RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1307 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094747

Ensembl transcript IDs: ENSMUST00000099604.6, ENSMUST00000099606.2

Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGCAGAAAACTCGGCCTGGCCAGGGCCACAAATCCCTTCCAGTCTaGAGCAGCACTGGGTCACCTTGGGCACAGAGTCAGCAGACTCCT +
Preference number: 1 (lower is better)
Translates to: KQKTRPGQGHKSLPV*SSTGSPWAQSQQTP
Trigger: AGGAGTCTGCTGACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGCCCTGGCCAGGCCGAGTTTTCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp TGGCCTGACCAGGGTCAAAAGTCCCTTTCAGTTGGCACCAGCACCTaGTCACCTGGTCACCTGGTCACCTGGGCATGGAGTCTGCAGACA +
Preference number: 1 (lower is better)
Translates to: WPDQGQKSLSVGTST*SPGHLVTWAWSLQT
Trigger: TGTCTGCAGACTCCATGCCCAGGTGACCAGGTGACCAGGTGACCAGGTGCTGGTGCCAACTGAAAGGGACTTTTGACCCTGGTCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 90 bp GCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTaGGGCAGACCCCATTTCGGGCTCCAGACATCCAGGCACCTTCCC +
Preference number: 1 (lower is better)
Translates to: AWSLQTPAMSLENSF*GRPHFGLQTSRHLP
Trigger: GGGAAGGTGCCTGGATGTCTGGAGCCCGAAATGGGGTCTGCCTCAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp GTCACCTGGTCACCTGGTCACCTGGGCATGGAGTCTGCAGACACCTaGAATGTCCCTAGAGAACAGCTTCTGAGGCAGACCCCATTTCGG +
Preference number: 1 (lower is better)
Translates to: VTWSPGHLGMESADT*NVPREQLLRQTPFR
Trigger: CCGAAATGGGGTCTGCCTCAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTGACCAGGTGACCAGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp GCCCTCGCCCCACTCCCATACCCACCCACTCCCACTTCTTGGTCCTaGTGTTCCCCTGTACTGAGGCATATAAAGTGTGCAAGACCAATG +
Preference number: 1 (lower is better)
Translates to: ALAPLPYPPTPTSWS*CSPVLRHIKCARPM
Trigger: CATTGGTCTTGCACACTTTATATGCCTCAGTACAGGGGAACACCAGGACCAAGAAGTGGGAGTGGGTGGGTATGGGAGTGGGGCGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp GTCTCTGCTGAGGCTGTACCGGGACCTAGCAAACACAGAAGTGGATaGTTACAGTCAGCTATTGTCTGGATCACAGGGCCCCCAGTGGAG +
Preference number: 1 (lower is better)
Translates to: VSAEAVPGPSKHRSG*LQSAIVWITGPPVE
Trigger: CTCCACTGGGGGCCCTGTGATCCAGACAATAGCTGACTGTAAGCATCCACTTCTGTGTTTGCTAGGTCCCGGTACAGCCTCAGCAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp TACAGTCTCCACTCTGGCAACCTGTGCCCCTCTTGCCTCCCTCCCTaGATGTTGGGGGACAAGGGCCCTCTGTACATTTGTAACTCTGAA +
Preference number: 1 (lower is better)
Translates to: YSLHSGNLCPSCLPP*MLGDKGPLYICNSE
Trigger: TTCAGAGTTACAAATGTACAGAGGGCCCTTGTCCCCCAACATGCAGGGAGGGAGGCAAGAGGGGCACAGGTTGCCAGAGTGGAGACTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp GCTCCACCCAGGAGGGATTTGCCTGAGCAACTAGGGGAGCCATCTTaGTTCCCGGATCCCTCTGAGACAAGTCTTTGCAGGTTAGAGTGT +
Preference number: 1 (lower is better)
Translates to: APPRRDLPEQLGEPS*FPDPSETSLCRLEC
Trigger: ACACTCTAACCTGCAAAGACTTGTCTCAGAGGGATCCGGGAACCAAGATGGCTCCCCTAGTTGCTCAGGCAAATCCCTCCTGGGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp ACAAAACCTCTCCTGTGTGCATCTGTCTGTTATTCATCCACGCTTTaGCCACCCGCATCGAGAGACCCCATTCCACGCAGACACAGGGAC +
Preference number: 1 (lower is better)
Translates to: TKPLLCASVCYSSTL*PPASRDPIPRRHRD
Trigger: GTCCCTGTGTCTGCGTGGAATGGGGTCTCTCGATGCGGGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAGAGGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp TCCAATCACGTGGGACCTGAGACAGCATTAGGGAAGCAGAAAACCTaGCCTGACCAGGGTCAAAAGTCCCTTTCAGTTGGCACCAGCACC +
Preference number: 1 (lower is better)
Translates to: SNHVGPETALGKQKT*PDQGQKSLSVGTST
Trigger: GGTGCTGGTGCCAACTGAAAGGGACTTTTGACCCTGGTCAGGCCAGGTTTTCTGCTTCCCTAATGCTGTCTCAGGTCCCACGTGATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp CGGCCTCCCAGAGCTCATGTCTCTAGCTGCATATGTATCAGAAGATaGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCATTGGTCTTGC +
Preference number: 1 (lower is better)
Translates to: RPPRAHVSSCICIRR*PSQPSLEREAHWSC
Trigger: GCAAGACCAATGGGCCTCTCTTTCCAGTGATGGCTGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACATGAGCTCTGGGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp GGACCTAGCAAACACAGAAGTGGATGCTTACAGTCAGCTATTGTCTaGATCACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTCCCCAAG +
Preference number: 1 (lower is better)
Translates to: GPSKHRSGCLQSAIV*ITGPPVEELEKVPK
Trigger: CTTGGGGACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTGATCCAGACAATAGCTGACTGTAAGCATCCACTTCTGTGTTTGCTAGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 90 bp CAAGAACCTAAAGGGGTCTGCAACCCTACAGGTGAAACAACAATATaGACTGACCAGTACCGGCCTCCCAGAGCTCATGTCTCTAGCTGC +
Preference number: 1 (lower is better)
Translates to: QEPKGVCNPTGETTI*TDQYRPPRAHVSSC
Trigger: GCAGCTAGAGACATGAGCTCTGGGAGGCCGGTACTGGTCAGTTCATATTGTTGTTTCACCTGTAGGGTTGCAGACCCCTTTAGGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 90 bp CTGCTAGCAGAAGAGTGGCACAGCTGCTTCTGTAGCTACCAGATTTaGGGGGCACCTGTTATCCCAAATGGAGTGCCCTCCAAAAGCATT +
Preference number: 1 (lower is better)
Translates to: LLAEEWHSCFCSYQI*GAPVIPNGVPSKSI
Trigger: AATGCTTTTGGAGGGCACTCCATTTGGGATAACAGGTGCCCCTCAAATCTGGTAGCTACAGAAGCAGCTGTGCCACTCTTCTGCTAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp ACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAGTaGAGGACTGTTCCTGTTTCTCCACATCCTCGCCAGCATCTGCTG +
Preference number: 1 (lower is better)
Translates to: TDFQSGCTSLQSHQQ*RTVPVSPHPRQHLL
Trigger: CAGCAGATGCTGGCGAGGATGTGGAGAAACAGGAACAGTCCTCCACTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp CAAGGTTGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTaGAAGCTTGTACAACCACTCTGGAAATCAGTCTGCCAACTCCTC +
Preference number: 1 (lower is better)
Translates to: QGCGERGTLLHCWWD*KLVQPLWKSVCQLL
Trigger: GAGGAGTTGGCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp GAATGTAGATATCTCTGCACCTTTGCTGCAAGAGGAGAGCTGGCCTaGAGAGAGTGTCTGACCACTGAAACACAGGAGAAATCTAGTCTC +
Preference number: 1 (lower is better)
Translates to: ECRYLCTFAARGELA*RECLTTETQEKSSL
Trigger: GAGACTAGATTTCTCCTGTGTTTCAGTGGTCAGACACTCTCTGCAGGCCAGCTCTCCTCTTGCAGCAAAGGTGCAGAGATATCTACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp AGATGCTGGCAAGGTTGTGGAGAAAGAGGAACACTCCTCCATTGTTaGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGC +
Preference number: 1 (lower is better)
Translates to: RCWQGCGERGTLLHC*WDCKLVQPLWKSVC
Trigger: GCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTGCCAGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp CCAGTCAGAATGGCTAAGATAAACAATTCTGGTGACAGCAGATGCTaGCAAGGTTGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGG +
Preference number: 1 (lower is better)
Translates to: PVRMAKINNSGDSRC*QGCGERGTLLHCWW
Trigger: CCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTGCCAGCATCTGCTGTCACCAGAATTGTTTATCTTAGCCATTCTGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp TCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCTaGGTTTGGGAGCTGATTATGGGATGGATCCCTGGATATGGCAAT +
Preference number: 1 (lower is better)
Translates to: SGSFQQNLASVCNGV*VWELIMGWIPGYGN
Trigger: ATTGCCATATCCAGGGATCCATCCCATAATCAGCTCCCAAACGCAGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp AGATTTTTCACCAAAGACTATGAAAGCCAGAAGATCCTGGACAGATaGTATACAGACACAGAGAGAACCCAAATGCCAGCCCAGGCTACT +
Preference number: 1 (lower is better)
Translates to: RFFTKDYESQKILDR*YTDTERTQMPAQAT
Trigger: AGTAGCCTGGGCTGGCATTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 90 bp TTGGGCTTGGAATTCAGTACTGCCCCTGGTATTACACTATCTCTTTaGGTAAAAGTTAGGTCACTGCCCTTCACAGGAATCTACCATCAC +
Preference number: 1 (lower is better)
Translates to: LGLEFSTAPGITLSL*VKVRSLPFTGIYHH
Trigger: GTGATGGTAGATTCCTGTGAAGGGCAGTGACCTAACTTTTACTCAAAGAGATAGTGTAATACCAGGGGCAGTACTGAATTCCAAGCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp CGAATTGTAAATTACATTCAGATTCTACACAAAACCTCTCCTGTGTaGATCTGTCTGTTATTCATCCACGCTTTGCCCACCCGCATCGAG +
Preference number: 1 (lower is better)
Translates to: RIVNYIQILHKTSPV*ICLLFIHALPTRIE
Trigger: CTCGATGCGGGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAGAGGTTTTGTGTAGAATCTGAATGTAATTTACAATTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp AGAAGATCCTGGACAGATGCTATACAGACACAGAGAGAACCCAAATaGCAGCCCAGGCTACTATACCCAGCCAAACTTTCAATTACTATA +
Preference number: 1 (lower is better)
Translates to: RRSWTDAIQTQREPK*QPRLLYPAKLSITI
Trigger: TATAGTAATTGAAAGTTTGGCTGGGTATAGTAGCCTGGGCTGGCATTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp TGGAGCATGTGTCCTTCTTACCAGTTGGAAAATCTTCTGGATATATaGCCAGGAGAGGTATTGTTGGATCCTCGGGTAGTAATATGTCCA +
Preference number: 1 (lower is better)
Translates to: WSMCPSYQLENLLDI*PGEVLLDPRVVICP
Trigger: TGGACATATTACTACCCGAGGATCCAACAATACCTCTCCTGGGCATATATCCAGAAGATTTTCCAACTGGTAAGAAGGACACATGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp ACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTaGAAATCAGTCTGCCAACTCCTCAGAAAATTGGACATTGTACTA +
Preference number: 1 (lower is better)
Translates to: TLLHCWWDCKLVQPL*KSVCQLLRKLDIVL
Trigger: TAGTACAATGTCCAATTTTCTGAGGAGTTGGCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp ATTACACCAGATTTTTCACCAAAGACTATGAAAGCCAGAAGATCCTaGACAGATGCTATACAGACACAGAGAGAACCCAAATGCCAGCCC +
Preference number: 1 (lower is better)
Translates to: ITPDFSPKTMKARRS*TDAIQTQREPKCQP
Trigger: GGGCTGGCATTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAAAATCTGGTGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp GAAAATTGGACATTGTACTACCGGAGGATCCTGCAATACCTCTTCTaGGCATATATCCAGAAGATGTTCCAACCAGTAAGAAGGACACAT +
Preference number: 1 (lower is better)
Translates to: ENWTLYYRRILQYLF*AYIQKMFQPVRRTH
Trigger: ATGTGTCCTTCTTACTGGTTGGAACATCTTCTGGATATATGCCCAGAAGAGGTATTGCAGGATCCTCCGGTAGTACAATGTCCAATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp AATAGAGCAGCAATGGCTTGTGCTGTTAGATCCAGAATCGACAAATaGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAGAGACACC +
Preference number: 1 (lower is better)
Translates to: NRAAMACAVRSRIDK*DLIKLQSFCKARDT
Trigger: GGTGTCTCTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTGGATCTAACAGCACAAGCCATTGCTGCTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 90 bp AAGGCAAGCCTATCAGAATTACACCAGATTTTTCACCAAAGACTATaGAAGCCAGAAGATCCTGGACAGATGCTATACAGACACAGAGAG +
Preference number: 1 (lower is better)
Translates to: KASLSELHQIFHQRL*KPEDPGQMLYRHRE
Trigger: CTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAAAATCTGGTGTAATTCTGATAGGCTTGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 90 bp AGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATACTGCCTaGTTCTTGGTACTTACTGTATTTAAGTTACAGCTTACACAGTGG +
Preference number: 1 (lower is better)
Translates to: RKLACSLSTELENTA*FLVLTVFKLQLTQW
Trigger: CCACTGTGTAAGCTGTAACTTAAATACAGTAAGTACCAAGAATCAGGCAGTATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp GAGCAACAGCAACAGAAAACAAGAGATAGAAGGGAGAATCTCAGGTaGAGAAGATTCCATAGGGAACATGGGCACAACAATCAAAGAAAA +
Preference number: 1 (lower is better)
Translates to: EQQQQKTRDRRENLR*RRFHREHGHNNQRK
Trigger: TTTTCTTTGATTGTTGTGCCCATGTTCCCTATGGAATCTTCTGCACCTGAGATTCTCCCTTCTATCTCTTGTTTTCTGTTGCTGTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp GTAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATaGATACAGAAAATGTGGTATATTTACACAATGGAGTACTACTCA +
Preference number: 1 (lower is better)
Translates to: VARSWKEPRCPSTEE*IQKMWYIYTMEYYS
Trigger: TGAGTAGTACTCCATTGTGTAAATATACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp TATCCACTTATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTaGGTTACCTCACTCAGTATGATGCCCTCCATGTCCATCCATTTG +
Preference number: 1 (lower is better)
Translates to: YPLISEYTSCEFFCD*VTSLSMMPSMSIHL
Trigger: CAAATGGATGGACATGGAGGGCATCATACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGATAAGTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp TATTATCACACTATGGAGAGCAGGTCTAAGATAAAAATAGAGGCTTaGCTAACCACAGGTAAACTCTATAACCTCAGACGAGATAAGCCA +
Preference number: 1 (lower is better)
Translates to: YYHTMESRSKIKIEA*LTTGKLYNLRRDKP
Trigger: TGGCTTATCTCGTCTGAGGTTATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTCCATAGTGTGATAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp CCAGCCCAGGCTACTATACCCAGCCAAACTTTCAATTACTATAGATaGAGAAAGCAAAGTATTCCACGACAAAACCAAATTCACACATTA +
Preference number: 1 (lower is better)
Translates to: PAQATIPSQTFNYYR*RKQSIPRQNQIHTL
Trigger: TAATGTGTGAATTTGGTTTTGTCGTGGAATACTTTGCTTTCTCCATCTATAGTAATTGAAAGTTTGGCTGGGTATAGTAGCCTGGGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp GGTGTTTTGTTCCCATTTCTAGGAAGGGGCAAAGTGTCCACACTTTaGTCTTCATTCTTCTTGAGTTTCATGAGTTTAACAATTACTCTG +
Preference number: 1 (lower is better)
Translates to: GVLFPFLGRGKVSTL*SSFFLSFMSLTITL
Trigger: CAGAGTAATTGTTAAACTCATGAAACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCCTAGAAATGGGAACAAAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 90 bp AGGATATACCTTCTTCTCAGCATCTCACAGAACCTTCTCCAAAATTaGCCACATAATTGGTCACAAAACAGGCCTCAACAGATACAAAAA +
Preference number: 1 (lower is better)
Translates to: RIYLLLSISQNLLQN*PHNWSQNRPQQIQK
Trigger: TTTTTGTATCTGTTGAGGCCTGTTTTGTGACCAATTATGTGGTCAATTTTGGAGAAGGTTCTGTGAGATGCTGAGAAGAAGGTATATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 90 bp TTTTTATCACAATTGCTCTGTAGTACAGCTTTAGGTCAGGCATGGTaGTTCCACCAGAGGTTCTTTAATCCTTCAGAAGAGTTTTTGCTA +
Preference number: 1 (lower is better)
Translates to: FLSQLLCSTALGQAW*FHQRFFNPSEEFLL
Trigger: TAGCAAAAACTCTTCTGAAGGATTAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTGTACTACAGAGCAATTGTGATAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp CTTCCTCAGAGACTTTTTGTATGGACCAAAGCGACAAATATTTATTaGCATGTATGGCAGACTATGAGACATACAACAAAAGCACTTTGC +
Preference number: 1 (lower is better)
Translates to: LPQRLFVWTKATNIY*HVWQTMRHTTKALC
Trigger: GCAAAGTGCTTTTGTTGTATGTCTCATAGTCTGCCATACATGGCAATAAATATTTGTCGCTTTGGTCCATACAAAAAGTCTCTGAGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 90 bp TTTTGGCAAGATAGCCAATTTTACTATATTGATCCTGCCAATCCATaGGCATGGGAGGTCTTTCCATCTTCTGAGATCTTCTTTAATTTC +
Preference number: 1 (lower is better)
Translates to: FWQDSQFYYIDPANP*AWEVFPSSEIFFNF
Trigger: GAAATTAAAGAAGATCTCAGAAGATGGAAAGACCTCCCATGCTCATGGATTGGCAGGATCAATATAGTAAAATTGGCTATCTTGCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp TTCAAGGCTTTTTCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTaGTTTAAGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAGTA +
Preference number: 1 (lower is better)
Translates to: FKAFSHFLLYKFQCL*FKWSSLIHLDLTLV
Trigger: TACTAAGGTCAAATCTAAGTGGATTAAGGAACTCCACTTAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGAAAAAGCCTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 90 bp CTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTTGATTCTTaGTCTTACAGCACAAGCCATTGGAGTTCTATTCAGGAATATTTC +
Preference number: 1 (lower is better)
Translates to: LTEALQFYEVPFVDS*SYSTSHWSSIQEYF
Trigger: GAAATATTCCTGAATAGAACTCCAATGGCTTGTGCTGTAAGATCAAGAATCAACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 90 bp CTGACTTTGTCTCAATTATTTTATTGCCTAGTTCCTTCCGATCTTTaGATTTTCATTCCTCTGTTCTCTGTAAGAATCATTAAGCATCCG +
Preference number: 1 (lower is better)
Translates to: LTLSQLFYCLVPSDL*IFIPLFSVRIIKHP
Trigger: CGGATGCTTAATGATTCTTACAGAGAACAGAGGAATGAAAATGCAAAGATCGGAAGGAACTAGGCAATAAAATAATTGAGACAAAGTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp CTGATCTTCAATAACAACATAAATAATGGAAAGCCAACATTCACGTaGAAACTGAACAACAGTCTTCTCAATGATACCTTGGTCAAGGAA +
Preference number: 1 (lower is better)
Translates to: LIFNNNINNGKPTFT*KLNNSLLNDTLVKE
Trigger: TTCCTTGACCAAGGTATCATTGAGAAGACTGTTGTTCAGTTTCCACGTGAATGTTGGCTTTCCATTATTTATGTTGTTATTGAAGATCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 90 bp TCCTTTAGACAATATCTGTTTTATCTTCCTCAGAGACTTTTTGTATaGACCAAAGCGACAAATATTTATTGCCATGTATGGCAGACTATG +
Preference number: 1 (lower is better)
Translates to: SFRQYLFYLPQRLFV*TKATNIYCHVWQTM
Trigger: CATAGTCTGCCATACATGGCAATAAATATTTGTCGCTTTGGTCCATACAAAAAGTCTCTGAGGAAGATAAAACAGATATTGTCTAAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp CCAGGGCCACAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTaGGGCACAGAGTCAGCAGACTCCTCCAAGGTCCCTAGAGGACTA +
Preference number: 2 (lower is better)
Translates to: PGPQIPSSLQQHWVT*GTESADSSKVPRGL
Trigger: TAGTCCTCTAGGGACCTTGGAGGAGTCTGCTGACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp CACAAAACCTCTCCTGTGTGCATCTGTCTGTTATTCATCCACGCTTaGCCCACCCGCATCGAGAGACCCCATTCCACGCAGACACAGGGA +
Preference number: 2 (lower is better)
Translates to: HKTSPVCICLLFIHA*PTRIERPHSTQTQG
Trigger: TCCCTGTGTCTGCGTGGAATGGGGTCTCTCGATGCGGGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAGAGGTTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp CTAGGACTCCATAGAATGACCAGCAGTCTCAGCAAACCTGGACCCTaGAGCTCTCTCACACACTGTGCCACCACCTGGGCACATACACCA +
Preference number: 2 (lower is better)
Translates to: LGLHRMTSSLSKPGP*SSLTHCATTWAHTP
Trigger: TGGTGTATGTGCCCAGGTGGTGGCACAGTGTGTGAGAGAGCTCAAGGGTCCAGGTTTGCTGAGACTGCTGGTCATTCTATGGAGTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp TTAAATGAAATGTTACAGTCTCCACTCTGGCAACCTGTGCCCCTCTaGCCTCCCTCCCTGCATGTTGGGGGACAAGGGCCCTCTGTACAT +
Preference number: 2 (lower is better)
Translates to: LNEMLQSPLWQPVPL*PPSLHVGGQGPSVH
Trigger: ATGTACAGAGGGCCCTTGTCCCCCAACATGCAGGGAGGGAGGCAAGAGGGGCACAGGTTGCCAGAGTGGAGACTGTAACATTTCATTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp ACAGCTTCTGGGACAGGCCTTGTTTCGGGCCTGCATCTTCTGCCAGGAGGCAGGTACAGGGATTTACTATaGTTTAGGAAGCAGATCGGC +
Preference number: 2 (lower is better)
Translates to: TASGTGLVSGLHLLPGGRYRDLL*FRKQIG
Trigger: GCCGATCTGCTTCCTAAACCATAGTAAATCCCTGTA...CCTGCCTCCTGGCAGAAGATGCAGGCCCGAAACAAGGCCTGTCCCAGAAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp GCCACAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTTGGGCACAGAGTCAACTCCTCAGAAAATTaGACATTGTACTACCGGAGG +
Preference number: 2 (lower is better)
Translates to: ATNPFQSAAALGHLGHRVNSSEN*TLYYRR
Trigger: CCTCCGGTAGTACAATGTCCAATTTTCTGAGGAGTT...GACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp ACAGCTTCTGGGACAGGCCTTGTTTCGGGCCTGCATCTTCTGCCAGGAGGCAGGAATTCTGAATATCTATaGTCCAAATTCAAGGACAGC +
Preference number: 2 (lower is better)
Translates to: TASGTGLVSGLHLLPGGRNSEYL*SKFKDS
Trigger: GCTGTCCTTGAATTTGGAGCATAGATATTCAGAATT...CCTGCCTCCTGGCAGAAGATGCAGGCCCGAAACAAGGCCTGTCCCAGAAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp ACAGCTTCTGGGACAGGCCTTGTTTCGGGCCTGCATCTTCTGCCAGGAGGCAGGAGAAATGACTTAAAGTaGGAATACAGAGAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: TASGTGLVSGLHLLPGGRRNDLK*EYREEK
Trigger: TTTCTCCTCTCTGTATTCCCACTTTAAGTCATTTCT...CCTGCCTCCTGGCAGAAGATGCAGGCCCGAAACAAGGCCTGTCCCAGAAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp CACCTGGGCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTGCTGCAATACCTCTTCTaGGCATATATCCAGAAGATG +
Preference number: 2 (lower is better)
Translates to: HLGMESADTCNVPREQLLLQYLF*AYIQKM
Trigger: CATCTTCTGGATATATGCCCAGAAGAGGTATTGCAG...CAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp CACCTGGGCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTGAAACACAGAAGTGGATaGTTACAGTCAGCTATTGTC +
Preference number: 2 (lower is better)
Translates to: HLGMESADTCNVPREQLLKHRSG*LQSAIV
Trigger: GACAATAGCTGACTGTAAGCATCCACTTCTGTGTTT...CAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATCGGGCCTGCATCTTCTaGCAGGAGGCAGGTCCGAAT +
Preference number: 2 (lower is better)
Translates to: FTFSFRKLACSLSTELENRACIF*QEAGPN
Trigger: ATTCGGACCTGCCTCCTGGCAGAAGATGCAGGCCCG...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp CTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACCAGGGCCAAGAAGTaGGAGTGGGTGGGTAGGGGT +
Preference number: 2 (lower is better)
Translates to: LRIGNKTPMEGVTETKFGTRAKK*EWVGRG
Trigger: ACCCCTACCCACCCACTCCCACTTCTTGGCCCTGGT...TCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp GCCACAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTTGGGCACAGAGTCAAGGTCAAATCTAAGTaGATTAAGGAACTCCACATA +
Preference number: 2 (lower is better)
Translates to: ATNPFQSAAALGHLGHRVKVKSK*IKELHI
Trigger: TATGTGGAGTTCCTTAATCCACTTAGATTTGACCTT...GACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp GAGACAAGTCTTTGCAGGTTAGAGTGTGAACTACAGAAGCTAACAGCTTCTGGGGCAAGACCTTGGGCTTaGAATTCAGTACTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: ETSLCRLECELQKLTASGARPWA*NSVLPL
Trigger: CAGGGGCAGTACTGAATTCCAAGCCCAAGGTCTTGC...CCCAGAAGCTGTTAGCTTCTGTAGTTCACACTCTAACCTGCAAAGACTTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAAGGTCACCTGGTCACCTaGTCACCTGGGCATGGAGTC +
Preference number: 2 (lower is better)
Translates to: SIGLLVCRYTSSMQFLSQGHLVT*SPGHGV
Trigger: GACTCCATGCCCAGGTGACCAGGTGACCAGGTGACC...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATGTTGGCACCAGCACCTaGTCACCTGGTCACCTGGTC +
Preference number: 2 (lower is better)
Translates to: FTFSFRKLACSLSTELENVGTST*SPGHLV
Trigger: GACCAGGTGACCAGGTGACCAGGTGCTGGTGCCAAC...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCTCTGGCAAGGTGGAGTaGGGATGGCCTCTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: RGKVSTLWSSFFLSFMYFSGKVE*GWPLGD
Trigger: GTCTCCAAGAGGCCATCCCCACTCCACCTTGCCAGA...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTATCCCTCCCTGCATGTTaGGGGACAAGGGCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: SVSTHHVSSFVIGLPHSVSLPAC*GTRALC
Trigger: ACAGAGGGCCCTTGTCCCCCAACATGCAGGGAGGGA...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAATCCAGGCACCTTCCCTaGAAGAGGAGAGGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: SIGLLVCRYTSSMQFLSQSRHLP*KRRGVC
Trigger: GCAGACACCTCTCCTCTTGCAGGGAAGGTGCCTGGA...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATCCTGGGCATGGAGTCTaGAGACACCTGCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: ESRSKIKIEACLTTGKLYPGHGV*RHLQCP
Trigger: GGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGG...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAAAACCTGTGCCCCTCTTaGCTCCCTCCCTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: SIGLLVCRYTSSMQFLSQNLCPS*LPPCML
Trigger: CAACATGCAGGGAGGGAGGCAAGAGGGGCACAGGTT...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp CACCTGGGCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTGCCAGAGATTACCAAATaGCAAAAGGCAAACTTAAGA +
Preference number: 2 (lower is better)
Translates to: HLGMESADTCNVPREQLLPEITK*QKANLR
Trigger: TCTTAAGTTTGCCTTTTGCCATTTGGTAATCTCTGG...CAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTGGTCACCTGGTCACCTaGGCATGGAGTCTGCAGACA +
Preference number: 2 (lower is better)
Translates to: ISEYTSCEFFCDWVTSLSGHLVT*AWSLQT
Trigger: TGTCTGCAGACTCCATGCCCAGGTGACCAGGTGACC...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATAGTCTGCAGCAGCACTaGGTCACCTTGGGCACAGAG +
Preference number: 2 (lower is better)
Translates to: FTFSFRKLACSLSTELENSLQQH*VTLGTE
Trigger: CTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACT...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTATCCCACTCCCACTTTTaGCCCTGGCGTTCCCCTGTA +
Preference number: 2 (lower is better)
Translates to: SVSTHHVSSFVIGLPHSVSHSHF*PWRSPV
Trigger: TACAGGGGAACGCCAGGGCCAAAAGTGGGAGTGGGA...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp CGTCTCAAGGATAAAAGAGCCTCTGGTGGAATCACCATGTCTGACCTAAAGCTGAAATTCCTAGGCAAATaGATGGACCTGGAAGGCATC +
Preference number: 2 (lower is better)
Translates to: RLKDKRASGGITMSDLKLKFLGK*MDLEGI
Trigger: GATGCCTTCCAGGTCCATCCATTTGCCTAGGAATTT...CAGCTTTAGGTCAGACATGGTGATTCCACCAGAGGCTCTTTTATCCTTGAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp GAGACAAGTCTTTGCAGGTTAGAGTGTGAACTACAGAAGCTAACAGCTTCTGGGATGCTGGCAAGGTTGTaGAGAAAGAGGAACACTCCT +
Preference number: 2 (lower is better)
Translates to: ETSLCRLECELQKLTASGMLARL*RKRNTP
Trigger: AGGAGTGTTCCTCTTTCTCCACAACCTTGCCAGCAT...CCCAGAAGCTGTTAGCTTCTGTAGTTCACACTCTAACCTGCAAAGACTTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCAACAACAATATGAACTaGCCAGTACCGGCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: RGKVSTLWSSFFLSFMYFNNNMN*PVPASQ
Trigger: CTGGGAGGCCGGTACTGGTCAGTTCATATTGTTGTT...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAGTTCCCGGATCCCTCTaGGACAAGTCTTTGCAGGTT +
Preference number: 2 (lower is better)
Translates to: SVSTHHVSSFVIGLPHSVVPGSL*DKSLQV
Trigger: AACCTGCAAAGACTTGTCTCAGAGGGATCCGGGAAC...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCGGGTGTGAAAGCCCTTaGCCTAGGAGTGAAAAGTTC +
Preference number: 2 (lower is better)
Translates to: RGKVSTLWSSFFLSFMYFGCESP*PRSEKF
Trigger: GAACTTTTCACTCCTAGGGCAAGGGCTTTCACACCC...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAAAGGAAGCTCTCCTCCTaGAGTCTAGCATTCCCTACC +
Preference number: 2 (lower is better)
Translates to: SIGLLVCRYTSSMQFLSQRKLSS*SLAFPT
Trigger: GGTAGGGAATGCTAGACTCCAGGAGGAGAGCTTCCT...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATGGGAAGCAGAAAACCTaGCCTGACCAGGGTCAAAAG +
Preference number: 2 (lower is better)
Translates to: FTFSFRKLACSLSTELENGKQKT*PDQGQK
Trigger: CTTTTGACCCTGGTCAGGCCAGGTTTTCTGCTTCCC...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATCAGTCTCAGCAAACCTaGACCCTTGAGCTCTCTCAC +
Preference number: 2 (lower is better)
Translates to: ESRSKIKIEACLTTGKLYQSQQT*TLELSH
Trigger: GTGAGAGAGCTCAAGGGTCCAGGTTTGCTGAGACTG...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp CTTCCCAACTCATCTCACACACAACCCCATCTACTAATCCTTTCTTaGTCCTCAGAAAAGAGGAGGCCTCCTAAGTATATCAACCAGCTT +
Preference number: 2 (lower is better)
Translates to: LPNSSHTQPHLLILS*SSEKRRPPKYINQL
Trigger: AAGCTGGTTGATATACTTAGGAGGCCTCCTCTTTTCTGAGGACAAAGAAAGGATTAGTAGATGGGGTTGTGTGTGAGATGAGTTGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp GGACCACCGGTGAGTGTAACACAACTTCTGTTTCTTTCTAATCACTaGGGACCTGAGATAGCATTGAGTGGAACACAACTTCTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: GPPVSVTQLLFLSNH*GPEIALSGTQLLFH
Trigger: ATGGAACAGAAGTTGTGTTCCACTCAATGCTATCTCAGGTCCCAAGTGATTAGAAAGAAACAGAAGTTGTGTTACACTCACCGGTGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp GTCACAGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTaGTTCCCATTTCTAGGAAGGGGCAAAGTGTCCACACTTTGGTCT +
Preference number: 2 (lower is better)
Translates to: VTAPNFVSVTPSMGV*FPFLGRGKVSTLWS
Trigger: AGACCAAAGTGTGGACACTTTGCCCCTTCCTAGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTCAATCGCACTGGACCTaGGACAGCATTAGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: SSKFCLCNSFNGCFVPISQSHWT*DSIREA
Trigger: TGCTTCCCTAATGCTGTCTCAGGTCCAGTGCGATTG...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTGGAGGAGAAATGGGATaGGGAACTATCAGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: SSKFCLCNSFNGCFVPISGGEMG*GTIRGQ
Trigger: CTGCCCTCTGATAGTTCCTCATCCCATTTCTCCTCC...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTATCTGGTGACAGCAGATaGTGGCAAGGTTGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: SVSTHHVSSFVIGLPHSVSGDSR*WQGCGE
Trigger: TTCTCCACAACCTTGCCAGCATCTGCTGTCACCAGA...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTCAGAGAGAACCCAAATaGCAGCCCAGGCTACTATAC +
Preference number: 2 (lower is better)
Translates to: ISEYTSCEFFCDWVTSLSQREPK*QPRLLY
Trigger: GTATAGTAGCCTGGGCTGGCATTTGGGTTCTCTCTG...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp GAGACAAGTCTTTGCAGGTTAGAGTGTGAACTACAGAAGCTAACAGCTTCTGGGGAATGTAGATATCTCTaGACCTTTGCTGCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: ETSLCRLECELQKLTASGECRYL*TFAARG
Trigger: TCCTCTTGCAGCAAAGGTGCAGAGATATCTACATTC...CCCAGAAGCTGTTAGCTTCTGTAGTTCACACTCTAACCTGCAAAGACTTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp CGTCTCAAGGATAAAAGAGCCTCTGGTGGAATCACCATGTCTGACCTAAAGCTGCCCTCAACAGAGGAATaGATACAGAAAATGTGGTAT +
Preference number: 2 (lower is better)
Translates to: RLKDKRASGGITMSDLKLPSTEE*IQKMWY
Trigger: ATACCACATTTTCTGTATCCATTCCTCTGTTGAGGG...CAGCTTTAGGTCAGACATGGTGATTCCACCAGAGGCTCTTTTATCCTTGAGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCGTGACCATAGGTGTGTaGGTTCATTTCTGGGTCTAC +
Preference number: 2 (lower is better)
Translates to: RGKVSTLWSSFFLSFMYFVTIGV*VHFWVY
Trigger: GTAGACCCAGAAATGAACCCACACACCTATGGTCAC...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp AGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATaGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTG +
Preference number: 2 (lower is better)
Translates to: RRTKTKVWTLCPFLE*GTKHPWKELQRQSL
Trigger: CAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp ACACAACTTCTGTTTCTTTCTAATCACTTGGGACCTGAGATAGCATaGAGTGGAACACAACTTCTGTTCCATTCCAATCGCACTGGACCT +
Preference number: 2 (lower is better)
Translates to: TQLLFLSNHLGPEIA*SGTQLLFHSNRTGP
Trigger: AGGTCCAGTGCGATTGGAATGGAACAGAAGTTGTGTTCCACTCAATGCTATCTCAGGTCCCAAGTGATTAGAAAGAAACAGAAGTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp AGTAGTACTCCATCGTGTACCACATTTTCTGTATCCATACCTCTGTaGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTACAAATA +
Preference number: 2 (lower is better)
Translates to: SSTPSCTTFSVSIPL*RGIWVLSSFWLLQI
Trigger: TATTTGTAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGTATGGATACAGAAAATGTGGTACACGATGGAGTACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp ATAGTAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATAAGAGAAAAGTCATCCTaGTCACAGATTTCCATCCTT +
Preference number: 2 (lower is better)
Translates to: IVARSWKEPRCPSTEEWIREKSS*SQISIL
Trigger: AAGGATGGAAATCTGTGATCAGGATGACTTTTCTCT...TATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAGGTGAAACAACAATATaGACTGACCAGTACCGGCCT +
Preference number: 2 (lower is better)
Translates to: SVSTHHVSSFVIGLPHSVGETTI*TDQYRP
Trigger: AGGCCGGTACTGGTCAGTTCATATTGTTGTTTCACC...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAAAAGGATGGGCCATCTaGAGACTGCCTTATGAATCC +
Preference number: 2 (lower is better)
Translates to: SVSTHHVSSFVIGLPHSVKGWAI*RLPYES
Trigger: GGATTCATAAGGCAGTCTTCAGATGGCCCATCCTTT...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAATAGTAGCCAGAAGCTaGAAAGAACCCAGATGTCCC +
Preference number: 2 (lower is better)
Translates to: SVSTHHVSSFVIGLPHSVIVARS*KEPRCP
Trigger: GGGACATCTGGGTTCTTTCCAGCTTCTGGCTACTAT...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTCAGGGGAAAAATTCCTaGATAGAGCAGCAATGGCTT +
Preference number: 2 (lower is better)
Translates to: ISEYTSCEFFCDWVTSLSQGKNS*IEQQWL
Trigger: AAGCCATTGCTGCTCTATTCAGGAATTTTTCCCCTG...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATTGGAATCACCATGTCTaGCCTAAAGCTGTACTACAG +
Preference number: 2 (lower is better)
Translates to: FTFSFRKLACSLSTELENWNHHV*PKAVLQ
Trigger: CTGTAGTACAGCTTTAGGTCAGACATGGTGATTCCA...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp ATGGCTGACTTTGTCTCAATTATTTTATTGCCTAGTTCCTTCCGATCTTTGCATCTAGTCAGCCATCACTaGAAAGAGAGGCCCATTGGT +
Preference number: 2 (lower is better)
Translates to: MADFVSIILLPSSFRSLHLVSHH*KERPIG
Trigger: ACCAATGGGCCTCTCTTTCCAGTGATGGCTGACTAG...ATGCAAAGATCGGAAGGAACTAGGCAATAAAATAATTGAGACAAAGTCAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp GTGTGGGTTCATTTCTGGGTCTACAATTCTATTCCATTGGTCTACTaGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAATTGC +
Preference number: 2 (lower is better)
Translates to: VWVHFWVYNSIPLVY*SVAIPVPCSFYHNC
Trigger: GCAATTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGAATAGAATTGTAGACCCAGAAATGAACCCACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp ACCATAGGTGTGTGGGTTCATTTCTGGGTCTACAATTCTATTCCATaGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTAT +
Preference number: 2 (lower is better)
Translates to: TIGVWVHFWVYNSIP*VYLSVAIPVPCSFY
Trigger: ATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGAATAGAATTGTAGACCCAGAAATGAACCCACACACCTATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp CTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGAAAGAGGCCAGAAATaGCTTAAAGTGGGAATACAG +
Preference number: 2 (lower is better)
Translates to: LRIGNKTPMEGVTETKFGERGQK*LKVGIQ
Trigger: CTGTATTCCCACTTTAAGTCATTTCTGGCCTCTTTC...TCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATATTCAACATTGTACTTaGAGTCCTAGCCCGAGCAAT +
Preference number: 2 (lower is better)
Translates to: FTFSFRKLACSLSTELENIQHCT*SPSPSN
Trigger: ATTGCTCGGGCTAGGACTTCAAGTACAATGTTGAAT...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTACATTCACGTGGAAACTaGACAACAGTCTTCTCAATG +
Preference number: 2 (lower is better)
Translates to: SVSTHHVSSFVIGLPHSVHSRGN*TTVFSM
Trigger: CATTGAGAAGACTGTTGTTCAGTTTCCACGTGAATG...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATTTTCACCAAAGACTATaGAAGCCAGAAGATCCTGGA +
Preference number: 2 (lower is better)
Translates to: ESRSKIKIEACLTTGKLYFHQRL*KPEDPG
Trigger: TCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAA...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTGAGAAAGTGGAGAAATaGCTCAGAGATATGGGCACA +
Preference number: 2 (lower is better)
Translates to: SSKFCLCNSFNGCFVPISEKVEK*LRDMGT
Trigger: TGTGCCCATATCTCTGAGGCATTTCTCCACTTTCTC...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATTTATCCCAAATGGAGTaGCCTCCAAAAGCATTGTCA +
Preference number: 2 (lower is better)
Translates to: ESRSKIKIEACLTTGKLYLSQME*PPKALS
Trigger: TGACAATGCTTTTGGAGGGCACTCCATTTGGGATAA...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTACGTTTACATTTCCAATaGTATCCCAAAAGTCCCCCA +
Preference number: 2 (lower is better)
Translates to: SVSTHHVSSFVIGLPHSVRLHFQ*YPKSPP
Trigger: TGGGGGACTTTTGGGATAGCATTGGAAATGTAAACG...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATTTGAACAAATGGTGCTaGCACAACTGGTGGTTATCA +
Preference number: 2 (lower is better)
Translates to: FTFSFRKLACSLSTELENLNKWC*HNWWLS
Trigger: TGATAACCACCAGTTGTGCCAGCACCATTTGTTCAA...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTACCTGTTATCCCAAATaGAGTGCCCTCCAAAAGCAT +
Preference number: 2 (lower is better)
Translates to: SSKFCLCNSFNGCFVPISTCYPK*SALQKH
Trigger: ATGCTTTTGGAGGGCACTCCATTTGGGATAACAGGT...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTTTACAGCTTACACAGTaGCAGTTTGGACCACTTACT +
Preference number: 2 (lower is better)
Translates to: ISEYTSCEFFCDWVTSLSLQLTQ*QFGPLT
Trigger: AGTAAGTGGTCCAAACTGCCACTGTGTAAGCTGTAA...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp GGGTGTTTTGTTCCCATTTCTAGGAAGGGGCAAAGTGTCCACACTTaGGTCTTCATTCTTCTTGAGTTTCATGAGTTTAACAATTACTCT +
Preference number: 2 (lower is better)
Translates to: GCFVPISRKGQSVHT*VFILLEFHEFNNYS
Trigger: AGAGTAATTGTTAAACTCATGAAACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCCTAGAAATGGGAACAAAACACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATCTTAAAAGTCACTCATaGGGCAAAAGAGTTTCAAGG +
Preference number: 2 (lower is better)
Translates to: ESRSKIKIEACLTTGKLYLKSHS*GKRVSR
Trigger: CCTTGAAACTCTTTTGCCTCATGAGTGACTTTTAAG...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAAATGTATGGCAGACTATaGGACATACAACAAAAGCAC +
Preference number: 2 (lower is better)
Translates to: SIGLLVCRYTSSMQFLSQMYGRL*DIQQKH
Trigger: GTGCTTTTGTTGTATGTCTCATAGTCTGCCATACAT...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAATCCAGGTACTTCACTaGAGCTGTTTATCAGGTTTA +
Preference number: 2 (lower is better)
Translates to: SVSTHHVSSFVIGLPHSVIQVLH*SCLSGL
Trigger: TAAACCTGATAAACAGCTTCAGTGAAGTACCTGGAT...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR TCA 90 bp TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAACCAATTTTACTATATTaGTCCTGCCAATCCATGAGC +
Preference number: 2 (lower is better)
Translates to: SIGLLVCRYTSSMQFLSQPILLY*SCQSMS
Trigger: GCTCATGGATTGGCAGGATCAATATAGTAAAATTGG...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTTACAGAGACAAAGTTTaGAGCCAAGATGAAAGGATG +
Preference number: 2 (lower is better)
Translates to: ISEYTSCEFFCDWVTSLSYRDKV*SQDERM
Trigger: CATCCTTTCATCTTGGCTCCAAACTTTGTCTCTGTA...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAGACACAGCTATATCTaGGTCCTTTCAGCAAAATCT +
Preference number: 2 (lower is better)
Translates to: ISEYTSCEFFCDWVTSLSRHSYI*VLSAKS
Trigger: AGATTTTGCTGAAAGGACCCAGATATAGCTGTGTCT...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCACAATTCTATTCCATTaGTCTACTTGTCTGTCGCTA +
Preference number: 2 (lower is better)
Translates to: RGKVSTLWSSFFLSFMYFTILFH*STCLSL
Trigger: TAGCGACAGACAAGTAGACCAATGGAATAGAATTGT...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCAAGTTTCAGTGTCTCTaGTTTAAGTGGAGTTCCTTA +
Preference number: 2 (lower is better)
Translates to: RGKVSTLWSSFFLSFMYFKFQCL*FKWSSL
Trigger: TAAGGAACTCCACTTAAACCAGAGACACTGAAACTT...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp TCTTTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTaGATTCTTGATCTTACAGCACAAGCCATTGGAGTTCTATTCAGG +
Preference number: 2 (lower is better)
Translates to: SFALQKLCNFMRSHL*ILDLTAQAIGVLFR
Trigger: CCTGAATAGAACTCCAATGGCTTGTGCTGTAAGATCAAGAATCAACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp CTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACACTAGCAAGGTTTTaGTTAAAGGACCCAGATATA +
Preference number: 2 (lower is better)
Translates to: LRIGNKTPMEGVTETKFGTLARF*LKDPDI
Trigger: TATATCTGGGTCCTTTAAGCAAAACCTTGCTAGTGT...TCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTACTTCATTTGTACCTTaGAAGTATGTCACCCAACTT +
Preference number: 2 (lower is better)
Translates to: ISEYTSCEFFCDWVTSLSTSFVP*KYVTQL
Trigger: AAGTTGGGTGACATACTTGCAAGGTACAAATGAAGT...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR GCA 90 bp GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATGTGTATGGATCCATGTaGTCTCTTTCAATATTTTCC +
Preference number: 2 (lower is better)
Translates to: ESRSKIKIEACLTTGKLYVYGSM*SLSIFS
Trigger: GGAAAATATTGAAAGAGAGCACATGGATCCATACAC...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp ATGGCTGACTTTGTCTCAATTATTTTATTGCCTAGTTCCTTCCGATCTTTGCATTGGTGCTGGCACAACTaGTGGTTATCATGTAGAAAA +
Preference number: 2 (lower is better)
Translates to: MADFVSIILLPSSFRSLHWCWHN*WLSCRK
Trigger: TTTTCTACATGATAACCACCAGTTGTGCCAGCACCA...ATGCAAAGATCGGAAGGAACTAGGCAATAAAATAATTGAGACAAAGTCAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTTCAATGGACAAATCGTaGAAACAGAAACCAAACAGG +
Preference number: 2 (lower is better)
Translates to: SSKFCLCNSFNGCFVPISSMDKS*KQKPNR
Trigger: CCTGTTTGGTTTCTGTTTCCACGATTTGTCCATTGA...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp AATGGTGCTGGCACAACTGGTGGTTATCATGTAGAAAAATGCAAATaGATTTATTCCTATCTCCCTGTACTAAGGTCAAATCTAAGTGGA +
Preference number: 2 (lower is better)
Translates to: NGAGTTGGYHVEKCK*IYSYLPVLRSNLSG
Trigger: TCCACTTAGATTTGACCTTAGTACAGGGAGATAGGAATAAATCAATTTGCATTTTTCTACATGATAACCACCAGTTGTGCCAGCACCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 90 bp ATGTCTTTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTaGTTGATTCTTGATCTTACAGCACAAGCCATTGGAGTTCTATTC +
Preference number: 2 (lower is better)
Translates to: MSFALQKLCNFMRSH*LILDLTAQAIGVLF
Trigger: GAATAGAACTCCAATGGCTTGTGCTGTAAGATCAAGAATCAACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CCA 90 bp AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTCTCAGAATGAAAGGCTaGAAAACAATTTTCCAAGCA +
Preference number: 2 (lower is better)
Translates to: SSKFCLCNSFNGCFVPISLRMKG*KTIFQA
Trigger: TGCTTGGAAAATTGTTTTCCAGCCTTTCATTCTGAG...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp ACTCGGCCTGACCAGGGCCACAAATCCCTTCCAGTCTaGGCCAGCACTGGGTCACGTTGGGCGCAGAGTCTG +
Preference number: 3 (lower is better)
Translates to: TRPDQGHKSLPV*ASTGSRWAQSL
Trigger: CAGACTCTGCGCCCAACGTGACCCAGTGCTGGCGCAGACTGGAAGGGATTTGTGGCCCTGGTCAGGCCGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp CCAGGGCCACAAATCCCTTCCAGTCTGCGCCAGCACTaGGTCACGTTGGGCGCAGAGTCTGCAGACAGCTCC +
Preference number: 3 (lower is better)
Translates to: PGPQIPSSLRQH*VTLGAESADSS
Trigger: GGAGCTGTCTGCAGACTCTGCGCCCAACGTGACCCAGTGCTGGCGCAGACTGGAAGGGATTTGTGGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp ACTCGGCCTGGCCAGGGCCACAAATCCCTTCCAGTCTaGAGCAGCACTGGGTCACCTTGGGCACAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: TRPGQGHKSLPV*SSTGSPWAQSQ
Trigger: CTGACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGCCCTGGCCAGGCCGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp GGTCAGCGCCAGCACCAGGTCACCTGGGCACAAAGTTaGCAGACACCCCCAAGGTCCCTAGAGGACTCTCCA +
Preference number: 3 (lower is better)
Translates to: GQRQHQVTWAQS*QTPPRSLEDSP
Trigger: TGGAGAGTCCTCTAGGGACCTTGGGGGTGTCTGCCAACTTTGTGCCCAGGTGACCTGGTGCTGGCGCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp TGTTACAGTCTCCACTCTGGCAACCTGTGCCCCTCTTaGCTCCCTCCCTGCATGTTGGGGGACAAGGGCCCT +
Preference number: 3 (lower is better)
Translates to: CYSLHSGNLCPS*LPPCMLGDKGP
Trigger: AGGGCCCTTGTCCCCCAACATGCAGGGAGGGAGGCAAGAGGGGCACAGGTTGCCAGAGTGGAGACTGTAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp AGGCCCCATGGAATAGGGAGGTCTGGCAAGGTGGAGTaGGGATGGCCTCTTGGAGACAGGGGAGGAGAAATG +
Preference number: 3 (lower is better)
Translates to: RPHGIGRSGKVE*GWPLGDRGGEM
Trigger: CATTTCTCCTCCCCTGTCTCCAAGAGGCCATCCCCACTCCACCTTGCCAGACCTCCCTATTCCATGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp CTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTaGGGCAGACCCCATTTCGGGCTCCAGACATCCAGG +
Preference number: 3 (lower is better)
Translates to: LQTPAMSLENSF*GRPHFGLQTSR
Trigger: CCTGGATGTCTGGAGCCCGAAATGGGGTCTGCCTCAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp TCACCTGGTCACCTGGGCATGGAGTCTGCAGACACCTaGAATGTCCCTAGAGAACAGCTTCTGAGGCAGACC +
Preference number: 3 (lower is better)
Translates to: SPGHLGMESADT*NVPREQLLRQT
Trigger: GGTCTGCCTCAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTGACCAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp AAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTTaGGCACAGAGTCAGCAGACTCCTCCAAGGTCCCTA +
Preference number: 3 (lower is better)
Translates to: KSLPVCSSTGSP*AQSQQTPPRSL
Trigger: TAGGGACCTTGGAGGAGTCTGCTGACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp CTCCTGTGTGCATCTGTCTGTTATTCATCCACGCTTTaGCCACCCGCATCGAGAGACCCCATTCCACGCAGA +
Preference number: 3 (lower is better)
Translates to: LLCASVCYSSTL*PPASRDPIPRR
Trigger: TCTGCGTGGAATGGGGTCTCTCGATGCGGGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp CTTCTGCCAGGAGGCAGGTCCGAATGTAGATATCTCTaGACCTTTGCTGCAAGAGGAGAGCTGGCCTGCAGA +
Preference number: 3 (lower is better)
Translates to: LLPGGRSECRYL*TFAARGELACR
Trigger: TCTGCAGGCCAGCTCTCCTCTTGCAGCAAAGGTGCAGAGATATCTACATTCGGACCTGCCTCCTGGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp AGGAGGGATTTGCCTGAGCAACTAGGGGAGCCATCTTaGTTCCCGGATCCCTCTGAGACAAGTCTTTGCAGG +
Preference number: 3 (lower is better)
Translates to: RRDLPEQLGEPS*FPDPSETSLCR
Trigger: CCTGCAAAGACTTGTCTCAGAGGGATCCGGGAACCAAGATGGCTCCCCTAGTTGCTCAGGCAAATCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp GGACCCTTGAGCTCTCTCACACACTGTGCCACCACCTaGGCACATACACCAGCTGATAAAAGGCCTCCAACA +
Preference number: 3 (lower is better)
Translates to: GPLSSLTHCATT*AHTPADKRPPT
Trigger: TGTTGGAGGCCTTTTATCAGCTGGTGTATGTGCCCAGGTGGTGGCACAGTGTGTGAGAGAGCTCAAGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp ACAGCTTCTGGGACAGGCCTTGTTTCGGGCCTGCATCTTCTGCCAGGAGGCAGGCAACTCCTCAGAAAATaGGACATTGTACTACCGGAG +
Preference number: 3 (lower is better)
Translates to: TASGTGLVSGLHLLPGGRQLLRK*DIVLPE
Trigger: CTCCGGTAGTACAATGTCCAATTTTCTGAGGAGTTG...CCTGCCTCCTGGCAGAAGATGCAGGCCCGAAACAAGGCCTGTCCCAGAAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp GCCACAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTTGGGCACAGAGTCGTCCTTAGCAAGACCTaGGGCTTGGAATTCAGTACT +
Preference number: 3 (lower is better)
Translates to: ATNPFQSAAALGHLGHRVVLSKT*GLEFST
Trigger: AGTACTGAATTCCAAGCCCAAGGTCTTGCTAAGGAC...GACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp GAGGCTGTACCGGGACCTAGCAAACACAGAAGTGGATaGTTACAGTCAGCTATTGTCTGGATCACAGGGCCC +
Preference number: 3 (lower is better)
Translates to: EAVPGPSKHRSG*LQSAIVWITGP
Trigger: GGGCCCTGTGATCCAGACAATAGCTGACTGTAAGCATCCACTTCTGTGTTTGCTAGGTCCCGGTACAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp GTGGGACCTGAGACAGCATTAGGGAAGCAGAAAACCTaGCCTGACCAGGGTCAAAAGTCCCTTTCAGTTGGC +
Preference number: 3 (lower is better)
Translates to: VGPETALGKQKT*PDQGQKSLSVG
Trigger: GCCAACTGAAAGGGACTTTTGACCCTGGTCAGGCCAGGTTTTCTGCTTCCCTAATGCTGTCTCAGGTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp CCACTCCCATACCCACCCACTCCCACTTCTTGGTCCTaGTGTTCCCCTGTACTGAGGCATATAAAGTGTGCA +
Preference number: 3 (lower is better)
Translates to: PLPYPPTPTSWS*CSPVLRHIKCA
Trigger: TGCACACTTTATATGCCTCAGTACAGGGGAACACCAGGACCAAGAAGTGGGAGTGGGTGGGTATGGGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp TTGCTGCAAGAGGAGAGCTGGCCTGCAGAGAGTGTCTaGCCACTGAAACACAGGAGAAATCTAGTCTCCCAG +
Preference number: 3 (lower is better)
Translates to: LLQEESWPAESV*PLKHRRNLVSQ
Trigger: CTGGGAGACTAGATTTCTCCTGTGTTTCAGTGGTCAGACACTCTCTGCAGGCCAGCTCTCCTCTTGCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp GACCAGTACCGGCCTCCCAGAGCTCATGTCTCTAGCTaGATATGTATCAGAAGATGGCCTAGTCAGCCATCA +
Preference number: 3 (lower is better)
Translates to: DQYRPPRAHVSS*ICIRRWPSQPS
Trigger: TGATGGCTGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACATGAGCTCTGGGAGGCCGGTACTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp ACCAGATTTGAGGGGCACCTGTTATCCCAAATGGAGTaGCCTCCAAAAGCATTGTCACTCCACCCACCAAGC +
Preference number: 3 (lower is better)
Translates to: TRFEGHLLSQME*PPKALSLHPPS
Trigger: GCTTGGTGGGTGGAGTGACAATGCTTTTGGAGGGCACTCCATTTGGGATAACAGGTGCCCCTCAAATCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp CAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAGTaGAGGACTGTTCCTGTTTCTCCACATCCTCGCCAG +
Preference number: 3 (lower is better)
Translates to: QSGCTSLQSHQQ*RTVPVSPHPRQ
Trigger: CTGGCGAGGATGTGGAGAAACAGGAACAGTCCTCCACTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp ACAGCTTCTGGGACAGGCCTTGTTTCGGGCCTGCATCTTCTGCCAGGAGGCAGGATGATAAGAGAGCATTaGACAAAATCCAACACCCAT +
Preference number: 3 (lower is better)
Translates to: TASGTGLVSGLHLLPGGRMIREH*TKSNTH
Trigger: ATGGGTGTTGGATTTTGTCAAATGCTCTCTTATCAT...CCTGCCTCCTGGCAGAAGATGCAGGCCCGAAACAAGGCCTGTCCCAGAAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp CTCACTAGAGGACACAGGGACAGCATCCTAATTAACTaGTACGCTCTCTGGTCGAGTCAACTGGACAAGCTG +
Preference number: 3 (lower is better)
Translates to: LTRGHRDSILIN*YALWSSQLDKL
Trigger: CAGCTTGTCCAGTTGACTCGACCAGAGAGCGTAGCAGTTAATTAGGATGCTGTCCCTGTGTCCTCTAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp GTCCTGGTGTTCCCCTGTACTGAGGCATATAAAGTGTaGAAGACCAATGGGCTTCTCTTTCCACTGATGGCC +
Preference number: 3 (lower is better)
Translates to: VLVFPCTEAYKV*KTNGLLFPLMA
Trigger: GGCCATCAGTGGAAAGAGAAGCCCATTGGTCTTGCACACTTTATATGCCTCAGTACAGGGGAACACCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp CACCTGGGCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTGCTACTAATCCTTTCTTaGTCCTCAGAAAAGAGGAGG +
Preference number: 3 (lower is better)
Translates to: HLGMESADTCNVPREQLLLLILS*SSEKRR
Trigger: CCTCCTCTTTTCTGAGGACAAAGAAAGGATTAGTAG...CAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp CACCTGGGCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTGAGTTCCTTCCGATCTTaGCATTTTCATTCCTCTGTT +
Preference number: 3 (lower is better)
Translates to: HLGMESADTCNVPREQLLSSFRS*HFHSSV
Trigger: AACAGAGGAATGAAAATGCAAAGATCGGAAGGAACT...CAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCAGTGGGGATGGCCTCTaGGAGACAGGGGAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: RGKVSTLWSSFFLSFMYFSGDGL*ETGEEK
Trigger: TTTCTCCTCCCCTGTCTCCAAGAGGCCATCCCCACT...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp AACACAACTTCTGTTCCATTCCAATCGCACTGGACCTaGGACAGCATTAGAGAAGCAGAAAACTCGGCCTGG +
Preference number: 3 (lower is better)
Translates to: NTTSVPFQSHWT*DSIREAENSAW
Trigger: CCAGGCCGAGTTTTCTGCTTCTCTAATGCTGTCTCAGGTCCAGTGCGATTGGAATGGAACAGAAGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp GGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTaGAAGCTTGTACAACCACTCTGGAAATCAGTCTGC +
Preference number: 3 (lower is better)
Translates to: GERGTLLHCWWD*KLVQPLWKSVC
Trigger: GCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp TGGACAGATGCTATACAGACACAGAGAGAACCCAAATaGCAGCCCAGGCTACTATACCCAGCCAAACTTTCA +
Preference number: 3 (lower is better)
Translates to: WTDAIQTQREPK*QPRLLYPAKLS
Trigger: TGAAAGTTTGGCTGGGTATAGTAGCCTGGGCTGGCATTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp CCATCTTGGTTCCCGGATCCCTCTGAGACAAGTCTTTaGAGGTTAGAGTGTGAACTACAGAAGCTAACAGCT +
Preference number: 3 (lower is better)
Translates to: PSWFPDPSETSL*RLECELQKLTA
Trigger: AGCTGTTAGCTTCTGTAGTTCACACTCTAACCTGCAAAGACTTGTCTCAGAGGGATCCGGGAACCAAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp AGAGCTCATGTCTCTAGCTGCATATGTATCAGAAGATaGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCAT +
Preference number: 3 (lower is better)
Translates to: RAHVSSCICIRR*PSQPSLEREAH
Trigger: ATGGGCCTCTCTTTCCAGTGATGGCTGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACATGAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp ATAGTAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAACCAGCTTTGGCATaGCAAGTTGCAGTAGGACTA +
Preference number: 3 (lower is better)
Translates to: IVARSWKEPRCPSTEEWIQPALA*QVAVGL
Trigger: TAGTCCTACTGCAACTTGCAATGCCAAAGCTGGTTG...TATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATGCTTACAGTCAGCTATaGTCTGGATCACAGGGCCCC +
Preference number: 3 (lower is better)
Translates to: ESRSKIKIEACLTTGKLYAYSQL*SGSQGP
Trigger: GGGGCCCTGTGATCCAGACAATAGCTGACTGTAAGC...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp TTGCTAGTGTATGCAATGGTGTCTGCGTTTGGGAGCTaGTTATGGGATGGATCCCTGGATATGGCAATCACT +
Preference number: 3 (lower is better)
Translates to: LLVYAMVSAFGS*LWDGSLDMAIT
Trigger: AGTGATTGCCATATCCAGGGATCCATCCCATAATCAGCTCCCAAACGCAGACACCATTGCATACACTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp ACCAAAGACTATGAAAGCCAGAAGATCCTGGACAGATaGTATACAGACACAGAGAGAACCCAAATGCCAGCC +
Preference number: 3 (lower is better)
Translates to: TKDYESQKILDR*YTDTERTQMPA
Trigger: GGCTGGCATTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp CACTCTGGAAATCAGTCTGCCAACTCCTCAGAAAATTaGACATTGTACTACCGGAGGATCCTGCAATACCTC +
Preference number: 3 (lower is better)
Translates to: HSGNQSANSSEN*TLYYRRILQYL
Trigger: GAGGTATTGCAGGATCCTCCGGTAGTACAATGTCCAATTTTCTGAGGAGTTGGCAGACTGATTTCCAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp CAAGGTTGTGGAGAAAGAGGAACACTCCTCCATTGTTaGTGGGATTGCAAGCTTGTACAACCACTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: QGCGERGTLLHC*WDCKLVQPLWK
Trigger: TTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp AACAGTCCTAGTTCGTCCTTAGCAAGACCTTGGGCTTaGAATTCAGTACTGCCCCTGGTATTACACTATCTC +
Preference number: 3 (lower is better)
Translates to: NSPSSSLARPWA*NSVLPLVLHYL
Trigger: GAGATAGTGTAATACCAGGGGCAGTACTGAATTCCAAGCCCAAGGTCTTGCTAAGGACGAACTAGGACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp CGTTTGGAAGCTGATTATGAGATGGATCCCCAGGTATaGCAGTCTCTAGTTGGTCTATTCTTTCGTCTCAGC +
Preference number: 3 (lower is better)
Translates to: RLEADYEMDPQV*QSLVGLFFRLS
Trigger: GCTGAGACGAAAGAATAGACCAACTAGAGACTGCCATACCTGGGGATCCATCTCATAATCAGCTTCCAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp CGTCTCAAGGATAAAAGAGCCTCTGGTGGAATCACCATGTCTGACCTAAAGCTGGTATATCAACCAGCTTaGGCATTGCAAGTTGCAGTA +
Preference number: 3 (lower is better)
Translates to: RLKDKRASGGITMSDLKLVYQPA*ALQVAV
Trigger: TACTGCAACTTGCAATGCCAAAGCTGGTTGATATAC...CAGCTTTAGGTCAGACATGGTGATTCCACCAGAGGCTCTTTTATCCTTGAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTGATATCTCTGCACCTTaGCTGCAAGAGGAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: ISEYTSCEFFCDWVTSLSDISAP*LQEESW
Trigger: CCAGCTCTCCTCTTGCAGCAAAGGTGCAGAGATATC...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATAGCAAACCTGGACCCTaGAGCTCTCTCACACACTGT +
Preference number: 3 (lower is better)
Translates to: ESRSKIKIEACLTTGKLYSKPGP*SSLTHC
Trigger: ACAGTGTGTGAGAGAGCTCAAGGGTCCAGGTTTGCT...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp TTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCTaGGTTTGGGAGCTGATTATGGGATGGATCCCTGGA +
Preference number: 3 (lower is better)
Translates to: FQQNLASVCNGV*VWELIMGWIPG
Trigger: TCCAGGGATCCATCCCATAATCAGCTCCCAAACGCAGACACCATTGCATACACTAGCAAGATTTTGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp CAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTaGAGCCAAGATGAAAGGATGGGCCATCTGAAGACT +
Preference number: 3 (lower is better)
Translates to: QNTHGRSYRDKV*SQDERMGHLKT
Trigger: AGTCTTCAGATGGCCCATCCTTTCATCTTGGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp CATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTaGAAATCAGTCTGCCAACTCCTCAGAAAATTGGAC +
Preference number: 3 (lower is better)
Translates to: HCWWDCKLVQPL*KSVCQLLRKLD
Trigger: GTCCAATTTTCTGAGGAGTTGGCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp ATGGCTAAGATAAACAATTCTGGTGACAGCAGATGCTaGCAAGGTTGTGGAGAAAGAGGAACACTCCTCCAT +
Preference number: 3 (lower is better)
Translates to: MAKINNSGDSRC*QGCGERGTLLH
Trigger: ATGGAGGAGTGTTCCTCTTTCTCCACAACCTTGCCAGCATCTGCTGTCACCAGAATTGTTTATCTTAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp CAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTaGAAGCTGATTATGAGATGGATCCCCAGGTATGGC +
Preference number: 3 (lower is better)
Translates to: QNLASVCNGVSV*KLIMRWIPRYG
Trigger: GCCATACCTGGGGATCCATCTCATAATCAGCTTCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp GAGACAAGTCTTTGCAGGTTAGAGTGTGAACTACAGAAGCTAACAGCTTCTGGGGGAAAGAGAGGCCCATaGGTCTTGCAAACTTTATAT +
Preference number: 3 (lower is better)
Translates to: ETSLCRLECELQKLTASGGKRGP*VLQTLY
Trigger: ATATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCC...CCCAGAAGCTGTTAGCTTCTGTAGTTCACACTCTAACCTGCAAAGACTTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp TGGAAGGAGTTACAGAGACAAAGTTTGGAGCCAAGATaGAAGGATGGGCCATCTGAAGACTGCCTTATGAAT +
Preference number: 3 (lower is better)
Translates to: WKELQRQSLEPR*KDGPSEDCLMN
Trigger: ATTCATAAGGCAGTCTTCAGATGGCCCATCCTTTCATCTTGGCTCCAAACTTTGTCTCTGTAACTCCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp CTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGTaGGAACCTGGAAGCATTCCCACTAAAATCTGGGAC +
Preference number: 3 (lower is better)
Translates to: LQQTSSQHQSKW*EPGSIPTKIWD
Trigger: GTCCCAGATTTTAGTGGGAATGCTTCCAGGTTCTCACCATTTACTTTGATGTTGGCTACTGGTTTGCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp CAATTGCTCTGTAGTACAGCTTTAGGTCAGGCATGGTaGTTCCACCAGAGGTTCTTTAATCCTTCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: QLLCSTALGQAW*FHQRFFNPSEE
Trigger: CTCTTCTGAAGGATTAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTGTACTACAGAGCAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp TGTCCTTCTTACCAGTTGGAAAATCTTCTGGATATATaGCCAGGAGAGGTATTGTTGGATCCTCGGGTAGTA +
Preference number: 3 (lower is better)
Translates to: CPSYQLENLLDI*PGEVLLDPRVV
Trigger: TACTACCCGAGGATCCAACAATACCTCTCCTGGGCATATATCCAGAAGATTTTCCAACTGGTAAGAAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp GCATATGTATCAGAAGATGGCCTAGTCAGCCATCACTaGAAAGAGAGGCCCATTGGTCTTGCAAACTTTATA +
Preference number: 3 (lower is better)
Translates to: AYVSEDGLVSHH*KERPIGLANFI
Trigger: TATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCAGTGATGGCTGACTAGGCCATCTTCTGATACATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp CTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATaGAAGGAGTTACAGAGACAAAGTTTGGAGCCAAGA +
Preference number: 3 (lower is better)
Translates to: LCPFLELGTKHP*KELQRQSLEPR
Trigger: TCTTGGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTaGGTTACCTCACTCAGTATGATGCCCTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: ISEYTSCEFFCD*VTSLSMMPSMS
Trigger: GGACATGGAGGGCATCATACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp GAATTCAGTACTGCCCCTGGTATTACACTATCTCTTTaGGTAAAAGTTAGGTCACTGCCCTTCACAGGAATC +
Preference number: 3 (lower is better)
Translates to: EFSTAPGITLSL*VKVRSLPFTGI
Trigger: GATTCCTGTGAAGGGCAGTGACCTAACTTTTACTCAAAGAGATAGTGTAATACCAGGGGCAGTACTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp CTTCTTCTCAGCATCTCACAGAACCTTCTCCAAAATTaGCCACATAATTGGTCACAAAACAGGCCTCAACAG +
Preference number: 3 (lower is better)
Translates to: LLLSISQNLLQN*PHNWSQNRPQQ
Trigger: CTGTTGAGGCCTGTTTTGTGACCAATTATGTGGTCAATTTTGGAGAAGGTTCTGTGAGATGCTGAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp TTGTTGGATCCTCGGGTAGTAATATGTCCAATTTTCTaGGAAGGCACCAGACTGATTTCCAGAGTGGTTGTA +
Preference number: 3 (lower is better)
Translates to: LLDPRVVICPIF*EGTRLISRVVV
Trigger: TACAACCACTCTGGAAATCAGTCTGGTGCCTTCTCAGAAAATTGGACATATTACTACCCGAGGATCCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp GTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTATaGTGCCCTCCATGTCCATCCATTTGCCTAAGAATT +
Preference number: 3 (lower is better)
Translates to: VSSFVIGLPHSV*CPPCPSICLRI
Trigger: AATTCTTAGGCAAATGGATGGACATGGAGGGCATCATACTGAGTGAGGTAACCCAATCACAAAAGAACTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp AATTACATTCAGATTCTACACAAAACCTCTCCTGTGTaGATCTGTCTGTTATTCATCCACGCTTTGCCCACC +
Preference number: 3 (lower is better)
Translates to: NYIQILHKTSPV*ICLLFIHALPT
Trigger: GGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAGAGGTTTTGTGTAGAATCTGAATGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp CAACAGAAAACAAGAGATAGAAGGGAGAATCTCAGGTaGAGAAGATTCCATAGGGAACATGGGCACAACAAT +
Preference number: 3 (lower is better)
Translates to: QQKTRDRRENLR*RRFHREHGHNN
Trigger: ATTGTTGTGCCCATGTTCCCTATGGAATCTTCTGCACCTGAGATTCTCCCTTCTATCTCTTGTTTTCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp GCAATGGCTTGTGCTGTTAGATCCAGAATCGACAAATaGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCA +
Preference number: 3 (lower is better)
Translates to: AMACAVRSRIDK*DLIKLQSFCKA
Trigger: TGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTGGATCTAACAGCACAAGCCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp ACATTTTCTGTATCCATACCTCTGTTGAGGGGCATCTaGGTTCTTTCCAGCTTCTGGCTATTACAAATAAGG +
Preference number: 3 (lower is better)
Translates to: TFSVSIPLLRGI*VLSSFWLLQIR
Trigger: CCTTATTTGTAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGTATGGATACAGAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCTGCCAGCACCATTTGTaGAAAATGCTCTCTGTTTTC +
Preference number: 3 (lower is better)
Translates to: RGKVSTLWSSFFLSFMYFCQHHL*KMLSVF
Trigger: GAAAACAGAGAGCATTTTCAACAAATGGTGCTGGCA...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp GCATGTAGCCTCAGCACAGAACTCGAGAATACTGCCTaGTTCTTGGTACTTACTGTATTTAAGTTACAGCTT +
Preference number: 3 (lower is better)
Translates to: ACSLSTELENTA*FLVLTVFKLQL
Trigger: AAGCTGTAACTTAAATACAGTAAGTACCAAGAATCAGGCAGTATTCTCGAGTTCTGTGCTGAGGCTACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp GTGAAGTTTTTAAGTCCAAAGGGCCTCTCTTTCCAGTaGTGGCTGATTAGGCCATCTTTTGATACATATGCA +
Preference number: 3 (lower is better)
Translates to: VKFLSPKGLSFQ*WLIRPSFDTYA
Trigger: TGCATATGTATCAAAAGATGGCCTAATCAGCCATCACTGGAAAGAGAGGCCCTTTGGACTTAAAAACTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp GATAGCCAATTTTACTATATTGATCCTGCCAATCCATaGGCATGGGAGGTCTTTCCATCTTCTGAGATCTTC +
Preference number: 3 (lower is better)
Translates to: DSQFYYIDPANP*AWEVFPSSEIF
Trigger: GAAGATCTCAGAAGATGGAAAGACCTCCCATGCTCATGGATTGGCAGGATCAATATAGTAAAATTGGCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp TACATGATAACTGCCAGTTGTGCCAGCACCATTTGTTaGAAATGCTCTCTGTTTTCCACTGGAAGGTTTTTG +
Preference number: 3 (lower is better)
Translates to: YMITASCASTIC*KCSLFSTGRFL
Trigger: CAAAAACCTTCCAGTGGAAAACAGAGAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp GGCCTCAACAGATACAAAAATATTGAAATTGTCCCATaGATCCTATCAGATCACCATGGACTAAGGCTGATC +
Preference number: 3 (lower is better)
Translates to: GLNRYKNIEIVP*ILSDHHGLRLI
Trigger: GATCAGCCTTAGTCCATGGTGATCTGATAGGATGCATGGGACAATTTCAATATTTTTGTATCTGTTGAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp ACTATGGAGAGCAGGTCTAAGATAAAAATAGAGGCTTaGCTAACCACAGGTAAACTCTATAACCTCAGACGA +
Preference number: 3 (lower is better)
Translates to: TMESRSKIKIEA*LTTGKLYNLRR
Trigger: TCGTCTGAGGTTATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTCCATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp CCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATaGAGTTTTTATCACAATTGCTCTGTAGTACAGCTT +
Preference number: 3 (lower is better)
Translates to: PLVYLSVAIPVP*SFYHNCSVVQL
Trigger: AAGCTGTACTACAGAGCAATTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp GATTTTTCACCAAAGACTATGAAAGCCAGAAGATCCTaGACAGATGCTATACAGACACAGAGAGAACCCAAA +
Preference number: 3 (lower is better)
Translates to: DFSPKTMKARRS*TDAIQTQREPK
Trigger: TTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp GCCTCAGCACAGAACTCGAGAATACTGCCTGATTCTTaGTACTTACTGTATTTAAGTTACAGCTTACACAGT +
Preference number: 3 (lower is better)
Translates to: ASAQNSRILPDS*YLLYLSYSLHS
Trigger: ACTGTGTAAGCTGTAACTTAAATACAGTAAGTACCAAGAATCAGGCAGTATTCTCGAGTTCTGTGCTGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAAGAGGCCCATTGGTCTaGCAAACTTTATATGTCTCA +
Preference number: 3 (lower is better)
Translates to: SVSTHHVSSFVIGLPHSVRGPLV*QTLYVS
Trigger: TGAGACATATAAAGTTTGCAAGACCAATGGGCCTCT...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATACACAACCCAACATTTaGCTGTTTACAGAAAACCCA +
Preference number: 3 (lower is better)
Translates to: FTFSFRKLACSLSTELENTQPNI*LFTENP
Trigger: TGGGTTTTCTGTAAACAGCAAAATGTTGGGTTGTGT...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTCACTGTGCTCTCTCCTaGGGCTTATTTGAAAATTTT +
Preference number: 3 (lower is better)
Translates to: ISEYTSCEFFCDWVTSLSHCALS*GLFENF
Trigger: AAAATTTTCAAATAAGCCCAAGGAGAGAGCACAGTG...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp TGGTCACAAAACAGGCCTCAACAGATACAAAAATATTaGAATTGTCCCATGCATCCTATCAGATCACCATGG +
Preference number: 3 (lower is better)
Translates to: WSQNRPQQIQKY*NCPMHPIRSPW
Trigger: CCATGGTGATCTGATAGGATGCATGGGACAATTTCAATATTTTTGTATCTGTTGAGGCCTGTTTTGTGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp CCACAGGAAATAAATAGCTTTCTGTACATGAGTTGCTaGGCCCTTTCACATTCTCTTTTAGAAAACTGGCAT +
Preference number: 3 (lower is better)
Translates to: PQEINSFLYMSC*ALSHSLLENWH
Trigger: ATGCCAGTTTTCTAAAAGAGAATGTGAAAGGGCCCAGCAACTCATGTACAGAAAGCTATTTATTTCCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTTACTTCATTTGTACCTaGCAAGTATGTCACCCAACT +
Preference number: 3 (lower is better)
Translates to: SSKFCLCNSFNGCFVPISYFICT*QVCHPT
Trigger: AGTTGGGTGACATACTTGCAAGGTACAAATGAAGTA...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR-3UTR CAA 90 bp AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTATCCGGTTACTTCATTaGTACCTTGCAAGTATGTCA +
Preference number: 3 (lower is better)
Translates to: SSKFCLCNSFNGCFVPISIRLLH*YLASMS
Trigger: TGACATACTTGCAAGGTACAAATGAAGTAACCGGAT...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp CTATCAGAATTACACCAGATTTTTCACCAAAGACTATaGAAGCCAGAAGATCCTGGACAGATGCTATACAGA +
Preference number: 3 (lower is better)
Translates to: LSELHQIFHQRL*KPEDPGQMLYR
Trigger: TCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAAAATCTGGTGTAATTCTGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp TTATTCCTATCTCCCTGTACTAAGGTCAAATCTAAGTaGATTAAGGAACTCCACATAAAACCAGAGAGAGTG +
Preference number: 3 (lower is better)
Translates to: LFLSPCTKVKSK*IKELHIKPERV
Trigger: CACTCTCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAGTACAGGGAGATAGGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTaGTATAGTGACAGACAAGTAGACCAATGGGATAGA +
Preference number: 3 (lower is better)
Translates to: YYRAIVIKTAWY*YSDRQVDQWDR
Trigger: TCTATCCCATTGGTCTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp TTGGTACTTACTGTATTTAAGTTACAGCTTACACAGTaGCAGTTTGGACCACTTACTCTAAAGACAGGCTTT +
Preference number: 3 (lower is better)
Translates to: LVLTVFKLQLTQ*QFGPLTLKTGF
Trigger: AAAGCCTGTCTTTAGAGTAAGTGGTCCAAACTGCCACTGTGTAAGCTGTAACTTAAATACAGTAAGTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR GCA 72 bp TATCCAGAAGATGTTCCAACCAGTAAGAAGGACACATaGTCCACTATGTTCATATCAGCCTTATTTATAGTA +
Preference number: 3 (lower is better)
Translates to: YPEDVPTSKKDT*STMFISALFIV
Trigger: TACTATAAATAAGGCTGATATGAACATAGTGGAGCATGTGTCCTTCTTACTGGTTGGAACATCTTCTGGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp TTTTCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTaGTTTAAGTGGAGTTCCTTAATCCACTTAGATTTG +
Preference number: 3 (lower is better)
Translates to: FSHFLLYKFQCL*FKWSSLIHLDL
Trigger: CAAATCTAAGTGGATTAAGGAACTCCACTTAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR TCA 72 bp GAACCAATAAGAGGTGATAAAAGAATCAGGGATGACTaGAATAGTGAAATATTATCACACTATGGAGAGCAG +
Preference number: 3 (lower is better)
Translates to: EPIRGDKRIRDD*NSEILSHYGEQ
Trigger: CTGCTCTCCATAGTGTGATAATATTTCACTATTTCAGTCATCCCTGATTCTTTTATCACCTCTTATTGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp GCTACTATACCCAGCCAAACTTTCAATTACTATAGATaGAGAAAGCAAAGTATTCCACGACAAAACCAAATT +
Preference number: 3 (lower is better)
Translates to: ATIPSQTFNYYR*RKQSIPRQNQI
Trigger: AATTTGGTTTTGTCGTGGAATACTTTGCTTTCTCCATCTATAGTAATTGAAAGTTTGGCTGGGTATAGTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTAAGTaGAGTTCCTTAATCCACTTAGATTTGACCTTAGTA +
Preference number: 3 (lower is better)
Translates to: FLLYKFQCLWFK*SSLIHLDLTLV
Trigger: TACTAAGGTCAAATCTAAGTGGATTAAGGAACTCCACTTAAACCAGAGACACTGAAACTTATAGAGGAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CCA 72 bp AATAACAACATAAATAATGGAAAGCCAACATTCACGTaGAAACTGAACAACAGTCTTCTCAATGATACCTTG +
Preference number: 3 (lower is better)
Translates to: NNNINNGKPTFT*KLNNSLLNDTL
Trigger: CAAGGTATCATTGAGAAGACTGTTGTTCAGTTTCCACGTGAATGTTGGCTTTCCATTATTTATGTTGTTATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CGGTCAGCGCCAGCACCAGGTCACCTGGGCACAAAGTaGGCAGACACCCCCAAGGTCCCTAGAGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: RSAPAPGHLGTK*ADTPKVPRGLS
Trigger: GGAGAGTCCTCTAGGGACCTTGGGGGTGTCTGCCAACTTTGTGCCCAGGTGACCTGGTGCTGGCGCTGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp ATGTTACAGTCTCCACTCTGGCAACCTGTGCCCCTCTaGCCTCCCTCCCTGCATGTTGGGGGACAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: MLQSPLWQPVPL*PPSLHVGGQGP
Trigger: GGGCCCTTGTCCCCCAACATGCAGGGAGGGAGGCAAGAGGGGCACAGGTTGCCAGAGTGGAGACTGTAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTaGGGCACAGAGTCAGCAGACTCCTCCAAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QIPSSLQQHWVT*GTESADSSKVP
Trigger: AGGGACCTTGGAGGAGTCTGCTGACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp AAACCTGGCCTGACCAGGGTCAAAAGTCCCTTTCAGTaGGCACCAGCACCTGGTCACCTGGTCACCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KPGLTRVKSPFQ*APAPGHLVTWS
Trigger: TGACCAGGTGACCAGGTGACCAGGTGCTGGTGCCAACTGAAAGGGACTTTTGACCCTGGTCAGGCCAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CCTCGCCCCACTCCCATACCCACCCACTCCCACTTCTaGGTCCTGGTGTTCCCCTGTACTGAGGCATATAAA +
Preference number: 4 (lower is better)
Translates to: PRPTPIPTHSHF*VLVFPCTEAYK
Trigger: TTTATATGCCTCAGTACAGGGGAACACCAGGACCAAGAAGTGGGAGTGGGTGGGTATGGGAGTGGGGCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp TCTCCTGTGTGCATCTGTCTGTTATTCATCCACGCTTaGCCCACCCGCATCGAGAGACCCCATTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: SPVCICLLFIHA*PTRIERPHSTQ
Trigger: CTGCGTGGAATGGGGTCTCTCGATGCGGGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CAGGAGGCAGGTCCGAATGTAGATATCTCTGCACCTTaGCTGCAAGAGGAGAGCTGGCCTGCAGAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: QEAGPNVDISAP*LQEESWPAESV
Trigger: GACACTCTCTGCAGGCCAGCTCTCCTCTTGCAGCAAAGGTGCAGAGATATCTACATTCGGACCTGCCTCCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CATAGAATGACCAGCAGTCTCAGCAAACCTGGACCCTaGAGCTCTCTCACACACTGTGCCACCACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HRMTSSLSKPGP*SSLTHCATTWA
Trigger: TGCCCAGGTGGTGGCACAGTGTGTGAGAGAGCTCAAGGGTCCAGGTTTGCTGAGACTGCTGGTCATTCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
CDS-3UTR TCA 90 bp GCCACAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTTGGGCACAGAGTCTTTAGAGGAACCACCTaGAGAATGTTTTTGCACACT +
Preference number: 4 (lower is better)
Translates to: ATNPFQSAAALGHLGHRVFRGTT*RMFLHT
Trigger: AGTGTGCAAAAACATTCTTCAGGTGGTTCCTCTAAA...GACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp GAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTaGTACAACCACTCTGGAAATCAGTCTGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: EEHSSIVGGIAS*YNHSGNQSANS
Trigger: GGAGTTGGCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CTGGCAAGGTTGTGGAGAAAGAGGAACACTCCTCCATaGTTGGTGGGATTGCAAGCTTGTACAACCACTCTG +
Preference number: 4 (lower is better)
Translates to: LARLWRKRNTPP*LVGLQACTTTL
Trigger: CAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
CDS-3UTR TCA 90 bp CGTCTCAAGGATAAAAGAGCCTCTGGTGGAATCACCATGTCTGACCTAAAGCTGCACCCAGGCAGTCACTaGAAACAAGATGCATGTCCT +
Preference number: 4 (lower is better)
Translates to: RLKDKRASGGITMSDLKLHPGSH*KQDACP
Trigger: AGGACATGCATCTTGTTTTCAGTGACTGCCTGGGTG...CAGCTTTAGGTCAGACATGGTGATTCCACCAGAGGCTCTTTTATCCTTGAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp GCAAGGTTGTGGAGAAAGAGGAACACTCCTCCATTGTaGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: ARLWRKRNTPPL*VGLQACTTTLE
Trigger: TTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CCACTCTGGAAATCAGTCTGCCAACTCCTCAGAAAATaGGACATTGTACTACCGGAGGATCCTGCAATACCT +
Preference number: 4 (lower is better)
Translates to: PLWKSVCQLLRK*DIVLPEDPAIP
Trigger: AGGTATTGCAGGATCCTCCGGTAGTACAATGTCCAATTTTCTGAGGAGTTGGCAGACTGATTTCCAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp TGTTACACCTATAAGGTTTCAGATCCCTCCAACTCCTaGAGTACTTTCTCTAGCTCCTCCATTGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: CYTYKVSDPSNS*STFSSSSIGGH
Trigger: ATGGCCCCCAATGGAGGAGCTAGAGAAAGTACTCAAGGAGTTGGAGGGATCTGAAACCTTATAGGTGTAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp AAGACACAGCTATATCTGGGTCCTTTCAGCAAAATCTaGCTAGTGTATGCAATGGTGTCTGCGTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KTQLYLGPFSKI*LVYAMVSAFGS
Trigger: GCTCCCAAACGCAGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
CDS-3UTR CCA 90 bp CGTCTCAAGGATAAAAGAGCCTCTGGTGGAATCACCATGTCTGACCTAAAGCTGGTGTGTCGAAGGAGATaGCCAGGTATAGAAAAATAT +
Preference number: 4 (lower is better)
Translates to: RLKDKRASGGITMSDLKLVCRRR*PGIEKY
Trigger: ATATTTTTCTATACCTGGCCATCTCCTTCGACACAC...CAGCTTTAGGTCAGACATGGTGATTCCACCAGAGGCTCTTTTATCCTTGAGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTaGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: PNFVSVTPSMGV*FPILRRGKVST
Trigger: TGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp AAGAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTaGCTAGTGTATGCAATGGTGTCAGCGTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KRQLYQGPFSKI*LVYAMVSAFGS
Trigger: GCTTCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACCCTGATATAGCTGTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
CDS-3UTR TCA 90 bp TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATTACTCCAAGAGTTGGTaGGTCCCAGGAACACAAACT +
Preference number: 4 (lower is better)
Translates to: FTFSFRKLACSLSTELENYSKSW*VPGTQT
Trigger: AGTTTGTGTTCCTGGGACTCACCAACTCTTGGAGTA...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp TCATCTCACACACAACCCCATCTACTAATCCTTTCTTaGTCCTCAGAAAAGAGGAGGCCTCCTAAGTATATC +
Preference number: 4 (lower is better)
Translates to: SSHTQPHLLILS*SSEKRRPPKYI
Trigger: GATATACTTAGGAGGCCTCCTCTTTTCTGAGGACAAAGAAAGGATTAGTAGATGGGGTTGTGTGTGAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp ATCCATCCCATAATCAGCCTCCAAAAGCTCACACAATaGCATACACTAGCAAGGTTTTGCTTAAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: IHPIISLQKLTQ*HTLARFCLKDP
Trigger: TGGGTCCTTTAAGCAAAACCTTGCTAGTGTATGCAATTGTGTGAGCTTTTGGAGGCTGATTATGGGATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp AAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTaGCCCCTTCTTAGAATTGGGAACAAAACACCCATG +
Preference number: 4 (lower is better)
Translates to: KLKKNEDQSVDT*PLLRIGNKTPM
Trigger: CATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp GTTAGATCCAGAATCGACAAATGGGACCTCATAAAATaGCAAAGCTTCTGTAAGGCAAGAGACACCACTGTC +
Preference number: 4 (lower is better)
Translates to: VRSRIDKWDLIK*QSFCKARDTTV
Trigger: GACAGTGGTGTCTCTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTGGATCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CTGTTTCTTTCTAATCACTTGGGACCTGAGATAGCATaGAGTGGAACACAACTTCTGTTCCATTCCAATCGC +
Preference number: 4 (lower is better)
Translates to: LFLSNHLGPEIA*SGTQLLFHSNR
Trigger: GCGATTGGAATGGAACAGAAGTTGTGTTCCACTCAATGCTATCTCAGGTCCCAAGTGATTAGAAAGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTaGTTCCCATTTCTAGGAAGGGGCAAAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: PNFVSVTPSMGV*FPFLGRGKVST
Trigger: TGTGGACACTTTGCCCCTTCCTAGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CTTCTACATGATAACTGCCAGTTGTGCCAGCACCATTaGTTGAAAATGCTCTCTGTTTTCCACTGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LLHDNCQLCQHH*LKMLSVFHWKV
Trigger: AACCTTCCAGTGGAAAACAGAGAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp GTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTaGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCGC +
Preference number: 4 (lower is better)
Translates to: VPNSKKGQSVHT*VFVLLEFHVFR
Trigger: GCGAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp GTTCCCATTTCTAGGAAGGGGCAAAGTGTCCACACTTaGGTCTTCATTCTTCTTGAGTTTCATGAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: VPISRKGQSVHT*VFILLEFHEFN
Trigger: GTTAAACTCATGAAACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCCTAGAAATGGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CTACATGATAACTGCCAGTTGTGCCAGCACCATTTGTaGAAAATGCTCTCTGTTTTCCACTGGAAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LHDNCQLCQHHL*KMLSVFHWKVF
Trigger: AAAAACCTTCCAGTGGAAAACAGAGAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp GGATCAATTCGCATTCTTCTACATGATAACTGCCAGTaGTGCCAGCACCATTTGTTGAAAATGCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GSIRILLHDNCQ*CQHHLLKMLSV
Trigger: AACAGAGAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGTAGAAGAATGCGAATTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
CDS-3UTR TCA 90 bp TGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGTCTCAGTAAAGGGGAAACTACAAAAGCCAGTTaGATCAGAGAATGCATAAGG +
Preference number: 4 (lower is better)
Translates to: WKERPIGLANFICLSKGETTKAS*IRECIR
Trigger: CCTTATGCATTCTCTGATTCAACTGGCTTTTGTAGT...TTCCCCTTTACTGAGACATATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CTATTCTATTCCAATCGCGTGGAACCTGAGACAATATaGAGTGAAACACAACTTCTGTTCCATTCCAATCAC +
Preference number: 4 (lower is better)
Translates to: LFYSNRVEPETI*SETQLLFHSNH
Trigger: GTGATTGGAATGGAACAGAAGTTGTGTTTCACTCAATATTGTCTCAGGTTCCACGCGATTGGAATAGAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp GTGAGTGTAACACAACTTCTGTTTCTTTCTAATCACTaGGGACCTGAGATAGCATTGAGTGGAACACAACTT +
Preference number: 4 (lower is better)
Translates to: VSVTQLLFLSNH*GPEIALSGTQL
Trigger: AAGTTGTGTTCCACTCAATGCTATCTCAGGTCCCAAGTGATTAGAAAGAAACAGAAGTTGTGTTACACTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp GCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTaGTTGATTCTTGATCTTACAGCACAAGCCATTGGA +
Preference number: 4 (lower is better)
Translates to: ALQKLCNFMRSH*LILDLTAQAIG
Trigger: TCCAATGGCTTGTGCTGTAAGATCAAGAATCAACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp TTGGAAAATCTTCTGGATATATGCCCAGGAGAGGTATaGTTGGATCCTCGGGTAGTAATATGTCCAATTTTC +
Preference number: 4 (lower is better)
Translates to: LENLLDICPGEV*LDPRVVICPIF
Trigger: GAAAATTGGACATATTACTACCCGAGGATCCAACAATACCTCTCCTGGGCATATATCCAGAAGATTTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp CATTTCTGGGTCTACAATTCTATTCCATTGGTCTACTaGTCTGTCGCTATACCAGTTCCATGCAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: HFWVYNSIPLVY*SVAIPVPCSFY
Trigger: ATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGAATAGAATTGTAGACCCAGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp ACCTTAGATATGGCTGACTTTGTCTCAATTATTTTATaGCCTAGTTCCTTCCGATCTTTGCATTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: TLDMADFVSIIL*PSSFRSLHFHS
Trigger: GGAATGAAAATGCAAAGATCGGAAGGAACTAGGCAATAAAATAATTGAGACAAAGTCAGCCATATCTAAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
3UTR CAA 72 bp GTCTCAATTATTTTATTGCCTAGTTCCTTCCGATCTTaGCATTTTCATTCCTCTGTTCTCTGTAAGAATCAT +
Preference number: 4 (lower is better)
Translates to: VSIILLPSSFRS*HFHSSVLCKNH
Trigger: ATGATTCTTACAGAGAACAGAGGAATGAAAATGCAAAGATCGGAAGGAACTAGGCAATAAAATAATTGAGAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
CDS-3UTR CAA 90 bp ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTTACTACAAAAGCCAGTaGAATCAGAGAATGCATAAG +
Preference number: 5 (lower is better)
Translates to: ISEYTSCEFFCDWVTSLSYYKSQ*NQRMHK
Trigger: CTTATGCATTCTCTGATTCAACTGGCTTTTGTAGTA...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099604.6
CDS TCA 72 bp CAGAGAATGCATAAGGCCAACCACCCAGGCAGTCACTaGAAACAAGATGCATGTCCTCGGGCTCATAATGGT +
Preference number: 6 (lower is better)
Translates to: QRMHKANHPGSH*KQDACPRAHNG
Trigger: ACCATTATGAGCCCGAGGACATGCATCTTGTTTTCAGTGACTGCCTGGGTGGTTGGCCTTATGCATTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099604.6
ENSMUST00000099606.2
CDS TCA 72 bp AGCAGAAAGGGTAGACAGGGCTTTAGAGGAACCACCTaGAGAATGTTTTTGCACACTGATTATGATAACAAT +
Preference number: 6 (lower is better)
Translates to: SRKGRQGFRGTT*RMFLHTDYDNN
Trigger: ATTGTTATCATAATCAGTGTGCAAAAACATTCTTCAGGTGGTTCCTCTAAAGCCCTGTCTACCCTTTCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099604.6
ENSMUST00000099606.2