Pregenerated sensors for OLFR1303 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093804Ensembl transcript IDs: ENSMUST00000099609.2, ENSMUST00000216114.3
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCTGACATGGGGGCTGAAGTCAGGCGCCAGACAGCAGGCACTCTaGATCTTATCTTCAGAGCATAGATCCTCCTTGACAGCCTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: LLTWGLKSGARQQAL*ILSSEHRSSLTALG Trigger: ACCCAAGGCTGTCAAGGAGGATCTATGCTCTGAAGATAAGATGCAGAGTGCCTGCTGTCTGGCGCCTGACTTCAGCCCCCATGTCAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR TCA 90 bp | GACAGCAGGCACTCTGCATCTTATCTTCAGAGCATAGATCCTCCTTaGCAGCCTTGGGTCTCAGGCTGGGCTCAGGCATACATAACTCAT | + |
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Preference number: 1 (lower is better) Translates to: DSRHSASYLQSIDPP*QPWVSGWAQAYITH Trigger: ATGAGTTATGTATGCCTGAGCCCAGCCTGAGACCCAAGGCTGTCAAGGAGGATCTATGCTCTGAAGATAAGATGCAGAGTGCCTGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR TCA 90 bp | AGCATTGCAGAGCTAGCTCTACCAGCAGCCCCTCTCACAGTTCATTaGGTCCTATTTATACTCCCTCCAAGCATCAGGTGTCCTCAATGG | + |
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Preference number: 1 (lower is better) Translates to: SIAELALPAAPLTVH*VLFILPPSIRCPQW Trigger: CCATTGAGGACACCTGATGCTTGGAGGGAGTATAAATAGGACTCAATGAACTGTGAGAGGGGCTGCTGGTAGAGCTAGCTCTGCAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CCA 90 bp | TGGGTCTCAGGCTGGGCTCAGGCATACATAACTCATGTCCTTGGATaGCTTGGGAGTTCAGGAAGAGATAGTGAAGAGGGGACTATAATT | + |
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Preference number: 1 (lower is better) Translates to: WVSGWAQAYITHVLG*LGSSGRDSEEGTII Trigger: AATTATAGTCCCCTCTTCACTATCTCTTCCTGAACTCCCAAGCCATCCAAGGACATGAGTTATGTATGCCTGAGCCCAGCCTGAGACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR TCA 90 bp | CATGAGTCAGCAGGAGGATCAGCAGGGATGTCAGAAGTTCTCAGCTaGGCCTCTCTGAACAAAGCAAAAATCAGAGAATACACAAGACCA | + |
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Preference number: 1 (lower is better) Translates to: HESAGGSAGMSEVLS*ASLNKAKIREYTRP Trigger: TGGTCTTGTGTATTCTCTGATTTTTGCTTTGTTCAGAGAGGCTCAGCTGAGAACTTCTGACATCCCTGCTGATCCTCCTGCTGACTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR TCA 90 bp | CATTTTCAGGAATTCAACAGTTCAGTTCAAATGTCAGCAGCAGCCTaGTCCACTGGCAAACACTTCACAGATATGCCAGAGTCCAATTCT | + |
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Preference number: 1 (lower is better) Translates to: HFQEFNSSVQMSAAA*STGKHFTDMPESNS Trigger: AGAATTGGACTCTGGCATATCTGTGAAGTGTTTGCCAGTGGATCAGGCTGCTGCTGACATTTGAACTGAACTGTTGAATTCCTGAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR GCA 90 bp | ATAAGTAAACCTGTTTACAAATTGTTCTTTGGAGCAAATCCCTTCTaGATTTTCAGGAATTCAACAGTTCAGTTCAAATGTCAGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: ISKPVYKLFFGANPF*IFRNSTVQFKCQQQ Trigger: CTGCTGCTGACATTTGAACTGAACTGTTGAATTCCTGAAAATGCAGAAGGGATTTGCTCCAAAGAACAATTTGTAAACAGGTTTACTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CAA 90 bp | GCACTCTGCATCTTATCTTCAGAGCATAGATCCTCCTTGACAGCCTaGGGTCTCAGGCTGGGCTCAGGCATACATAACTCATGTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: ALCILSSEHRSSLTA*GLRLGSGIHNSCPW Trigger: CCAAGGACATGAGTTATGTATGCCTGAGCCCAGCCTGAGACCCAAGGCTGTCAAGGAGGATCTATGCTCTGAAGATAAGATGCAGAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CAA 90 bp | AGACAGCAGGCACTCTGCATCTTATCTTCAGAGCATAGATCCTCCTaGACAGCCTTGGGTCTCAGGCTGGGCTCAGGCATACATAACTCA | + |
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Preference number: 2 (lower is better) Translates to: RQQALCILSSEHRSS*TALGLRLGSGIHNS Trigger: TGAGTTATGTATGCCTGAGCCCAGCCTGAGACCCAAGGCTGTCAAGGAGGATCTATGCTCTGAAGATAAGATGCAGAGTGCCTGCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CAA 90 bp | AAGCATTGCAGAGCTAGCTCTACCAGCAGCCCCTCTCACAGTTCATaGAGTCCTATTTATACTCCCTCCAAGCATCAGGTGTCCTCAATG | + |
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Preference number: 2 (lower is better) Translates to: KHCRASSTSSPSHSS*SPIYTPSKHQVSSM Trigger: CATTGAGGACACCTGATGCTTGGAGGGAGTATAAATAGGACTCAATGAACTGTGAGAGGGGCTGCTGGTAGAGCTAGCTCTGCAATGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGGCATACATAACTCATGTCCTTGGATGGCTTGGGAGTTCAGGAAGAGATGACATGACTCAGCAGTaGCAACATGACCTAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: AQAYITHVLGWLGSSGRDDMTQQ*QHDLAE Trigger: CTCTGCTAGGTCATGTTGTCACTGCTGAGTCATGTC...ATCTCTTCCTGAACTCCCAAGCCATCCAAGGACATGAGTTATGTATGCCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR CCA 90 bp | AGACAGCAGGCACTCTGCATCTTATCTTCAGAGCATAGATCCTCCTTGACAGCCCCAAGTCTGCAGAAGTaGCAAGAAGCTCCAAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: RQQALCILSSEHRSSLTAPSLQK*QEAPRN Trigger: ATTTCTTGGAGCTTCTTGCCACTTCTGCAGACTTGG...GGCTGTCAAGGAGGATCTATGCTCTGAAGATAAGATGCAGAGTGCCTGCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CAA 90 bp | GTCCTATTTATACTCCCTCCAAGCATCAGGTGTCCTCAATGGTTCTaGCCTCACCAAGTGTCTTGCTCACGAGTCTGTCTTCACAAAACA | + |
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Preference number: 2 (lower is better) Translates to: VLFILPPSIRCPQWF*PHQVSCSRVCLHKT Trigger: TGTTTTGTGAAGACAGACTCGTGAGCAAGACACTTGGTGAGGCAAGAACCATTGAGGACACCTGATGCTTGGAGGGAGTATAAATAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR TCA 90 bp | GAGATTGTGAAGGGCTCGCTTTCTCACGGGATGGTCTCTGACAAATTATTATTTTCAGCAGTGACAACATaGCCTAGCAGAGACATCAAG | + |
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Preference number: 2 (lower is better) Translates to: EIVKGSLSHGMVSDKLLFSAVTT*PSRDIK Trigger: CTTGATGTCTCTGCTAGGTCATGTTGTCACTGCTGA...AAATAATAATTTGTCAGAGACCATCCCGTGAGAAAGCGAGCCCTTCACAATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCTCTCACAGTTCATTGAGTCCTATTTATACTCCCTCCAAGCATCAGGTGGTGCATTTCTCTCCATaGAGTCATAACAAATGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SPSHSSLSPIYTPSKHQVVHFSP*SHNKWS Trigger: ACTCCATTTGTTATGACTGCATGGAGAGAAATGCAC...CACCTGATGCTTGGAGGGAGTATAAATAGGACTCAATGAACTGTGAGAGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGCAGCCTGATCCACTGGCAAACACTTCACAGATATGCCAGAGTCCAATTTGCAGTCATAACAAATaGAGTGCAAAAACGAATGTA | + |
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Preference number: 2 (lower is better) Translates to: QQQPDPLANTSQICQSPICSHNK*SAKTNV Trigger: TACATTCGTTTTTGCACTCCATTTGTTATGACTGCA...AATTGGACTCTGGCATATCTGTGAAGTGTTTGCCAGTGGATCAGGCTGCTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR CCA 90 bp | CACTGGCAAACACTTCACAGATATGCCAGAGTCCAATTCTGTAAAGTTGGGATAATCTGTGTCCACTTCTaGAAAAGGTCATGTTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: HWQTLHRYARVQFCKVGIICVHF*KRSCFG Trigger: TCCAAAACATGACCTTTTCCAGAAGTGGACACAGAT...TATCCCAACTTTACAGAATTGGACTCTGGCATATCTGTGAAGTGTTTGCCAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR CCA 90 bp | CCTATCAAGGTCTCATTTATTAGGCTGAGGTGCCTTGTTTTTAAAGCATACATCCGCTTTCTCACGGGATaGTCTCTGACAAATTATTAT | + |
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Preference number: 2 (lower is better) Translates to: PIKVSFIRLRCLVFKAYIRFLTG*SLTNYY Trigger: ATAATAATTTGTCAGAGACCATCCCGTGAGAAAGCG...GATGTATGCTTTAAAAACAAGGCACCTCAGCCTAATAAATGAGACCTTGATAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR GCA 72 bp | TGGGGGCTGAAGTCAGGCGCCAGACAGCAGGCACTCTaGATCTTATCTTCAGAGCATAGATCCTCCTTGACA | + |
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Preference number: 3 (lower is better) Translates to: WGLKSGARQQAL*ILSSEHRSSLT Trigger: TGTCAAGGAGGATCTATGCTCTGAAGATAAGATGCAGAGTGCCTGCTGTCTGGCGCCTGACTTCAGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR TCA 72 bp | CACTCTGCATCTTATCTTCAGAGCATAGATCCTCCTTaGCAGCCTTGGGTCTCAGGCTGGGCTCAGGCATAC | + |
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Preference number: 3 (lower is better) Translates to: HSASYLQSIDPP*QPWVSGWAQAY Trigger: GTATGCCTGAGCCCAGCCTGAGACCCAAGGCTGTCAAGGAGGATCTATGCTCTGAAGATAAGATGCAGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CCA 72 bp | GGCTGGGCTCAGGCATACATAACTCATGTCCTTGGATaGCTTGGGAGTTCAGGAAGAGATAGTGAAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GWAQAYITHVLG*LGSSGRDSEEG Trigger: CCCCTCTTCACTATCTCTTCCTGAACTCCCAAGCCATCCAAGGACATGAGTTATGTATGCCTGAGCCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CCA 72 bp | TTTTACAAAGAACAAAGAAGTGGGCATCTGCTGACATaGGGGCTGAAGTCAGGCGCCAGACAGCAGGCACTC | + |
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Preference number: 3 (lower is better) Translates to: FYKEQRSGHLLT*GLKSGARQQAL Trigger: GAGTGCCTGCTGTCTGGCGCCTGACTTCAGCCCCCATGTCAGCAGATGCCCACTTCTTTGTTCTTTGTAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGCCTGATCCACTGGCAAACACTTCACAGATATGCCAGAGTCCAATTCTGGCCTCACCAAGTGTCTaGCTCACGAGTCTGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: QQPDPLANTSQICQSPILASPSV*LTSLSS Trigger: TGAAGACAGACTCGTGAGCAAGACACTTGGTGAGGC...CAGAATTGGACTCTGGCATATCTGTGAAGTGTTTGCCAGTGGATCAGGCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR GCA 72 bp | TACTCCCTCCAAGCATCAGGTGTCCTCAATGGTTCTTaGCTCACCAAGTGTCTTGCTCACGAGTCTGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: YSLQASGVLNGS*LTKCLAHESVF Trigger: GAAGACAGACTCGTGAGCAAGACACTTGGTGAGGCAAGAACCATTGAGGACACCTGATGCTTGGAGGGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR TCA 72 bp | GAGCTAGCTCTACCAGCAGCCCCTCTCACAGTTCATTaGGTCCTATTTATACTCCCTCCAAGCATCAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: ELALPAAPLTVH*VLFILPPSIRC Trigger: ACACCTGATGCTTGGAGGGAGTATAAATAGGACTCAATGAACTGTGAGAGGGGCTGCTGGTAGAGCTAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR CAA 90 bp | AGGATCAGCAGGGATGTCAGAAGTTCTCAGCTGAGCCTCTCTGAACAAAGCAAATGTCCTCAATGGTTCTaGCCTCACCAAGTGTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: RISRDVRSSQLSLSEQSKCPQWF*PHQVSC Trigger: GCAAGACACTTGGTGAGGCAAGAACCATTGAGGACA...TTTGCTTTGTTCAGAGAGGCTCAGCTGAGAACTTCTGACATCCCTGCTGATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR CAA 90 bp | AGACAGCAGGCACTCTGCATCTTATCTTCAGAGCATAGATCCTCCTTGACAGCCGGAAAAGGTCATGTTTaGGACCCAGTAAAACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: RQQALCILSSEHRSSLTAGKGHV*DPVKQR Trigger: TCTCTGTTTTACTGGGTCCAAAACATGACCTTTTCC...GGCTGTCAAGGAGGATCTATGCTCTGAAGATAAGATGCAGAGTGCCTGCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTTCAGTTCAAATGTCAGCAGCAGCCTGATCCACTGGCAAACACTTCACAGACCCTCTCACAGTTCATaGAGTCCTATTTATACTCCC | + |
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Preference number: 3 (lower is better) Translates to: QFSSNVSSSLIHWQTLHRPSHSS*SPIYTP Trigger: GGGAGTATAAATAGGACTCAATGAACTGTGAGAGGG...TCTGTGAAGTGTTTGCCAGTGGATCAGGCTGCTGCTGACATTTGAACTGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR TCA 72 bp | GCAGGAGGATCAGCAGGGATGTCAGAAGTTCTCAGCTaGGCCTCTCTGAACAAAGCAAAAATCAGAGAATAC | + |
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Preference number: 3 (lower is better) Translates to: AGGSAGMSEVLS*ASLNKAKIREY Trigger: GTATTCTCTGATTTTTGCTTTGTTCAGAGAGGCTCAGCTGAGAACTTCTGACATCCCTGCTGATCCTCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR TCA 72 bp | TTCTGTAAAGTTGGGATAGCAGACATGACTCAGCAGTaGCAACATGACCTAGCAGAGACATCAAGGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: FCKVGIADMTQQ*QHDLAETSRPQ Trigger: CTGAGGCCTTGATGTCTCTGCTAGGTCATGTTGTCACTGCTGAGTCATGTCTGCTATCCCAACTTTACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR GCA 72 bp | AGGTGTCCTCAATGGTTCTTGCCTCACCAAGTGTCTTaGTCACGAGTCTGTCTTCACAAAACACCATGTTCA | + |
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Preference number: 3 (lower is better) Translates to: RCPQWFLPHQVS*SRVCLHKTPCS Trigger: TGAACATGGTGTTTTGTGAAGACAGACTCGTGAGCAAGACACTTGGTGAGGCAAGAACCATTGAGGACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR GCA 72 bp | AGCAAAAATCAGAGAATACACAAGACCAAGAAGCATTaGAGAGCTAGCTCTACCAGCAGCCCCTCTCACAGT | + |
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Preference number: 3 (lower is better) Translates to: SKNQRIHKTKKH*RASSTSSPSHS Trigger: ACTGTGAGAGGGGCTGCTGGTAGAGCTAGCTCTGCAATGCTTCTTGGTCTTGTGTATTCTCTGATTTTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CCA 72 bp | GATATCACTCTGCCAATAAGCCCAAGTCTGCAGAAGTaGCAAGAAGCTCCAAGAAATTACCAGCACACAACC | + |
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Preference number: 3 (lower is better) Translates to: DITLPISPSLQK*QEAPRNYQHTT Trigger: GGTTGTGTGCTGGTAATTTCTTGGAGCTTCTTGCCACTTCTGCAGACTTGGGCTTATTGGCAGAGTGATATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CCA 72 bp | CAGTTCAGTTCAAATGTCAGCAGCAGCCTGATCCACTaGCAAACACTTCACAGATATGCCAGAGTCCAATTC | + |
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Preference number: 3 (lower is better) Translates to: QFSSNVSSSLIH*QTLHRYARVQF Trigger: GAATTGGACTCTGGCATATCTGTGAAGTGTTTGCCAGTGGATCAGGCTGCTGCTGACATTTGAACTGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR TCA 72 bp | GAATTCAACAGTTCAGTTCAAATGTCAGCAGCAGCCTaGTCCACTGGCAAACACTTCACAGATATGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: EFNSSVQMSAAA*STGKHFTDMPE Trigger: CTCTGGCATATCTGTGAAGTGTTTGCCAGTGGATCAGGCTGCTGCTGACATTTGAACTGAACTGTTGAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR CAA 90 bp | AGCCCCTCTCACAGTTCATTGAGTCCTATTTATACTCCCTCCAAGCATCAGGTGACAACCAAAAGTTTTTaGGTGCATTTCTCTCCATGC | + |
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Preference number: 3 (lower is better) Translates to: SPSHSSLSPIYTPSKHQVTTKSF*VHFSPC Trigger: GCATGGAGAGAAATGCACCAAAAAACTTTTGGTTGT...CACCTGATGCTTGGAGGGAGTATAAATAGGACTCAATGAACTGTGAGAGGGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR CAA 90 bp | AGACAGCAGGCACTCTGCATCTTATCTTCAGAGCATAGATCCTCCTTGACAGCCTTTACAAATTGTTCTTaGGAGCAAATCCCTTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: RQQALCILSSEHRSSLTAFTNCS*EQIPSA Trigger: TGCAGAAGGGATTTGCTCCAAAGAACAATTTGTAAA...GGCTGTCAAGGAGGATCTATGCTCTGAAGATAAGATGCAGAGTGCCTGCTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR TCA 72 bp | CTGTCTTCACAAAACACCATGTTCATCTGTCTCAGCTaGTATCACTCTGCCAATAAGCCCAAGTCTGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LSSQNTMFICLS*YHSANKPKSAE Trigger: TTCTGCAGACTTGGGCTTATTGGCAGAGTGATATCAGCTGAGACAGATGAACATGGTGTTTTGTGAAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR TCA 72 bp | CAGCAGGGATGTCAGAAGTTCTCAGCTGAGCCTCTCTaGACAAAGCAAAAATCAGAGAATACACAAGACCAA | + |
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Preference number: 3 (lower is better) Translates to: QQGCQKFSAEPL*TKQKSENTQDQ Trigger: TTGGTCTTGTGTATTCTCTGATTTTTGCTTTGTTCAGAGAGGCTCAGCTGAGAACTTCTGACATCCCTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR-3UTR CAA 90 bp | GCTCAGGCATACATAACTCATGTCCTTGGATGGCTTGGGAGTTCAGGAAGAGATAAACCTGTTTACAAATaGTTCTTTGGAGCAAATCCC | + |
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Preference number: 3 (lower is better) Translates to: AQAYITHVLGWLGSSGRDKPVYK*FFGANP Trigger: GGGATTTGCTCCAAAGAACAATTTGTAAACAGGTTT...ATCTCTTCCTGAACTCCCAAGCCATCCAAGGACATGAGTTATGTATGCCTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR GCA 72 bp | ACGGTACCTATCAAGGTCTCATTTATTAGGCTGAGGTaGCTTGTTTTTAAAGCATACATCTCGGGGAATAGG | + |
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Preference number: 3 (lower is better) Translates to: TVPIKVSFIRLR*LVFKAYISGNR Trigger: CCTATTCCCCGAGATGTATGCTTTAAAAACAAGGCACCTCAGCCTAATAAATGAGACCTTGATAGGTACCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR GCA 72 bp | ATGAATGCACTGTTAAGTGTAGCCTTAATTTTTCAATaGCTCCTTTCAACAATAGTTCTTAAACGCTGTAAC | + |
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Preference number: 3 (lower is better) Translates to: MNALLSVALIFQ*LLSTIVLKRCN Trigger: GTTACAGCGTTTAAGAACTATTGTTGAAAGGAGGCATTGAAAAATTAAGGCTACACTTAACAGTGCATTCAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CAA 72 bp | ATACTCCCTCCAAGCATCAGGTGTCCTCAATGGTTCTaGCCTCACCAAGTGTCTTGCTCACGAGTCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ILPPSIRCPQWF*PHQVSCSRVCL Trigger: AAGACAGACTCGTGAGCAAGACACTTGGTGAGGCAAGAACCATTGAGGACACCTGATGCTTGGAGGGAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CAA 72 bp | AGAGCTAGCTCTACCAGCAGCCCCTCTCACAGTTCATaGAGTCCTATTTATACTCCCTCCAAGCATCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RASSTSSPSHSS*SPIYTPSKHQV Trigger: CACCTGATGCTTGGAGGGAGTATAAATAGGACTCAATGAACTGTGAGAGGGGCTGCTGGTAGAGCTAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CAA 72 bp | ATCTTATCTTCAGAGCATAGATCCTCCTTGACAGCCTaGGGTCTCAGGCTGGGCTCAGGCATACATAACTCA | + |
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Preference number: 4 (lower is better) Translates to: ILSSEHRSSLTA*GLRLGSGIHNS Trigger: TGAGTTATGTATGCCTGAGCCCAGCCTGAGACCCAAGGCTGTCAAGGAGGATCTATGCTCTGAAGATAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| CDS-3UTR TCA 90 bp | CACTGGCAAACACTTCACAGATATGCCAGAGTCCAATTCTGTAAAGTTGGGATAATACACGTGGACTCATaGTGGTCAGGTAGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HWQTLHRYARVQFCKVGIIHVDS*WSGSAG Trigger: CCCTGCACTACCTGACCATCATGAGTCCACGTGTAT...TATCCCAACTTTACAGAATTGGACTCTGGCATATCTGTGAAGTGTTTGCCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| CDS-3UTR GCA 90 bp | AGGAATTCAACAGTTCAGTTCAAATGTCAGCAGCAGCCTGATCCACTGGCAAACGGATGTTTCCAGCCATaGTTAATATGTAGAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: RNSTVQFKCQQQPDPLANGCFQP*LICRAP Trigger: CGGTGCTCTACATATTAAGCATGGCTGGAAACATCC...GTTTGCCAGTGGATCAGGCTGCTGCTGACATTTGAACTGAACTGTTGAATTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| CDS-3UTR CCA 90 bp | TACCAGCAGCCCCTCTCACAGTTCATTGAGTCCTATTTATACTCCCTCCAAGCAATCTGGGAGTTAGGATaGGGCCACGTATATATAAAC | + |
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Preference number: 4 (lower is better) Translates to: YQQPLSQFIESYLYSLQAIWELG*GHVYIN Trigger: GTTTATATATACGTGGCCCCATCCTAACTCCCAGAT...TGCTTGGAGGGAGTATAAATAGGACTCAATGAACTGTGAGAGGGGCTGCTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| CDS-3UTR CCA 90 bp | AATCAGAGAATACACAAGACCAAGAAGCATTGCAGAGCTAGCTCTACCAGCAGCAGAAATTTGTCTATCTaGGAGTTAGGATGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: NQRIHKTKKHCRASSTSSRNLSI*ELGWGH Trigger: GTGGCCCCATCCTAACTCCCAGATAGACAAATTTCT...GCTGCTGGTAGAGCTAGCTCTGCAATGCTTCTTGGTCTTGTGTATTCTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| CDS-3UTR CCA 90 bp | AAGAAACCATCAAGCATCCTTTCATGTGCAAAACAGCCTTTCATCTGTGTCCACATCTGTCAAATGCCATaGCCACAAGTAGCACCATCT | + |
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Preference number: 4 (lower is better) Translates to: KKPSSILSCAKQPFICVHICQMP*PQVAPS Trigger: AGATGGTGCTACTTGTGGCCATGGCATTTGACAGAT...GTGGACACAGATGAAAGGCTGTTTTGCACATGAAAGGATGCTTGATGGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| CDS-3UTR TCA 90 bp | CACTGGCAAACACTTCACAGATATGCCAGAGTCCAATTCTGTAAAGTTGGGATAAGGCTACCAAATCAATaGAGGAGAGACATGCTAGTA | + |
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Preference number: 4 (lower is better) Translates to: HWQTLHRYARVQFCKVGIRLPNQ*RRDMLV Trigger: TACTAGCATGTCTCTCCTTCATTGATTTGGTAGCCT...TATCCCAACTTTACAGAATTGGACTCTGGCATATCTGTGAAGTGTTTGCCAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| CDS-3UTR CCA 90 bp | CACTGGCAAACACTTCACAGATATGCCAGAGTCCAATTCTGTAAAGTTGGGATACAAAACACATACACGTaGACTCATGATGGTCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: HWQTLHRYARVQFCKVGIQNTYT*THDGQV Trigger: TACCTGACCATCATGAGTCCACGTGTATGTGTTTTG...TATCCCAACTTTACAGAATTGGACTCTGGCATATCTGTGAAGTGTTTGCCAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CAA 72 bp | GCTCCAAGAAATTACCAGCACACAACCAAAAGTTTTTaGGTGCATTTCTCTCCATGCAGTCATAACAAATGG | + |
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Preference number: 4 (lower is better) Translates to: APRNYQHTTKSF*VHFSPCSHNKW Trigger: CCATTTGTTATGACTGCATGGAGAGAAATGCACCAAAAAACTTTTGGTTGTGTGCTGGTAATTTCTTGGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| 3UTR CAA 72 bp | ACAAAAGATACAGGGATAAGTAAACCTGTTTACAAATaGTTCTTTGGAGCAAATCCCTTCTGCATTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: TKDTGISKPVYK*FFGANPFCIFR Trigger: CCTGAAAATGCAGAAGGGATTTGCTCCAAAGAACAATTTGTAAACAGGTTTACTTATCCCTGTATCTTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216114.3 |
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| CDS CCA 90 bp | AAAGGAGTAAGAACCGCATCAAAAAGAGCAAGAAATTTGTCTATCTaGGAGTTAGGATGGGGCCACGTATATATAAACAGAGTAGGACCA | + |
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Preference number: 5 (lower is better) Translates to: KGVRTASKRARNLSI*ELGWGHVYINRVGP Trigger: TGGTCCTACTCTGTTTATATATACGTGGCCCCATCCTAACTCCCAGATAGACAAATTTCTTGCTCTTTTTGATGCGGTTCTTACTCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099609.2 ENSMUST00000216114.3 |
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| CDS CCA 72 bp | GGTAAGTCAATAAGAAAAGCCAGCTGGAACAATGAGTaGCTAATGCCCAGGCCCCAAGCAGCACCCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: GKSIRKASWNNE*LMPRPQAAPRN Trigger: GTTTCTGGGTGCTGCTTGGGGCCTGGGCATTAGCCACTCATTGTTCCAGCTGGCTTTTCTTATTGACTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099609.2 ENSMUST00000216114.3 |
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| CDS CAA 72 bp | AAAGGAGTAAGAACCGCATCAAAAAGAGCAAGAAATTaGTCTATCTGGGAGTTAGGATGGGGCCACGTATAT | + |
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Preference number: 6 (lower is better) Translates to: KGVRTASKRARN*SIWELGWGHVY Trigger: ATATACGTGGCCCCATCCTAACTCCCAGATAGACAAATTTCTTGCTCTTTTTGATGCGGTTCTTACTCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099609.2 ENSMUST00000216114.3 |
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| CDS CCA 72 bp | AGAACCGCATCAAAAAGAGCAAGAAATTTGTCTATCTaGGAGTTAGGATGGGGCCACGTATATATAAACAGA | + |
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Preference number: 6 (lower is better) Translates to: RTASKRARNLSI*ELGWGHVYINR Trigger: TCTGTTTATATATACGTGGCCCCATCCTAACTCCCAGATAGACAAATTTCTTGCTCTTTTTGATGCGGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099609.2 ENSMUST00000216114.3 |
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