTCATCTTGGGTGAAGTaGCAGAAGAAATACCTATAT | + |
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Preference number: 4 (lower is better) Translates to: WTQHEEIHSWYCKPRKLSSSWVK*QKKYLY Trigger: ATATAGGTATTTCTTCTGCCACTTCACCCAAGATGA...GGATAGTTTTCTAGGTTTACAGTACCAGCTATGGATTTCCTCATGTTGAGTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR CCA 90 bp | TTCTTGGAGAGTATGAATCCGTTTTCACAAGGAATGACATCCCTAATAAGTTGTTCATCTTGGGTGAAGTaGCAGAAGAAATACCTATAT | + |
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Preference number: 4 (lower is better) Translates to: FLESMNPFSQGMTSLISCSSWVK*QKKYLY Trigger: ATATAGGTATTTCTTCTGCCACTTCACCCAAGATGA...ACAACTTATTAGGGATGTCATTCCTTGTGAAAACGGATTCATACTCTCCAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR CAA 90 bp | TGGGAGGCAAAGACAGGTGGATTTCTGAGTTCCAGGCCAGCCTGGTCTGCAGAGCAGAAAGAGCAGCAGTaGGATATTCCAGGAGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: WEAKTGGFLSSRPAWSAEQKEQQ*DIPGVC Trigger: ACAAACTCCTGGAATATCCAACTGCTGCTCTTTCTG...CTCTGCAGACCAGGCTGGCCTGGAACTCAGAAATCCACCTGTCTTTGCCTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR CAA 90 bp | TGGGAGGCAAAGACAGGTGGATTTCTGAGTTCCAGGCCAGCCTGGTCTGCAGAGCTTTGTAGGAACCACTaGAAGAGTGTTTCAGAACAG | + |
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Preference number: 5 (lower is better) Translates to: WEAKTGGFLSSRPAWSAELCRNH*KSVSEQ Trigger: CTGTTCTGAAACACTCTTCAAGTGGTTCCTACAAAG...CTCTGCAGACCAGGCTGGCCTGGAACTCAGAAATCCACCTGTCTTTGCCTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR CAA 90 bp | TGCCAATGTAAGAACACACAGAAGGGTAAAAGTCAACGACTGCAGCCACATGTCCAGAAAGAGCAGCAGTaGGATATTCCAGGAGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: CQCKNTQKGKSQRLQPHVQKEQQ*DIPGVC Trigger: ACAAACTCCTGGAATATCCAACTGCTGCTCTTTCTG...GACATGTGGCTGCAGTCGTTGACTTTTACCCTTCTGTGTGTTCTTACATTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS-3UTR CAA 90 bp | TGCCAATGTAAGAACACACAGAAGGGTAAAAGTCAACGACTGCAGCCACATGTCCTTTGTAGGAACCACTaGAAGAGTGTTTCAGAACAG | + |
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Preference number: 5 (lower is better) Translates to: CQCKNTQKGKSQRLQPHVLCRNH*KSVSEQ Trigger: CTGTTCTGAAACACTCTTCAAGTGGTTCCTACAAAG...GACATGTGGCTGCAGTCGTTGACTTTTACCCTTCTGTGTGTTCTTACATTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS GCA 90 bp | CCACAGAGAGGTAAATTTACTATGAAAACCAGTTGTATCACAGAGTaGATAAGACCAACTACCCAGGCAGTAATTAAAAAGAAGATGCAC | + |
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Preference number: 5 (lower is better) Translates to: PQRGKFTMKTSCITE*IRPTTQAVIKKKMH Trigger: GTGCATCTTCTTTTTAATTACTGCCTGGGTAGTTGGTCTTATGCACTCTGTGATACAACTGGTTTTCATAGTAAATTTACCTCTCTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099599.5 ENSMUST00000213577.2 ENSMUST00000216071.2 |
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| CDS GCA 72 bp | GGTAAATTTACTATGAAAACCAGTTGTATCACAGAGTaGATAAGACCAACTACCCAGGCAGTAATTAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: GKFTMKTSCITE*IRPTTQAVIKK Trigger: CTTTTTAATTACTGCCTGGGTAGTTGGTCTTATGCACTCTGTGATACAACTGGTTTTCATAGTAAATTTACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099599.5 ENSMUST00000213577.2 ENSMUST00000216071.2 |
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