Pregenerated sensors for OLFR1308 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074952Ensembl transcript IDs: ENSMUST00000207560.3
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTTCCTTTGACAGCTTCAGAGTTTTATGTCCATTTTAGCACTTTCTGTTCTCTTTGGGGCACTTGCATTTaGATGTACTCATGTAACATA | + |
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Preference number: 2 (lower is better) Translates to: FPLTASEFYVHFSTFCSLWGTCI*MYSCNI Trigger: TATGTTACATGAGTACATGCAAATGCAAGTGCCCCA...AAGAGAACAGAAAGTGCTAAAATGGACATAAAACTCTGAAGCTGTCAAAGGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTTTAGCTAATAATCCAATTGCTACATTGAATAATGGCACAGAGAGTATGCCAACGAATAATCTTTaGGATTTCTTGAAGTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TALANNPIATLNNGTESMPTNNL*DFLKSA Trigger: AGCAGACTTCAAGAAATCTCAAAGATTATTCGTTGG...CATACTCTCTGTGCCATTATTCAATGTAGCAATTGGATTATTAGCTAAAGCAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| 3UTR-3UTR CAA 90 bp | ACTGCTTTAGCTAATAATCCAATTGCTACATTGAATAATGGCACAGAGAGTATGCTGCTGACAAGTATTTaGGGGCACTTGCATTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: TALANNPIATLNNGTESMLLTSI*GHLHLH Trigger: ATGCAAATGCAAGTGCCCCAAAATACTTGTCAGCAG...CATACTCTCTGTGCCATTATTCAATGTAGCAATTGGATTATTAGCTAAAGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| 3UTR-3UTR CAA 90 bp | ACTGCTTTAGCTAATAATCCAATTGCTACATTGAATAATGGCACAGAGAGTATGCCATTTAGCTTAATGTaGGCTATAGATTTACGGAGC | + |
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Preference number: 3 (lower is better) Translates to: TALANNPIATLNNGTESMPFSLM*AIDLRS Trigger: GCTCCGTAAATCTATAGCCAACATTAAGCTAAATGG...CATACTCTCTGTGCCATTATTCAATGTAGCAATTGGATTATTAGCTAAAGCAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTTTGACAGCTTCAGAGTTTTATGTCCATTTTAGCACTTTCTGTTCTCTTCGGAGCACATTTATATaGAGAAATCTTCCTTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: FPLTASEFYVHFSTFCSLRSTFI*RNLPSN Trigger: GTTAGAAGGAAGATTTCTCAATATAAATGTGCTCCG...AAGAGAACAGAAAGTGCTAAAATGGACATAAAACTCTGAAGCTGTCAAAGGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTTTGACAGCTTCAGAGTTTTATGTCCATTTTAGCACTTTCTGTTCTCTTAATCCAATTGCTACATaGAATAATGGCACAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FPLTASEFYVHFSTFCSLNPIAT*NNGTES Trigger: ACTCTCTGTGCCATTATTCAATGTAGCAATTGGATT...AAGAGAACAGAAAGTGCTAAAATGGACATAAAACTCTGAAGCTGTCAAAGGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| CDS-3UTR TCA 90 bp | TTGAAGTCTGCTGACAAGTATTTTGGGGCACTTGCATTTGCATGTACTCATGTAATTGGAGAGTGTAAATaGGGGTCAGATGCCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: LKSADKYFGALAFACTHVIGECK*GSDATV Trigger: CACTGTGGCATCTGACCCTCATTTACACTCTCCAAT...TACATGAGTACATGCAAATGCAAGTGCCCCAAAATACTTGTCAGCAGACTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| CDS-3UTR TCA 90 bp | TTGAAGTCTGCTGACAAGTATTTTGGGGCACTTGCATTTGCATGTACTCATGTAACTACAAAAGCCAGTTaGACCAGAGAATGCATAAAG | + |
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Preference number: 4 (lower is better) Translates to: LKSADKYFGALAFACTHVTTKAS*TRECIK Trigger: CTTTATGCATTCTCTGGTTCAACTGGCTTTTGTAGT...TACATGAGTACATGCAAATGCAAGTGCCCCAAAATACTTGTCAGCAGACTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| CDS-3UTR TCA 90 bp | AATGCTCCTATACCTGAAGACCTTAAAATATTCCCTCTTCTATGTCTAAGAGCTCAGGAACACAAACTCTaGCACCATAGACTGATTCAT | + |
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Preference number: 4 (lower is better) Translates to: NAPIPEDLKIFPLLCLRAQEHKL*HHRLIH Trigger: ATGAATCAGTCTATGGTGTCAGAGTTTGTGTTCCTG...AGCTCTTAGACATAGAAGAGGGAATATTTTAAGGTCTTCAGGTATAGGAGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| CDS-3UTR TCA 90 bp | AATGCTCCTATACCTGAAGACCTTAAAATATTCCCTCTTCTATGTCTAAGAGCTAAGGCCATGTATAGATaGACATCACAGGACCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: NAPIPEDLKIFPLLCLRAKAMYR*TSQDQR Trigger: TCTTTGGTCCTGTGATGTTCATCTATACATGGCCTT...AGCTCTTAGACATAGAAGAGGGAATATTTTAAGGTCTTCAGGTATAGGAGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| CDS-3UTR TCA 90 bp | ACTGCTTTAGCTAATAATCCAATTGCTACATTGAATAATGGCACAGAGAGTATGCACCATAACATGAGCTaGAAGTGTAGACAAAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TALANNPIATLNNGTESMHHNMS*KCRQSL Trigger: AAGGCTTTGTCTACACTTTCAGCTCATGTTATGGTG...CATACTCTCTGTGCCATTATTCAATGTAGCAATTGGATTATTAGCTAAAGCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| CDS-3UTR GCA 90 bp | AATGCTCCTATACCTGAAGACCTTAAAATATTCCCTCTTCTATGTCTAAGAGCTGAGAGTTTCCTGTCATaGTTGCTACATAAAACATGG | + |
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Preference number: 4 (lower is better) Translates to: NAPIPEDLKIFPLLCLRAESFLS*LLHKTW Trigger: CCATGTTTTATGTAGCAAGCATGACAGGAAACTCTC...AGCTCTTAGACATAGAAGAGGGAATATTTTAAGGTCTTCAGGTATAGGAGCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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| CDS-3UTR GCA 90 bp | ACTGCTTTAGCTAATAATCCAATTGCTACATTGAATAATGGCACAGAGAGTATGGTTTCCTGTCATGCTTaGTACATAAAACATGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TALANNPIATLNNGTESMVSCHA*YIKHGR Trigger: TCTTCCATGTTTTATGTAGCAAGCATGACAGGAAAC...CATACTCTCTGTGCCATTATTCAATGTAGCAATTGGATTATTAGCTAAAGCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207560.3 |
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