Pregenerated sensors for OLFR1312 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074947Ensembl transcript IDs: ENSMUST00000213582.2, ENSMUST00000213961.3, ENSMUST00000215531.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCTATaGCCTCTGCATCAGCTCCTGCTCCCTGACCTGCTTGAGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: AEQARGSKPVKNIPL*PLHQLLLPDLLEFQ Trigger: CTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATAGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTTGCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR TCA 90 bp | ATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGAACCATCTCTaGGCTGGCAGCCTTGGTTCTATTAGAGAGCAGGCTGAGCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: ISDQGGKAPCGWNHL*AGSLGSIREQAEQA Trigger: GGCTTGCTCAGCCTGCTCTCTAATAGAACCAAGGCTGCCAGCTCAGAGATGGTTCCACCCACAAGGGGCCTTTCCCCCTTGATCACTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR TCA 90 bp | TGTAGGACATCAATGAGAGCAGAGGCCTTTGGTCCTGTGAAGGCTTaGTGCCCCAGTGTAAGGGAATTCCAGGGCAGGGAAGCAGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: CRTSMRAEAFGPVKA*CPSVREFQGREAGV Trigger: CACTCCTGCTTCCCTGCCCTGGAATTCCCTTACACTGGGGCATCAAGCCTTCACAGGACCAAAGGCCTCTGCTCTCATTGATGTCCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR GCA 90 bp | GACAGGATGCCATGGTTCCAGGAAACTAAGTTTCCGAGAACTTTTTaGCTCTGGACTGCGTCCAGGTTTCTAGGCCTGACACTCGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: DRMPWFQETKFPRTF*LWTASRFLGLTLES Trigger: TGACTCGAGTGTCAGGCCTAGAAACCTGGACGCAGTCCAGAGGCAAAAAGTTCTCGGAAACTTAGTTTCCTGGAACCATGGCATCCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR CCA 90 bp | ATGCCATGGTTCCAGGAAACTAAGTTTCCGAGAACTTTTTGCCTCTaGACTGCGTCCAGGTTTCTAGGCCTGACACTCGAGTCACTACTG | + |
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Preference number: 1 (lower is better) Translates to: MPWFQETKFPRTFCL*TASRFLGLTLESLL Trigger: CAGTAGTGACTCGAGTGTCAGGCCTAGAAACCTGGACGCAGTCCAGAGGCAAAAAGTTCTCGGAAACTTAGTTTCCTGGAACCATGGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR TCA 90 bp | CAAGGTGCTGAAGGAACTTGCAGCCCCATAGAAGGAACAACAATATaGACCCACCAGAAATTCCAGAGATCCCAGGGACTAAACCACCAA | + |
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Preference number: 1 (lower is better) Translates to: QGAEGTCSPIEGTTI*THQKFQRSQGLNHQ Trigger: TTGGTGGTTTAGTCCCTGGGATCTCTGGAATTTCTGGTGGGTTCATATTGTTGTTCCTTCTATGGGGCTGCAAGTTCCTTCAGCACCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR GCA 90 bp | AAGAAAGCACACAGATCCATACACCCGACTAACAAGGGGACAGGATaGCATGGTTCCAGGAAACTAAGTTTCCGAGAACTTTTTGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: KKAHRSIHPTNKGTG*HGSRKLSFRELFAS Trigger: AGAGGCAAAAAGTTCTCGGAAACTTAGTTTCCTGGAACCATGGCATCCTGTCCCCTTGTTAGTCGGGTGTATGGATCTGTGTGCTTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR CCA 90 bp | CAGCAGCGTTCCTTGGTGTGGGTAGCTGGTCCTACCTTACTTGAATaGGTGTTTGGAGCTCTGCTATTACCCAAACTTAAAAGATTAAGC | + |
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Preference number: 1 (lower is better) Translates to: QQRSLVWVAGPTLLE*VFGALLLPKLKRLS Trigger: GCTTAATCTTTTAAGTTTGGGTAATAGCAGAGCTCCAAACACCCATTCAAGTAAGGTAGGACCAGCTACCCACACCAAGGAACGCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR CCA 90 bp | GTAGAGGAGAAACTGAAGGTAAAGCCACCCAGAAACTGTCCTACCTaGGGATCCATCCCATATAGAGTTACTAAACCCAGACACTATTGT | + |
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Preference number: 1 (lower is better) Translates to: VEEKLKVKPPRNCPT*GSIPYRVTKPRHYC Trigger: ACAATAGTGTCTGGGTTTAGTAACTCTATATGGGATGGATCCCCAGGTAGGACAGTTTCTGGGTGGCTTTACCTTCAGTTTCTCCTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR CCA 90 bp | GCCTCTGCTTATCATAAACAGTTCTATTCAAAAGCAGACAGAGTCTaGAAAGATAGTTCAGCTTTTAAGGGTATGTACTACCCTTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: ASAYHKQFYSKADRV*KDSSAFKGMYYPFR Trigger: TCTGAAAGGGTAGTACATACCCTTAAAAGCTGAACTATCTTTCCAGACTCTGTCTGCTTTTGAATAGAACTGTTTATGATAAGCAGAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR TCA 90 bp | GTCATGACTTCTTTCAGTGATGAAAAGCAATGTGGAAATGTAAGCTaGATAAACTCTTTCTTCCCCAACTTGTTTCTTGGTCATGATGTT | + |
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Preference number: 1 (lower is better) Translates to: VMTSFSDEKQCGNVS*INSFFPNLFLGHDV Trigger: AACATCATGACCAAGAAACAAGTTGGGGAAGAAAGAGTTTATTCAGCTTACATTTCCACATTGCTTTTCATCACTGAAAGAAGTCATGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR TCA 90 bp | ACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTAGAGATTaGAGACAGGATATAAACTTTGAGAATAATAGTGGTCCTATAAAC | + |
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Preference number: 1 (lower is better) Translates to: TFATYLGHVGPKGRD*RQDINFENNSGPIN Trigger: GTTTATAGGACCACTATTATTCTCAAAGTTTATATCCTGTCTTCAATCTCTACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGGAACCATCTCTGAGCTGGCAGCCTTGGTTCTATTAGAGAGCAGGCTGTCCCTCTATGGCCTCTaGATCAGCTCCTGCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: VGGTISELAALVLLESRLSLYGL*ISSCSL Trigger: CAGGGAGCAGGAGCTGATGCAGAGGCCATAGAGGGA...CAGCCTGCTCTCTAATAGAACCAAGGCTGCCAGCTCAGAGATGGTTCCACCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTATGGCCTCTGCATCAGCTCCTGCTCCCTGACCTGCTTGAGTTCCAGTCAATTGGACTATCCAAATaGCAGCCTTCTTTTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: PLWPLHQLLLPDLLEFQSIGLSK*QPSFGV Trigger: CACTCCAAAAGAAGGCTGCCATTTGGATAGTCCAAT...TGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGAAGCAAGCCAGTAAAGAACATCCCTCTATGGCCTCTGCATCAGCTCCTTCCTGGGCACCTTCTTaGTGTTACAAACATACCTCA | + |
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Preference number: 2 (lower is better) Translates to: QGKQASKEHPSMASASAPSWAPS*CYKHTS Trigger: TGAGGTATGTTTGTAACAGCAAGAAGGTGCCCAGGA...AGGAGCTGATGCAGAGGCCATAGAGGGATGTTCTTTACTGGCTTGCTTCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTGGTGTCACAGTCAGAATGGGAATGCTACCTAGGGGAAGTACACTGAGCAAGAACATCCCTCTATaGCCTCTGCATCAGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: KLGVTVRMGMLPRGSTLSKNIPL*PLHQLL Trigger: CAGGAGCTGATGCAGAGGCCATAGAGGGATGTTCTT...GCTCAGTGTACTTCCCCTAGGTAGCATTCCCATTCTGACTGTGACACCAAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR CAA 90 bp | CTGTGGAAGGTTCACCAAGTCCTGTACATAGACCTGTGGAAAAGCTaGGTGTCACAGTCAGAATGGGAATGCTACCTAGGGGAAGTACAC | + |
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Preference number: 2 (lower is better) Translates to: LWKVHQVLYIDLWKS*VSQSEWECYLGEVH Trigger: GTGTACTTCCCCTAGGTAGCATTCCCATTCTGACTGTGACACCAAGCTTTTCCACAGGTCTATGTACAGGACTTGGTGAACCTTCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR-3UTR TCA 90 bp | AAAACAGAAAGAGATTCTCACTTATGGCCCTCAAAAGACTGTGGAAGGTTCACCGGGTGGAACCATCTCTaGGCTGGCAGCCTTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: KTERDSHLWPSKDCGRFTGWNHL*AGSLGS Trigger: AGAACCAAGGCTGCCAGCTCAGAGATGGTTCCACCC...GGTGAACCTTCCACAGTCTTTTGAGGGCCATAAGTGAGAATCTCTTTCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGGAACCATCTCTGAGCTGGCAGCCTTGGTTCTATTAGAGAGCAGGCTGCTTCAGCATATTCAATaGCCTCTCCAAATTTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VGGTISELAALVLLESRLLQHIQ*PLQICR Trigger: TCTGCAAATTTGGAGAGGGCATTGAATATGCTGAAG...CAGCCTGCTCTCTAATAGAACCAAGGCTGCCAGCTCAGAGATGGTTCCACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATCAGCTCCTGCTCCCTGACCTGCTTGAGTTCCAGTCATGACTTCTTTCAGTCCTGGGCACCTTCTTaGTGTTACAAACATACCTCA | + |
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Preference number: 2 (lower is better) Translates to: CISSCSLTCLSSSHDFFQSWAPS*CYKHTS Trigger: TGAGGTATGTTTGTAACAGCAAGAAGGTGCCCAGGA...CTGAAAGAAGTCATGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR GCA 90 bp | GTAATGCCTGATTTCCTTCACTGTCTCCCTTATAATACTAGAGGTAATTCTAAATCCCTCTATGGCCTCTaGATCAGCTCCTGCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: VMPDFLHCLPYNTRGNSKSLYGL*ISSCSL Trigger: CAGGGAGCAGGAGCTGATGCAGAGGCCATAGAGGGA...TTTAGAATTACCTCTAGTATTATAAGGGAGACAGTGAAGGAAATCAGGCATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR-3UTR TCA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTAGAGGAAATGCCTCCATaGGATCCAACTGTAAGGCGT | + |
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Preference number: 2 (lower is better) Translates to: FISKIHLQLTWDMWDLKVEEMPP*DPTVRR Trigger: ACGCCTTACAGTTGGATCTCATGGAGGCATTTCCTC...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCTTGGTCATGATGTTTTGTCCAGGAATAGAAACCCTGACTAAGACACTGATTGGACTATCCAAATaGCAGCCTTCTTTTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: CFLVMMFCPGIETLTKTLIGLSK*QPSFGV Trigger: CACTCCAAAAGAAGGCTGCCATTTGGATAGTCCAAT...CAGTGTCTTAGTCAGGGTTTCTATTCCTGGACAAAACATCATGACCAAGAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGCTATTACCCAAACTTAAAAGATTAAGCACAGATAAACAGGGATCTGAAAATAGGTGCAGCTACTaGGTGTTAGATCAGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ALLLPKLKRLSTDKQGSENRCSY*VLDQVF Trigger: GAAGACCTGATCTAACACTCAGTAGCTGCACCTATT...TTCAGATCCCTGTTTATCTGTGCTTAATCTTTTAAGTTTGGGTAATAGCAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCTATTACCCAAACTTAAAAGATTAAGCACAGATAAACAGGGATCTGAATATGACAGCAAGATCTaGATGGGGGAAGCTGACTTA | + |
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Preference number: 2 (lower is better) Translates to: ALLLPKLKRLSTDKQGSEYDSKI*MGEADL Trigger: TAAGTCAGCTTCCCCCATCCAGATCTTGCTGTCATA...TTCAGATCCCTGTTTATCTGTGCTTAATCTTTTAAGTTTGGGTAATAGCAGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR-3UTR GCA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTATCCTGGGCACCTTCTTaGTGTTACAAACATACCTCA | + |
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Preference number: 2 (lower is better) Translates to: FISKIHLQLTWDMWDLKVSWAPS*CYKHTS Trigger: TGAGGTATGTTTGTAACAGCAAGAAGGTGCCCAGGA...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR CCA 90 bp | AAAACAGAAAGAGATTCTCACTTATGGCCCTCAAAAGACTGTGGAAGGTTCACCCTTAGGCAATGCCTGTaGTTTTTATTAGTAAGATAC | + |
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Preference number: 2 (lower is better) Translates to: KTERDSHLWPSKDCGRFTLRQCL*FLLVRY Trigger: GTATCTTACTAATAAAAACCACAGGCATTGCCTAAG...GGTGAACCTTCCACAGTCTTTTGAGGGCCATAAGTGAGAATCTCTTTCTGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGCTATTACCCAAACTTAAAAGATTAAGCACAGATAAACAGGGATCTGAACTTGAGTTCCAGTCATaGCTTCTTTCAGTGATGAAA | + |
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Preference number: 2 (lower is better) Translates to: ALLLPKLKRLSTDKQGSELEFQS*LLSVMK Trigger: TTTCATCACTGAAAGAAGTCATGACTGGAACTCAAG...TTCAGATCCCTGTTTATCTGTGCTTAATCTTTTAAGTTTGGGTAATAGCAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR-3UTR CCA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTAATTGGACTATCCAAATaGCAGCCTTCTTTTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: FISKIHLQLTWDMWDLKVIGLSK*QPSFGV Trigger: CACTCCAAAAGAAGGCTGCCATTTGGATAGTCCAAT...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGGAAATGTAAGCTGAATAAACTCTTTCTTCCCCAACTTGTTTCTTGGTCATGTATAAATGCTCTGTaGAATGTAGCAAAAAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: MWKCKLNKLFLPQLVSWSCINAL*NVAKSL Trigger: GAGGCTTTTTGCTACATTTCACAGAGCATTTATACA...TGACCAAGAAACAAGTTGGGGAAGAAAGAGTTTATTCAGCTTACATTTCCACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR TCA 90 bp | GTAATGCCTGATTTCCTTCACTGTCTCCCTTATAATACTAGAGGTAATTCTAAATGTGGAAATGTAAGCTaGATAAACTCTTTCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: VMPDFLHCLPYNTRGNSKCGNVS*INSFFP Trigger: GGGGAAGAAAGAGTTTATTCAGCTTACATTTCCACA...TTTAGAATTACCTCTAGTATTATAAGGGAGACAGTGAAGGAAATCAGGCATTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR-3UTR TCA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTATGTGGAAATGTAAGCTaGATAAACTCTTTCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: FISKIHLQLTWDMWDLKVCGNVS*INSFFP Trigger: GGGGAAGAAAGAGTTTATTCAGCTTACATTTCCACA...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTACTTCAGCATATTCAATaGCCTCTCCAAATTTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: FISKIHLQLTWDMWDLKVLQHIQ*PLQICR Trigger: TCTGCAAATTTGGAGAGGGCATTGAATATGCTGAAG...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGCTATTACCCAAACTTAAAAGATTAAGCACAGATAAACAGGGATCTGAATTTTCACACTTCATTTaGTGTAAACTTGGTGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: ALLLPKLKRLSTDKQGSEFSHFI*CKLGAQ Trigger: TTGGGCACCAAGTTTACAGCAAATGAAGTGTGAAAA...TTCAGATCCCTGTTTATCTGTGCTTAATCTTTTAAGTTTGGGTAATAGCAGAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR-3UTR TCA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTATGTATAAATGCTCTGTaGAATGTAGCAAAAAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: FISKIHLQLTWDMWDLKVCINAL*NVAKSL Trigger: GAGGCTTTTTGCTACATTTCACAGAGCATTTATACA...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAATGTATATGTTAGACTCTTATGTACACTCAAAAATTCTAACCTCCTCCCATGTATAAATGCTCTGTaGAATGTAGCAAAAAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: ANVYVRLLCTLKNSNLLPCINAL*NVAKSL Trigger: GAGGCTTTTTGCTACATTTCACAGAGCATTTATACA...TGGGAGGAGGTTAGAATTTTTGAGTGTACATAAGAGTCTAACATATACATTTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR TCA 72 bp | CAAGGGGGAAAGGCCCCTTGTGGGTGGAACCATCTCTaGGCTGGCAGCCTTGGTTCTATTAGAGAGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: QGGKAPCGWNHL*AGSLGSIREQA Trigger: AGCCTGCTCTCTAATAGAACCAAGGCTGCCAGCTCAGAGATGGTTCCACCCACAAGGGGCCTTTCCCCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR CCA 72 bp | GCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCTATaGCCTCTGCATCAGCTCCTGCTCCCTGACCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: ARGSKPVKNIPL*PLHQLLLPDLL Trigger: AAGCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATAGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| 3UTR TCA 72 bp | TCAATGAGAGCAGAGGCCTTTGGTCCTGTGAAGGCTTaGTGCCCCAGTGTAAGGGAATTCCAGGGCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: SMRAEAFGPVKA*CPSVREFQGRE Trigger: TTCCCTGCCCTGGAATTCCCTTACACTGGGGCATCAAGCCTTCACAGGACCAAAGGCCTCTGCTCTCATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR GCA 72 bp | AGGAGCCTTCCAGTGCCTGACAAATACACAAGTGGATaGTCAAAGGCAACCATTGAACTGAACACAGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: RSLPVPDKYTSG*SKATIELNTGS Trigger: GGACCCTGTGTTCAGTTCAATGGTTGCCTTTGAGCATCCACTTGTGTATTTGTCAGGCACTGGAAGGCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR GCA 72 bp | CCATGGTTCCAGGAAACTAAGTTTCCGAGAACTTTTTaGCTCTGGACTGCGTCCAGGTTTCTAGGCCTGACA | + |
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Preference number: 3 (lower is better) Translates to: PWFQETKFPRTF*LWTASRFLGLT Trigger: TGTCAGGCCTAGAAACCTGGACGCAGTCCAGAGGCAAAAAGTTCTCGGAAACTTAGTTTCCTGGAACCATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR CCA 72 bp | TTCCAGGAAACTAAGTTTCCGAGAACTTTTTGCCTCTaGACTGCGTCCAGGTTTCTAGGCCTGACACTCGAG | + |
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Preference number: 3 (lower is better) Translates to: FQETKFPRTFCL*TASRFLGLTLE Trigger: CTCGAGTGTCAGGCCTAGAAACCTGGACGCAGTCCAGAGGCAAAAAGTTCTCGGAAACTTAGTTTCCTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR-3UTR CAA 90 bp | ACCATTGAACTGAACACAGGGTCCCCAATGGAGGAGCTAGAGAAAGGACCCAAGTCATTTGCTGTAAACTaGGTGCCCAAGGCAGATAGT | + |
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Preference number: 3 (lower is better) Translates to: TIELNTGSPMEELEKGPKSFAVN*VPKADS Trigger: ACTATCTGCCTTGGGCACCAAGTTTACAGCAAATGA...CTTGGGTCCTTTCTCTAGCTCCTCCATTGGGGACCCTGTGTTCAGTTCAATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| 3UTR GCA 72 bp | CACAGATCCATACACCCGACTAACAAGGGGACAGGATaGCATGGTTCCAGGAAACTAAGTTTCCGAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: HRSIHPTNKGTG*HGSRKLSFREL Trigger: AAGTTCTCGGAAACTTAGTTTCCTGGAACCATGGCATCCTGTCCCCTTGTTAGTCGGGTGTATGGATCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| 3UTR TCA 72 bp | CACAGCTGGAGTTATCACAGACAAAGGAACTTCAGTTaGGGAAATGCCTCCATGAGATCCAACTGTAAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: HSWSYHRQRNFS*GNASMRSNCKA Trigger: CGCCTTACAGTTGGATCTCATGGAGGCATTTCCTCAACTGAAGTTCCTTTGTCTGTGATAACTCCAGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| 3UTR TCA 72 bp | CAGTCAGAATGGGAATGCTACCTAGGGGAAGTACACTaGGCATGTAGTTGTCAGGTGACAGGCATGAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QSEWECYLGEVH*ACSCQVTGMKL Trigger: TAACTTCATGCCTGTCACCTGACAACTACATGCTCAGTGTACTTCCCCTAGGTAGCATTCCCATTCTGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| 3UTR TCA 72 bp | GAAGGAACTTGCAGCCCCATAGAAGGAACAACAATATaGACCCACCAGAAATTCCAGAGATCCCAGGGACTA | + |
|
Preference number: 3 (lower is better) Translates to: EGTCSPIEGTTI*THQKFQRSQGL Trigger: TAGTCCCTGGGATCTCTGGAATTTCTGGTGGGTTCATATTGTTGTTCCTTCTATGGGGCTGCAAGTTCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| 3UTR GCA 72 bp | GATGCCAACAAGTATTTGCTGACAGGAGCCTTCCAGTaGCTGACAAATACACAAGTGGATGCTCAAAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: DANKYLLTGAFQ*LTNTQVDAQRQ Trigger: TTGCCTTTGAGCATCCACTTGTGTATTTGTCAGGCACTGGAAGGCTCCTGTCAGCAAATACTTGTTGGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| 3UTR CCA 72 bp | AGAAAGAGATTCTCACTTATGGCCCTCAAAAGACTGTaGAAGGTTCACCAAGTCCTGTACATAGACCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RKRFSLMALKRL*KVHQVLYIDLW Trigger: CCACAGGTCTATGTACAGGACTTGGTGAACCTTCCACAGTCTTTTGAGGGCCATAAGTGAGAATCTCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| 3UTR CCA 72 bp | TCCTTGGTGTGGGTAGCTGGTCCTACCTTACTTGAATaGGTGTTTGGAGCTCTGCTATTACCCAAACTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLVWVAGPTLLE*VFGALLLPKLK Trigger: TTTAAGTTTGGGTAATAGCAGAGCTCCAAACACCCATTCAAGTAAGGTAGGACCAGCTACCCACACCAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| 3UTR TCA 72 bp | GTTAAACCCACCGCCAGGGATCCTTTAGTAAATACCTaGTTATGCTATTCCTCTGGGCCTAGTGAAAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: VKPTARDPLVNT*LCYSSGPSEKH Trigger: ATGTTTTTCACTAGGCCCAGAGGAATAGCATAATCAGGTATTTACTAAAGGATCCCTGGCGGTGGGTTTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTGCTATTACCCAAACTTAAAAGATTAAGCACAGATAAACAGGGATCTGAAGATGCCAACAAGTATTaGCTGACAGGAGCCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALLLPKLKRLSTDKQGSEDANKY*LTGAFQ Trigger: CTGGAAGGCTCCTGTCAGCAAATACTTGTTGGCATC...TTCAGATCCCTGTTTATCTGTGCTTAATCTTTTAAGTTTGGGTAATAGCAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| 3UTR TCA 72 bp | TTGTTTCTGACTGTACTGGCTAGTTTTGTGTCAACTTaGCACAGCTGGAGTTATCACAGACAAAGGAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFLTVLASFVST*HSWSYHRQRNF Trigger: GAAGTTCCTTTGTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCAGTACAGTCAGAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| 3UTR TCA 72 bp | CATACCACTAGAGATGTATATTACGCATTTTGTTTCTaGCTGTACTGGCTAGTTTTGTGTCAACTTGACACA | + |
|
Preference number: 3 (lower is better) Translates to: HTTRDVYYAFCF*LYWLVLCQLDT Trigger: TGTGTCAAGTTGACACAAAACTAGCCAGTACAGTCAGAAACAAAATGCGTAATATACATCTCTAGTGGTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| 3UTR TCA 72 bp | ACTTACTTGGGACATGTGGGACCTAAAGGTAGAGATTaGAGACAGGATATAAACTTTGAGAATAATAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TYLGHVGPKGRD*RQDINFENNSG Trigger: ACCACTATTATTCTCAAAGTTTATATCCTGTCTTCAATCTCTACCTTTAGGTCCCACATGTCCCAAGTAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| 3UTR TCA 72 bp | AGTTATGTCTGTTCATTTAGAAATAGGTGCAGCTACTaGGTGTTAGATCAGGTCTTCTGTAGAGTTAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SYVCSFRNRCSY*VLDQVFCRVKR Trigger: TCTCTTAACTCTACAGAAGACCTGATCTAACACTCAGTAGCTGCACCTATTTCTAAATGAACAGACATAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| 3UTR GCA 72 bp | GAAGACTGTGTTTGTCTGTGTTTCCAACTTAGGCAATaGCTGTGGTTTTTATTAGTAAGATACATTTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: EDCVCLCFQLRQ*LWFLLVRYICN Trigger: GTTGCAAATGTATCTTACTAATAAAAACCACAGGCATTGCCTAAGTTGGAAACACAGACAAACACAGTCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| 3UTR CCA 72 bp | GTGGTTTTTATTAGTAAGATACATTTGCAACTTACTTaGGACATGTGGGACCTAAAGGTAGAGATTGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VVFISKIHLQLT*DMWDLKVEIED Trigger: GTCTTCAATCTCTACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAAAACCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTAAATAAAATGAGAGTATaGGACTATCCAAATGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FISKIHLQLTWDMWDLKVNKMRV*DYPNGS Trigger: GCTGCCATTTGGATAGTCCAATACTCTCATTTTATT...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAATGCCTGATTTCCTTCACTGTCTCCCTTATAATACTAGAGGTAATTCTAAAAATAAAATGAGAGTATaGGACTATCCAAATGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VMPDFLHCLPYNTRGNSKNKMRV*DYPNGS Trigger: GCTGCCATTTGGATAGTCCAATACTCTCATTTTATT...TTTAGAATTACCTCTAGTATTATAAGGGAGACAGTGAAGGAAATCAGGCATTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| 3UTR CCA 72 bp | TATCATAAACAGTTCTATTCAAAAGCAGACAGAGTCTaGAAAGATAGTTCAGCTTTTAAGGGTATGTACTAC | + |
|
Preference number: 3 (lower is better) Translates to: YHKQFYSKADRV*KDSSAFKGMYY Trigger: GTAGTACATACCCTTAAAAGCTGAACTATCTTTCCAGACTCTGTCTGCTTTTGAATAGAACTGTTTATGATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| 3UTR CAA 72 bp | CCCCTTGTGGGTGGAACCATCTCTGAGCTGGCAGCCTaGGTTCTATTAGAGAGCAGGCTGAGCAAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLVGGTISELAA*VLLESRLSKPG Trigger: CCCTGGCTTGCTCAGCCTGCTCTCTAATAGAACCAAGGCTGCCAGCTCAGAGATGGTTCCACCCACAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR TCA 90 bp | AAGAACATCCCTCTATGGCCTCTGCATCAGCTCCTGCTCCCTGACCTGCTTGAGCACCCAGGAGGCCACTaGAAACAAGATGCACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNIPLWPLHQLLLPDLLEHPGGH*KQDAHP Trigger: AGGGTGTGCATCTTGTTTTCAGTGGCCTCCTGGGTG...CTCAAGCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATAGAGGGATGTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| 3UTR CAA 72 bp | ATCAATGAGAGCAGAGGCCTTTGGTCCTGTGAAGGCTaGATGCCCCAGTGTAAGGGAATTCCAGGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: INESRGLWSCEG*MPQCKGIPGQG Trigger: TCCCTGCCCTGGAATTCCCTTACACTGGGGCATCAAGCCTTCACAGGACCAAAGGCCTCTGCTCTCATTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| CDS-3UTR CCA 90 bp | TGCATCAGCTCCTGCTCCCTGACCTGCTTGAGTTCCAGTCATGACTTCTTTCAGGTGTGGACAGAGCCTTaGAGGAGCCACTTGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CISSCSLTCLSSSHDFFQVWTEP*RSHLKS Trigger: ACTCTTCAAGTGGCTCCTCCAAGGCTCTGTCCACAC...CTGAAAGAAGTCATGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| 3UTR CAA 72 bp | CCAAGGCATCTGGAAATAGGTCTTCAGCAGCGTTCCTaGGTGTGGGTAGCTGGTCCTACCTTACTTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PRHLEIGLQQRS*VWVAGPTLLEW Trigger: CCATTCAAGTAAGGTAGGACCAGCTACCCACACCAAGGAACGCTGCTGAAGACCTATTTCCAGATGCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| CDS-3UTR TCA 90 bp | GTGGGTGGAACCATCTCTGAGCTGGCAGCCTTGGTTCTATTAGAGAGCAGGCTGACTACGAAAGCCAGTTaGACCAGAGAATGCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGGTISELAALVLLESRLTTKAS*TRECIK Trigger: CTTTATGCATTCTCTGGTTCAACTGGCTTTCGTAGT...CAGCCTGCTCTCTAATAGAACCAAGGCTGCCAGCTCAGAGATGGTTCCACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGTGGAACCATCTCTGAGCTGGCAGCCTTGGTTCTATTAGAGAGCAGGCTGGGTTCAGAAAGGGTGTaGCAATTGCATCAAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGTISELAALVLLESRLGSERV*QLHQIW Trigger: CCATATTTGATGCAATTGTCACACCCTTTCTGAACC...CAGCCTGCTCTCTAATAGAACCAAGGCTGCCAGCTCAGAGATGGTTCCACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTATGGCCTCTGCATCAGCTCCTGCTCCCTGACCTGCTTGAGTTCCAGTCAGTTTCCCATCATGCTTaGCACATAAAATATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLWPLHQLLLPDLLEFQSVSHHA*HIKYGG Trigger: TCCTCCATATTTTATGTGGCAAGCATGATGGGAAAC...TGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTATGGCCTCTGCATCAGCTCCTGCTCCCTGACCTGCTTGAGTTCCAGTCAGTGAGTTTCCCATCATaGTTGCCACATAAAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: PLWPLHQLLLPDLLEFQSVSFPS*LPHKIW Trigger: CCATATTTTATGTGGCAAGCATGATGGGAAACTCAC...TGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGGAAGCAAGCCAGTAAAGAACATCCCTCTATGGCCTCTGCATCAGCTCCTAGTCTGAAACCACAGTaGACACAATCAGTGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGKQASKEHPSMASASAPSLKPQ*TQSVSF Trigger: GAAACTCACTGATTGTGTTCACTGTGGTTTCAGACT...AGGAGCTGATGCAGAGGCCATAGAGGGATGTTCTTTACTGGCTTGCTTCCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR GCA 90 bp | AAGAACATCCCTCTATGGCCTCTGCATCAGCTCCTGCTCCCTGACCTGCTTGAGGTGAGTTTCCCATCATaGTTGCCACATAAAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: KNIPLWPLHQLLLPDLLEVSFPS*LPHKIW Trigger: CCATATTTTATGTGGCAAGCATGATGGGAAACTCAC...CTCAAGCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATAGAGGGATGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR TCA 90 bp | TGCATCAGCTCCTGCTCCCTGACCTGCTTGAGTTCCAGTCATGACTTCTTTCAGCAGGAATACAAACTCTaGCACCACAGACTGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CISSCSLTCLSSSHDFFQQEYKL*HHRLIH Trigger: ATGAATCAGTCTGTGGTGTCAGAGTTTGTATTCCTG...CTGAAAGAAGTCATGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR TCA 90 bp | TACCCTTTCAGAAGACCCAAGATTGGTTCCCAGAATCTAAGTCAGATGGTTCAACACCCAGGAGGCCACTaGAAACAAGATGCACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: YPFRRPKIGSQNLSQMVQHPGGH*KQDAHP Trigger: AGGGTGTGCATCTTGTTTTCAGTGGCCTCCTGGGTG...TTGAACCATCTGACTTAGATTCTGGGAACCAATCTTGGGTCTTCTGAAAGGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR GCA 90 bp | TGCATCAGCTCCTGCTCCCTGACCTGCTTGAGTTCCAGTCATGACTTCTTTCAGGTTTCCCATCATGCTTaGCACATAAAATATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CISSCSLTCLSSSHDFFQVSHHA*HIKYGG Trigger: TCCTCCATATTTTATGTGGCAAGCATGATGGGAAAC...CTGAAAGAAGTCATGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAAGCAAGCCAGTAAAGAACATCCCTCTATGGCCTCTGCATCAGCTCCTAAAGGGTGTGACAATTaGATCAAATATGGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QGKQASKEHPSMASASAPKGCDN*IKYGQK Trigger: TTTCTGGCCATATTTGATGCAATTGTCACACCCTTT...AGGAGCTGATGCAGAGGCCATAGAGGGATGTTCTTTACTGGCTTGCTTCCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR CCA 90 bp | TACCCTTTCAGAAGACCCAAGATTGGTTCCCAGAATCTAAGTCAGATGGTTCAAATAGGAGAGTGTAAGTaGGAGTCTGAAACCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YPFRRPKIGSQNLSQMVQIGECK*ESETTV Trigger: CACTGTGGTTTCAGACTCCCACTTACACTCTCCTAT...TTGAACCATCTGACTTAGATTCTGGGAACCAATCTTGGGTCTTCTGAAAGGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR TCA 90 bp | AAAACAGAAAGAGATTCTCACTTATGGCCCTCAAAAGACTGTGGAAGGTTCACCAGTCTGAAACCACAGTaGACACAATCAGTGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTERDSHLWPSKDCGRFTSLKPQ*TQSVSF Trigger: GAAACTCACTGATTGTGTTCACTGTGGTTTCAGACT...GGTGAACCTTCCACAGTCTTTTGAGGGCCATAAGTGAGAATCTCTTTCTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTAGTGTGGACAGAGCCTTaGAGGAGCCACTTGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FISKIHLQLTWDMWDLKVVWTEP*RSHLKS Trigger: ACTCTTCAAGTGGCTCCTCCAAGGCTCTGTCCACAC...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTCTTGGTCATGATGTTTTGTCCAGGAATAGAAACCCTGACTAAGACACTGACTACGAAAGCCAGTTaGACCAGAGAATGCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CFLVMMFCPGIETLTKTLTTKAS*TRECIK Trigger: CTTTATGCATTCTCTGGTTCAACTGGCTTTCGTAGT...CAGTGTCTTAGTCAGGGTTTCTATTCCTGGACAAAACATCATGACCAAGAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTCTTGGTCATGATGTTTTGTCCAGGAATAGAAACCCTGACTAAGACACTGGGTTCAGAAAGGGTGTaGCAATTGCATCAAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: CFLVMMFCPGIETLTKTLGSERV*QLHQIW Trigger: CCATATTTGATGCAATTGTCACACCCTTTCTGAACC...CAGTGTCTTAGTCAGGGTTTCTATTCCTGGACAAAACATCATGACCAAGAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGGAAATGTAAGCTGAATAAACTCTTTCTTCCCCAACTTGTTTCTTGGTCAATAGGAGAGTGTAAGTaGGAGTCTGAAACCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MWKCKLNKLFLPQLVSWSIGECK*ESETTV Trigger: CACTGTGGTTTCAGACTCCCACTTACACTCTCCTAT...TGACCAAGAAACAAGTTGGGGAAGAAAGAGTTTATTCAGCTTACATTTCCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGGAAATGTAAGCTGAATAAACTCTTTCTTCCCCAACTTGTTTCTTGGTCACAGGAATACAAACTCTaGCACCACAGACTGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MWKCKLNKLFLPQLVSWSQEYKL*HHRLIH Trigger: ATGAATCAGTCTGTGGTGTCAGAGTTTGTATTCCTG...TGACCAAGAAACAAGTTGGGGAAGAAAGAGTTTATTCAGCTTACATTTCCACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTAATAGGAGAGTGTAAGTaGGAGTCTGAAACCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FISKIHLQLTWDMWDLKVIGECK*ESETTV Trigger: CACTGTGGTTTCAGACTCCCACTTACACTCTCCTAT...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR TCA 90 bp | GCAAATGTATATGTTAGACTCTTATGTACACTCAAAAATTCTAACCTCCTCCCACAGGAATACAAACTCTaGCACCACAGACTGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ANVYVRLLCTLKNSNLLPQEYKL*HHRLIH Trigger: ATGAATCAGTCTGTGGTGTCAGAGTTTGTATTCCTG...TGGGAGGAGGTTAGAATTTTTGAGTGTACATAAGAGTCTAACATATACATTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| CDS-3UTR TCA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTAACTACGAAAGCCAGTTaGACCAGAGAATGCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FISKIHLQLTWDMWDLKVTTKAS*TRECIK Trigger: CTTTATGCATTCTCTGGTTCAACTGGCTTTCGTAGT...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
||
| 3UTR CAA 72 bp | TTACAACCTCATTTTCACACTTCATTTGCTGTAAACTaGGTGCCCAAGGCAGATAGTATGATTCAGATACAT | + |
|
Preference number: 4 (lower is better) Translates to: LQPHFHTSFAVN*VPKADSMIQIH Trigger: ATGTATCTGAATCATACTATCTGCCTTGGGCACCAAGTTTACAGCAAATGAAGTGTGAAAATGAGGTTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
||
| CDS-3UTR GCA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTAGTGAGTTTCCCATCATaGTTGCCACATAAAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: FISKIHLQLTWDMWDLKVVSFPS*LPHKIW Trigger: CCATATTTTATGTGGCAAGCATGATGGGAAACTCAC...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR GCA 90 bp | ATGTGGAAATGTAAGCTGAATAAACTCTTTCTTCCCCAACTTGTTTCTTGGTCAAAAGGGTGTGACAATTaGATCAAATATGGCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: MWKCKLNKLFLPQLVSWSKGCDN*IKYGQK Trigger: TTTCTGGCCATATTTGATGCAATTGTCACACCCTTT...TGACCAAGAAACAAGTTGGGGAAGAAAGAGTTTATTCAGCTTACATTTCCACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | CCTCTATGGCCTCTGCATCAGCTCCTGCTCCCTGACCTGCTTGAGTTCCAGTCAAGGTCACAAATCATCTaGGGAGAAGTAACAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: PLWPLHQLLLPDLLEFQSRSQII*GEVTEE Trigger: TTCTTCTGTTACTTCTCCCAAGATGATTTGTGACCT...TGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | TACCCTTTCAGAAGACCCAAGATTGGTTCCCAGAATCTAAGTCAGATGGTTCAAAGTGTGGACAGAGCCTaGGAGGAGCCACTTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: YPFRRPKIGSQNLSQMVQSVDRA*EEPLEE Trigger: CTCTTCAAGTGGCTCCTCCAAGGCTCTGTCCACACT...TTGAACCATCTGACTTAGATTCTGGGAACCAATCTTGGGTCTTCTGAAAGGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | TGCATCAGCTCCTGCTCCCTGACCTGCTTGAGTTCCAGTCATGACTTCTTTCAGTACTACGAAAGCCAGTaGAACCAGAGAATGCATAAA | + |
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Preference number: 5 (lower is better) Translates to: CISSCSLTCLSSSHDFFQYYESQ*NQRMHK Trigger: TTTATGCATTCTCTGGTTCAACTGGCTTTCGTAGTA...CTGAAAGAAGTCATGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | TGCATCAGCTCCTGCTCCCTGACCTGCTTGAGTTCCAGTCATGACTTCTTTCAGGACATGAATCCACTATaGATTGAGACCAGTAATTCC | + |
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Preference number: 5 (lower is better) Translates to: CISSCSLTCLSSSHDFFQDMNPL*IETSNS Trigger: GGAATTACTGGTCTCAATCAATAGTGGATTCATGTC...CTGAAAGAAGTCATGACTGGAACTCAAGCAGGTCAGGGAGCAGGAGCTGATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | TGTTTCTTGGTCATGATGTTTTGTCCAGGAATAGAAACCCTGACTAAGACACTGAGTGTGGACAGAGCCTaGGAGGAGCCACTTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: CFLVMMFCPGIETLTKTLSVDRA*EEPLEE Trigger: CTCTTCAAGTGGCTCCTCCAAGGCTCTGTCCACACT...CAGTGTCTTAGTCAGGGTTTCTATTCCTGGACAAAACATCATGACCAAGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTAAGTGTGGACAGAGCCTaGGAGGAGCCACTTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: FISKIHLQLTWDMWDLKVSVDRA*EEPLEE Trigger: CTCTTCAAGTGGCTCCTCCAAGGCTCTGTCCACACT...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | TACCCTTTCAGAAGACCCAAGATTGGTTCCCAGAATCTAAGTCAGATGGTTCAAGACATGAATCCACTATaGATTGAGACCAGTAATTCC | + |
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Preference number: 5 (lower is better) Translates to: YPFRRPKIGSQNLSQMVQDMNPL*IETSNS Trigger: GGAATTACTGGTCTCAATCAATAGTGGATTCATGTC...TTGAACCATCTGACTTAGATTCTGGGAACCAATCTTGGGTCTTCTGAAAGGGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | GCTCTGCTATTACCCAAACTTAAAAGATTAAGCACAGATAAACAGGGATCTGAAAGGTCACAAATCATCTaGGGAGAAGTAACAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ALLLPKLKRLSTDKQGSERSQII*GEVTEE Trigger: TTCTTCTGTTACTTCTCCCAAGATGATTTGTGACCT...TTCAGATCCCTGTTTATCTGTGCTTAATCTTTTAAGTTTGGGTAATAGCAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| CDS-3UTR CAA 90 bp | ATGTGGAAATGTAAGCTGAATAAACTCTTTCTTCCCCAACTTGTTTCTTGGTCATACTACGAAAGCCAGTaGAACCAGAGAATGCATAAA | + |
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Preference number: 5 (lower is better) Translates to: MWKCKLNKLFLPQLVSWSYYESQ*NQRMHK Trigger: TTTATGCATTCTCTGGTTCAACTGGCTTTCGTAGTA...TGACCAAGAAACAAGTTGGGGAAGAAAGAGTTTATTCAGCTTACATTTCCACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | GCTCTGCTATTACCCAAACTTAAAAGATTAAGCACAGATAAACAGGGATCTGAAGACATGAATCCACTATaGATTGAGACCAGTAATTCC | + |
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Preference number: 5 (lower is better) Translates to: ALLLPKLKRLSTDKQGSEDMNPL*IETSNS Trigger: GGAATTACTGGTCTCAATCAATAGTGGATTCATGTC...TTCAGATCCCTGTTTATCTGTGCTTAATCTTTTAAGTTTGGGTAATAGCAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213961.3 |
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| CDS-3UTR CAA 90 bp | GCAAATGTATATGTTAGACTCTTATGTACACTCAAAAATTCTAACCTCCTCCCAAGGTCACAAATCATCTaGGGAGAAGTAACAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ANVYVRLLCTLKNSNLLPRSQII*GEVTEE Trigger: TTCTTCTGTTACTTCTCCCAAGATGATTTGTGACCT...TGGGAGGAGGTTAGAATTTTTGAGTGTACATAAGAGTCTAACATATACATTTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | ATGTGGAAATGTAAGCTGAATAAACTCTTTCTTCCCCAACTTGTTTCTTGGTCAACCAGTAATTCCAATTaGTATGTATCTGTGCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: MWKCKLNKLFLPQLVSWSTSNSN*YVSVQA Trigger: TGCTTGCACAGATACATACAAATTGGAATTACTGGT...TGACCAAGAAACAAGTTGGGGAAGAAAGAGTTTATTCAGCTTACATTTCCACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | TTTATTAGTAAGATACATTTGCAACTTACTTGGGACATGTGGGACCTAAAGGTAACCAGTAATTCCAATTaGTATGTATCTGTGCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: FISKIHLQLTWDMWDLKVTSNSN*YVSVQA Trigger: TGCTTGCACAGATACATACAAATTGGAATTACTGGT...TACCTTTAGGTCCCACATGTCCCAAGTAAGTTGCAAATGTATCTTACTAATAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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| CDS-3UTR CAA 90 bp | GCAAATGTATATGTTAGACTCTTATGTACACTCAAAAATTCTAACCTCCTCCCAACCAGTAATTCCAATTaGTATGTATCTGTGCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: ANVYVRLLCTLKNSNLLPTSNSN*YVSVQA Trigger: TGCTTGCACAGATACATACAAATTGGAATTACTGGT...TGGGAGGAGGTTAGAATTTTTGAGTGTACATAAGAGTCTAACATATACATTTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213582.2 ENSMUST00000213961.3 ENSMUST00000215531.2 |
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