Pregenerated sensors for OLFR1311 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000109403Ensembl transcript IDs: ENSMUST00000208536.3, ENSMUST00000213602.2, ENSMUST00000215321.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAGGATCACTAGCTGCTGGACCCGGGCTAGATCTGAAGAGTTTTaGAAAGTTGTTAAGGGTGCATACCAAACTGACTTCTTGAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: SRITSCWTRARSEEF*KVVKGAYQTDFLRR Trigger: CCTTCTCAAGAAGTCAGTTTGGTATGCACCCTTAACAACTTTTCAAAACTCTTCAGATCTAGCCCGGGTCCAGCAGCTAGTGATCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR TCA 90 bp | CAGGGAACTCTAACAGTGAAAATGAGTTATGCTTATCTTCAACAGTaGATTTCCTGGTATATTCTCTGTTTAGCCCCTCTTGAAGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: QGTLTVKMSYAYLQQ*ISWYILCLAPLEGF Trigger: AAAGCCTTCAAGAGGGGCTAAACAGAGAATATACCAGGAAATTCACTGTTGAAGATAAGCATAACTCATTTTCACTGTTAGAGTTCCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGCTCAGAAGTCAGCTGCAGTGCATGCACGGGTCGCCAAAGTGAGCAGGATTGCAAACACAGCCGTTaGTTTCCATATTCATCATCA | + |
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Preference number: 2 (lower is better) Translates to: GSSEVSCSACTGRQSEQDCKHSR*FPYSSS Trigger: TGATGATGAATATGGAAAGCAACGGCTGTGTTTGCA...ATCCTGCTCACTTTGGCGACCCGTGCATGCACTGCAGCTGACTTCTGAGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCTCAGAAGTCAGCTGCAGTGCATGCACGGGTCGCCAAAGTGAGCAGGATTTCTTGAGAAGGACTTaGGTACTGAGTAGTGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: GSSEVSCSACTGRQSEQDFLRRT*VLSSVV Trigger: AACTACACTACTCAGTACCCAAGTCCTTCTCAAGAA...ATCCTGCTCACTTTGGCGACCCGTGCATGCACTGCAGCTGACTTCTGAGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCTCAGAAGTCAGCTGCAGTGCATGCACGGGTCGCCAAAGTGAGCAGGATTTGGAACACCAGAACTaGTATATTAAGGGGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: GSSEVSCSACTGRQSEQDLEHQN*YIKGKI Trigger: GATTTTCCCCTTAATATACCAGTTCTGGTGTTCCAA...ATCCTGCTCACTTTGGCGACCCGTGCATGCACTGCAGCTGACTTCTGAGCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTTACAGATAGAAGAGGTTCTAGAGGGAGCTCAGAAGTCAGCTGCAGTGCATAGATCTGAAGAGTTTTaGAAAGTTGTTAAGGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLQIEEVLEGAQKSAAVHRSEEF*KVVKGA Trigger: TGCACCCTTAACAACTTTTCAAAACTCTTCAGATCT...ATGCACTGCAGCTGACTTCTGAGCTCCCTCTAGAACCTCTTCTATCTGTAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR TCA 72 bp | AGAAGTCAGCTGCAGTGCATGCACGGGTCGCCAAAGTaGGCAGGATCACTAGCTGCTGGACCCGGGCTAGAT | + |
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Preference number: 3 (lower is better) Translates to: RSQLQCMHGSPK*AGSLAAGPGLD Trigger: ATCTAGCCCGGGTCCAGCAGCTAGTGATCCTGCTCACTTTGGCGACCCGTGCATGCACTGCAGCTGACTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTTACAGATAGAAGAGGTTCTAGAGGGAGCTCAGAAGTCAGCTGCAGTGCATCCCCTCTTGAAGGCTTaGGAACACCAGAACTGGTAT | + |
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Preference number: 3 (lower is better) Translates to: LLQIEEVLEGAQKSAAVHPLLKA*EHQNWY Trigger: ATACCAGTTCTGGTGTTCCAAAGCCTTCAAGAGGGG...ATGCACTGCAGCTGACTTCTGAGCTCCCTCTAGAACCTCTTCTATCTGTAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR TCA 72 bp | ACTAGCTGCTGGACCCGGGCTAGATCTGAAGAGTTTTaGAAAGTTGTTAAGGGTGCATACCAAACTGACTTC | + |
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Preference number: 3 (lower is better) Translates to: TSCWTRARSEEF*KVVKGAYQTDF Trigger: GAAGTCAGTTTGGTATGCACCCTTAACAACTTTTCAAAACTCTTCAGATCTAGCCCGGGTCCAGCAGCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGGATTTTATTTAGGACCTATTAATAGCTATAATTCAGCTGCAAACACAGCCCCCCTCTTGAAGGCTTaGGAACACCAGAACTGGTAT | + |
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Preference number: 3 (lower is better) Translates to: GGFYLGPINSYNSAANTAPLLKA*EHQNWY Trigger: ATACCAGTTCTGGTGTTCCAAAGCCTTCAAGAGGGG...GGCTGTGTTTGCAGCTGAATTATAGCTATTAATAGGTCCTAAATAAAATCCCCC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR TCA 72 bp | GTGAATTTCCTGGTATATTCTCTGTTTAGCCCCTCTTaGAGGCTTTGGAACACCAGAACTGGTATATTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VNFLVYSLFSPS*RLWNTRTGILR Trigger: CCTTAATATACCAGTTCTGGTGTTCCAAAGCCTTCAAGAGGGGCTAAACAGAGAATATACCAGGAAATTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR-3UTR CAA 90 bp | GCTATAATTCAGCTGCAAACACAGCCGTTGCTTTCCATATTCATCATCACCAAAACTTTATTTTCCTCATaGTCACTGAGTGTAGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: AIIQLQTQPLLSIFIITKTLFSS*SLSVEL Trigger: CAACTCTACACTCAGTGACAATGAGGAAAATAAAGT...TTTGGTGATGATGAATATGGAAAGCAACGGCTGTGTTTGCAGCTGAATTATAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGGACCTATTAATAGCTATAATTCAGCTGCAAACACAGCCGTTGCTTTCCATACTTTATTTTCCTCATaGTCACTGAGTGTAGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: LGPINSYNSAANTAVAFHTLFSS*SLSVEL Trigger: CAACTCTACACTCAGTGACAATGAGGAAAATAAAGT...ATGGAAAGCAACGGCTGTGTTTGCAGCTGAATTATAGCTATTAATAGGTCCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR CCA 72 bp | AAGGGTGCATACCAAACTGACTTCTTGAGAAGGACTTaGGTACTGAGTAGTGTAGTTATTAAATTAAATGTT | + |
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Preference number: 3 (lower is better) Translates to: KGAYQTDFLRRT*VLSSVVIKLNV Trigger: AACATTTAATTTAATAACTACACTACTCAGTACCCAAGTCCTTCTCAAGAAGTCAGTTTGGTATGCACCCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | GGGAGCTCAGAAGTCAGCTGCAGTGCATGCACGGGTCGCCAAAGTGAGCAGGATTCACGGAGAACACAATaGGGAGGTTTCCCATCACAC | + |
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Preference number: 4 (lower is better) Translates to: GSSEVSCSACTGRQSEQDSRRTQ*GGFPSH Trigger: GTGTGATGGGAAACCTCCTCATTGTGTTCTCCGTGA...ATCCTGCTCACTTTGGCGACCCGTGCATGCACTGCAGCTGACTTCTGAGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR CCA 90 bp | GGGAGCTCAGAAGTCAGCTGCAGTGCATGCACGGGTCGCCAAAGTGAGCAGGATGGATTCCCCATCTATTaGAGAGTCCCAAGAACACAA | + |
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Preference number: 4 (lower is better) Translates to: GSSEVSCSACTGRQSEQDGFPIY*RVPRTQ Trigger: TTGTGTTCTTGGGACTCTCCAATAGATGGGGAATCC...ATCCTGCTCACTTTGGCGACCCGTGCATGCACTGCAGCTGACTTCTGAGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | GGGAGCTCAGAAGTCAGCTGCAGTGCATGCACGGGTCGCCAAAGTGAGCAGGATTATACAACCTCCAAATaGGATGGCTTTGTGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GSSEVSCSACTGRQSEQDYTTSK*DGFVLS Trigger: AGAAAGCACAAAGCCATCTCATTTGGAGGTTGTATA...ATCCTGCTCACTTTGGCGACCCGTGCATGCACTGCAGCTGACTTCTGAGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | GGGAGCTCAGAAGTCAGCTGCAGTGCATGCACGGGTCGCCAAAGTGAGCAGGATATATTTGTGGTCTCATaGTGGTCAAGTAGTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GSSEVSCSACTGRQSEQDIFVVS*WSSSEE Trigger: CTCTTCACTACTTGACCATCATGAGACCACAAATAT...ATCCTGCTCACTTTGGCGACCCGTGCATGCACTGCAGCTGACTTCTGAGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | TTGTTACAGATAGAAGAGGTTCTAGAGGGAGCTCAGAAGTCAGCTGCAGTGCATTCACGGAGAACACAATaGGGAGGTTTCCCATCACAC | + |
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Preference number: 4 (lower is better) Translates to: LLQIEEVLEGAQKSAAVHSRRTQ*GGFPSH Trigger: GTGTGATGGGAAACCTCCTCATTGTGTTCTCCGTGA...ATGCACTGCAGCTGACTTCTGAGCTCCCTCTAGAACCTCTTCTATCTGTAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | TTGTTACAGATAGAAGAGGTTCTAGAGGGAGCTCAGAAGTCAGCTGCAGTGCATCACAGTCACATGAGCTaGCAAAGTAGAGAGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLQIEEVLEGAQKSAAVHHSHMS*QSREGL Trigger: AAGGCCCTCTCTACTTTGTCAGCTCATGTGACTGTG...ATGCACTGCAGCTGACTTCTGAGCTCCCTCTAGAACCTCTTCTATCTGTAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | TTGTTACAGATAGAAGAGGTTCTAGAGGGAGCTCAGAAGTCAGCTGCAGTGCATACCACCACAGTCACATaGGCTGACAAAGTAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLQIEEVLEGAQKSAAVHTTTVT*ADKVER Trigger: CCTCTCTACTTTGTCAGCTCATGTGACTGTGGTGGT...ATGCACTGCAGCTGACTTCTGAGCTCCCTCTAGAACCTCTTCTATCTGTAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | TTGTTACAGATAGAAGAGGTTCTAGAGGGAGCTCAGAAGTCAGCTGCAGTGCATCTTGGCTATGCTGCCTaGAGAGTGTTTCCTAACAGT | + |
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Preference number: 4 (lower is better) Translates to: LLQIEEVLEGAQKSAAVHLGYAA*RVFPNS Trigger: ACTGTTAGGAAACACTCTTCAGGCAGCATAGCCAAG...ATGCACTGCAGCTGACTTCTGAGCTCCCTCTAGAACCTCTTCTATCTGTAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | GCTATAATTCAGCTGCAAACACAGCCGTTGCTTTCCATATTCATCATCACCAAAAGTTGGGCCACTGAGTaGATAAGTCCAAGGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: AIIQLQTQPLLSIFIITKSWATE*ISPRTQ Trigger: CTGGGTCCTTGGACTTATTCACTCAGTGGCCCAACT...TTTGGTGATGATGAATATGGAAAGCAACGGCTGTGTTTGCAGCTGAATTATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR GCA 90 bp | GCTATAATTCAGCTGCAAACACAGCCGTTGCTTTCCATATTCATCATCACCAAAAGAGGGCCTTGGCTATaGTGCCTGAAGAGTGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: AIIQLQTQPLLSIFIITKRGPWL*CLKSVS Trigger: GGAAACACTCTTCAGGCAGCATAGCCAAGGCCCTCT...TTTGGTGATGATGAATATGGAAAGCAACGGCTGTGTTTGCAGCTGAATTATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR CCA 90 bp | TTGTTACAGATAGAAGAGGTTCTAGAGGGAGCTCAGAAGTCAGCTGCAGTGCATGGATTCCCCATCTATTaGAGAGTCCCAAGAACACAA | + |
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Preference number: 4 (lower is better) Translates to: LLQIEEVLEGAQKSAAVHGFPIY*RVPRTQ Trigger: TTGTGTTCTTGGGACTCTCCAATAGATGGGGAATCC...ATGCACTGCAGCTGACTTCTGAGCTCCCTCTAGAACCTCTTCTATCTGTAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| 3UTR CAA 72 bp | GTGAAAGGTCTAACTTTCCTGGCATCAGCAAAGTATTaGATTCACAGCAGGGCTGCTTGGTTTAGCAGCCTA | + |
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Preference number: 4 (lower is better) Translates to: VKGLTFLASAKY*IHSRAAWFSSL Trigger: TAGGCTGCTAAACCAAGCAGCCCTGCTGTGAATCAAATACTTTGCTGATGCCAGGAAAGTTAGACCTTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | TTAGGACCTATTAATAGCTATAATTCAGCTGCAAACACAGCCGTTGCTTTCCATAGTTGGGCCACTGAGTaGATAAGTCCAAGGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LGPINSYNSAANTAVAFHSWATE*ISPRTQ Trigger: CTGGGTCCTTGGACTTATTCACTCAGTGGCCCAACT...ATGGAAAGCAACGGCTGTGTTTGCAGCTGAATTATAGCTATTAATAGGTCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | GCTATAATTCAGCTGCAAACACAGCCGTTGCTTTCCATATTCATCATCACCAAAACCACCACAGTCACATaGGCTGACAAAGTAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: AIIQLQTQPLLSIFIITKTTTVT*ADKVER Trigger: CCTCTCTACTTTGTCAGCTCATGTGACTGTGGTGGT...TTTGGTGATGATGAATATGGAAAGCAACGGCTGTGTTTGCAGCTGAATTATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | TTAGGACCTATTAATAGCTATAATTCAGCTGCAAACACAGCCGTTGCTTTCCATCACAGTCACATGAGCTaGCAAAGTAGAGAGGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LGPINSYNSAANTAVAFHHSHMS*QSREGL Trigger: AAGGCCCTCTCTACTTTGTCAGCTCATGTGACTGTG...ATGGAAAGCAACGGCTGTGTTTGCAGCTGAATTATAGCTATTAATAGGTCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR GCA 90 bp | TTGTTACAGATAGAAGAGGTTCTAGAGGGAGCTCAGAAGTCAGCTGCAGTGCATAAAAATCATCTTGGGTaGTGCAATAGAGCAAACTCC | + |
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Preference number: 4 (lower is better) Translates to: LLQIEEVLEGAQKSAAVHKNHLG*CNRANS Trigger: GGAGTTTGCTCTATTGCAGCACCCAAGATGATTTTT...ATGCACTGCAGCTGACTTCTGAGCTCCCTCTAGAACCTCTTCTATCTGTAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | GGGGGATTTTATTTAGGACCTATTAATAGCTATAATTCAGCTGCAAACACAGCCCTTGGCTATGCTGCCTaGAGAGTGTTTCCTAACAGT | + |
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Preference number: 4 (lower is better) Translates to: GGFYLGPINSYNSAANTALGYAA*RVFPNS Trigger: ACTGTTAGGAAACACTCTTCAGGCAGCATAGCCAAG...GGCTGTGTTTGCAGCTGAATTATAGCTATTAATAGGTCCTAAATAAAATCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR TCA 90 bp | GGGGGATTTTATTTAGGACCTATTAATAGCTATAATTCAGCTGCAAACACAGCCTATACAACCTCCAAATaGGATGGCTTTGTGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GGFYLGPINSYNSAANTAYTTSK*DGFVLS Trigger: AGAAAGCACAAAGCCATCTCATTTGGAGGTTGTATA...GGCTGTGTTTGCAGCTGAATTATAGCTATTAATAGGTCCTAAATAAAATCCCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR GCA 90 bp | TTAGGACCTATTAATAGCTATAATTCAGCTGCAAACACAGCCGTTGCTTTCCATAAAAATCATCTTGGGTaGTGCAATAGAGCAAACTCC | + |
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Preference number: 4 (lower is better) Translates to: LGPINSYNSAANTAVAFHKNHLG*CNRANS Trigger: GGAGTTTGCTCTATTGCAGCACCCAAGATGATTTTT...ATGGAAAGCAACGGCTGTGTTTGCAGCTGAATTATAGCTATTAATAGGTCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCTCAGAAGTCAGCTGCAGTGCATGCACGGGTCGCCAAAGTGAGCAGGATATGGGGGAATGCAGGTaGGAGTCAGCAGTCACGGAG | + |
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Preference number: 5 (lower is better) Translates to: GSSEVSCSACTGRQSEQDMGECR*ESAVTE Trigger: CTCCGTGACTGCTGACTCCAACCTGCATTCCCCCAT...ATCCTGCTCACTTTGGCGACCCGTGCATGCACTGCAGCTGACTTCTGAGCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR CAA 90 bp | CTAGCTGCTGGACCCGGGCTAGATCTGAAGAGTTTTGAAAAGTTGTTAAGGGTGATGGGGGAATGCAGGTaGGAGTCAGCAGTCACGGAG | + |
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Preference number: 5 (lower is better) Translates to: LAAGPGLDLKSFEKLLRVMGECR*ESAVTE Trigger: CTCCGTGACTGCTGACTCCAACCTGCATTCCCCCAT...CACCCTTAACAACTTTTCAAAACTCTTCAGATCTAGCCCGGGTCCAGCAGCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR CAA 90 bp | TTGTTACAGATAGAAGAGGTTCTAGAGGGAGCTCAGAAGTCAGCTGCAGTGCATAAAGTAGAGAGGGCCTaGGCTATGCTGCCTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: LLQIEEVLEGAQKSAAVHKVERA*AMLPEE Trigger: CTCTTCAGGCAGCATAGCCAAGGCCCTCTCTACTTT...ATGCACTGCAGCTGACTTCTGAGCTCCCTCTAGAACCTCTTCTATCTGTAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR CAA 90 bp | GCTATAATTCAGCTGCAAACACAGCCGTTGCTTTCCATATTCATCATCACCAAAAAAGTAGAGAGGGCCTaGGCTATGCTGCCTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: AIIQLQTQPLLSIFIITKKVERA*AMLPEE Trigger: CTCTTCAGGCAGCATAGCCAAGGCCCTCTCTACTTT...TTTGGTGATGATGAATATGGAAAGCAACGGCTGTGTTTGCAGCTGAATTATAGC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR CAA 90 bp | GGGGGATTTTATTTAGGACCTATTAATAGCTATAATTCAGCTGCAAACACAGCCGAGATGAGTCCACTGTaGGCTGTGACCATGAACACC | + |
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Preference number: 5 (lower is better) Translates to: GGFYLGPINSYNSAANTAEMSPL*AVTMNT Trigger: GGTGTTCATGGTCACAGCCAACAGTGGACTCATCTC...GGCTGTGTTTGCAGCTGAATTATAGCTATTAATAGGTCCTAAATAAAATCCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR CAA 90 bp | CTAGCTGCTGGACCCGGGCTAGATCTGAAGAGTTTTGAAAAGTTGTTAAGGGTGAAAATGGCAAGAAATTaGTCTAAGTGTGATGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: LAAGPGLDLKSFEKLLRVKMARN*SKCDEG Trigger: CCCTTCATCACACTTAGACAAATTTCTTGCCATTTT...CACCCTTAACAACTTTTCAAAACTCTTCAGATCTAGCCCGGGTCCAGCAGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR CAA 90 bp | GCTATAATTCAGCTGCAAACACAGCCGTTGCTTTCCATATTCATCATCACCAAACCAAATGAGATGGCTTaGTGCTTTCTAAAAAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: AIIQLQTQPLLSIFIITKPNEMA*CFLKRS Trigger: TGACCTTTTTAGAAAGCACAAAGCCATCTCATTTGG...TTTGGTGATGATGAATATGGAAAGCAACGGCTGTGTTTGCAGCTGAATTATAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR CAA 90 bp | TTAGGACCTATTAATAGCTATAATTCAGCTGCAAACACAGCCGTTGCTTTCCATCCAAATGAGATGGCTTaGTGCTTTCTAAAAAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LGPINSYNSAANTAVAFHPNEMA*CFLKRS Trigger: TGACCTTTTTAGAAAGCACAAAGCCATCTCATTTGG...ATGGAAAGCAACGGCTGTGTTTGCAGCTGAATTATAGCTATTAATAGGTCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS-3UTR CAA 90 bp | GGGGGATTTTATTTAGGACCTATTAATAGCTATAATTCAGCTGCAAACACAGCCAAAATGGCAAGAAATTaGTCTAAGTGTGATGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: GGFYLGPINSYNSAANTAKMARN*SKCDEG Trigger: CCCTTCATCACACTTAGACAAATTTCTTGCCATTTT...GGCTGTGTTTGCAGCTGAATTATAGCTATTAATAGGTCCTAAATAAAATCCCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS TCA 72 bp | GGCAAGTCTACAACAAAAGCTAGTTGGGCCACTGAGTaGATAAGTCCAAGGACCCAGGATACTGCCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: GKSTTKASWATE*ISPRTQDTAKI Trigger: AATTTTGGCAGTATCCTGGGTCCTTGGACTTATTCACTCAGTGGCCCAACTAGCTTTTGTTGTAGACTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208536.3 ENSMUST00000213602.2 ENSMUST00000215321.2 |
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| CDS CAA 72 bp | ATGGCTTTGTGCTTTCTAAAAAGGTCAAAAATCATCTaGGGTGCTGCAATAGAGCAAACTCCAAGGTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: MALCFLKRSKII*GAAIEQTPRSR Trigger: TCTTGACCTTGGAGTTTGCTCTATTGCAGCACCCAAGATGATTTTTGACCTTTTTAGAAAGCACAAAGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000208536.3 ENSMUST00000213602.2 ENSMUST00000215321.2 |
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