Pregenerated sensors for OLFR1310 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000108827Ensembl transcript IDs: ENSMUST00000213559.3
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGGACATCAATaGGAAGAGAGGCCCTTGGTCCTGAGAAGGCTTGATATCCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: APAAYVAEDGLVGHQ*EERPLVLRRLDIPV Trigger: TACTGGGATATCAAGCCTTCTCAGGACCAAGGGCCTCTCTTCCCATTGATGTCCAACAAGGCCATCCTCTGCTACATATGCAGCTGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR TCA 90 bp | AGGACAGACAGGCCTTTGGCCATGTCTGTGAGAAACTGTCTTGACTaGTATGAGAAGACTCAGCTCTCTGTAGGCAGCGTTATCCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: RTDRPLAMSVRNCLD*YEKTQLSVGSVIPL Trigger: CAAAGGGATAACGCTGCCTACAGAGAGCTGAGTCTTCTCATATCAGTCAAGACAGTTTCTCACAGACATGGCCAAAGGCCTGTCTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR GCA 90 bp | TCGTCCATCATTAGGAAGAGGCCCCTTGGTCTTGCAAACTTTATATaGCCCAGTACAGGGGAATGCCAGAGCCAAGAAGTGAGAGTGAAT | + |
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Preference number: 1 (lower is better) Translates to: SSIIRKRPLGLANFI*PSTGECQSQEVRVN Trigger: ATTCACTCTCACTTCTTGGCTCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGACCAAGGGGCCTCTTCCTAATGATGGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR GCA 90 bp | TGGTTTGTGACCTGGAAGTATAAGATGAAACAAGCCCTCCCCTCTTaGAAGTGGCTTTTGGTCAGTGGTTATCACAACTGTGGAGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: WFVTWKYKMKQALPS*KWLLVSGYHNCGEL Trigger: AAGCTCTCCACAGTTGTGATAACCACTGACCAAAAGCCACTTGCAAGAGGGGAGGGCTTGTTTCATCTTATACTTCCAGGTCACAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR TCA 90 bp | AAGGACAAGGAAATGGGCTTCGGTCAGGAATCTGACACTGAGCCATaGCAAGGAAATAAGTTCAGGCAGGAATCAAATTTTAGGCTAGAA | + |
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Preference number: 1 (lower is better) Translates to: KDKEMGFGQESDTEP*QGNKFRQESNFRLE Trigger: TTCTAGCCTAAAATTTGATTCCTGCCTGAACTTATTTCCTTGTCATGGCTCAGTGTCAGATTCCTGACCGAAGCCCATTTCCTTGTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR GCA 90 bp | TGTTTATTGCCTTGCTTGTTCCTTGACTACTTGTGTTTATTGTCTTaGTTGTTTCTCAACCTAGAACTGACCTTAATAGTTGCATGTAAA | + |
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Preference number: 1 (lower is better) Translates to: CLLPCLFLDYLCLLS*LFLNLELTLIVACK Trigger: TTTACATGCAACTATTAAGGTCAGTTCTAGGTTGAGAAACAAGCAAGACAATAAACACAAGTAGTCAAGGAACAAGCAAGGCAATAAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR GCA 90 bp | GAAAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGGACATCAGTAGCTGAGACTTGCTaGATATGTAGCAGAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: ENHGSSCICSRGWPCWTSVAETC*ICSRRW Trigger: CCATCTTCTGCTACATATGCAGCAAGTCTCAGCTAC...TGATGTCCAACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CCA 90 bp | GAAAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGGACATCACATGCATGTTCATTCTaGCAGAGTCCAGAACATGTG | + |
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Preference number: 2 (lower is better) Translates to: ENHGSSCICSRGWPCWTSHACSF*QSPEHV Trigger: CACATGTTCTGGACTCTGCCAGAATGAACATGCATG...TGATGTCCAACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR TCA 90 bp | GAAAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGGACATCAGCCTTGCTTGTTCCTTaGCTACTTGTGTTTATTGTC | + |
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Preference number: 2 (lower is better) Translates to: ENHGSSCICSRGWPCWTSALLVP*LLVFIV Trigger: GACAATAAACACAAGTAGTCAAGGAACAAGCAAGGC...TGATGTCCAACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR GCA 90 bp | GTGTTGCTTGCTTTTCTCCACACTTCTCAGGTGTCTTCTCACTTCTTTGTTGTACCCAGTACAGGGGAATaGCAGAGCCAAGAAGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: VLLAFLHTSQVSSHFFVVPSTGE*QSQEVR Trigger: TCTCACTTCTTGGCTCTGGCATTCCCCTGTACTGGG...TACAACAAAGAAGTGAGAAGACACCTGAGAAGTGTGGAGAAAAGCAAGCAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR TCA 90 bp | CATGGTTGTTTTGAGACATCGGCTGGCTGGCACAGAACAATGAAACAAATGAATCTTCAGGCAAGAATCTaGTTTTGGGCTAGGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: HGCFETSAGWHRTMKQMNLQARI*FWARTG Trigger: CCCTGTCCTAGCCCAAAATCAGATTCTTGCCTGAAG...ATTCATTTGTTTCATTGTTCTGTGCCAGCCAGCCGATGTCTCAAAACAACCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR GCA 90 bp | CTTGGTCATCCCAATAAGCCCTTAGAAACAGTGATCACAGGAGTAATCGTGGGACTTGCAAACTTTATATaGCCCAGTACAGGGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: LGHPNKPLETVITGVIVGLANFI*PSTGEC Trigger: GCATTCCCCTGTACTGGGGCATATAAAGTTTGCAAG...TCCCACGATTACTCCTGTGATCACTGTTTCTAAGGGCTTATTGGGATGACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR GCA 90 bp | GTGTTGCTTGCTTTTCTCCACACTTCTCAGGTGTCTTCTCACTTCTTTGTTGTAGAGGCCCCTTGGTCTTaGAAACTTTATATGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VLLAFLHTSQVSSHFFVVEAPWS*KLYMPQ Trigger: CTGGGGCATATAAAGTTTGCAAGACCAAGGGGCCTC...TACAACAAAGAAGTGAGAAGACACCTGAGAAGTGTGGAGAAAAGCAAGCAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGCTTGCTTTTCTCCACACTTCTCAGGTGTCTTCTCACTTCTTTGTTGTATGTAAGAAGGAGACCTaGACAGGAGCCAGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VLLAFLHTSQVSSHFFVVCKKET*TGARER Trigger: TCTCTCTCTGGCTCCTGTCCAGGTCTCCTTCTTACA...TACAACAAAGAAGTGAGAAGACACCTGAGAAGTGTGGAGAAAAGCAAGCAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGTAGGCTTCAGGCAAGAATCTGATTTTGGGCTAGGACAGGGATCTTGGTCAAGAGTCCAGAACATGTaGTTGGAGTCATTTTATCTG | + |
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Preference number: 2 (lower is better) Translates to: EVGFRQESDFGLGQGSWSRVQNM*LESFYL Trigger: CAGATAAAATGACTCCAATCACATGTTCTGGACTCT...TGACCAAGATCCCTGTCCTAGCCCAAAATCAGATTCTTGCCTGAAGCCTACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CAA 90 bp | CCCTTAGAAACAGTGATCACAGGAGTAATCGTGGGACTCTGTTTATaGCCTTGCTTGTTCCTTGACTACTTGTGTTTATTGTCTTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PLETVITGVIVGLCL*PCLFLDYLCLLSCL Trigger: CAAGCAAGACAATAAACACAAGTAGTCAAGGAACAAGCAAGGCAATAAACAGAGTCCCACGATTACTCCTGTGATCACTGTTTCTAAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR TCA 90 bp | GAAATTACATCACAGAAGGGTGAAAGGGCAAATTTCTTTGTATTGTCCTTGATCGGTCCTGAGAAGGCTTaGTATCCCAGTATAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: EITSQKGERANFFVLSLIGPEKA*YPSIGE Trigger: TTCCCCTATACTGGGATATCAAGCCTTCTCAGGACC...GATCAAGGACAATACAAAGAAATTTGCCCTTTCACCCTTCTGTGATGTAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGCTTGCTTTTCTCCACACTTCTCAGGTGTCTTCTCACTTCTTTGTTGTACTTGCAAGTGGCTTTTaGTCAGTGGTTATCACAACT | + |
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Preference number: 2 (lower is better) Translates to: VLLAFLHTSQVSSHFFVVLASGF*SVVITT Trigger: AGTTGTGATAACCACTGACCAAAAGCCACTTGCAAG...TACAACAAAGAAGTGAGAAGACACCTGAGAAGTGTGGAGAAAAGCAAGCAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR TCA 90 bp | CATGGTTGTTTTGAGACATCGGCTGGCTGGCACAGAACAATGAAACAAATGAATAGAGTAGTAGCCTCATaGAATATGATTTGTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: HGCFETSAGWHRTMKQMNRVVAS*NMICVL Trigger: GAGCACACAAATCATATTTCATGAGGCTACTACTCT...ATTCATTTGTTTCATTGTTCTGTGCCAGCCAGCCGATGTCTCAAAACAACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR TCA 90 bp | TTAACCTATAAGTCTCATGGTTGTTTTGAGACATCGGCTGGCTGGCACAGAACATTTTCAGAGGTGAAATaGGGAAAGGGGATAACATTT | + |
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Preference number: 2 (lower is better) Translates to: LTYKSHGCFETSAGWHRTFSEVK*GKGITF Trigger: AAATGTTATCCCCTTTCCTCATTTCACCTCTGAAAA...TGTTCTGTGCCAGCCAGCCGATGTCTCAAAACAACCATGAGACTTATAGGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CCA 90 bp | TTAACCTATAAGTCTCATGGTTGTTTTGAGACATCGGCTGGCTGGCACAGAACAGAAATTGGTGAGGGATaGCATACACAAACTTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: LTYKSHGCFETSAGWHRTEIGEG*HTQTLV Trigger: AACTAAAGTTTGTGTATGCCATCCCTCACCAATTTC...TGTTCTGTGCCAGCCAGCCGATGTCTCAAAACAACCATGAGACTTATAGGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CCA 90 bp | GAAATTACATCACAGAAGGGTGAAAGGGCAAATTTCTTTGTATTGTCCTTGATCGCTTTAGGGGTTGCTTaGCAGGAATCTGACATTAGC | + |
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Preference number: 2 (lower is better) Translates to: EITSQKGERANFFVLSLIALGVA*QESDIS Trigger: GCTAATGTCAGATTCCTGCCAAGCAACCCCTAAAGC...GATCAAGGACAATACAAAGAAATTTGCCCTTTCACCCTTCTGTGATGTAATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CAA 90 bp | GTAATCGTGGGACTCTGTTTATTGCCTTGCTTGTTCCTTGACTACTaGTGTTTATTGTCTTGCTTGTTTCTCAACCTAGAACTGACCTTA | + |
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Preference number: 2 (lower is better) Translates to: VIVGLCLLPCLFLDY*CLLSCLFLNLELTL Trigger: TAAGGTCAGTTCTAGGTTGAGAAACAAGCAAGACAATAAACACAAGTAGTCAAGGAACAAGCAAGGCAATAAACAGAGTCCCACGATTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CCA 90 bp | TGGTTTACTTCTTATGGGTGTGTTGCTTGCTTTTCTCCACACTTCTCAGGTGTCGCTAGGAACCAAACTTaGTCTTCTGTAAAAATACAA | + |
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Preference number: 2 (lower is better) Translates to: WFTSYGCVACFSPHFSGVARNQT*SSVKIQ Trigger: TTGTATTTTTACAGAAGACCAAGTTTGGTTCCTAGC...GACACCTGAGAAGTGTGGAGAAAAGCAAGCAACACACCCATAAGAAGTAAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CAA 90 bp | GGACTCTGTTTATTGCCTTGCTTGTTCCTTGACTACTTGTGTTTATaGTCTTGCTTGTTTCTCAACCTAGAACTGACCTTAATAGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: GLCLLPCLFLDYLCL*SCLFLNLELTLIVA Trigger: TGCAACTATTAAGGTCAGTTCTAGGTTGAGAAACAAGCAAGACAATAAACACAAGTAGTCAAGGAACAAGCAAGGCAATAAACAGAGTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGTCATTTTATCTGGAATTACAGATAGTTGTGAGCCTCATGTGGGTGCTAAGTGTTCTAAATCACTaGGCCATCTTTATATCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LESFYLELQIVVSLMWVLSVLNH*AIFISH Trigger: ATGGGATATAAAGATGGCTCAGTGATTTAGAACACT...TAGCACCCACATGAGGCTCACAACTATCTGTAATTCCAGATAAAATGACTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CAA 90 bp | AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAATTTGGAAATaGGCTAGGACAGACAGGCCTTTGGCCATGTCTGTGAGAAACTGT | + |
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Preference number: 2 (lower is better) Translates to: RKKERKKERKKEIWK*ARTDRPLAMSVRNC Trigger: ACAGTTTCTCACAGACATGGCCAAAGGCCTGTCTGTCCTAGCCAATTTCCAAATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR TCA 90 bp | GAAATTACATCACAGAAGGGTGAAAGGGCAAATTTCTTTGTATTGTCCTTGATCCTACCTAAGGAAATGTaGTCTGGAATGATAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: EITSQKGERANFFVLSLILPKEM*SGMISE Trigger: CTCACTTATCATTCCAGATCACATTTCCTTAGGTAG...GATCAAGGACAATACAAAGAAATTTGCCCTTTCACCCTTCTGTGATGTAATTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CAA 90 bp | CATTATTTCTTCATAAAATCTACTGGTTTACTTCTTATGGGTGTGTaGCTTGCTTTTCTCCACACTTCTCAGGTGTCTTCTCACTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: HYFFIKSTGLLLMGV*LAFLHTSQVSSHFF Trigger: AAAGAAGTGAGAAGACACCTGAGAAGTGTGGAGAAAAGCAAGCAACACACCCATAAGAAGTAAACCAGTAGATTTTATGAAGAAATAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CCA 72 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTaGACATCAATGGGAAGAGAGGCCCTTGGTCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: GSSCICSRGWPC*TSMGREALGPE Trigger: CTCAGGACCAAGGGCCTCTCTTCCCATTGATGTCCAACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | GAGAAGACTCAGCTCTCTGTAGGCAGCGTTATCCCTTTGCAGATGGTCCTGGGTGCTAGGACAGGGATCTaGGTCATCCCAATAAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: EKTQLSVGSVIPLQMVLGARTGI*VIPISP Trigger: AGGGCTTATTGGGATGACCAAGATCCCTGTCCTAGC...ACCCAGGACCATCTGCAAAGGGATAACGCTGCCTACAGAGAGCTGAGTCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR TCA 72 bp | TCAATGGGAAGAGAGGCCCTTGGTCCTGAGAAGGCTTaGTATCCCAGTATAGGGGAATACCAGGACAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: SMGREALGPEKA*YPSIGEYQDRE Trigger: TTCCCTGTCCTGGTATTCCCCTATACTGGGATATCAAGCCTTCTCAGGACCAAGGGCCTCTCTTCCCATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CCA 72 bp | GCATATGTAGCAGAGGATGGCCTTGTTGGACATCAATaGGAAGAGAGGCCCTTGGTCCTGAGAAGGCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: AYVAEDGLVGHQ*EERPLVLRRLD Trigger: ATCAAGCCTTCTCAGGACCAAGGGCCTCTCTTCCCATTGATGTCCAACAAGGCCATCCTCTGCTACATATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR GCA 72 bp | AAAGAGTTGAGGGATGGGGAAAACCATGGCTCCAGCTaGATATGTAGCAGAGGATGGCCTTGTTGGACATCA | + |
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Preference number: 3 (lower is better) Translates to: KELRDGENHGSS*ICSRGWPCWTS Trigger: TGATGTCCAACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGTTTTCCCCATCCCTCAACTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | TTAACCTATAAGTCTCATGGTTGTTTTGAGACATCGGCTGGCTGGCACAGAACATGGGAAGAGAGGCCCTaGGTCCTGAGAAGGCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: LTYKSHGCFETSAGWHRTWEERP*VLRRLD Trigger: ATCAAGCCTTCTCAGGACCAAGGGCCTCTCTTCCCA...TGTTCTGTGCCAGCCAGCCGATGTCTCAAAACAACCATGAGACTTATAGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR TCA 72 bp | AGGCCTTTGGCCATGTCTGTGAGAAACTGTCTTGACTaGTATGAGAAGACTCAGCTCTCTGTAGGCAGCGTT | + |
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Preference number: 3 (lower is better) Translates to: RPLAMSVRNCLD*YEKTQLSVGSV Trigger: AACGCTGCCTACAGAGAGCTGAGTCTTCTCATATCAGTCAAGACAGTTTCTCACAGACATGGCCAAAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR TCA 72 bp | TTGTTGGACATCAATGGGAAGAGAGGCCCTTGGTCCTaGGAAGGCTTGATATCCCAGTATAGGGGAATACCA | + |
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Preference number: 3 (lower is better) Translates to: LLDINGKRGPWS*EGLISQYRGIP Trigger: TGGTATTCCCCTATACTGGGATATCAAGCCTTCTCAGGACCAAGGGCCTCTCTTCCCATTGATGTCCAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CCA 72 bp | TTGCAAGTGGCTTTTGGTCAGTGGTTATCACAACTGTaGAGAGCTTTAGGGGTTGCTTGGCAGGAATCTGAC | + |
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Preference number: 3 (lower is better) Translates to: LQVAFGQWLSQL*RALGVAWQESD Trigger: GTCAGATTCCTGCCAAGCAACCCCTAAAGCTCTCCACAGTTGTGATAACCACTGACCAAAAGCCACTTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGTAGGCTTCAGGCAAGAATCTGATTTTGGGCTAGGACAGGGATCTTGGTCACTCTATGAAAGGAAATaGGTGAGGGATGGCATACAC | + |
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Preference number: 3 (lower is better) Translates to: EVGFRQESDFGLGQGSWSLYERK*VRDGIH Trigger: GTGTATGCCATCCCTCACCAATTTCCTTTCATAGAG...TGACCAAGATCCCTGTCCTAGCCCAAAATCAGATTCTTGCCTGAAGCCTACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | TGGTTTACTTCTTATGGGTGTGTTGCTTGCTTTTCTCCACACTTCTCAGGTGTCAGAGGCCCCTTGGTCTaGCAAACTTTATATGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: WFTSYGCVACFSPHFSGVRGPLV*QTLYAP Trigger: TGGGGCATATAAAGTTTGCAAGACCAAGGGGCCTCT...GACACCTGAGAAGTGTGGAGAAAAGCAAGCAACACACCCATAAGAAGTAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGTAGGCTTCAGGCAAGAATCTGATTTTGGGCTAGGACAGGGATCTTGGTCATTAGGAAGAGGCCCCTaGGTCTTGCAAACTTTATAT | + |
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Preference number: 3 (lower is better) Translates to: EVGFRQESDFGLGQGSWSLGRGP*VLQTLY Trigger: ATATAAAGTTTGCAAGACCAAGGGGCCTCTTCCTAA...TGACCAAGATCCCTGTCCTAGCCCAAAATCAGATTCTTGCCTGAAGCCTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGTAGGCTTCAGGCAAGAATCTGATTTTGGGCTAGGACAGGGATCTTGGTCAACACAGATTCAGTGTTaGGACTGTCTGTGTGTTACT | + |
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Preference number: 3 (lower is better) Translates to: EVGFRQESDFGLGQGSWSTQIQC*DCLCVT Trigger: AGTAACACACAGACAGTCCAAACACTGAATCTGTGT...TGACCAAGATCCCTGTCCTAGCCCAAAATCAGATTCTTGCCTGAAGCCTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | CATGGTTGTTTTGAGACATCGGCTGGCTGGCACAGAACAATGAAACAAATGAATCAGAGGATGGCCTTGTaGGACATCAATGGGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: HGCFETSAGWHRTMKQMNQRMAL*DINGKR Trigger: TCTCTTCCCATTGATGTCCAACAAGGCCATCCTCTG...ATTCATTTGTTTCATTGTTCTGTGCCAGCCAGCCGATGTCTCAAAACAACCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR GCA 72 bp | ACCTGGAAGTATAAGATGAAACAAGCCCTCCCCTCTTaGAAGTGGCTTTTGGTCAGTGGTTATCACAACTGT | + |
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Preference number: 3 (lower is better) Translates to: TWKYKMKQALPS*KWLLVSGYHNC Trigger: ACAGTTGTGATAACCACTGACCAAAAGCCACTTGCAAGAGGGGAGGGCTTGTTTCATCTTATACTTCCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR GCA 72 bp | AAACTAACCAGCACATGTAGTTATTGTGCGTACTGCTaGAGTATACCTGATGGGAAGGCATACATGATGGGG | + |
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Preference number: 3 (lower is better) Translates to: KLTSTCSYCAYC*SIPDGKAYMMG Trigger: CCCCATCATGTATGCCTTCCCATCAGGTATACTGCAGCAGTACGCACAATAACTACATGTGCTGGTTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | GGCAGGAATCTGACATTAGCCAAGGACAAGGAAATGGGCTTCGGTCAGGAATCTGACTACTTGTGTTTATaGTCTTGCTTGTTTCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: GRNLTLAKDKEMGFGQESDYLCL*SCLFLN Trigger: GTTGAGAAACAAGCAAGACAATAAACACAAGTAGTC...AGATTCCTGACCGAAGCCCATTTCCTTGTCCTTGGCTAATGTCAGATTCCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | GTGTTGCTTGCTTTTCTCCACACTTCTCAGGTGTCTTCTCACTTCTTTGTTGTATCACCAACCAAAGAGTaGAGGGATGGGGAAAACCAT | + |
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Preference number: 3 (lower is better) Translates to: VLLAFLHTSQVSSHFFVVSPTKE*RDGENH Trigger: ATGGTTTTCCCCATCCCTCAACTCTTTGGTTGGTGA...TACAACAAAGAAGTGAGAAGACACCTGAGAAGTGTGGAGAAAAGCAAGCAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR GCA 72 bp | GAGCAAACTCTTAAGATTCTAGTAGCTGAGACTTGCTaGATATGTAGCAGAAGATGGCCTAGTCGTCCATCA | + |
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Preference number: 3 (lower is better) Translates to: EQTLKILVAETC*ICSRRWPSRPS Trigger: TGATGGACGACTAGGCCATCTTCTGCTACATATGCAGCAAGTCTCAGCTACTAGAATCTTAAGAGTTTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR GCA 72 bp | CAAAAACTAACCAGCACATGTAGTTATTGTGCGTACTaGTGCAGTATACCTGATGGGAAGGCATACATGATG | + |
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Preference number: 3 (lower is better) Translates to: QKLTSTCSYCAY*CSIPDGKAYMM Trigger: CATCATGTATGCCTTCCCATCAGGTATACTGCAGCAGTACGCACAATAACTACATGTGCTGGTTAGTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | TTAACCTATAAGTCTCATGGTTGTTTTGAGACATCGGCTGGCTGGCACAGAACATGCCTTGCTTGTTCCTaGACTACTTGTGTTTATTGT | + |
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Preference number: 3 (lower is better) Translates to: LTYKSHGCFETSAGWHRTCLACS*TTCVYC Trigger: ACAATAAACACAAGTAGTCAAGGAACAAGCAAGGCA...TGTTCTGTGCCAGCCAGCCGATGTCTCAAAACAACCATGAGACTTATAGGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | GAAATTACATCACAGAAGGGTGAAAGGGCAAATTTCTTTGTATTGTCCTTGATCGTGGGACTCTGTTTATaGCCTTGCTTGTTCCTTGAC | + |
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Preference number: 3 (lower is better) Translates to: EITSQKGERANFFVLSLIVGLCL*PCLFLD Trigger: GTCAAGGAACAAGCAAGGCAATAAACAGAGTCCCAC...GATCAAGGACAATACAAAGAAATTTGCCCTTTCACCCTTCTGTGATGTAATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR-3UTR CAA 90 bp | GTGTTGCTTGCTTTTCTCCACACTTCTCAGGTGTCTTCTCACTTCTTTGTTGTAGCTCTGTTTCTCTCTTaGGATGAAAGGTCGATTTTT | + |
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Preference number: 3 (lower is better) Translates to: VLLAFLHTSQVSSHFFVVALFLS*DERSIF Trigger: AAAAATCGACCTTTCATCCAAAGAGAGAAACAGAGC...TACAACAAAGAAGTGAGAAGACACCTGAGAAGTGTGGAGAAAAGCAAGCAACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR TCA 72 bp | AATCGTGGGACTCTGTTTATTGCCTTGCTTGTTCCTTaGCTACTTGTGTTTATTGTCTTGCTTGTTTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: NRGTLFIALLVP*LLVFIVLLVSQ Trigger: TTGAGAAACAAGCAAGACAATAAACACAAGTAGTCAAGGAACAAGCAAGGCAATAAACAGAGTCCCACGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR TCA 72 bp | TACATGCATGTTCATTCTGGCAGAGTCCAGAACATGTaGTTGGAGTCATTTTATCTGGAATTACAGATAGTT | + |
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Preference number: 3 (lower is better) Translates to: YMHVHSGRVQNM*LESFYLELQIV Trigger: AACTATCTGTAATTCCAGATAAAATGACTCCAATCACATGTTCTGGACTCTGCCAGAATGAACATGCATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR TCA 72 bp | AAACAGTTAGATAACACCAGACTACCTAAGGAAATGTaGTCTGGAATGATAAGTGAGAGCCAAATCTGTCAA | + |
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Preference number: 3 (lower is better) Translates to: KQLDNTRLPKEM*SGMISESQICQ Trigger: TTGACAGATTTGGCTCTCACTTATCATTCCAGATCACATTTCCTTAGGTAGTCTGGTGTTATCTAACTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CCA 72 bp | AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAATTTaGAAATTGGCTAGGACAGACAGGCCTTTGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: KKERKKERKKEI*KLARTDRPLAM Trigger: CATGGCCAAAGGCCTGTCTGTCCTAGCCAATTTCCAAATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR TCA 72 bp | AAGTCTCTTATGAAGTCCTCTATGAAAGGAAATTGGTaGGGGATGGCATACACAAACTTTAGTTTTCTAGTA | + |
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Preference number: 3 (lower is better) Translates to: KSLMKSSMKGNW*GMAYTNFSFLV Trigger: TACTAGAAAACTAAAGTTTGTGTATGCCATCCCTCACCAATTTCCTTTCATAGAGGACTTCATAAGAGACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CCA 72 bp | TCACTATTGTGTTTTCTGAATGAGAGCCATTATGACTaGGGAGGGATGGAATCTCATTATAGTGTTAATTTT | + |
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Preference number: 3 (lower is better) Translates to: SLLCFLNESHYD*GGMESHYSVNF Trigger: AAAATTAACACTATAATGAGATTCCATCCCTCCCCAGTCATAATGGCTCTCATTCAGAAAACACAATAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CAA 72 bp | TGTAGGCAGCGTTATCCCTTTGCAGATGGTCCTGGGTaGTGTAAGAAGGAGACCTGGACAGGAGCCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: CRQRYPFADGPG*CKKETWTGARE Trigger: CTCTCTGGCTCCTGTCCAGGTCTCCTTCTTACACAACCCAGGACCATCTGCAAAGGGATAACGCTGCCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CAA 72 bp | GAGAAGACTCAGCTCTCTGTAGGCAGCGTTATCCCTTaGCAGATGGTCCTGGGTTGTGTAAGAAGGAGACCT | + |
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Preference number: 4 (lower is better) Translates to: EKTQLSVGSVIP*QMVLGCVRRRP Trigger: AGGTCTCCTTCTTACACAACCCAGGACCATCTGCAAAGGGATAACGCTGCCTACAGAGAGCTGAGTCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| CDS-3UTR TCA 90 bp | GAAAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGGACATCACACAATGACATGAGCTaGCAAAGTGGAGAGGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ENHGSSCICSRGWPCWTSHNDMS*QSGEGL Trigger: AAGGCCCTCTCCACTTTGTCAGCTCATGTCATTGTG...TGATGTCCAACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| CDS-3UTR CCA 90 bp | CTTGGTCATCCCAATAAGCCCTTAGAAACAGTGATCACAGGAGTAATCGTGGGAGGATTGCCCATGAGTTaGAGAGTCCCAGGAACACAA | + |
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Preference number: 4 (lower is better) Translates to: LGHPNKPLETVITGVIVGGLPMS*RVPGTQ Trigger: TTGTGTTCCTGGGACTCTCCAACTCATGGGCAATCC...TCCCACGATTACTCCTGTGATCACTGTTTCTAAGGGCTTATTGGGATGACCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| CDS-3UTR CCA 90 bp | TTAACCTATAAGTCTCATGGTTGTTTTGAGACATCGGCTGGCTGGCACAGAACACATGAGCTGACAAAGTaGAGAGGGCCTTACCTAAAC | + |
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Preference number: 4 (lower is better) Translates to: LTYKSHGCFETSAGWHRTHELTK*RGPYLN Trigger: GTTTAGGTAAGGCCCTCTCCACTTTGTCAGCTCATG...TGTTCTGTGCCAGCCAGCCGATGTCTCAAAACAACCATGAGACTTATAGGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| CDS-3UTR TCA 90 bp | TGGTTTACTTCTTATGGGTGTGTTGCTTGCTTTTCTCCACACTTCTCAGGTGTCACTCAGCTGAGTCACTaGGTGGATGAAGCCAATAAT | + |
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Preference number: 4 (lower is better) Translates to: WFTSYGCVACFSPHFSGVTQLSH*VDEANN Trigger: ATTATTGGCTTCATCCACTCAGTGACTCAGCTGAGT...GACACCTGAGAAGTGTGGAGAAAAGCAAGCAACACACCCATAAGAAGTAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CAA 72 bp | ACAGGAGTAATCGTGGGACTCTGTTTATTGCCTTGCTaGTTCCTTGACTACTTGTGTTTATTGTCTTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TGVIVGLCLLPC*FLDYLCLLSCL Trigger: CAAGCAAGACAATAAACACAAGTAGTCAAGGAACAAGCAAGGCAATAAACAGAGTCCCACGATTACTCCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CAA 72 bp | TTCATAAAATCTACTGGTTTACTTCTTATGGGTGTGTaGCTTGCTTTTCTCCACACTTCTCAGGTGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FIKSTGLLLMGV*LAFLHTSQVSS Trigger: AGAAGACACCTGAGAAGTGTGGAGAAAAGCAAGCAACACACCCATAAGAAGTAAACCAGTAGATTTTATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CAA 72 bp | TTATTGCCTTGCTTGTTCCTTGACTACTTGTGTTTATaGTCTTGCTTGTTTCTCAACCTAGAACTGACCTTA | + |
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Preference number: 4 (lower is better) Translates to: LLPCLFLDYLCL*SCLFLNLELTL Trigger: TAAGGTCAGTTCTAGGTTGAGAAACAAGCAAGACAATAAACACAAGTAGTCAAGGAACAAGCAAGGCAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| 3UTR CAA 72 bp | TTCTCAGGTGTCTTCTCACTTCTTTGTTGTAAAGTTTaGCTCTGTTTCTCTCTTTGGATGAAAGGTCGATTT | + |
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Preference number: 4 (lower is better) Translates to: FSGVFSLLCCKV*LCFSLWMKGRF Trigger: AAATCGACCTTTCATCCAAAGAGAGAAACAGAGCAAAACTTTACAACAAAGAAGTGAGAAGACACCTGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| CDS-3UTR CAA 90 bp | GAGAAGACTCAGCTCTCTGTAGGCAGCGTTATCCCTTTGCAGATGGTCCTGGGTTGGATTGCCCATGAGTaGGAGAGTCCCAGGAACACA | + |
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Preference number: 5 (lower is better) Translates to: EKTQLSVGSVIPLQMVLGWIAHE*ESPRNT Trigger: TGTGTTCCTGGGACTCTCCAACTCATGGGCAATCCA...ACCCAGGACCATCTGCAAAGGGATAACGCTGCCTACAGAGAGCTGAGTCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| CDS-3UTR CAA 90 bp | TTGGAGTCATTTTATCTGGAATTACAGATAGTTGTGAGCCTCATGTGGGTGCTAGGTCATAAATCATCTTaGGTGTTGTGGAGGAACAAA | + |
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Preference number: 5 (lower is better) Translates to: LESFYLELQIVVSLMWVLGHKSS*VLWRNK Trigger: TTTGTTCCTCCACAACACCAAAGATGATTTATGACC...TAGCACCCACATGAGGCTCACAACTATCTGTAATTCCAGATAAAATGACTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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| CDS-3UTR CAA 90 bp | TTGGAGTCATTTTATCTGGAATTACAGATAGTTGTGAGCCTCATGTGGGTGCTAAATCAAAATACACTTTaGTGGGCTCATGATGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: LESFYLELQIVVSLMWVLNQNTL*WAHDGQ Trigger: CTGACCATCATGAGCCCACAAAAGTGTATTTTGATT...TAGCACCCACATGAGGCTCACAACTATCTGTAATTCCAGATAAAATGACTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213559.3 |
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