Pregenerated sensors for OLFR1307 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094747Ensembl transcript IDs: ENSMUST00000099604.6, ENSMUST00000099606.2
Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AAGCAGAAAACTCGGCCTGGCCAGGGCCACAAATCCCTTCCAGTCTaGAGCAGCACTGGGTCACCTTGGGCACAGAGTCAGCAGACTCCT | + |
Preference number: 1 (lower is better) Translates to: KQKTRPGQGHKSLPV*SSTGSPWAQSQQTP Trigger: AGGAGTCTGCTGACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGCCCTGGCCAGGCCGAGTTTTCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | TGGCCTGACCAGGGTCAAAAGTCCCTTTCAGTTGGCACCAGCACCTaGTCACCTGGTCACCTGGTCACCTGGGCATGGAGTCTGCAGACA | + |
Preference number: 1 (lower is better) Translates to: WPDQGQKSLSVGTST*SPGHLVTWAWSLQT Trigger: TGTCTGCAGACTCCATGCCCAGGTGACCAGGTGACCAGGTGACCAGGTGCTGGTGCCAACTGAAAGGGACTTTTGACCCTGGTCAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 90 bp | GCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTaGGGCAGACCCCATTTCGGGCTCCAGACATCCAGGCACCTTCCC | + |
Preference number: 1 (lower is better) Translates to: AWSLQTPAMSLENSF*GRPHFGLQTSRHLP Trigger: GGGAAGGTGCCTGGATGTCTGGAGCCCGAAATGGGGTCTGCCTCAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | GTCACCTGGTCACCTGGTCACCTGGGCATGGAGTCTGCAGACACCTaGAATGTCCCTAGAGAACAGCTTCTGAGGCAGACCCCATTTCGG | + |
Preference number: 1 (lower is better) Translates to: VTWSPGHLGMESADT*NVPREQLLRQTPFR Trigger: CCGAAATGGGGTCTGCCTCAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTGACCAGGTGACCAGGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | GCCCTCGCCCCACTCCCATACCCACCCACTCCCACTTCTTGGTCCTaGTGTTCCCCTGTACTGAGGCATATAAAGTGTGCAAGACCAATG | + |
Preference number: 1 (lower is better) Translates to: ALAPLPYPPTPTSWS*CSPVLRHIKCARPM Trigger: CATTGGTCTTGCACACTTTATATGCCTCAGTACAGGGGAACACCAGGACCAAGAAGTGGGAGTGGGTGGGTATGGGAGTGGGGCGAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | GTCTCTGCTGAGGCTGTACCGGGACCTAGCAAACACAGAAGTGGATaGTTACAGTCAGCTATTGTCTGGATCACAGGGCCCCCAGTGGAG | + |
Preference number: 1 (lower is better) Translates to: VSAEAVPGPSKHRSG*LQSAIVWITGPPVE Trigger: CTCCACTGGGGGCCCTGTGATCCAGACAATAGCTGACTGTAAGCATCCACTTCTGTGTTTGCTAGGTCCCGGTACAGCCTCAGCAGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | TACAGTCTCCACTCTGGCAACCTGTGCCCCTCTTGCCTCCCTCCCTaGATGTTGGGGGACAAGGGCCCTCTGTACATTTGTAACTCTGAA | + |
Preference number: 1 (lower is better) Translates to: YSLHSGNLCPSCLPP*MLGDKGPLYICNSE Trigger: TTCAGAGTTACAAATGTACAGAGGGCCCTTGTCCCCCAACATGCAGGGAGGGAGGCAAGAGGGGCACAGGTTGCCAGAGTGGAGACTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | GCTCCACCCAGGAGGGATTTGCCTGAGCAACTAGGGGAGCCATCTTaGTTCCCGGATCCCTCTGAGACAAGTCTTTGCAGGTTAGAGTGT | + |
Preference number: 1 (lower is better) Translates to: APPRRDLPEQLGEPS*FPDPSETSLCRLEC Trigger: ACACTCTAACCTGCAAAGACTTGTCTCAGAGGGATCCGGGAACCAAGATGGCTCCCCTAGTTGCTCAGGCAAATCCCTCCTGGGTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | ACAAAACCTCTCCTGTGTGCATCTGTCTGTTATTCATCCACGCTTTaGCCACCCGCATCGAGAGACCCCATTCCACGCAGACACAGGGAC | + |
Preference number: 1 (lower is better) Translates to: TKPLLCASVCYSSTL*PPASRDPIPRRHRD Trigger: GTCCCTGTGTCTGCGTGGAATGGGGTCTCTCGATGCGGGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAGAGGTTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | TCCAATCACGTGGGACCTGAGACAGCATTAGGGAAGCAGAAAACCTaGCCTGACCAGGGTCAAAAGTCCCTTTCAGTTGGCACCAGCACC | + |
Preference number: 1 (lower is better) Translates to: SNHVGPETALGKQKT*PDQGQKSLSVGTST Trigger: GGTGCTGGTGCCAACTGAAAGGGACTTTTGACCCTGGTCAGGCCAGGTTTTCTGCTTCCCTAATGCTGTCTCAGGTCCCACGTGATTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | CGGCCTCCCAGAGCTCATGTCTCTAGCTGCATATGTATCAGAAGATaGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCATTGGTCTTGC | + |
Preference number: 1 (lower is better) Translates to: RPPRAHVSSCICIRR*PSQPSLEREAHWSC Trigger: GCAAGACCAATGGGCCTCTCTTTCCAGTGATGGCTGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACATGAGCTCTGGGAGGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | GGACCTAGCAAACACAGAAGTGGATGCTTACAGTCAGCTATTGTCTaGATCACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTCCCCAAG | + |
Preference number: 1 (lower is better) Translates to: GPSKHRSGCLQSAIV*ITGPPVEELEKVPK Trigger: CTTGGGGACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTGATCCAGACAATAGCTGACTGTAAGCATCCACTTCTGTGTTTGCTAGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 90 bp | CAAGAACCTAAAGGGGTCTGCAACCCTACAGGTGAAACAACAATATaGACTGACCAGTACCGGCCTCCCAGAGCTCATGTCTCTAGCTGC | + |
Preference number: 1 (lower is better) Translates to: QEPKGVCNPTGETTI*TDQYRPPRAHVSSC Trigger: GCAGCTAGAGACATGAGCTCTGGGAGGCCGGTACTGGTCAGTTCATATTGTTGTTTCACCTGTAGGGTTGCAGACCCCTTTAGGTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 90 bp | CTGCTAGCAGAAGAGTGGCACAGCTGCTTCTGTAGCTACCAGATTTaGGGGGCACCTGTTATCCCAAATGGAGTGCCCTCCAAAAGCATT | + |
Preference number: 1 (lower is better) Translates to: LLAEEWHSCFCSYQI*GAPVIPNGVPSKSI Trigger: AATGCTTTTGGAGGGCACTCCATTTGGGATAACAGGTGCCCCTCAAATCTGGTAGCTACAGAAGCAGCTGTGCCACTCTTCTGCTAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | ACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAGTaGAGGACTGTTCCTGTTTCTCCACATCCTCGCCAGCATCTGCTG | + |
Preference number: 1 (lower is better) Translates to: TDFQSGCTSLQSHQQ*RTVPVSPHPRQHLL Trigger: CAGCAGATGCTGGCGAGGATGTGGAGAAACAGGAACAGTCCTCCACTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | CAAGGTTGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTaGAAGCTTGTACAACCACTCTGGAAATCAGTCTGCCAACTCCTC | + |
Preference number: 1 (lower is better) Translates to: QGCGERGTLLHCWWD*KLVQPLWKSVCQLL Trigger: GAGGAGTTGGCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | GAATGTAGATATCTCTGCACCTTTGCTGCAAGAGGAGAGCTGGCCTaGAGAGAGTGTCTGACCACTGAAACACAGGAGAAATCTAGTCTC | + |
Preference number: 1 (lower is better) Translates to: ECRYLCTFAARGELA*RECLTTETQEKSSL Trigger: GAGACTAGATTTCTCCTGTGTTTCAGTGGTCAGACACTCTCTGCAGGCCAGCTCTCCTCTTGCAGCAAAGGTGCAGAGATATCTACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | AGATGCTGGCAAGGTTGTGGAGAAAGAGGAACACTCCTCCATTGTTaGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGC | + |
Preference number: 1 (lower is better) Translates to: RCWQGCGERGTLLHC*WDCKLVQPLWKSVC Trigger: GCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTGCCAGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | CCAGTCAGAATGGCTAAGATAAACAATTCTGGTGACAGCAGATGCTaGCAAGGTTGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGG | + |
Preference number: 1 (lower is better) Translates to: PVRMAKINNSGDSRC*QGCGERGTLLHCWW Trigger: CCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTGCCAGCATCTGCTGTCACCAGAATTGTTTATCTTAGCCATTCTGACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | TCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCTaGGTTTGGGAGCTGATTATGGGATGGATCCCTGGATATGGCAAT | + |
Preference number: 1 (lower is better) Translates to: SGSFQQNLASVCNGV*VWELIMGWIPGYGN Trigger: ATTGCCATATCCAGGGATCCATCCCATAATCAGCTCCCAAACGCAGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | AGATTTTTCACCAAAGACTATGAAAGCCAGAAGATCCTGGACAGATaGTATACAGACACAGAGAGAACCCAAATGCCAGCCCAGGCTACT | + |
Preference number: 1 (lower is better) Translates to: RFFTKDYESQKILDR*YTDTERTQMPAQAT Trigger: AGTAGCCTGGGCTGGCATTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAAAATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 90 bp | TTGGGCTTGGAATTCAGTACTGCCCCTGGTATTACACTATCTCTTTaGGTAAAAGTTAGGTCACTGCCCTTCACAGGAATCTACCATCAC | + |
Preference number: 1 (lower is better) Translates to: LGLEFSTAPGITLSL*VKVRSLPFTGIYHH Trigger: GTGATGGTAGATTCCTGTGAAGGGCAGTGACCTAACTTTTACTCAAAGAGATAGTGTAATACCAGGGGCAGTACTGAATTCCAAGCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | CGAATTGTAAATTACATTCAGATTCTACACAAAACCTCTCCTGTGTaGATCTGTCTGTTATTCATCCACGCTTTGCCCACCCGCATCGAG | + |
Preference number: 1 (lower is better) Translates to: RIVNYIQILHKTSPV*ICLLFIHALPTRIE Trigger: CTCGATGCGGGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAGAGGTTTTGTGTAGAATCTGAATGTAATTTACAATTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | AGAAGATCCTGGACAGATGCTATACAGACACAGAGAGAACCCAAATaGCAGCCCAGGCTACTATACCCAGCCAAACTTTCAATTACTATA | + |
Preference number: 1 (lower is better) Translates to: RRSWTDAIQTQREPK*QPRLLYPAKLSITI Trigger: TATAGTAATTGAAAGTTTGGCTGGGTATAGTAGCCTGGGCTGGCATTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | TGGAGCATGTGTCCTTCTTACCAGTTGGAAAATCTTCTGGATATATaGCCAGGAGAGGTATTGTTGGATCCTCGGGTAGTAATATGTCCA | + |
Preference number: 1 (lower is better) Translates to: WSMCPSYQLENLLDI*PGEVLLDPRVVICP Trigger: TGGACATATTACTACCCGAGGATCCAACAATACCTCTCCTGGGCATATATCCAGAAGATTTTCCAACTGGTAAGAAGGACACATGCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | ACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTaGAAATCAGTCTGCCAACTCCTCAGAAAATTGGACATTGTACTA | + |
Preference number: 1 (lower is better) Translates to: TLLHCWWDCKLVQPL*KSVCQLLRKLDIVL Trigger: TAGTACAATGTCCAATTTTCTGAGGAGTTGGCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | ATTACACCAGATTTTTCACCAAAGACTATGAAAGCCAGAAGATCCTaGACAGATGCTATACAGACACAGAGAGAACCCAAATGCCAGCCC | + |
Preference number: 1 (lower is better) Translates to: ITPDFSPKTMKARRS*TDAIQTQREPKCQP Trigger: GGGCTGGCATTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAAAATCTGGTGTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | GAAAATTGGACATTGTACTACCGGAGGATCCTGCAATACCTCTTCTaGGCATATATCCAGAAGATGTTCCAACCAGTAAGAAGGACACAT | + |
Preference number: 1 (lower is better) Translates to: ENWTLYYRRILQYLF*AYIQKMFQPVRRTH Trigger: ATGTGTCCTTCTTACTGGTTGGAACATCTTCTGGATATATGCCCAGAAGAGGTATTGCAGGATCCTCCGGTAGTACAATGTCCAATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | AATAGAGCAGCAATGGCTTGTGCTGTTAGATCCAGAATCGACAAATaGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAGAGACACC | + |
Preference number: 1 (lower is better) Translates to: NRAAMACAVRSRIDK*DLIKLQSFCKARDT Trigger: GGTGTCTCTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTGGATCTAACAGCACAAGCCATTGCTGCTCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 90 bp | AAGGCAAGCCTATCAGAATTACACCAGATTTTTCACCAAAGACTATaGAAGCCAGAAGATCCTGGACAGATGCTATACAGACACAGAGAG | + |
Preference number: 1 (lower is better) Translates to: KASLSELHQIFHQRL*KPEDPGQMLYRHRE Trigger: CTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAAAATCTGGTGTAATTCTGATAGGCTTGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 90 bp | AGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATACTGCCTaGTTCTTGGTACTTACTGTATTTAAGTTACAGCTTACACAGTGG | + |
Preference number: 1 (lower is better) Translates to: RKLACSLSTELENTA*FLVLTVFKLQLTQW Trigger: CCACTGTGTAAGCTGTAACTTAAATACAGTAAGTACCAAGAATCAGGCAGTATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | GAGCAACAGCAACAGAAAACAAGAGATAGAAGGGAGAATCTCAGGTaGAGAAGATTCCATAGGGAACATGGGCACAACAATCAAAGAAAA | + |
Preference number: 1 (lower is better) Translates to: EQQQQKTRDRRENLR*RRFHREHGHNNQRK Trigger: TTTTCTTTGATTGTTGTGCCCATGTTCCCTATGGAATCTTCTGCACCTGAGATTCTCCCTTCTATCTCTTGTTTTCTGTTGCTGTTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | GTAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATaGATACAGAAAATGTGGTATATTTACACAATGGAGTACTACTCA | + |
Preference number: 1 (lower is better) Translates to: VARSWKEPRCPSTEE*IQKMWYIYTMEYYS Trigger: TGAGTAGTACTCCATTGTGTAAATATACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | TATCCACTTATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTaGGTTACCTCACTCAGTATGATGCCCTCCATGTCCATCCATTTG | + |
Preference number: 1 (lower is better) Translates to: YPLISEYTSCEFFCD*VTSLSMMPSMSIHL Trigger: CAAATGGATGGACATGGAGGGCATCATACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGATAAGTGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | TATTATCACACTATGGAGAGCAGGTCTAAGATAAAAATAGAGGCTTaGCTAACCACAGGTAAACTCTATAACCTCAGACGAGATAAGCCA | + |
Preference number: 1 (lower is better) Translates to: YYHTMESRSKIKIEA*LTTGKLYNLRRDKP Trigger: TGGCTTATCTCGTCTGAGGTTATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTCCATAGTGTGATAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | CCAGCCCAGGCTACTATACCCAGCCAAACTTTCAATTACTATAGATaGAGAAAGCAAAGTATTCCACGACAAAACCAAATTCACACATTA | + |
Preference number: 1 (lower is better) Translates to: PAQATIPSQTFNYYR*RKQSIPRQNQIHTL Trigger: TAATGTGTGAATTTGGTTTTGTCGTGGAATACTTTGCTTTCTCCATCTATAGTAATTGAAAGTTTGGCTGGGTATAGTAGCCTGGGCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | GGTGTTTTGTTCCCATTTCTAGGAAGGGGCAAAGTGTCCACACTTTaGTCTTCATTCTTCTTGAGTTTCATGAGTTTAACAATTACTCTG | + |
Preference number: 1 (lower is better) Translates to: GVLFPFLGRGKVSTL*SSFFLSFMSLTITL Trigger: CAGAGTAATTGTTAAACTCATGAAACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCCTAGAAATGGGAACAAAACACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 90 bp | AGGATATACCTTCTTCTCAGCATCTCACAGAACCTTCTCCAAAATTaGCCACATAATTGGTCACAAAACAGGCCTCAACAGATACAAAAA | + |
Preference number: 1 (lower is better) Translates to: RIYLLLSISQNLLQN*PHNWSQNRPQQIQK Trigger: TTTTTGTATCTGTTGAGGCCTGTTTTGTGACCAATTATGTGGTCAATTTTGGAGAAGGTTCTGTGAGATGCTGAGAAGAAGGTATATCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 90 bp | TTTTTATCACAATTGCTCTGTAGTACAGCTTTAGGTCAGGCATGGTaGTTCCACCAGAGGTTCTTTAATCCTTCAGAAGAGTTTTTGCTA | + |
Preference number: 1 (lower is better) Translates to: FLSQLLCSTALGQAW*FHQRFFNPSEEFLL Trigger: TAGCAAAAACTCTTCTGAAGGATTAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTGTACTACAGAGCAATTGTGATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | CTTCCTCAGAGACTTTTTGTATGGACCAAAGCGACAAATATTTATTaGCATGTATGGCAGACTATGAGACATACAACAAAAGCACTTTGC | + |
Preference number: 1 (lower is better) Translates to: LPQRLFVWTKATNIY*HVWQTMRHTTKALC Trigger: GCAAAGTGCTTTTGTTGTATGTCTCATAGTCTGCCATACATGGCAATAAATATTTGTCGCTTTGGTCCATACAAAAAGTCTCTGAGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 90 bp | TTTTGGCAAGATAGCCAATTTTACTATATTGATCCTGCCAATCCATaGGCATGGGAGGTCTTTCCATCTTCTGAGATCTTCTTTAATTTC | + |
Preference number: 1 (lower is better) Translates to: FWQDSQFYYIDPANP*AWEVFPSSEIFFNF Trigger: GAAATTAAAGAAGATCTCAGAAGATGGAAAGACCTCCCATGCTCATGGATTGGCAGGATCAATATAGTAAAATTGGCTATCTTGCCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | TTCAAGGCTTTTTCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTaGTTTAAGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAGTA | + |
Preference number: 1 (lower is better) Translates to: FKAFSHFLLYKFQCL*FKWSSLIHLDLTLV Trigger: TACTAAGGTCAAATCTAAGTGGATTAAGGAACTCCACTTAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGAAAAAGCCTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 90 bp | CTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTTGATTCTTaGTCTTACAGCACAAGCCATTGGAGTTCTATTCAGGAATATTTC | + |
Preference number: 1 (lower is better) Translates to: LTEALQFYEVPFVDS*SYSTSHWSSIQEYF Trigger: GAAATATTCCTGAATAGAACTCCAATGGCTTGTGCTGTAAGATCAAGAATCAACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 90 bp | CTGACTTTGTCTCAATTATTTTATTGCCTAGTTCCTTCCGATCTTTaGATTTTCATTCCTCTGTTCTCTGTAAGAATCATTAAGCATCCG | + |
Preference number: 1 (lower is better) Translates to: LTLSQLFYCLVPSDL*IFIPLFSVRIIKHP Trigger: CGGATGCTTAATGATTCTTACAGAGAACAGAGGAATGAAAATGCAAAGATCGGAAGGAACTAGGCAATAAAATAATTGAGACAAAGTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | CTGATCTTCAATAACAACATAAATAATGGAAAGCCAACATTCACGTaGAAACTGAACAACAGTCTTCTCAATGATACCTTGGTCAAGGAA | + |
Preference number: 1 (lower is better) Translates to: LIFNNNINNGKPTFT*KLNNSLLNDTLVKE Trigger: TTCCTTGACCAAGGTATCATTGAGAAGACTGTTGTTCAGTTTCCACGTGAATGTTGGCTTTCCATTATTTATGTTGTTATTGAAGATCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 90 bp | TCCTTTAGACAATATCTGTTTTATCTTCCTCAGAGACTTTTTGTATaGACCAAAGCGACAAATATTTATTGCCATGTATGGCAGACTATG | + |
Preference number: 1 (lower is better) Translates to: SFRQYLFYLPQRLFV*TKATNIYCHVWQTM Trigger: CATAGTCTGCCATACATGGCAATAAATATTTGTCGCTTTGGTCCATACAAAAAGTCTCTGAGGAAGATAAAACAGATATTGTCTAAAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | CCAGGGCCACAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTaGGGCACAGAGTCAGCAGACTCCTCCAAGGTCCCTAGAGGACTA | + |
Preference number: 2 (lower is better) Translates to: PGPQIPSSLQQHWVT*GTESADSSKVPRGL Trigger: TAGTCCTCTAGGGACCTTGGAGGAGTCTGCTGACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGCCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | CACAAAACCTCTCCTGTGTGCATCTGTCTGTTATTCATCCACGCTTaGCCCACCCGCATCGAGAGACCCCATTCCACGCAGACACAGGGA | + |
Preference number: 2 (lower is better) Translates to: HKTSPVCICLLFIHA*PTRIERPHSTQTQG Trigger: TCCCTGTGTCTGCGTGGAATGGGGTCTCTCGATGCGGGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAGAGGTTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | CTAGGACTCCATAGAATGACCAGCAGTCTCAGCAAACCTGGACCCTaGAGCTCTCTCACACACTGTGCCACCACCTGGGCACATACACCA | + |
Preference number: 2 (lower is better) Translates to: LGLHRMTSSLSKPGP*SSLTHCATTWAHTP Trigger: TGGTGTATGTGCCCAGGTGGTGGCACAGTGTGTGAGAGAGCTCAAGGGTCCAGGTTTGCTGAGACTGCTGGTCATTCTATGGAGTCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | TTAAATGAAATGTTACAGTCTCCACTCTGGCAACCTGTGCCCCTCTaGCCTCCCTCCCTGCATGTTGGGGGACAAGGGCCCTCTGTACAT | + |
Preference number: 2 (lower is better) Translates to: LNEMLQSPLWQPVPL*PPSLHVGGQGPSVH Trigger: ATGTACAGAGGGCCCTTGTCCCCCAACATGCAGGGAGGGAGGCAAGAGGGGCACAGGTTGCCAGAGTGGAGACTGTAACATTTCATTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | ACAGCTTCTGGGACAGGCCTTGTTTCGGGCCTGCATCTTCTGCCAGGAGGCAGGTACAGGGATTTACTATaGTTTAGGAAGCAGATCGGC | + |
Preference number: 2 (lower is better) Translates to: TASGTGLVSGLHLLPGGRYRDLL*FRKQIG Trigger: GCCGATCTGCTTCCTAAACCATAGTAAATCCCTGTA...CCTGCCTCCTGGCAGAAGATGCAGGCCCGAAACAAGGCCTGTCCCAGAAGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | GCCACAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTTGGGCACAGAGTCAACTCCTCAGAAAATTaGACATTGTACTACCGGAGG | + |
Preference number: 2 (lower is better) Translates to: ATNPFQSAAALGHLGHRVNSSEN*TLYYRR Trigger: CCTCCGGTAGTACAATGTCCAATTTTCTGAGGAGTT...GACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | ACAGCTTCTGGGACAGGCCTTGTTTCGGGCCTGCATCTTCTGCCAGGAGGCAGGAATTCTGAATATCTATaGTCCAAATTCAAGGACAGC | + |
Preference number: 2 (lower is better) Translates to: TASGTGLVSGLHLLPGGRNSEYL*SKFKDS Trigger: GCTGTCCTTGAATTTGGAGCATAGATATTCAGAATT...CCTGCCTCCTGGCAGAAGATGCAGGCCCGAAACAAGGCCTGTCCCAGAAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | ACAGCTTCTGGGACAGGCCTTGTTTCGGGCCTGCATCTTCTGCCAGGAGGCAGGAGAAATGACTTAAAGTaGGAATACAGAGAGGAGAAA | + |
Preference number: 2 (lower is better) Translates to: TASGTGLVSGLHLLPGGRRNDLK*EYREEK Trigger: TTTCTCCTCTCTGTATTCCCACTTTAAGTCATTTCT...CCTGCCTCCTGGCAGAAGATGCAGGCCCGAAACAAGGCCTGTCCCAGAAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | CACCTGGGCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTGCTGCAATACCTCTTCTaGGCATATATCCAGAAGATG | + |
Preference number: 2 (lower is better) Translates to: HLGMESADTCNVPREQLLLQYLF*AYIQKM Trigger: CATCTTCTGGATATATGCCCAGAAGAGGTATTGCAG...CAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | CACCTGGGCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTGAAACACAGAAGTGGATaGTTACAGTCAGCTATTGTC | + |
Preference number: 2 (lower is better) Translates to: HLGMESADTCNVPREQLLKHRSG*LQSAIV Trigger: GACAATAGCTGACTGTAAGCATCCACTTCTGTGTTT...CAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATCGGGCCTGCATCTTCTaGCAGGAGGCAGGTCCGAAT | + |
Preference number: 2 (lower is better) Translates to: FTFSFRKLACSLSTELENRACIF*QEAGPN Trigger: ATTCGGACCTGCCTCCTGGCAGAAGATGCAGGCCCG...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | CTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACCAGGGCCAAGAAGTaGGAGTGGGTGGGTAGGGGT | + |
Preference number: 2 (lower is better) Translates to: LRIGNKTPMEGVTETKFGTRAKK*EWVGRG Trigger: ACCCCTACCCACCCACTCCCACTTCTTGGCCCTGGT...TCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | GCCACAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTTGGGCACAGAGTCAAGGTCAAATCTAAGTaGATTAAGGAACTCCACATA | + |
Preference number: 2 (lower is better) Translates to: ATNPFQSAAALGHLGHRVKVKSK*IKELHI Trigger: TATGTGGAGTTCCTTAATCCACTTAGATTTGACCTT...GACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | GAGACAAGTCTTTGCAGGTTAGAGTGTGAACTACAGAAGCTAACAGCTTCTGGGGCAAGACCTTGGGCTTaGAATTCAGTACTGCCCCTG | + |
Preference number: 2 (lower is better) Translates to: ETSLCRLECELQKLTASGARPWA*NSVLPL Trigger: CAGGGGCAGTACTGAATTCCAAGCCCAAGGTCTTGC...CCCAGAAGCTGTTAGCTTCTGTAGTTCACACTCTAACCTGCAAAGACTTGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAAGGTCACCTGGTCACCTaGTCACCTGGGCATGGAGTC | + |
Preference number: 2 (lower is better) Translates to: SIGLLVCRYTSSMQFLSQGHLVT*SPGHGV Trigger: GACTCCATGCCCAGGTGACCAGGTGACCAGGTGACC...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATGTTGGCACCAGCACCTaGTCACCTGGTCACCTGGTC | + |
Preference number: 2 (lower is better) Translates to: FTFSFRKLACSLSTELENVGTST*SPGHLV Trigger: GACCAGGTGACCAGGTGACCAGGTGCTGGTGCCAAC...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCTCTGGCAAGGTGGAGTaGGGATGGCCTCTTGGAGAC | + |
Preference number: 2 (lower is better) Translates to: RGKVSTLWSSFFLSFMYFSGKVE*GWPLGD Trigger: GTCTCCAAGAGGCCATCCCCACTCCACCTTGCCAGA...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTATCCCTCCCTGCATGTTaGGGGACAAGGGCCCTCTGT | + |
Preference number: 2 (lower is better) Translates to: SVSTHHVSSFVIGLPHSVSLPAC*GTRALC Trigger: ACAGAGGGCCCTTGTCCCCCAACATGCAGGGAGGGA...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAATCCAGGCACCTTCCCTaGAAGAGGAGAGGTGTCTGC | + |
Preference number: 2 (lower is better) Translates to: SIGLLVCRYTSSMQFLSQSRHLP*KRRGVC Trigger: GCAGACACCTCTCCTCTTGCAGGGAAGGTGCCTGGA...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATCCTGGGCATGGAGTCTaGAGACACCTGCAATGTCCC | + |
Preference number: 2 (lower is better) Translates to: ESRSKIKIEACLTTGKLYPGHGV*RHLQCP Trigger: GGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGG...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAAAACCTGTGCCCCTCTTaGCTCCCTCCCTGCATGTTG | + |
Preference number: 2 (lower is better) Translates to: SIGLLVCRYTSSMQFLSQNLCPS*LPPCML Trigger: CAACATGCAGGGAGGGAGGCAAGAGGGGCACAGGTT...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | CACCTGGGCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTGCCAGAGATTACCAAATaGCAAAAGGCAAACTTAAGA | + |
Preference number: 2 (lower is better) Translates to: HLGMESADTCNVPREQLLPEITK*QKANLR Trigger: TCTTAAGTTTGCCTTTTGCCATTTGGTAATCTCTGG...CAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTGGTCACCTGGTCACCTaGGCATGGAGTCTGCAGACA | + |
Preference number: 2 (lower is better) Translates to: ISEYTSCEFFCDWVTSLSGHLVT*AWSLQT Trigger: TGTCTGCAGACTCCATGCCCAGGTGACCAGGTGACC...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATAGTCTGCAGCAGCACTaGGTCACCTTGGGCACAGAG | + |
Preference number: 2 (lower is better) Translates to: FTFSFRKLACSLSTELENSLQQH*VTLGTE Trigger: CTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACT...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTATCCCACTCCCACTTTTaGCCCTGGCGTTCCCCTGTA | + |
Preference number: 2 (lower is better) Translates to: SVSTHHVSSFVIGLPHSVSHSHF*PWRSPV Trigger: TACAGGGGAACGCCAGGGCCAAAAGTGGGAGTGGGA...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | CGTCTCAAGGATAAAAGAGCCTCTGGTGGAATCACCATGTCTGACCTAAAGCTGAAATTCCTAGGCAAATaGATGGACCTGGAAGGCATC | + |
Preference number: 2 (lower is better) Translates to: RLKDKRASGGITMSDLKLKFLGK*MDLEGI Trigger: GATGCCTTCCAGGTCCATCCATTTGCCTAGGAATTT...CAGCTTTAGGTCAGACATGGTGATTCCACCAGAGGCTCTTTTATCCTTGAGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | GAGACAAGTCTTTGCAGGTTAGAGTGTGAACTACAGAAGCTAACAGCTTCTGGGATGCTGGCAAGGTTGTaGAGAAAGAGGAACACTCCT | + |
Preference number: 2 (lower is better) Translates to: ETSLCRLECELQKLTASGMLARL*RKRNTP Trigger: AGGAGTGTTCCTCTTTCTCCACAACCTTGCCAGCAT...CCCAGAAGCTGTTAGCTTCTGTAGTTCACACTCTAACCTGCAAAGACTTGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR TCA 90 bp | AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCAACAACAATATGAACTaGCCAGTACCGGCCTCCCAG | + |
Preference number: 2 (lower is better) Translates to: RGKVSTLWSSFFLSFMYFNNNMN*PVPASQ Trigger: CTGGGAGGCCGGTACTGGTCAGTTCATATTGTTGTT...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR TCA 90 bp | TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAGTTCCCGGATCCCTCTaGGACAAGTCTTTGCAGGTT | + |
Preference number: 2 (lower is better) Translates to: SVSTHHVSSFVIGLPHSVVPGSL*DKSLQV Trigger: AACCTGCAAAGACTTGTCTCAGAGGGATCCGGGAAC...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCGGGTGTGAAAGCCCTTaGCCTAGGAGTGAAAAGTTC | + |
Preference number: 2 (lower is better) Translates to: RGKVSTLWSSFFLSFMYFGCESP*PRSEKF Trigger: GAACTTTTCACTCCTAGGGCAAGGGCTTTCACACCC...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAAAGGAAGCTCTCCTCCTaGAGTCTAGCATTCCCTACC | + |
Preference number: 2 (lower is better) Translates to: SIGLLVCRYTSSMQFLSQRKLSS*SLAFPT Trigger: GGTAGGGAATGCTAGACTCCAGGAGGAGAGCTTCCT...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATGGGAAGCAGAAAACCTaGCCTGACCAGGGTCAAAAG | + |
Preference number: 2 (lower is better) Translates to: FTFSFRKLACSLSTELENGKQKT*PDQGQK Trigger: CTTTTGACCCTGGTCAGGCCAGGTTTTCTGCTTCCC...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATCAGTCTCAGCAAACCTaGACCCTTGAGCTCTCTCAC | + |
Preference number: 2 (lower is better) Translates to: ESRSKIKIEACLTTGKLYQSQQT*TLELSH Trigger: GTGAGAGAGCTCAAGGGTCCAGGTTTGCTGAGACTG...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | CTTCCCAACTCATCTCACACACAACCCCATCTACTAATCCTTTCTTaGTCCTCAGAAAAGAGGAGGCCTCCTAAGTATATCAACCAGCTT | + |
Preference number: 2 (lower is better) Translates to: LPNSSHTQPHLLILS*SSEKRRPPKYINQL Trigger: AAGCTGGTTGATATACTTAGGAGGCCTCCTCTTTTCTGAGGACAAAGAAAGGATTAGTAGATGGGGTTGTGTGTGAGATGAGTTGGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | GGACCACCGGTGAGTGTAACACAACTTCTGTTTCTTTCTAATCACTaGGGACCTGAGATAGCATTGAGTGGAACACAACTTCTGTTCCAT | + |
Preference number: 2 (lower is better) Translates to: GPPVSVTQLLFLSNH*GPEIALSGTQLLFH Trigger: ATGGAACAGAAGTTGTGTTCCACTCAATGCTATCTCAGGTCCCAAGTGATTAGAAAGAAACAGAAGTTGTGTTACACTCACCGGTGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | GTCACAGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTaGTTCCCATTTCTAGGAAGGGGCAAAGTGTCCACACTTTGGTCT | + |
Preference number: 2 (lower is better) Translates to: VTAPNFVSVTPSMGV*FPFLGRGKVSTLWS Trigger: AGACCAAAGTGTGGACACTTTGCCCCTTCCTAGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCTGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR TCA 90 bp | AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTCAATCGCACTGGACCTaGGACAGCATTAGGGAAGCA | + |
Preference number: 2 (lower is better) Translates to: SSKFCLCNSFNGCFVPISQSHWT*DSIREA Trigger: TGCTTCCCTAATGCTGTCTCAGGTCCAGTGCGATTG...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR TCA 90 bp | AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTGGAGGAGAAATGGGATaGGGAACTATCAGAGGGCAG | + |
Preference number: 2 (lower is better) Translates to: SSKFCLCNSFNGCFVPISGGEMG*GTIRGQ Trigger: CTGCCCTCTGATAGTTCCTCATCCCATTTCTCCTCC...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTATCTGGTGACAGCAGATaGTGGCAAGGTTGTGGAGAA | + |
Preference number: 2 (lower is better) Translates to: SVSTHHVSSFVIGLPHSVSGDSR*WQGCGE Trigger: TTCTCCACAACCTTGCCAGCATCTGCTGTCACCAGA...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTCAGAGAGAACCCAAATaGCAGCCCAGGCTACTATAC | + |
Preference number: 2 (lower is better) Translates to: ISEYTSCEFFCDWVTSLSQREPK*QPRLLY Trigger: GTATAGTAGCCTGGGCTGGCATTTGGGTTCTCTCTG...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | GAGACAAGTCTTTGCAGGTTAGAGTGTGAACTACAGAAGCTAACAGCTTCTGGGGAATGTAGATATCTCTaGACCTTTGCTGCAAGAGGA | + |
Preference number: 2 (lower is better) Translates to: ETSLCRLECELQKLTASGECRYL*TFAARG Trigger: TCCTCTTGCAGCAAAGGTGCAGAGATATCTACATTC...CCCAGAAGCTGTTAGCTTCTGTAGTTCACACTCTAACCTGCAAAGACTTGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | CGTCTCAAGGATAAAAGAGCCTCTGGTGGAATCACCATGTCTGACCTAAAGCTGCCCTCAACAGAGGAATaGATACAGAAAATGTGGTAT | + |
Preference number: 2 (lower is better) Translates to: RLKDKRASGGITMSDLKLPSTEE*IQKMWY Trigger: ATACCACATTTTCTGTATCCATTCCTCTGTTGAGGG...CAGCTTTAGGTCAGACATGGTGATTCCACCAGAGGCTCTTTTATCCTTGAGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCGTGACCATAGGTGTGTaGGTTCATTTCTGGGTCTAC | + |
Preference number: 2 (lower is better) Translates to: RGKVSTLWSSFFLSFMYFVTIGV*VHFWVY Trigger: GTAGACCCAGAAATGAACCCACACACCTATGGTCAC...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | AGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATaGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTG | + |
Preference number: 2 (lower is better) Translates to: RRTKTKVWTLCPFLE*GTKHPWKELQRQSL Trigger: CAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | ACACAACTTCTGTTTCTTTCTAATCACTTGGGACCTGAGATAGCATaGAGTGGAACACAACTTCTGTTCCATTCCAATCGCACTGGACCT | + |
Preference number: 2 (lower is better) Translates to: TQLLFLSNHLGPEIA*SGTQLLFHSNRTGP Trigger: AGGTCCAGTGCGATTGGAATGGAACAGAAGTTGTGTTCCACTCAATGCTATCTCAGGTCCCAAGTGATTAGAAAGAAACAGAAGTTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | AGTAGTACTCCATCGTGTACCACATTTTCTGTATCCATACCTCTGTaGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTACAAATA | + |
Preference number: 2 (lower is better) Translates to: SSTPSCTTFSVSIPL*RGIWVLSSFWLLQI Trigger: TATTTGTAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGTATGGATACAGAAAATGTGGTACACGATGGAGTACTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR TCA 90 bp | ATAGTAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATAAGAGAAAAGTCATCCTaGTCACAGATTTCCATCCTT | + |
Preference number: 2 (lower is better) Translates to: IVARSWKEPRCPSTEEWIREKSS*SQISIL Trigger: AAGGATGGAAATCTGTGATCAGGATGACTTTTCTCT...TATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR TCA 90 bp | TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAGGTGAAACAACAATATaGACTGACCAGTACCGGCCT | + |
Preference number: 2 (lower is better) Translates to: SVSTHHVSSFVIGLPHSVGETTI*TDQYRP Trigger: AGGCCGGTACTGGTCAGTTCATATTGTTGTTTCACC...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR TCA 90 bp | TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAAAAGGATGGGCCATCTaGAGACTGCCTTATGAATCC | + |
Preference number: 2 (lower is better) Translates to: SVSTHHVSSFVIGLPHSVKGWAI*RLPYES Trigger: GGATTCATAAGGCAGTCTTCAGATGGCCCATCCTTT...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CCA 90 bp | TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAATAGTAGCCAGAAGCTaGAAAGAACCCAGATGTCCC | + |
Preference number: 2 (lower is better) Translates to: SVSTHHVSSFVIGLPHSVIVARS*KEPRCP Trigger: GGGACATCTGGGTTCTTTCCAGCTTCTGGCTACTAT...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR TCA 90 bp | ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTCAGGGGAAAAATTCCTaGATAGAGCAGCAATGGCTT | + |
Preference number: 2 (lower is better) Translates to: ISEYTSCEFFCDWVTSLSQGKNS*IEQQWL Trigger: AAGCCATTGCTGCTCTATTCAGGAATTTTTCCCCTG...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR TCA 90 bp | TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATTGGAATCACCATGTCTaGCCTAAAGCTGTACTACAG | + |
Preference number: 2 (lower is better) Translates to: FTFSFRKLACSLSTELENWNHHV*PKAVLQ Trigger: CTGTAGTACAGCTTTAGGTCAGACATGGTGATTCCA...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CCA 90 bp | ATGGCTGACTTTGTCTCAATTATTTTATTGCCTAGTTCCTTCCGATCTTTGCATCTAGTCAGCCATCACTaGAAAGAGAGGCCCATTGGT | + |
Preference number: 2 (lower is better) Translates to: MADFVSIILLPSSFRSLHLVSHH*KERPIG Trigger: ACCAATGGGCCTCTCTTTCCAGTGATGGCTGACTAG...ATGCAAAGATCGGAAGGAACTAGGCAATAAAATAATTGAGACAAAGTCAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 90 bp | GTGTGGGTTCATTTCTGGGTCTACAATTCTATTCCATTGGTCTACTaGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAATTGC | + |
Preference number: 2 (lower is better) Translates to: VWVHFWVYNSIPLVY*SVAIPVPCSFYHNC Trigger: GCAATTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGAATAGAATTGTAGACCCAGAAATGAACCCACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | ACCATAGGTGTGTGGGTTCATTTCTGGGTCTACAATTCTATTCCATaGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTAT | + |
Preference number: 2 (lower is better) Translates to: TIGVWVHFWVYNSIP*VYLSVAIPVPCSFY Trigger: ATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGAATAGAATTGTAGACCCAGAAATGAACCCACACACCTATGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR TCA 90 bp | CTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGAAAGAGGCCAGAAATaGCTTAAAGTGGGAATACAG | + |
Preference number: 2 (lower is better) Translates to: LRIGNKTPMEGVTETKFGERGQK*LKVGIQ Trigger: CTGTATTCCCACTTTAAGTCATTTCTGGCCTCTTTC...TCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR TCA 90 bp | TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATATTCAACATTGTACTTaGAGTCCTAGCCCGAGCAAT | + |
Preference number: 2 (lower is better) Translates to: FTFSFRKLACSLSTELENIQHCT*SPSPSN Trigger: ATTGCTCGGGCTAGGACTTCAAGTACAATGTTGAAT...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR TCA 90 bp | TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTACATTCACGTGGAAACTaGACAACAGTCTTCTCAATG | + |
Preference number: 2 (lower is better) Translates to: SVSTHHVSSFVIGLPHSVHSRGN*TTVFSM Trigger: CATTGAGAAGACTGTTGTTCAGTTTCCACGTGAATG...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR TCA 90 bp | GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATTTTCACCAAAGACTATaGAAGCCAGAAGATCCTGGA | + |
Preference number: 2 (lower is better) Translates to: ESRSKIKIEACLTTGKLYFHQRL*KPEDPG Trigger: TCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAA...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR GCA 90 bp | AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTGAGAAAGTGGAGAAATaGCTCAGAGATATGGGCACA | + |
Preference number: 2 (lower is better) Translates to: SSKFCLCNSFNGCFVPISEKVEK*LRDMGT Trigger: TGTGCCCATATCTCTGAGGCATTTCTCCACTTTCTC...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR GCA 90 bp | GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATTTATCCCAAATGGAGTaGCCTCCAAAAGCATTGTCA | + |
Preference number: 2 (lower is better) Translates to: ESRSKIKIEACLTTGKLYLSQME*PPKALS Trigger: TGACAATGCTTTTGGAGGGCACTCCATTTGGGATAA...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTACGTTTACATTTCCAATaGTATCCCAAAAGTCCCCCA | + |
Preference number: 2 (lower is better) Translates to: SVSTHHVSSFVIGLPHSVRLHFQ*YPKSPP Trigger: TGGGGGACTTTTGGGATAGCATTGGAAATGTAAACG...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CCA 90 bp | TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATTTGAACAAATGGTGCTaGCACAACTGGTGGTTATCA | + |
Preference number: 2 (lower is better) Translates to: FTFSFRKLACSLSTELENLNKWC*HNWWLS Trigger: TGATAACCACCAGTTGTGCCAGCACCATTTGTTCAA...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTACCTGTTATCCCAAATaGAGTGCCCTCCAAAAGCAT | + |
Preference number: 2 (lower is better) Translates to: SSKFCLCNSFNGCFVPISTCYPK*SALQKH Trigger: ATGCTTTTGGAGGGCACTCCATTTGGGATAACAGGT...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CCA 90 bp | ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTTTACAGCTTACACAGTaGCAGTTTGGACCACTTACT | + |
Preference number: 2 (lower is better) Translates to: ISEYTSCEFFCDWVTSLSLQLTQ*QFGPLT Trigger: AGTAAGTGGTCCAAACTGCCACTGTGTAAGCTGTAA...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | GGGTGTTTTGTTCCCATTTCTAGGAAGGGGCAAAGTGTCCACACTTaGGTCTTCATTCTTCTTGAGTTTCATGAGTTTAACAATTACTCT | + |
Preference number: 2 (lower is better) Translates to: GCFVPISRKGQSVHT*VFILLEFHEFNNYS Trigger: AGAGTAATTGTTAAACTCATGAAACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCCTAGAAATGGGAACAAAACACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR TCA 90 bp | GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATCTTAAAAGTCACTCATaGGGCAAAAGAGTTTCAAGG | + |
Preference number: 2 (lower is better) Translates to: ESRSKIKIEACLTTGKLYLKSHS*GKRVSR Trigger: CCTTGAAACTCTTTTGCCTCATGAGTGACTTTTAAG...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR TCA 90 bp | TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAAATGTATGGCAGACTATaGGACATACAACAAAAGCAC | + |
Preference number: 2 (lower is better) Translates to: SIGLLVCRYTSSMQFLSQMYGRL*DIQQKH Trigger: GTGCTTTTGTTGTATGTCTCATAGTCTGCCATACAT...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR TCA 90 bp | TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAATCCAGGTACTTCACTaGAGCTGTTTATCAGGTTTA | + |
Preference number: 2 (lower is better) Translates to: SVSTHHVSSFVIGLPHSVIQVLH*SCLSGL Trigger: TAAACCTGATAAACAGCTTCAGTGAAGTACCTGGAT...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR TCA 90 bp | TCCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATGCAGTTTTTATCACAACCAATTTTACTATATTaGTCCTGCCAATCCATGAGC | + |
Preference number: 2 (lower is better) Translates to: SIGLLVCRYTSSMQFLSQPILLY*SCQSMS Trigger: GCTCATGGATTGGCAGGATCAATATAGTAAAATTGG...TTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTTACAGAGACAAAGTTTaGAGCCAAGATGAAAGGATG | + |
Preference number: 2 (lower is better) Translates to: ISEYTSCEFFCDWVTSLSYRDKV*SQDERM Trigger: CATCCTTTCATCTTGGCTCCAAACTTTGTCTCTGTA...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAGACACAGCTATATCTaGGTCCTTTCAGCAAAATCT | + |
Preference number: 2 (lower is better) Translates to: ISEYTSCEFFCDWVTSLSRHSYI*VLSAKS Trigger: AGATTTTGCTGAAAGGACCCAGATATAGCTGTGTCT...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCACAATTCTATTCCATTaGTCTACTTGTCTGTCGCTA | + |
Preference number: 2 (lower is better) Translates to: RGKVSTLWSSFFLSFMYFTILFH*STCLSL Trigger: TAGCGACAGACAAGTAGACCAATGGAATAGAATTGT...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCAAGTTTCAGTGTCTCTaGTTTAAGTGGAGTTCCTTA | + |
Preference number: 2 (lower is better) Translates to: RGKVSTLWSSFFLSFMYFKFQCL*FKWSSL Trigger: TAAGGAACTCCACTTAAACCAGAGACACTGAAACTT...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | TCTTTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTaGATTCTTGATCTTACAGCACAAGCCATTGGAGTTCTATTCAGG | + |
Preference number: 2 (lower is better) Translates to: SFALQKLCNFMRSHL*ILDLTAQAIGVLFR Trigger: CCTGAATAGAACTCCAATGGCTTGTGCTGTAAGATCAAGAATCAACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | CTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACACTAGCAAGGTTTTaGTTAAAGGACCCAGATATA | + |
Preference number: 2 (lower is better) Translates to: LRIGNKTPMEGVTETKFGTLARF*LKDPDI Trigger: TATATCTGGGTCCTTTAAGCAAAACCTTGCTAGTGT...TCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTACTTCATTTGTACCTTaGAAGTATGTCACCCAACTT | + |
Preference number: 2 (lower is better) Translates to: ISEYTSCEFFCDWVTSLSTSFVP*KYVTQL Trigger: AAGTTGGGTGACATACTTGCAAGGTACAAATGAAGT...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR GCA 90 bp | GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATGTGTATGGATCCATGTaGTCTCTTTCAATATTTTCC | + |
Preference number: 2 (lower is better) Translates to: ESRSKIKIEACLTTGKLYVYGSM*SLSIFS Trigger: GGAAAATATTGAAAGAGAGCACATGGATCCATACAC...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | ATGGCTGACTTTGTCTCAATTATTTTATTGCCTAGTTCCTTCCGATCTTTGCATTGGTGCTGGCACAACTaGTGGTTATCATGTAGAAAA | + |
Preference number: 2 (lower is better) Translates to: MADFVSIILLPSSFRSLHWCWHN*WLSCRK Trigger: TTTTCTACATGATAACCACCAGTTGTGCCAGCACCA...ATGCAAAGATCGGAAGGAACTAGGCAATAAAATAATTGAGACAAAGTCAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTTCAATGGACAAATCGTaGAAACAGAAACCAAACAGG | + |
Preference number: 2 (lower is better) Translates to: SSKFCLCNSFNGCFVPISSMDKS*KQKPNR Trigger: CCTGTTTGGTTTCTGTTTCCACGATTTGTCCATTGA...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | AATGGTGCTGGCACAACTGGTGGTTATCATGTAGAAAAATGCAAATaGATTTATTCCTATCTCCCTGTACTAAGGTCAAATCTAAGTGGA | + |
Preference number: 2 (lower is better) Translates to: NGAGTTGGYHVEKCK*IYSYLPVLRSNLSG Trigger: TCCACTTAGATTTGACCTTAGTACAGGGAGATAGGAATAAATCAATTTGCATTTTTCTACATGATAACCACCAGTTGTGCCAGCACCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 90 bp | ATGTCTTTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTaGTTGATTCTTGATCTTACAGCACAAGCCATTGGAGTTCTATTC | + |
Preference number: 2 (lower is better) Translates to: MSFALQKLCNFMRSH*LILDLTAQAIGVLF Trigger: GAATAGAACTCCAATGGCTTGTGCTGTAAGATCAAGAATCAACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CCA 90 bp | AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTCTCAGAATGAAAGGCTaGAAAACAATTTTCCAAGCA | + |
Preference number: 2 (lower is better) Translates to: SSKFCLCNSFNGCFVPISLRMKG*KTIFQA Trigger: TGCTTGGAAAATTGTTTTCCAGCCTTTCATTCTGAG...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 72 bp | ACTCGGCCTGACCAGGGCCACAAATCCCTTCCAGTCTaGGCCAGCACTGGGTCACGTTGGGCGCAGAGTCTG | + |
Preference number: 3 (lower is better) Translates to: TRPDQGHKSLPV*ASTGSRWAQSL Trigger: CAGACTCTGCGCCCAACGTGACCCAGTGCTGGCGCAGACTGGAAGGGATTTGTGGCCCTGGTCAGGCCGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 72 bp | CCAGGGCCACAAATCCCTTCCAGTCTGCGCCAGCACTaGGTCACGTTGGGCGCAGAGTCTGCAGACAGCTCC | + |
Preference number: 3 (lower is better) Translates to: PGPQIPSSLRQH*VTLGAESADSS Trigger: GGAGCTGTCTGCAGACTCTGCGCCCAACGTGACCCAGTGCTGGCGCAGACTGGAAGGGATTTGTGGCCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 72 bp | ACTCGGCCTGGCCAGGGCCACAAATCCCTTCCAGTCTaGAGCAGCACTGGGTCACCTTGGGCACAGAGTCAG | + |
Preference number: 3 (lower is better) Translates to: TRPGQGHKSLPV*SSTGSPWAQSQ Trigger: CTGACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGCCCTGGCCAGGCCGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 72 bp | GGTCAGCGCCAGCACCAGGTCACCTGGGCACAAAGTTaGCAGACACCCCCAAGGTCCCTAGAGGACTCTCCA | + |
Preference number: 3 (lower is better) Translates to: GQRQHQVTWAQS*QTPPRSLEDSP Trigger: TGGAGAGTCCTCTAGGGACCTTGGGGGTGTCTGCCAACTTTGTGCCCAGGTGACCTGGTGCTGGCGCTGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 72 bp | TGTTACAGTCTCCACTCTGGCAACCTGTGCCCCTCTTaGCTCCCTCCCTGCATGTTGGGGGACAAGGGCCCT | + |
Preference number: 3 (lower is better) Translates to: CYSLHSGNLCPS*LPPCMLGDKGP Trigger: AGGGCCCTTGTCCCCCAACATGCAGGGAGGGAGGCAAGAGGGGCACAGGTTGCCAGAGTGGAGACTGTAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 72 bp | AGGCCCCATGGAATAGGGAGGTCTGGCAAGGTGGAGTaGGGATGGCCTCTTGGAGACAGGGGAGGAGAAATG | + |
Preference number: 3 (lower is better) Translates to: RPHGIGRSGKVE*GWPLGDRGGEM Trigger: CATTTCTCCTCCCCTGTCTCCAAGAGGCCATCCCCACTCCACCTTGCCAGACCTCCCTATTCCATGGGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 72 bp | CTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTaGGGCAGACCCCATTTCGGGCTCCAGACATCCAGG | + |
Preference number: 3 (lower is better) Translates to: LQTPAMSLENSF*GRPHFGLQTSR Trigger: CCTGGATGTCTGGAGCCCGAAATGGGGTCTGCCTCAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 72 bp | TCACCTGGTCACCTGGGCATGGAGTCTGCAGACACCTaGAATGTCCCTAGAGAACAGCTTCTGAGGCAGACC | + |
Preference number: 3 (lower is better) Translates to: SPGHLGMESADT*NVPREQLLRQT Trigger: GGTCTGCCTCAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTGACCAGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 72 bp | AAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTTaGGCACAGAGTCAGCAGACTCCTCCAAGGTCCCTA | + |
Preference number: 3 (lower is better) Translates to: KSLPVCSSTGSP*AQSQQTPPRSL Trigger: TAGGGACCTTGGAGGAGTCTGCTGACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 72 bp | CTCCTGTGTGCATCTGTCTGTTATTCATCCACGCTTTaGCCACCCGCATCGAGAGACCCCATTCCACGCAGA | + |
Preference number: 3 (lower is better) Translates to: LLCASVCYSSTL*PPASRDPIPRR Trigger: TCTGCGTGGAATGGGGTCTCTCGATGCGGGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 72 bp | CTTCTGCCAGGAGGCAGGTCCGAATGTAGATATCTCTaGACCTTTGCTGCAAGAGGAGAGCTGGCCTGCAGA | + |
Preference number: 3 (lower is better) Translates to: LLPGGRSECRYL*TFAARGELACR Trigger: TCTGCAGGCCAGCTCTCCTCTTGCAGCAAAGGTGCAGAGATATCTACATTCGGACCTGCCTCCTGGCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 72 bp | AGGAGGGATTTGCCTGAGCAACTAGGGGAGCCATCTTaGTTCCCGGATCCCTCTGAGACAAGTCTTTGCAGG | + |
Preference number: 3 (lower is better) Translates to: RRDLPEQLGEPS*FPDPSETSLCR Trigger: CCTGCAAAGACTTGTCTCAGAGGGATCCGGGAACCAAGATGGCTCCCCTAGTTGCTCAGGCAAATCCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 72 bp | GGACCCTTGAGCTCTCTCACACACTGTGCCACCACCTaGGCACATACACCAGCTGATAAAAGGCCTCCAACA | + |
Preference number: 3 (lower is better) Translates to: GPLSSLTHCATT*AHTPADKRPPT Trigger: TGTTGGAGGCCTTTTATCAGCTGGTGTATGTGCCCAGGTGGTGGCACAGTGTGTGAGAGAGCTCAAGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | ACAGCTTCTGGGACAGGCCTTGTTTCGGGCCTGCATCTTCTGCCAGGAGGCAGGCAACTCCTCAGAAAATaGGACATTGTACTACCGGAG | + |
Preference number: 3 (lower is better) Translates to: TASGTGLVSGLHLLPGGRQLLRK*DIVLPE Trigger: CTCCGGTAGTACAATGTCCAATTTTCTGAGGAGTTG...CCTGCCTCCTGGCAGAAGATGCAGGCCCGAAACAAGGCCTGTCCCAGAAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | GCCACAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTTGGGCACAGAGTCGTCCTTAGCAAGACCTaGGGCTTGGAATTCAGTACT | + |
Preference number: 3 (lower is better) Translates to: ATNPFQSAAALGHLGHRVVLSKT*GLEFST Trigger: AGTACTGAATTCCAAGCCCAAGGTCTTGCTAAGGAC...GACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | GAGGCTGTACCGGGACCTAGCAAACACAGAAGTGGATaGTTACAGTCAGCTATTGTCTGGATCACAGGGCCC | + |
Preference number: 3 (lower is better) Translates to: EAVPGPSKHRSG*LQSAIVWITGP Trigger: GGGCCCTGTGATCCAGACAATAGCTGACTGTAAGCATCCACTTCTGTGTTTGCTAGGTCCCGGTACAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | GTGGGACCTGAGACAGCATTAGGGAAGCAGAAAACCTaGCCTGACCAGGGTCAAAAGTCCCTTTCAGTTGGC | + |
Preference number: 3 (lower is better) Translates to: VGPETALGKQKT*PDQGQKSLSVG Trigger: GCCAACTGAAAGGGACTTTTGACCCTGGTCAGGCCAGGTTTTCTGCTTCCCTAATGCTGTCTCAGGTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | CCACTCCCATACCCACCCACTCCCACTTCTTGGTCCTaGTGTTCCCCTGTACTGAGGCATATAAAGTGTGCA | + |
Preference number: 3 (lower is better) Translates to: PLPYPPTPTSWS*CSPVLRHIKCA Trigger: TGCACACTTTATATGCCTCAGTACAGGGGAACACCAGGACCAAGAAGTGGGAGTGGGTGGGTATGGGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | TTGCTGCAAGAGGAGAGCTGGCCTGCAGAGAGTGTCTaGCCACTGAAACACAGGAGAAATCTAGTCTCCCAG | + |
Preference number: 3 (lower is better) Translates to: LLQEESWPAESV*PLKHRRNLVSQ Trigger: CTGGGAGACTAGATTTCTCCTGTGTTTCAGTGGTCAGACACTCTCTGCAGGCCAGCTCTCCTCTTGCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | GACCAGTACCGGCCTCCCAGAGCTCATGTCTCTAGCTaGATATGTATCAGAAGATGGCCTAGTCAGCCATCA | + |
Preference number: 3 (lower is better) Translates to: DQYRPPRAHVSS*ICIRRWPSQPS Trigger: TGATGGCTGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACATGAGCTCTGGGAGGCCGGTACTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | ACCAGATTTGAGGGGCACCTGTTATCCCAAATGGAGTaGCCTCCAAAAGCATTGTCACTCCACCCACCAAGC | + |
Preference number: 3 (lower is better) Translates to: TRFEGHLLSQME*PPKALSLHPPS Trigger: GCTTGGTGGGTGGAGTGACAATGCTTTTGGAGGGCACTCCATTTGGGATAACAGGTGCCCCTCAAATCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | CAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAGTaGAGGACTGTTCCTGTTTCTCCACATCCTCGCCAG | + |
Preference number: 3 (lower is better) Translates to: QSGCTSLQSHQQ*RTVPVSPHPRQ Trigger: CTGGCGAGGATGTGGAGAAACAGGAACAGTCCTCCACTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | ACAGCTTCTGGGACAGGCCTTGTTTCGGGCCTGCATCTTCTGCCAGGAGGCAGGATGATAAGAGAGCATTaGACAAAATCCAACACCCAT | + |
Preference number: 3 (lower is better) Translates to: TASGTGLVSGLHLLPGGRMIREH*TKSNTH Trigger: ATGGGTGTTGGATTTTGTCAAATGCTCTCTTATCAT...CCTGCCTCCTGGCAGAAGATGCAGGCCCGAAACAAGGCCTGTCCCAGAAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | CTCACTAGAGGACACAGGGACAGCATCCTAATTAACTaGTACGCTCTCTGGTCGAGTCAACTGGACAAGCTG | + |
Preference number: 3 (lower is better) Translates to: LTRGHRDSILIN*YALWSSQLDKL Trigger: CAGCTTGTCCAGTTGACTCGACCAGAGAGCGTAGCAGTTAATTAGGATGCTGTCCCTGTGTCCTCTAGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | GTCCTGGTGTTCCCCTGTACTGAGGCATATAAAGTGTaGAAGACCAATGGGCTTCTCTTTCCACTGATGGCC | + |
Preference number: 3 (lower is better) Translates to: VLVFPCTEAYKV*KTNGLLFPLMA Trigger: GGCCATCAGTGGAAAGAGAAGCCCATTGGTCTTGCACACTTTATATGCCTCAGTACAGGGGAACACCAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | CACCTGGGCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTGCTACTAATCCTTTCTTaGTCCTCAGAAAAGAGGAGG | + |
Preference number: 3 (lower is better) Translates to: HLGMESADTCNVPREQLLLLILS*SSEKRR Trigger: CCTCCTCTTTTCTGAGGACAAAGAAAGGATTAGTAG...CAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | CACCTGGGCATGGAGTCTGCAGACACCTGCAATGTCCCTAGAGAACAGCTTCTGAGTTCCTTCCGATCTTaGCATTTTCATTCCTCTGTT | + |
Preference number: 3 (lower is better) Translates to: HLGMESADTCNVPREQLLSSFRS*HFHSSV Trigger: AACAGAGGAATGAAAATGCAAAGATCGGAAGGAACT...CAGAAGCTGTTCTCTAGGGACATTGCAGGTGTCTGCAGACTCCATGCCCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCAGTGGGGATGGCCTCTaGGAGACAGGGGAGGAGAAA | + |
Preference number: 3 (lower is better) Translates to: RGKVSTLWSSFFLSFMYFSGDGL*ETGEEK Trigger: TTTCTCCTCCCCTGTCTCCAAGAGGCCATCCCCACT...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | AACACAACTTCTGTTCCATTCCAATCGCACTGGACCTaGGACAGCATTAGAGAAGCAGAAAACTCGGCCTGG | + |
Preference number: 3 (lower is better) Translates to: NTTSVPFQSHWT*DSIREAENSAW Trigger: CCAGGCCGAGTTTTCTGCTTCTCTAATGCTGTCTCAGGTCCAGTGCGATTGGAATGGAACAGAAGTTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | GGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTaGAAGCTTGTACAACCACTCTGGAAATCAGTCTGC | + |
Preference number: 3 (lower is better) Translates to: GERGTLLHCWWD*KLVQPLWKSVC Trigger: GCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | TGGACAGATGCTATACAGACACAGAGAGAACCCAAATaGCAGCCCAGGCTACTATACCCAGCCAAACTTTCA | + |
Preference number: 3 (lower is better) Translates to: WTDAIQTQREPK*QPRLLYPAKLS Trigger: TGAAAGTTTGGCTGGGTATAGTAGCCTGGGCTGGCATTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | CCATCTTGGTTCCCGGATCCCTCTGAGACAAGTCTTTaGAGGTTAGAGTGTGAACTACAGAAGCTAACAGCT | + |
Preference number: 3 (lower is better) Translates to: PSWFPDPSETSL*RLECELQKLTA Trigger: AGCTGTTAGCTTCTGTAGTTCACACTCTAACCTGCAAAGACTTGTCTCAGAGGGATCCGGGAACCAAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | AGAGCTCATGTCTCTAGCTGCATATGTATCAGAAGATaGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCAT | + |
Preference number: 3 (lower is better) Translates to: RAHVSSCICIRR*PSQPSLEREAH Trigger: ATGGGCCTCTCTTTCCAGTGATGGCTGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACATGAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | ATAGTAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAACCAGCTTTGGCATaGCAAGTTGCAGTAGGACTA | + |
Preference number: 3 (lower is better) Translates to: IVARSWKEPRCPSTEEWIQPALA*QVAVGL Trigger: TAGTCCTACTGCAACTTGCAATGCCAAAGCTGGTTG...TATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATGCTTACAGTCAGCTATaGTCTGGATCACAGGGCCCC | + |
Preference number: 3 (lower is better) Translates to: ESRSKIKIEACLTTGKLYAYSQL*SGSQGP Trigger: GGGGCCCTGTGATCCAGACAATAGCTGACTGTAAGC...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | TTGCTAGTGTATGCAATGGTGTCTGCGTTTGGGAGCTaGTTATGGGATGGATCCCTGGATATGGCAATCACT | + |
Preference number: 3 (lower is better) Translates to: LLVYAMVSAFGS*LWDGSLDMAIT Trigger: AGTGATTGCCATATCCAGGGATCCATCCCATAATCAGCTCCCAAACGCAGACACCATTGCATACACTAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | ACCAAAGACTATGAAAGCCAGAAGATCCTGGACAGATaGTATACAGACACAGAGAGAACCCAAATGCCAGCC | + |
Preference number: 3 (lower is better) Translates to: TKDYESQKILDR*YTDTERTQMPA Trigger: GGCTGGCATTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | CACTCTGGAAATCAGTCTGCCAACTCCTCAGAAAATTaGACATTGTACTACCGGAGGATCCTGCAATACCTC | + |
Preference number: 3 (lower is better) Translates to: HSGNQSANSSEN*TLYYRRILQYL Trigger: GAGGTATTGCAGGATCCTCCGGTAGTACAATGTCCAATTTTCTGAGGAGTTGGCAGACTGATTTCCAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | CAAGGTTGTGGAGAAAGAGGAACACTCCTCCATTGTTaGTGGGATTGCAAGCTTGTACAACCACTCTGGAAA | + |
Preference number: 3 (lower is better) Translates to: QGCGERGTLLHC*WDCKLVQPLWK Trigger: TTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | AACAGTCCTAGTTCGTCCTTAGCAAGACCTTGGGCTTaGAATTCAGTACTGCCCCTGGTATTACACTATCTC | + |
Preference number: 3 (lower is better) Translates to: NSPSSSLARPWA*NSVLPLVLHYL Trigger: GAGATAGTGTAATACCAGGGGCAGTACTGAATTCCAAGCCCAAGGTCTTGCTAAGGACGAACTAGGACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | CGTTTGGAAGCTGATTATGAGATGGATCCCCAGGTATaGCAGTCTCTAGTTGGTCTATTCTTTCGTCTCAGC | + |
Preference number: 3 (lower is better) Translates to: RLEADYEMDPQV*QSLVGLFFRLS Trigger: GCTGAGACGAAAGAATAGACCAACTAGAGACTGCCATACCTGGGGATCCATCTCATAATCAGCTTCCAAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | CGTCTCAAGGATAAAAGAGCCTCTGGTGGAATCACCATGTCTGACCTAAAGCTGGTATATCAACCAGCTTaGGCATTGCAAGTTGCAGTA | + |
Preference number: 3 (lower is better) Translates to: RLKDKRASGGITMSDLKLVYQPA*ALQVAV Trigger: TACTGCAACTTGCAATGCCAAAGCTGGTTGATATAC...CAGCTTTAGGTCAGACATGGTGATTCCACCAGAGGCTCTTTTATCCTTGAGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTGATATCTCTGCACCTTaGCTGCAAGAGGAGAGCTGG | + |
Preference number: 3 (lower is better) Translates to: ISEYTSCEFFCDWVTSLSDISAP*LQEESW Trigger: CCAGCTCTCCTCTTGCAGCAAAGGTGCAGAGATATC...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | GAGAGCAGGTCTAAGATAAAAATAGAGGCTTGCCTAACCACAGGTAAACTCTATAGCAAACCTGGACCCTaGAGCTCTCTCACACACTGT | + |
Preference number: 3 (lower is better) Translates to: ESRSKIKIEACLTTGKLYSKPGP*SSLTHC Trigger: ACAGTGTGTGAGAGAGCTCAAGGGTCCAGGTTTGCT...ATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | TTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCTaGGTTTGGGAGCTGATTATGGGATGGATCCCTGGA | + |
Preference number: 3 (lower is better) Translates to: FQQNLASVCNGV*VWELIMGWIPG Trigger: TCCAGGGATCCATCCCATAATCAGCTCCCAAACGCAGACACCATTGCATACACTAGCAAGATTTTGCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CCA 72 bp | CAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTaGAGCCAAGATGAAAGGATGGGCCATCTGAAGACT | + |
Preference number: 3 (lower is better) Translates to: QNTHGRSYRDKV*SQDERMGHLKT Trigger: AGTCTTCAGATGGCCCATCCTTTCATCTTGGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | CATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTaGAAATCAGTCTGCCAACTCCTCAGAAAATTGGAC | + |
Preference number: 3 (lower is better) Translates to: HCWWDCKLVQPL*KSVCQLLRKLD Trigger: GTCCAATTTTCTGAGGAGTTGGCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | ATGGCTAAGATAAACAATTCTGGTGACAGCAGATGCTaGCAAGGTTGTGGAGAAAGAGGAACACTCCTCCAT | + |
Preference number: 3 (lower is better) Translates to: MAKINNSGDSRC*QGCGERGTLLH Trigger: ATGGAGGAGTGTTCCTCTTTCTCCACAACCTTGCCAGCATCTGCTGTCACCAGAATTGTTTATCTTAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | CAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTaGAAGCTGATTATGAGATGGATCCCCAGGTATGGC | + |
Preference number: 3 (lower is better) Translates to: QNLASVCNGVSV*KLIMRWIPRYG Trigger: GCCATACCTGGGGATCCATCTCATAATCAGCTTCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR-3UTR CAA 90 bp | GAGACAAGTCTTTGCAGGTTAGAGTGTGAACTACAGAAGCTAACAGCTTCTGGGGGAAAGAGAGGCCCATaGGTCTTGCAAACTTTATAT | + |
Preference number: 3 (lower is better) Translates to: ETSLCRLECELQKLTASGGKRGP*VLQTLY Trigger: ATATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCC...CCCAGAAGCTGTTAGCTTCTGTAGTTCACACTCTAACCTGCAAAGACTTGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | TGGAAGGAGTTACAGAGACAAAGTTTGGAGCCAAGATaGAAGGATGGGCCATCTGAAGACTGCCTTATGAAT | + |
Preference number: 3 (lower is better) Translates to: WKELQRQSLEPR*KDGPSEDCLMN Trigger: ATTCATAAGGCAGTCTTCAGATGGCCCATCCTTTCATCTTGGCTCCAAACTTTGTCTCTGTAACTCCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 72 bp | CTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGTaGGAACCTGGAAGCATTCCCACTAAAATCTGGGAC | + |
Preference number: 3 (lower is better) Translates to: LQQTSSQHQSKW*EPGSIPTKIWD Trigger: GTCCCAGATTTTAGTGGGAATGCTTCCAGGTTCTCACCATTTACTTTGATGTTGGCTACTGGTTTGCTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR TCA 72 bp | CAATTGCTCTGTAGTACAGCTTTAGGTCAGGCATGGTaGTTCCACCAGAGGTTCTTTAATCCTTCAGAAGAG | + |
Preference number: 3 (lower is better) Translates to: QLLCSTALGQAW*FHQRFFNPSEE Trigger: CTCTTCTGAAGGATTAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTGTACTACAGAGCAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR GCA 72 bp | TGTCCTTCTTACCAGTTGGAAAATCTTCTGGATATATaGCCAGGAGAGGTATTGTTGGATCCTCGGGTAGTA | + |
Preference number: 3 (lower is better) Translates to: CPSYQLENLLDI*PGEVLLDPRVV Trigger: TACTACCCGAGGATCCAACAATACCTCTCCTGGGCATATATCCAGAAGATTTTCCAACTGGTAAGAAGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | GCATATGTATCAGAAGATGGCCTAGTCAGCCATCACTaGAAAGAGAGGCCCATTGGTCTTGCAAACTTTATA | + |
Preference number: 3 (lower is better) Translates to: AYVSEDGLVSHH*KERPIGLANFI Trigger: TATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCAGTGATGGCTGACTAGGCCATCTTCTGATACATATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | CTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATaGAAGGAGTTACAGAGACAAAGTTTGGAGCCAAGA | + |
Preference number: 3 (lower is better) Translates to: LCPFLELGTKHP*KELQRQSLEPR Trigger: TCTTGGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTaGGTTACCTCACTCAGTATGATGCCCTCCATGTCC | + |
Preference number: 3 (lower is better) Translates to: ISEYTSCEFFCD*VTSLSMMPSMS Trigger: GGACATGGAGGGCATCATACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | GAATTCAGTACTGCCCCTGGTATTACACTATCTCTTTaGGTAAAAGTTAGGTCACTGCCCTTCACAGGAATC | + |
Preference number: 3 (lower is better) Translates to: EFSTAPGITLSL*VKVRSLPFTGI Trigger: GATTCCTGTGAAGGGCAGTGACCTAACTTTTACTCAAAGAGATAGTGTAATACCAGGGGCAGTACTGAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | CTTCTTCTCAGCATCTCACAGAACCTTCTCCAAAATTaGCCACATAATTGGTCACAAAACAGGCCTCAACAG | + |
Preference number: 3 (lower is better) Translates to: LLLSISQNLLQN*PHNWSQNRPQQ Trigger: CTGTTGAGGCCTGTTTTGTGACCAATTATGTGGTCAATTTTGGAGAAGGTTCTGTGAGATGCTGAGAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | TTGTTGGATCCTCGGGTAGTAATATGTCCAATTTTCTaGGAAGGCACCAGACTGATTTCCAGAGTGGTTGTA | + |
Preference number: 3 (lower is better) Translates to: LLDPRVVICPIF*EGTRLISRVVV Trigger: TACAACCACTCTGGAAATCAGTCTGGTGCCTTCTCAGAAAATTGGACATATTACTACCCGAGGATCCAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | GTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTATaGTGCCCTCCATGTCCATCCATTTGCCTAAGAATT | + |
Preference number: 3 (lower is better) Translates to: VSSFVIGLPHSV*CPPCPSICLRI Trigger: AATTCTTAGGCAAATGGATGGACATGGAGGGCATCATACTGAGTGAGGTAACCCAATCACAAAAGAACTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | AATTACATTCAGATTCTACACAAAACCTCTCCTGTGTaGATCTGTCTGTTATTCATCCACGCTTTGCCCACC | + |
Preference number: 3 (lower is better) Translates to: NYIQILHKTSPV*ICLLFIHALPT Trigger: GGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAGAGGTTTTGTGTAGAATCTGAATGTAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | CAACAGAAAACAAGAGATAGAAGGGAGAATCTCAGGTaGAGAAGATTCCATAGGGAACATGGGCACAACAAT | + |
Preference number: 3 (lower is better) Translates to: QQKTRDRRENLR*RRFHREHGHNN Trigger: ATTGTTGTGCCCATGTTCCCTATGGAATCTTCTGCACCTGAGATTCTCCCTTCTATCTCTTGTTTTCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | GCAATGGCTTGTGCTGTTAGATCCAGAATCGACAAATaGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCA | + |
Preference number: 3 (lower is better) Translates to: AMACAVRSRIDK*DLIKLQSFCKA Trigger: TGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTGGATCTAACAGCACAAGCCATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | ACATTTTCTGTATCCATACCTCTGTTGAGGGGCATCTaGGTTCTTTCCAGCTTCTGGCTATTACAAATAAGG | + |
Preference number: 3 (lower is better) Translates to: TFSVSIPLLRGI*VLSSFWLLQIR Trigger: CCTTATTTGTAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGTATGGATACAGAAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCTGCCAGCACCATTTGTaGAAAATGCTCTCTGTTTTC | + |
Preference number: 3 (lower is better) Translates to: RGKVSTLWSSFFLSFMYFCQHHL*KMLSVF Trigger: GAAAACAGAGAGCATTTTCAACAAATGGTGCTGGCA...GAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | GCATGTAGCCTCAGCACAGAACTCGAGAATACTGCCTaGTTCTTGGTACTTACTGTATTTAAGTTACAGCTT | + |
Preference number: 3 (lower is better) Translates to: ACSLSTELENTA*FLVLTVFKLQL Trigger: AAGCTGTAACTTAAATACAGTAAGTACCAAGAATCAGGCAGTATTCTCGAGTTCTGTGCTGAGGCTACATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | GTGAAGTTTTTAAGTCCAAAGGGCCTCTCTTTCCAGTaGTGGCTGATTAGGCCATCTTTTGATACATATGCA | + |
Preference number: 3 (lower is better) Translates to: VKFLSPKGLSFQ*WLIRPSFDTYA Trigger: TGCATATGTATCAAAAGATGGCCTAATCAGCCATCACTGGAAAGAGAGGCCCTTTGGACTTAAAAACTTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | GATAGCCAATTTTACTATATTGATCCTGCCAATCCATaGGCATGGGAGGTCTTTCCATCTTCTGAGATCTTC | + |
Preference number: 3 (lower is better) Translates to: DSQFYYIDPANP*AWEVFPSSEIF Trigger: GAAGATCTCAGAAGATGGAAAGACCTCCCATGCTCATGGATTGGCAGGATCAATATAGTAAAATTGGCTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | TACATGATAACTGCCAGTTGTGCCAGCACCATTTGTTaGAAATGCTCTCTGTTTTCCACTGGAAGGTTTTTG | + |
Preference number: 3 (lower is better) Translates to: YMITASCASTIC*KCSLFSTGRFL Trigger: CAAAAACCTTCCAGTGGAAAACAGAGAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | GGCCTCAACAGATACAAAAATATTGAAATTGTCCCATaGATCCTATCAGATCACCATGGACTAAGGCTGATC | + |
Preference number: 3 (lower is better) Translates to: GLNRYKNIEIVP*ILSDHHGLRLI Trigger: GATCAGCCTTAGTCCATGGTGATCTGATAGGATGCATGGGACAATTTCAATATTTTTGTATCTGTTGAGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | ACTATGGAGAGCAGGTCTAAGATAAAAATAGAGGCTTaGCTAACCACAGGTAAACTCTATAACCTCAGACGA | + |
Preference number: 3 (lower is better) Translates to: TMESRSKIKIEA*LTTGKLYNLRR Trigger: TCGTCTGAGGTTATAGAGTTTACCTGTGGTTAGGCAAGCCTCTATTTTTATCTTAGACCTGCTCTCCATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | CCATTGGTCTACTTGTCTGTCGCTATACCAGTTCCATaGAGTTTTTATCACAATTGCTCTGTAGTACAGCTT | + |
Preference number: 3 (lower is better) Translates to: PLVYLSVAIPVP*SFYHNCSVVQL Trigger: AAGCTGTACTACAGAGCAATTGTGATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | GATTTTTCACCAAAGACTATGAAAGCCAGAAGATCCTaGACAGATGCTATACAGACACAGAGAGAACCCAAA | + |
Preference number: 3 (lower is better) Translates to: DFSPKTMKARRS*TDAIQTQREPK Trigger: TTTGGGTTCTCTCTGTGTCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | GCCTCAGCACAGAACTCGAGAATACTGCCTGATTCTTaGTACTTACTGTATTTAAGTTACAGCTTACACAGT | + |
Preference number: 3 (lower is better) Translates to: ASAQNSRILPDS*YLLYLSYSLHS Trigger: ACTGTGTAAGCTGTAACTTAAATACAGTAAGTACCAAGAATCAGGCAGTATTCTCGAGTTCTGTGCTGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | TCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTAAGAGGCCCATTGGTCTaGCAAACTTTATATGTCTCA | + |
Preference number: 3 (lower is better) Translates to: SVSTHHVSSFVIGLPHSVRGPLV*QTLYVS Trigger: TGAGACATATAAAGTTTGCAAGACCAATGGGCCTCT...TACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATACACAACCCAACATTTaGCTGTTTACAGAAAACCCA | + |
Preference number: 3 (lower is better) Translates to: FTFSFRKLACSLSTELENTQPNI*LFTENP Trigger: TGGGTTTTCTGTAAACAGCAAAATGTTGGGTTGTGT...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTCACTGTGCTCTCTCCTaGGGCTTATTTGAAAATTTT | + |
Preference number: 3 (lower is better) Translates to: ISEYTSCEFFCDWVTSLSHCALS*GLFENF Trigger: AAAATTTTCAAATAAGCCCAAGGAGAGAGCACAGTG...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | TGGTCACAAAACAGGCCTCAACAGATACAAAAATATTaGAATTGTCCCATGCATCCTATCAGATCACCATGG | + |
Preference number: 3 (lower is better) Translates to: WSQNRPQQIQKY*NCPMHPIRSPW Trigger: CCATGGTGATCTGATAGGATGCATGGGACAATTTCAATATTTTTGTATCTGTTGAGGCCTGTTTTGTGACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | CCACAGGAAATAAATAGCTTTCTGTACATGAGTTGCTaGGCCCTTTCACATTCTCTTTTAGAAAACTGGCAT | + |
Preference number: 3 (lower is better) Translates to: PQEINSFLYMSC*ALSHSLLENWH Trigger: ATGCCAGTTTTCTAAAAGAGAATGTGAAAGGGCCCAGCAACTCATGTACAGAAAGCTATTTATTTCCTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTTACTTCATTTGTACCTaGCAAGTATGTCACCCAACT | + |
Preference number: 3 (lower is better) Translates to: SSKFCLCNSFNGCFVPISYFICT*QVCHPT Trigger: AGTTGGGTGACATACTTGCAAGGTACAAATGAAGTA...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR-3UTR CAA 90 bp | AGCTCCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTTGTTCCCATTTCTATCCGGTTACTTCATTaGTACCTTGCAAGTATGTCA | + |
Preference number: 3 (lower is better) Translates to: SSKFCLCNSFNGCFVPISIRLLH*YLASMS Trigger: TGACATACTTGCAAGGTACAAATGAAGTAACCGGAT...AGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | CTATCAGAATTACACCAGATTTTTCACCAAAGACTATaGAAGCCAGAAGATCCTGGACAGATGCTATACAGA | + |
Preference number: 3 (lower is better) Translates to: LSELHQIFHQRL*KPEDPGQMLYR Trigger: TCTGTATAGCATCTGTCCAGGATCTTCTGGCTTTCATAGTCTTTGGTGAAAAATCTGGTGTAATTCTGATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | TTATTCCTATCTCCCTGTACTAAGGTCAAATCTAAGTaGATTAAGGAACTCCACATAAAACCAGAGAGAGTG | + |
Preference number: 3 (lower is better) Translates to: LFLSPCTKVKSK*IKELHIKPERV Trigger: CACTCTCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAGTACAGGGAGATAGGAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTaGTATAGTGACAGACAAGTAGACCAATGGGATAGA | + |
Preference number: 3 (lower is better) Translates to: YYRAIVIKTAWY*YSDRQVDQWDR Trigger: TCTATCCCATTGGTCTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | TTGGTACTTACTGTATTTAAGTTACAGCTTACACAGTaGCAGTTTGGACCACTTACTCTAAAGACAGGCTTT | + |
Preference number: 3 (lower is better) Translates to: LVLTVFKLQLTQ*QFGPLTLKTGF Trigger: AAAGCCTGTCTTTAGAGTAAGTGGTCCAAACTGCCACTGTGTAAGCTGTAACTTAAATACAGTAAGTACCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR GCA 72 bp | TATCCAGAAGATGTTCCAACCAGTAAGAAGGACACATaGTCCACTATGTTCATATCAGCCTTATTTATAGTA | + |
Preference number: 3 (lower is better) Translates to: YPEDVPTSKKDT*STMFISALFIV Trigger: TACTATAAATAAGGCTGATATGAACATAGTGGAGCATGTGTCCTTCTTACTGGTTGGAACATCTTCTGGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | TTTTCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTaGTTTAAGTGGAGTTCCTTAATCCACTTAGATTTG | + |
Preference number: 3 (lower is better) Translates to: FSHFLLYKFQCL*FKWSSLIHLDL Trigger: CAAATCTAAGTGGATTAAGGAACTCCACTTAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR TCA 72 bp | GAACCAATAAGAGGTGATAAAAGAATCAGGGATGACTaGAATAGTGAAATATTATCACACTATGGAGAGCAG | + |
Preference number: 3 (lower is better) Translates to: EPIRGDKRIRDD*NSEILSHYGEQ Trigger: CTGCTCTCCATAGTGTGATAATATTTCACTATTTCAGTCATCCCTGATTCTTTTATCACCTCTTATTGGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | GCTACTATACCCAGCCAAACTTTCAATTACTATAGATaGAGAAAGCAAAGTATTCCACGACAAAACCAAATT | + |
Preference number: 3 (lower is better) Translates to: ATIPSQTFNYYR*RKQSIPRQNQI Trigger: AATTTGGTTTTGTCGTGGAATACTTTGCTTTCTCCATCTATAGTAATTGAAAGTTTGGCTGGGTATAGTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTAAGTaGAGTTCCTTAATCCACTTAGATTTGACCTTAGTA | + |
Preference number: 3 (lower is better) Translates to: FLLYKFQCLWFK*SSLIHLDLTLV Trigger: TACTAAGGTCAAATCTAAGTGGATTAAGGAACTCCACTTAAACCAGAGACACTGAAACTTATAGAGGAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CCA 72 bp | AATAACAACATAAATAATGGAAAGCCAACATTCACGTaGAAACTGAACAACAGTCTTCTCAATGATACCTTG | + |
Preference number: 3 (lower is better) Translates to: NNNINNGKPTFT*KLNNSLLNDTL Trigger: CAAGGTATCATTGAGAAGACTGTTGTTCAGTTTCCACGTGAATGTTGGCTTTCCATTATTTATGTTGTTATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | CGGTCAGCGCCAGCACCAGGTCACCTGGGCACAAAGTaGGCAGACACCCCCAAGGTCCCTAGAGGACTCTCC | + |
Preference number: 4 (lower is better) Translates to: RSAPAPGHLGTK*ADTPKVPRGLS Trigger: GGAGAGTCCTCTAGGGACCTTGGGGGTGTCTGCCAACTTTGTGCCCAGGTGACCTGGTGCTGGCGCTGACCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | ATGTTACAGTCTCCACTCTGGCAACCTGTGCCCCTCTaGCCTCCCTCCCTGCATGTTGGGGGACAAGGGCCC | + |
Preference number: 4 (lower is better) Translates to: MLQSPLWQPVPL*PPSLHVGGQGP Trigger: GGGCCCTTGTCCCCCAACATGCAGGGAGGGAGGCAAGAGGGGCACAGGTTGCCAGAGTGGAGACTGTAACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | CAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTaGGGCACAGAGTCAGCAGACTCCTCCAAGGTCCCT | + |
Preference number: 4 (lower is better) Translates to: QIPSSLQQHWVT*GTESADSSKVP Trigger: AGGGACCTTGGAGGAGTCTGCTGACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | AAACCTGGCCTGACCAGGGTCAAAAGTCCCTTTCAGTaGGCACCAGCACCTGGTCACCTGGTCACCTGGTCA | + |
Preference number: 4 (lower is better) Translates to: KPGLTRVKSPFQ*APAPGHLVTWS Trigger: TGACCAGGTGACCAGGTGACCAGGTGCTGGTGCCAACTGAAAGGGACTTTTGACCCTGGTCAGGCCAGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | CCTCGCCCCACTCCCATACCCACCCACTCCCACTTCTaGGTCCTGGTGTTCCCCTGTACTGAGGCATATAAA | + |
Preference number: 4 (lower is better) Translates to: PRPTPIPTHSHF*VLVFPCTEAYK Trigger: TTTATATGCCTCAGTACAGGGGAACACCAGGACCAAGAAGTGGGAGTGGGTGGGTATGGGAGTGGGGCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | TCTCCTGTGTGCATCTGTCTGTTATTCATCCACGCTTaGCCCACCCGCATCGAGAGACCCCATTCCACGCAG | + |
Preference number: 4 (lower is better) Translates to: SPVCICLLFIHA*PTRIERPHSTQ Trigger: CTGCGTGGAATGGGGTCTCTCGATGCGGGTGGGCAAAGCGTGGATGAATAACAGACAGATGCACACAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | CAGGAGGCAGGTCCGAATGTAGATATCTCTGCACCTTaGCTGCAAGAGGAGAGCTGGCCTGCAGAGAGTGTC | + |
Preference number: 4 (lower is better) Translates to: QEAGPNVDISAP*LQEESWPAESV Trigger: GACACTCTCTGCAGGCCAGCTCTCCTCTTGCAGCAAAGGTGCAGAGATATCTACATTCGGACCTGCCTCCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | CATAGAATGACCAGCAGTCTCAGCAAACCTGGACCCTaGAGCTCTCTCACACACTGTGCCACCACCTGGGCA | + |
Preference number: 4 (lower is better) Translates to: HRMTSSLSKPGP*SSLTHCATTWA Trigger: TGCCCAGGTGGTGGCACAGTGTGTGAGAGAGCTCAAGGGTCCAGGTTTGCTGAGACTGCTGGTCATTCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
CDS-3UTR TCA 90 bp | GCCACAAATCCCTTCCAGTCTGCAGCAGCACTGGGTCACCTTGGGCACAGAGTCTTTAGAGGAACCACCTaGAGAATGTTTTTGCACACT | + |
Preference number: 4 (lower is better) Translates to: ATNPFQSAAALGHLGHRVFRGTT*RMFLHT Trigger: AGTGTGCAAAAACATTCTTCAGGTGGTTCCTCTAAA...GACTCTGTGCCCAAGGTGACCCAGTGCTGCTGCAGACTGGAAGGGATTTGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | GAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTaGTACAACCACTCTGGAAATCAGTCTGCCAACTCC | + |
Preference number: 4 (lower is better) Translates to: EEHSSIVGGIAS*YNHSGNQSANS Trigger: GGAGTTGGCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | CTGGCAAGGTTGTGGAGAAAGAGGAACACTCCTCCATaGTTGGTGGGATTGCAAGCTTGTACAACCACTCTG | + |
Preference number: 4 (lower is better) Translates to: LARLWRKRNTPP*LVGLQACTTTL Trigger: CAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
CDS-3UTR TCA 90 bp | CGTCTCAAGGATAAAAGAGCCTCTGGTGGAATCACCATGTCTGACCTAAAGCTGCACCCAGGCAGTCACTaGAAACAAGATGCATGTCCT | + |
Preference number: 4 (lower is better) Translates to: RLKDKRASGGITMSDLKLHPGSH*KQDACP Trigger: AGGACATGCATCTTGTTTTCAGTGACTGCCTGGGTG...CAGCTTTAGGTCAGACATGGTGATTCCACCAGAGGCTCTTTTATCCTTGAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | GCAAGGTTGTGGAGAAAGAGGAACACTCCTCCATTGTaGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: ARLWRKRNTPPL*VGLQACTTTLE Trigger: TTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAACCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | CCACTCTGGAAATCAGTCTGCCAACTCCTCAGAAAATaGGACATTGTACTACCGGAGGATCCTGCAATACCT | + |
Preference number: 4 (lower is better) Translates to: PLWKSVCQLLRK*DIVLPEDPAIP Trigger: AGGTATTGCAGGATCCTCCGGTAGTACAATGTCCAATTTTCTGAGGAGTTGGCAGACTGATTTCCAGAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | TGTTACACCTATAAGGTTTCAGATCCCTCCAACTCCTaGAGTACTTTCTCTAGCTCCTCCATTGGGGGCCAT | + |
Preference number: 4 (lower is better) Translates to: CYTYKVSDPSNS*STFSSSSIGGH Trigger: ATGGCCCCCAATGGAGGAGCTAGAGAAAGTACTCAAGGAGTTGGAGGGATCTGAAACCTTATAGGTGTAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | AAGACACAGCTATATCTGGGTCCTTTCAGCAAAATCTaGCTAGTGTATGCAATGGTGTCTGCGTTTGGGAGC | + |
Preference number: 4 (lower is better) Translates to: KTQLYLGPFSKI*LVYAMVSAFGS Trigger: GCTCCCAAACGCAGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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CDS-3UTR CCA 90 bp | CGTCTCAAGGATAAAAGAGCCTCTGGTGGAATCACCATGTCTGACCTAAAGCTGGTGTGTCGAAGGAGATaGCCAGGTATAGAAAAATAT | + |
Preference number: 4 (lower is better) Translates to: RLKDKRASGGITMSDLKLVCRRR*PGIEKY Trigger: ATATTTTTCTATACCTGGCCATCTCCTTCGACACAC...CAGCTTTAGGTCAGACATGGTGATTCCACCAGAGGCTCTTTTATCCTTGAGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | CCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTaGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACA | + |
Preference number: 4 (lower is better) Translates to: PNFVSVTPSMGV*FPILRRGKVST Trigger: TGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | AAGAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTaGCTAGTGTATGCAATGGTGTCAGCGTTTGGAAGC | + |
Preference number: 4 (lower is better) Translates to: KRQLYQGPFSKI*LVYAMVSAFGS Trigger: GCTTCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACCCTGATATAGCTGTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
CDS-3UTR TCA 90 bp | TTCACATTCTCTTTTAGAAAACTGGCATGTAGCCTCAGCACAGAACTCGAGAATTACTCCAAGAGTTGGTaGGTCCCAGGAACACAAACT | + |
Preference number: 4 (lower is better) Translates to: FTFSFRKLACSLSTELENYSKSW*VPGTQT Trigger: AGTTTGTGTTCCTGGGACTCACCAACTCTTGGAGTA...ATTCTCGAGTTCTGTGCTGAGGCTACATGCCAGTTTTCTAAAAGAGAATGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | TCATCTCACACACAACCCCATCTACTAATCCTTTCTTaGTCCTCAGAAAAGAGGAGGCCTCCTAAGTATATC | + |
Preference number: 4 (lower is better) Translates to: SSHTQPHLLILS*SSEKRRPPKYI Trigger: GATATACTTAGGAGGCCTCCTCTTTTCTGAGGACAAAGAAAGGATTAGTAGATGGGGTTGTGTGTGAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | ATCCATCCCATAATCAGCCTCCAAAAGCTCACACAATaGCATACACTAGCAAGGTTTTGCTTAAAGGACCCA | + |
Preference number: 4 (lower is better) Translates to: IHPIISLQKLTQ*HTLARFCLKDP Trigger: TGGGTCCTTTAAGCAAAACCTTGCTAGTGTATGCAATTGTGTGAGCTTTTGGAGGCTGATTATGGGATGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | AAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTaGCCCCTTCTTAGAATTGGGAACAAAACACCCATG | + |
Preference number: 4 (lower is better) Translates to: KLKKNEDQSVDT*PLLRIGNKTPM Trigger: CATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
||
3UTR CAA 72 bp | GTTAGATCCAGAATCGACAAATGGGACCTCATAAAATaGCAAAGCTTCTGTAAGGCAAGAGACACCACTGTC | + |
Preference number: 4 (lower is better) Translates to: VRSRIDKWDLIK*QSFCKARDTTV Trigger: GACAGTGGTGTCTCTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTGGATCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | CTGTTTCTTTCTAATCACTTGGGACCTGAGATAGCATaGAGTGGAACACAACTTCTGTTCCATTCCAATCGC | + |
Preference number: 4 (lower is better) Translates to: LFLSNHLGPEIA*SGTQLLFHSNR Trigger: GCGATTGGAATGGAACAGAAGTTGTGTTCCACTCAATGCTATCTCAGGTCCCAAGTGATTAGAAAGAAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | CCAAATTTTGTCTCTGTAACTCCTTCAATGGGTGTTTaGTTCCCATTTCTAGGAAGGGGCAAAGTGTCCACA | + |
Preference number: 4 (lower is better) Translates to: PNFVSVTPSMGV*FPFLGRGKVST Trigger: TGTGGACACTTTGCCCCTTCCTAGAAATGGGAACAAAACACCCATTGAAGGAGTTACAGAGACAAAATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | CTTCTACATGATAACTGCCAGTTGTGCCAGCACCATTaGTTGAAAATGCTCTCTGTTTTCCACTGGAAGGTT | + |
Preference number: 4 (lower is better) Translates to: LLHDNCQLCQHH*LKMLSVFHWKV Trigger: AACCTTCCAGTGGAAAACAGAGAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGTAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | GTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTaGGTCTTCGTTCTTCTTGAGTTTCATGTATTTCGC | + |
Preference number: 4 (lower is better) Translates to: VPNSKKGQSVHT*VFVLLEFHVFR Trigger: GCGAAATACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | GTTCCCATTTCTAGGAAGGGGCAAAGTGTCCACACTTaGGTCTTCATTCTTCTTGAGTTTCATGAGTTTAAC | + |
Preference number: 4 (lower is better) Translates to: VPISRKGQSVHT*VFILLEFHEFN Trigger: GTTAAACTCATGAAACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCCTAGAAATGGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | CTACATGATAACTGCCAGTTGTGCCAGCACCATTTGTaGAAAATGCTCTCTGTTTTCCACTGGAAGGTTTTT | + |
Preference number: 4 (lower is better) Translates to: LHDNCQLCQHHL*KMLSVFHWKVF Trigger: AAAAACCTTCCAGTGGAAAACAGAGAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | GGATCAATTCGCATTCTTCTACATGATAACTGCCAGTaGTGCCAGCACCATTTGTTGAAAATGCTCTCTGTT | + |
Preference number: 4 (lower is better) Translates to: GSIRILLHDNCQ*CQHHLLKMLSV Trigger: AACAGAGAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGTAGAAGAATGCGAATTGATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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CDS-3UTR TCA 90 bp | TGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGTCTCAGTAAAGGGGAAACTACAAAAGCCAGTTaGATCAGAGAATGCATAAGG | + |
Preference number: 4 (lower is better) Translates to: WKERPIGLANFICLSKGETTKAS*IRECIR Trigger: CCTTATGCATTCTCTGATTCAACTGGCTTTTGTAGT...TTCCCCTTTACTGAGACATATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | CTATTCTATTCCAATCGCGTGGAACCTGAGACAATATaGAGTGAAACACAACTTCTGTTCCATTCCAATCAC | + |
Preference number: 4 (lower is better) Translates to: LFYSNRVEPETI*SETQLLFHSNH Trigger: GTGATTGGAATGGAACAGAAGTTGTGTTTCACTCAATATTGTCTCAGGTTCCACGCGATTGGAATAGAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | GTGAGTGTAACACAACTTCTGTTTCTTTCTAATCACTaGGGACCTGAGATAGCATTGAGTGGAACACAACTT | + |
Preference number: 4 (lower is better) Translates to: VSVTQLLFLSNH*GPEIALSGTQL Trigger: AAGTTGTGTTCCACTCAATGCTATCTCAGGTCCCAAGTGATTAGAAAGAAACAGAAGTTGTGTTACACTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | GCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTaGTTGATTCTTGATCTTACAGCACAAGCCATTGGA | + |
Preference number: 4 (lower is better) Translates to: ALQKLCNFMRSH*LILDLTAQAIG Trigger: TCCAATGGCTTGTGCTGTAAGATCAAGAATCAACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | TTGGAAAATCTTCTGGATATATGCCCAGGAGAGGTATaGTTGGATCCTCGGGTAGTAATATGTCCAATTTTC | + |
Preference number: 4 (lower is better) Translates to: LENLLDICPGEV*LDPRVVICPIF Trigger: GAAAATTGGACATATTACTACCCGAGGATCCAACAATACCTCTCCTGGGCATATATCCAGAAGATTTTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | CATTTCTGGGTCTACAATTCTATTCCATTGGTCTACTaGTCTGTCGCTATACCAGTTCCATGCAGTTTTTAT | + |
Preference number: 4 (lower is better) Translates to: HFWVYNSIPLVY*SVAIPVPCSFY Trigger: ATAAAAACTGCATGGAACTGGTATAGCGACAGACAAGTAGACCAATGGAATAGAATTGTAGACCCAGAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | ACCTTAGATATGGCTGACTTTGTCTCAATTATTTTATaGCCTAGTTCCTTCCGATCTTTGCATTTTCATTCC | + |
Preference number: 4 (lower is better) Translates to: TLDMADFVSIIL*PSSFRSLHFHS Trigger: GGAATGAAAATGCAAAGATCGGAAGGAACTAGGCAATAAAATAATTGAGACAAAGTCAGCCATATCTAAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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3UTR CAA 72 bp | GTCTCAATTATTTTATTGCCTAGTTCCTTCCGATCTTaGCATTTTCATTCCTCTGTTCTCTGTAAGAATCAT | + |
Preference number: 4 (lower is better) Translates to: VSIILLPSSFRS*HFHSSVLCKNH Trigger: ATGATTCTTACAGAGAACAGAGGAATGAAAATGCAAAGATCGGAAGGAACTAGGCAATAAAATAATTGAGAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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CDS-3UTR CAA 90 bp | ATCAGTGAGTACACATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGTTACTACAAAAGCCAGTaGAATCAGAGAATGCATAAG | + |
Preference number: 5 (lower is better) Translates to: ISEYTSCEFFCDWVTSLSYYKSQ*NQRMHK Trigger: CTTATGCATTCTCTGATTCAACTGGCTTTTGTAGTA...ACTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATGTGTACTCACTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099604.6 |
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CDS TCA 72 bp | CAGAGAATGCATAAGGCCAACCACCCAGGCAGTCACTaGAAACAAGATGCATGTCCTCGGGCTCATAATGGT | + |
Preference number: 6 (lower is better) Translates to: QRMHKANHPGSH*KQDACPRAHNG Trigger: ACCATTATGAGCCCGAGGACATGCATCTTGTTTTCAGTGACTGCCTGGGTGGTTGGCCTTATGCATTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099604.6 ENSMUST00000099606.2 |
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CDS TCA 72 bp | AGCAGAAAGGGTAGACAGGGCTTTAGAGGAACCACCTaGAGAATGTTTTTGCACACTGATTATGATAACAAT | + |
Preference number: 6 (lower is better) Translates to: SRKGRQGFRGTT*RMFLHTDYDNN Trigger: ATTGTTATCATAATCAGTGTGCAAAAACATTCTTCAGGTGGTTCCTCTAAAGCCCTGTCTACCCTTTCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099604.6 ENSMUST00000099606.2 |