Pregenerated sensors for OLFR1302 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044560Ensembl transcript IDs: ENSMUST00000054004.2, ENSMUST00000214708.2, ENSMUST00000215244.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGATGTATTTCTTCCCTTGCATAGGACCTTCCAATACTATGATGTaGATCAGCTCAGAAGTATCTCTGTCAATACGAAACTGGTTTTTC | + |
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Preference number: 1 (lower is better) Translates to: LMYFFPCIGPSNTMM*ISSEVSLSIRNWFF Trigger: GAAAAACCAGTTTCGTATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTATTGGAAGGTCCTATGCAAGGGAAGAAATACATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR GCA 90 bp | CTACTTTATAGGAGCAAAGCCATTATTGTACTAGTGGAAACATATTaGTTGGTAGGTCATTCATTGCATGAAGGATCCAGAGGTAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: LLYRSKAIIVLVETY*LVGHSLHEGSRGRN Trigger: ATTTCTACCTCTGGATCCTTCATGCAATGAATGACCTACCAAGCAATATGTTTCCACTAGTACAATAATGGCTTTGCTCCTATAAAGTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR CCA 90 bp | AATAACACAGATCCATTGCTACAATCACAAGCATTTCAAGGGAATTaGACAACAGGACAATTTTGCAAACAAGTAATAGATTCCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: NNTDPLLQSQAFQGN*TTGQFCKQVIDSSG Trigger: CCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCTGTTGTCCAATTCCCTTGAAATGCTTGTGATTGTAGCAATGGATCTGTGTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR CAA 90 bp | TCAGCTCAGAAGTATCTCTGTCAATACGAAACTGGTTTTTCTGTTTaGGTGACAAAGTATGTTGCAGGAGGGCAATGCCATCTAGTCATG | + |
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Preference number: 2 (lower is better) Translates to: SAQKYLCQYETGFSV*VTKYVAGGQCHLVM Trigger: CATGACTAGATGGCATTGCCCTCCTGCAACATACTTTGTCACCAAAACAGAAAAACCAGTTTCGTATTGACAGAGATACTTCTGAGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR GCA 90 bp | CATAGGACCTTCCAATACTATGATGTGAATCAGCTCAGAAGTATCTCTGTCAATGGTGACAAAGTATGTTaGAGGAGGGCAATGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: HRTFQYYDVNQLRSISVNGDKVC*RRAMPS Trigger: AGATGGCATTGCCCTCCTGCAACATACTTTGTCACC...ATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTATTGGAAGGTCCTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR CAA 90 bp | TGCATGAAGGATCCAGAGGTAGAAATCACTGATGTATTTCTTCCCTaGCATAGGACCTTCCAATACTATGATGTGAATCAGCTCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: CMKDPEVEITDVFLP*HRTFQYYDVNQLRS Trigger: ACTTCTGAGCTGATTCACATCATAGTATTGGAAGGTCCTATGCAAGGGAAGAAATACATCAGTGATTTCTACCTCTGGATCCTTCATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR CCA 90 bp | GAAACTGGTTTTTCTGTTTTGGTGACAAAGTATGTTGCAGGAGGGCAATGCCATCCTCTGAGGCTTTTCTaGCCTATAAAATATAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ETGFSVLVTKYVAGGQCHPLRLF*PIKYRK Trigger: CTTCCTATATTTTATAGGCCAGAAAAGCCTCAGAGG...ATGGCATTGCCCTCCTGCAACATACTTTGTCACCAAAACAGAAAAACCAGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR CAA 90 bp | CTTTATAGGAGCAAAGCCATTATTGTACTAGTGGAAACATATTGCTaGGTAGGTCATTCATTGCATGAAGGATCCAGAGGTAGAAATCAC | + |
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Preference number: 2 (lower is better) Translates to: LYRSKAIIVLVETYC*VGHSLHEGSRGRNH Trigger: GTGATTTCTACCTCTGGATCCTTCATGCAATGAATGACCTACCAAGCAATATGTTTCCACTAGTACAATAATGGCTTTGCTCCTATAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGGACCTTCCAATACTATGATGTGAATCAGCTCAGAAGTATCTCTGTCAATATAAACATTCTGGTTTaGAACGTATTCTGCGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: HRTFQYYDVNQLRSISVNINILV*NVFCEV Trigger: GACCTCGCAGAATACGTTTCAAACCAGAATGTTTAT...ATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTATTGGAAGGTCCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGGACCTTCCAATACTATGATGTGAATCAGCTCAGAAGTATCTCTGTCAATGTTTTTCTGTTTTGGTaGCAAAGTATGTTGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: HRTFQYYDVNQLRSISVNVFLFW*QSMLQE Trigger: CTCCTGCAACATACTTTGTCACCAAAACAGAAAAAC...ATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTATTGGAAGGTCCTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR TCA 90 bp | TGTACACTTTTATCTTTACCTAGAGGGGTACATTTCTTATTCCAGAGTCATGCTGACCTTCCAATACTATaGTGTGAATCAGCTCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: CTLLSLPRGVHFLFQSHADLPIL*CESAQK Trigger: CTTCTGAGCTGATTCACATCATAGTATTGGAAGGTC...AGCATGACTCTGGAATAAGAAATGTACCCCTCTAGGTAAAGATAAAAGTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR CAA 90 bp | GCTACAATCACAAGCATTTCAAGGGAATTGGACAACAGGACAATTTaGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: ATITSISRELDNRTI*QTSNRFLREFVSDS Trigger: AGAGTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCTGTTGTCCAATTCCCTTGAAATGCTTGTGATTGTAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAGAAGTATCTCTGTCAATACGAAACTGGTTTTTCTGTTTTGGTGACAAACCTCTGAGGCTTTTCTaGCCTATAAAATATAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SSEVSLSIRNWFFCFGDKPLRLF*PIKYRK Trigger: CTTCCTATATTTTATAGGCCAGAAAAGCCTCAGAGG...TTTGTCACCAAAACAGAAAAACCAGTTTCGTATTGACAGAGATACTTCTGAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACTCTCACATAAACATTCTGGTTTaGAACGTATTCTGCGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: TILQTSNRFLREFVSDSHINILV*NVFCEV Trigger: GACCTCGCAGAATACGTTTCAAACCAGAATGTTTAT...GTGAGAGTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACTCTGTTTTTCTGTTTTGGTaGCAAAGTATGTTGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RTILQTSNRFLREFVSDSVFLFW*QSMLQE Trigger: CTCCTGCAACATACTTTGTCACCAAAACAGAAAAAC...AGAGTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCACAGCTATGGGTTTTGATTAGGTTTATTGGTCTGGCCATAAATTATTTTGACCTATATCTGAAATaGGAGGTGGCAGAAATATTG | + |
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Preference number: 2 (lower is better) Translates to: LSQLWVLIRFIGLAINYFDLYLK*EVAEIL Trigger: CAATATTTCTGCCACCTCCCATTTCAGATATAGGTC...AAAATAATTTATGGCCAGACCAATAAACCTAATCAAAACCCATAGCTGTGAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGGACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACCTAGTGGAAACATATTaGTTGGTAGGTCATTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: NRTILQTSNRFLREFVSDLVETY*LVGHSL Trigger: CAATGAATGACCTACCAAGCAATATGTTTCCACTAG...GTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACTCTCTGTCAATACGAAACTaGTTTTTCTGTTTTGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: RTILQTSNRFLREFVSDSLSIRN*FFCFGD Trigger: GTCACCAAAACAGAAAAACCAGTTTCGTATTGACAG...AGAGTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR GCA 72 bp | CGAAACTGGTTTTTCTGTTTTGGTGACAAAGTATGTTaGAGGAGGGCAATGCCATCTAGTCATGGTGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: RNWFFCFGDKVC*RRAMPSSHGEK Trigger: TTTCTCACCATGACTAGATGGCATTGCCCTCCTGCAACATACTTTGTCACCAAAACAGAAAAACCAGTTTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR TCA 72 bp | TTCTTCCCTTGCATAGGACCTTCCAATACTATGATGTaGATCAGCTCAGAAGTATCTCTGTCAATACGAAAC | + |
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Preference number: 3 (lower is better) Translates to: FFPCIGPSNTMM*ISSEVSLSIRN Trigger: GTTTCGTATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTATTGGAAGGTCCTATGCAAGGGAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR CAA 90 bp | AGGACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACTCTTTGGTAGGTCATTCATaGCATGAAGGATCCAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: RTILQTSNRFLREFVSDSLVGHS*HEGSRG Trigger: ACCTCTGGATCCTTCATGCAATGAATGACCTACCAA...AGAGTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR CAA 90 bp | CATAGGACCTTCCAATACTATGATGTGAATCAGCTCAGAAGTATCTCTGTCAATACTGGTTTTTCTGTTTaGGTGACAAAGTATGTTGCA | + |
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Preference number: 3 (lower is better) Translates to: HRTFQYYDVNQLRSISVNTGFSV*VTKYVA Trigger: TGCAACATACTTTGTCACCAAAACAGAAAAACCAGT...ATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTATTGGAAGGTCCTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR CAA 90 bp | AACAGGACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACAATAAACATTCTGGTTaGAAACGTATTCTGCGAGGT | + |
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Preference number: 3 (lower is better) Translates to: NRTILQTSNRFLREFVSDNKHSG*KRILRG Trigger: ACCTCGCAGAATACGTTTCAAACCAGAATGTTTATT...GTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR CAA 90 bp | TACTATGATGTGAATCAGCTCAGAAGTATCTCTGTCAATACGAAACTGGTTTTTAATAAACATTCTGGTTaGAAACGTATTCTGCGAGGT | + |
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Preference number: 3 (lower is better) Translates to: YYDVNQLRSISVNTKLVFNKHSG*KRILRG Trigger: ACCTCGCAGAATACGTTTCAAACCAGAATGTTTATT...AAAAACCAGTTTCGTATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR-3UTR CAA 90 bp | AGGACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACTCTACTAGTGGAAACATATaGCTTGGTAGGTCATTCATT | + |
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Preference number: 3 (lower is better) Translates to: RTILQTSNRFLREFVSDSTSGNI*LGRSFI Trigger: AATGAATGACCTACCAAGCAATATGTTTCCACTAGT...AGAGTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR GCA 72 bp | CAAGCATTTCAAGGGAATTGGACAACAGGACAATTTTaGAAACAAGTAATAGATTCCTCAGGGAATTTGTAT | + |
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Preference number: 3 (lower is better) Translates to: QAFQGNWTTGQF*KQVIDSSGNLY Trigger: ATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCTGTTGTCCAATTCCCTTGAAATGCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR CCA 72 bp | GATCCATTGCTACAATCACAAGCATTTCAAGGGAATTaGACAACAGGACAATTTTGCAAACAAGTAATAGAT | + |
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Preference number: 3 (lower is better) Translates to: DPLLQSQAFQGN*TTGQFCKQVID Trigger: ATCTATTACTTGTTTGCAAAATTGTCCTGTTGTCCAATTCCCTTGAAATGCTTGTGATTGTAGCAATGGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR GCA 90 bp | GTATCTCTGTCAATACGAAACTGGTTTTTCTGTTTTGGTGACAAAGTATGTTGCGGACAGGGCCTTAGATaGCCCAGCCTTAGAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VSLSIRNWFFCFGDKVCCGQGLR*PSLRAP Trigger: AGGAGCTCTAAGGCTGGGGCATCTAAGGCCCTGTCC...GCAACATACTTTGTCACCAAAACAGAAAAACCAGTTTCGTATTGACAGAGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | TTATGTTCTTTGAAGACATTAGACCTATATCTGAAATGGGAGGTGGCAGAAATACCTGCAGCAATGCAATaGGCAAAGAAGACCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LCSLKTLDLYLKWEVAEIPAAMQ*AKKTWD Trigger: GTCCCAGGTCTTCTTTGCTCATTGCATTGCTGCAGG...TATTTCTGCCACCTCCCATTTCAGATATAGGTCTAATGTCTTCAAAGAACATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | CTCTCACAGCTATGGGTTTTGATTAGGTTTATTGGTCTGGCCATAAATTATTTTCCTGCAGCAATGCAATaGGCAAAGAAGACCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSQLWVLIRFIGLAINYFPAAMQ*AKKTWD Trigger: GTCCCAGGTCTTCTTTGCTCATTGCATTGCTGCAGG...AAAATAATTTATGGCCAGACCAATAAACCTAATCAAAACCCATAGCTGTGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | AGCTCAGAAGTATCTCTGTCAATACGAAACTGGTTTTTCTGTTTTGGTGACAAAACAATCACTACCAGGTaGCTCAAGGCATGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: SSEVSLSIRNWFFCFGDKTITTR*LKACTK Trigger: CTTTGTGCATGCCTTGAGTCACCTGGTAGTGATTGT...TTTGTCACCAAAACAGAAAAACCAGTTTCGTATTGACAGAGATACTTCTGAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | AGGACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACTCTCCATACAGGCTAGCTTaGTTACCAGAGGCATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: RTILQTSNRFLREFVSDSPYRLA*LPEACH Trigger: GTGACATGCCTCTGGTAATCAAGCTAGCCTGTATGG...AGAGTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | CTCTCACAGCTATGGGTTTTGATTAGGTTTATTGGTCTGGCCATAAATTATTTTCCATACAGGCTAGCTTaGTTACCAGAGGCATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LSQLWVLIRFIGLAINYFPYRLA*LPEACH Trigger: GTGACATGCCTCTGGTAATCAAGCTAGCCTGTATGG...AAAATAATTTATGGCCAGACCAATAAACCTAATCAAAACCCATAGCTGTGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR CCA 90 bp | GTATCTCTGTCAATACGAAACTGGTTTTTCTGTTTTGGTGACAAAGTATGTTGCCATGCACAAAGCCAATaGTCCAGGAAGTCAACACCA | + |
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Preference number: 4 (lower is better) Translates to: VSLSIRNWFFCFGDKVCCHAQSQ*SRKSTP Trigger: TGGTGTTGACTTCCTGGACCATTGGCTTTGTGCATG...GCAACATACTTTGTCACCAAAACAGAAAAACCAGTTTCGTATTGACAGAGATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | AGGACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACTCTAAGTACATAGGGGAATaGAGATGGGGGTCAGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: RTILQTSNRFLREFVSDSKYIGE*RWGSVV Trigger: AACCACTGACCCCCATCTTCATTCCCCTATGTACTT...AGAGTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | CATAGGACCTTCCAATACTATGATGTGAATCAGCTCAGAAGTATCTCTGTCAATCTTAGGAGTAGTTACTaGGGAAAGCCACATATCAAC | + |
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Preference number: 4 (lower is better) Translates to: HRTFQYYDVNQLRSISVNLRSSY*GKPHIN Trigger: GTTGATATGTGGCTTTCCTCAGTAACTACTCCTAAG...ATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTATTGGAAGGTCCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | TACTATGATGTGAATCAGCTCAGAAGTATCTCTGTCAATACGAAACTGGTTTTTACAATCACTACCAGGTaGCTCAAGGCATGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: YYDVNQLRSISVNTKLVFTITTR*LKACTK Trigger: CTTTGTGCATGCCTTGAGTCACCTGGTAGTGATTGT...AAAAACCAGTTTCGTATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR GCA 90 bp | TTATGTTCTTTGAAGACATTAGACCTATATCTGAAATGGGAGGTGGCAGAAATAAGAAGACCTGGGACATaGAGCCTGAAAAGGAAATGG | + |
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Preference number: 4 (lower is better) Translates to: LCSLKTLDLYLKWEVAEIRRPGT*SLKRKW Trigger: CCATTTCCTTTTCAGGCTGCATGTCCCAGGTCTTCT...TATTTCTGCCACCTCCCATTTCAGATATAGGTCTAATGTCTTCAAAGAACATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR GCA 90 bp | AACAGGACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACAGAAGACCTGGGACATaGAGCCTGAAAAGGAAATGG | + |
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Preference number: 4 (lower is better) Translates to: NRTILQTSNRFLREFVSDRRPGT*SLKRKW Trigger: CCATTTCCTTTTCAGGCTGCATGTCCCAGGTCTTCT...GTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR GCA 90 bp | ACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACTCTCACCAGCACCATCTCTCCTaGAGCAATGCAATGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: TILQTSNRFLREFVSDSHQHHLS*SNAMSK Trigger: TTTGCTCATTGCATTGCTGCAGGAGAGATGGTGCTG...GTGAGAGTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR CCA 90 bp | TTATGTTCTTTGAAGACATTAGACCTATATCTGAAATGGGAGGTGGCAGAAATACATGCACAAAGCCAATaGTCCAGGAAGTCAACACCA | + |
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Preference number: 4 (lower is better) Translates to: LCSLKTLDLYLKWEVAEIHAQSQ*SRKSTP Trigger: TGGTGTTGACTTCCTGGACCATTGGCTTTGTGCATG...TATTTCTGCCACCTCCCATTTCAGATATAGGTCTAATGTCTTCAAAGAACATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR CAA 72 bp | AAGTATCTCTGTCAATACGAAACTGGTTTTTCTGTTTaGGTGACAAAGTATGTTGCAGGAGGGCAATGCCAT | + |
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Preference number: 4 (lower is better) Translates to: KYLCQYETGFSV*VTKYVAGGQCH Trigger: ATGGCATTGCCCTCCTGCAACATACTTTGTCACCAAAACAGAAAAACCAGTTTCGTATTGACAGAGATACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| 3UTR CAA 72 bp | AGCAAAGCCATTATTGTACTAGTGGAAACATATTGCTaGGTAGGTCATTCATTGCATGAAGGATCCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SKAIIVLVETYC*VGHSLHEGSRG Trigger: ACCTCTGGATCCTTCATGCAATGAATGACCTACCAAGCAATATGTTTCCACTAGTACAATAATGGCTTTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | TACTATGATGTGAATCAGCTCAGAAGTATCTCTGTCAATACGAAACTGGTTTTTTGCTTGAATATTCTGTaGGTGGGCAAGTCCCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: YYDVNQLRSISVNTKLVFCLNIL*VGKSQK Trigger: CTTTTGGGACTTGCCCACTCACAGAATATTCAAGCA...AAAAACCAGTTTCGTATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | TTATGTTCTTTGAAGACATTAGACCTATATCTGAAATGGGAGGTGGCAGAAATATGCTTGAATATTCTGTaGGTGGGCAAGTCCCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: LCSLKTLDLYLKWEVAEICLNIL*VGKSQK Trigger: CTTTTGGGACTTGCCCACTCACAGAATATTCAAGCA...TATTTCTGCCACCTCCCATTTCAGATATAGGTCTAATGTCTTCAAAGAACATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | TTATGTTCTTTGAAGACATTAGACCTATATCTGAAATGGGAGGTGGCAGAAATACAAAAGCACAAATTCTaGTACCAGGGAGTGATTACC | + |
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Preference number: 4 (lower is better) Translates to: LCSLKTLDLYLKWEVAEIQKHKF*YQGVIT Trigger: GGTAATCACTCCCTGGTATCAGAATTTGTGCTTTTG...TATTTCTGCCACCTCCCATTTCAGATATAGGTCTAATGTCTTCAAAGAACATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | ACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACTCTCACCAAAAGCACAAATTCTaGTACCAGGGAGTGATTACC | + |
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Preference number: 4 (lower is better) Translates to: TILQTSNRFLREFVSDSHQKHKF*YQGVIT Trigger: GGTAATCACTCCCTGGTATCAGAATTTGTGCTTTTG...GTGAGAGTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR TCA 90 bp | CTCTCACAGCTATGGGTTTTGATTAGGTTTATTGGTCTGGCCATAAATTATTTTCTTAGGAGTAGTTACTaGGGAAAGCCACATATCAAC | + |
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Preference number: 4 (lower is better) Translates to: LSQLWVLIRFIGLAINYFLRSSY*GKPHIN Trigger: GTTGATATGTGGCTTTCCTCAGTAACTACTCCTAAG...AAAATAATTTATGGCCAGACCAATAAACCTAATCAAAACCCATAGCTGTGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR GCA 90 bp | AACAGGACAATTTTGCAAACAAGTAATAGATTCCTCAGGGAATTTGTATCTGACCACATAACGGTCATATaGCATTACTACCAACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: NRTILQTSNRFLREFVSDHITVI*HYYQQH Trigger: GTGCTGTTGGTAGTAATGGCATATGACCGTTATGTG...GTCAGATACAAATTCCCTGAGGAATCTATTACTTGTTTGCAAAATTGTCCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR CCA 90 bp | CATAGGACCTTCCAATACTATGATGTGAATCAGCTCAGAAGTATCTCTGTCAATTTCTCAGTGTATAAATaGCTGGATTTAAGAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: HRTFQYYDVNQLRSISVNFSVYK*LDLREV Trigger: CACCTCTCTTAAATCCAGCCATTTATACACTGAGAA...ATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTATTGGAAGGTCCTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS-3UTR CCA 90 bp | TACTATGATGTGAATCAGCTCAGAAGTATCTCTGTCAATACGAAACTGGTTTTTTTCTCAGTGTATAAATaGCTGGATTTAAGAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: YYDVNQLRSISVNTKLVFFSVYK*LDLREV Trigger: CACCTCTCTTAAATCCAGCCATTTATACACTGAGAA...AAAAACCAGTTTCGTATTGACAGAGATACTTCTGAGCTGATTCACATCATAGTA 36% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS CCA 90 bp | GTTCCACAATCACTACCAGGTGACTCAAGGCATGCACAAAGCCAATaGTCCAGGAAGTCAACACCAACCCAGTGCATCTTTTCAGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: VPQSLPGDSRHAQSQ*SRKSTPTQCIFSGS Trigger: TGAACCTGAAAAGATGCACTGGGTTGGTGTTGACTTCCTGGACCATTGGCTTTGTGCATGCCTTGAGTCACCTGGTAGTGATTGTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054004.2 ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS TCA 90 bp | ACTCCTACAACTCCACAGTCAGCATACATTAAAATATCCAAATTATaGGAATCCATACAGGCTAGCTTGATTACCAGAGGCATGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: TPTTPQSAYIKISKL*ESIQASLITRGMSQ Trigger: CTGTGACATGCCTCTGGTAATCAAGCTAGCCTGTATGGATTCTCATAATTTGGATATTTTAATGTATGCTGACTGTGGAGTTGTAGGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054004.2 ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS CCA 72 bp | TCACTACCAGGTGACTCAAGGCATGCACAAAGCCAATaGTCCAGGAAGTCAACACCAACCCAGTGCATCTTT | + |
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Preference number: 6 (lower is better) Translates to: SLPGDSRHAQSQ*SRKSTPTQCIF Trigger: AAAGATGCACTGGGTTGGTGTTGACTTCCTGGACCATTGGCTTTGTGCATGCCTTGAGTCACCTGGTAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054004.2 ENSMUST00000214708.2 ENSMUST00000215244.2 |
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| CDS TCA 72 bp | ACTCCACAGTCAGCATACATTAAAATATCCAAATTATaGGAATCCATACAGGCTAGCTTGATTACCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: TPQSAYIKISKL*ESIQASLITRG Trigger: GCCTCTGGTAATCAAGCTAGCCTGTATGGATTCTCATAATTTGGATATTTTAATGTATGCTGACTGTGGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054004.2 ENSMUST00000214708.2 ENSMUST00000215244.2 |
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