Pregenerated sensors for OLFR1301 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057149Ensembl transcript IDs: ENSMUST00000080094.2, ENSMUST00000207590.4
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGTAAAGATAGTTCAGAGCTTGTGGGAATGTTCAACTAGTGACTaGTCTAACTTGAGGCCCAAGGTAATAGAGGGAGAGCATGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: GVKIVQSLWECSTSD*SNLRPKVIEGEHAD Trigger: GTCTGCATGCTCTCCCTCTATTACCTTGGGCCTCAAGTTAGACCAGTCACTAGTTGAACATTCCCACAAGCTCTGAACTATCTTTACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR CCA 90 bp | AATGGATCTGTGCTGTGTCTAAACACATGCTGTGGCTGTTTAGCTTaGGGTTTTTGTGAGACTCCTTACAGTGGGAGTGGGGATGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: NGSVLCLNTCCGCLA*GFCETPYSGSGDVF Trigger: AAAGACATCCCCACTCCCACTGTAAGGAGTCTCACAAAAACCCCAAGCTAAACAGCCACAGCATGTGTTTAGACACAGCACAGATCCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR GCA 90 bp | CAGCAATCATGGAGTCTGAATGGATCTGTGCTGTGTCTAAACACATaGTGTGGCTGTTTAGCTTGGGGTTTTTGTGAGACTCCTTACAGT | + |
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Preference number: 1 (lower is better) Translates to: QQSWSLNGSVLCLNT*CGCLAWGFCETPYS Trigger: ACTGTAAGGAGTCTCACAAAAACCCCAAGCTAAACAGCCACAGCATGTGTTTAGACACAGCACAGATCCATTCAGACTCCATGATTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR TCA 90 bp | AGTAATAAGGATGGCTCTAGGAATGATAAATGGGTCTCCCTGGAATaGAGAAATAGAATAGCAACTGTGGATGGACTGGGAGTGGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: SNKDGSRNDKWVSLE*RNRIATVDGLGVVW Trigger: CCAAACCACTCCCAGTCCATCCACAGTTGCTATTCTATTTCTTCATTCCAGGGAGACCCATTTATCATTCCTAGAGCCATCCTTATTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR TCA 90 bp | CCAGGGATTAGAAGCAACCTAGAAATTCCTCAACCAAAGAATGAATaGAGAACATGTGGCATATTTACACAATGGAGCATTACTCAGACA | + |
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Preference number: 1 (lower is better) Translates to: PGIRSNLEIPQPKNE*RTCGIFTQWSITQT Trigger: TGTCTGAGTAATGCTCCATTGTGTAAATATGCCACATGTTCTTCATTCATTCTTTGGTTGAGGAATTTCTAGGTTGCTTCTAATCCCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR CCA 90 bp | CCCACTATGGAAATCAACATGGGGGTTTCTCAGAAAATTAGGAATTaGTCAACCTCAAGACATAGTTATATAACTCTTGGAAATACACCC | + |
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Preference number: 1 (lower is better) Translates to: PTMEINMGVSQKIRN*STSRHSYITLGNTP Trigger: GGGTGTATTTCCAAGAGTTATATAACTATGTCTTGAGGTTGACCAATTCCTAATTTTCTGAGAAACCCCCATGTTGATTTCCATAGTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR TCA 90 bp | TGGAAATTTGCTGGCAAATGGATGGAATTAGAAAAATTATTATCATaGGTAAGGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTG | + |
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Preference number: 1 (lower is better) Translates to: WKFAGKWMELEKLLS*VRQLRLSKVSQTNV Trigger: CACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCCTTACTCATGATAATAATTTTTCTAATTCCATCCATTTGCCAGCAAATTTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR CAA 90 bp | ATAGTTCAGAGCTTGTGGGAATGTTCAACTAGTGACTGGTCTAACTaGAGGCCCAAGGTAATAGAGGGAGAGCATGCAGACACTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: IVQSLWECSTSDWSN*RPKVIEGEHADTAW Trigger: CCAGGCAGTGTCTGCATGCTCTCCCTCTATTACCTTGGGCCTCAAGTTAGACCAGTCACTAGTTGAACATTCCCACAAGCTCTGAACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGACTCAGAGGATCACAGAGACTGAAGCAGCAATCATGGAGTCTGAATGGGAAGGAAGGGGAGACTaGAGTCAGGATTTATTGTTG | + |
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Preference number: 2 (lower is better) Translates to: SRTQRITETEAAIMESEWEGRGD*SQDLLL Trigger: CAACAATAAATCCTGACTTCAGTCTCCCCTTCCTTC...CCATTCAGACTCCATGATTGCTGCTTCAGTCTCTGTGATCCTCTGAGTCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGACTCAGAGGATCACAGAGACTGAAGCAGCAATCATGGAGTCTGAATGGAGTAATAAATGCACTTaGTTGAAACCCCTGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SRTQRITETEAAIMESEWSNKCT*LKPLGD Trigger: GTCTCCCAGGGGTTTCAATCAAGTGCATTTATTACT...CCATTCAGACTCCATGATTGCTGCTTCAGTCTCTGTGATCCTCTGAGTCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | AGGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTGATGCATACTCACTTAGAGGATCACAGAGACTaGAGCAGCAATCATGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: RQLRLSKVSQTNVMHTHLEDHRD*SSNHGV Trigger: GACTCCATGATTGCTGCTTCAGTCTCTGTGATCCTC...TAAGTGAGTATGCATCACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGACTCAGAGGATCACAGAGACTGAAGCAGCAATCATGGAGTCTGAATGGTCTAAACACATGCTGTaGCTGTTTAGCTTGGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: SRTQRITETEAAIMESEWSKHML*LFSLGF Trigger: AAACCCCAAGCTAAACAGCCACAGCATGTGTTTAGA...CCATTCAGACTCCATGATTGCTGCTTCAGTCTCTGTGATCCTCTGAGTCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | AGGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTGATGCATACTCACTTATTTTCTGAGGGTAGGTaGAGAGGCAATGGATTTGGG | + |
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Preference number: 2 (lower is better) Translates to: RQLRLSKVSQTNVMHTHLFSEGR*RGNGFG Trigger: CCCAAATCCATTGCCTCTTCACCTACCCTCAGAAAA...TAAGTGAGTATGCATCACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGACTCAGAGGATCACAGAGACTGAAGCAGCAATCATGGAGTCTGAATGGGTTGATATCACTGGGTaGCTTTTCCTGTTCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: SRTQRITETEAAIMESEWVDITG*LFLFFS Trigger: AGAAAAGAACAGGAAAAGCCACCCAGTGATATCAAC...CCATTCAGACTCCATGATTGCTGCTTCAGTCTCTGTGATCCTCTGAGTCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | ATACTAGTAACAGTTCTTGCTGTTGAGGACATGAAGCAAGACAAACACTTCTTCCAACTGTGGATGGACTaGGAGTGGTTTGGCACGGGA | + |
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Preference number: 2 (lower is better) Translates to: ILVTVLAVEDMKQDKHFFQLWMD*EWFGTG Trigger: TCCCGTGCCAAACCACTCCCAGTCCATCCACAGTTG...GAAGAAGTGTTTGTCTTGCTTCATGTCCTCAACAGCAAGAACTGTTACTAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | AGGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTGATGCATACTCACTTAGGAGGGAGGGGAAACTaGGGTCAGGATATAATATAT | + |
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Preference number: 2 (lower is better) Translates to: RQLRLSKVSQTNVMHTHLGGRGN*GQDIIY Trigger: ATATATTATATCCTGACCTCAGTTTCCCCTCCCTCC...TAAGTGAGTATGCATCACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAAATCAACATGGGGGTTAGGGGAGGTAGATATTaGACTGGGAAGATGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LLVRIQTCIPTMEINMGVRGGRY*TGKMGG Trigger: TCCTCCCATCTTCCCAGTTCAATATCTACCTCCCCT...AACCCCCATGTTGATTTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | AGGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTGATGCATACTCACTTATGCCTTGTCCAGACCTaGTATGAGGATTTGTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: RQLRLSKVSQTNVMHTHLCLVQT*YEDLCL Trigger: TAAGCACAAATCCTCATATCAGGTCTGGACAAGGCA...TAAGTGAGTATGCATCACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | AGGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTGATGCATACTCACTTACTATATTGCCTTGTGTaGAGCTTTTCCTCCTACTGG | + |
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Preference number: 2 (lower is better) Translates to: RQLRLSKVSQTNVMHTHLLYCLV*SFSSYW Trigger: CCAGTAGGAGGAAAAGCTTCACACAAGGCAATATAG...TAAGTGAGTATGCATCACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR CAA 90 bp | AAGCCAGTCATCTTCTGTAACCAGGCTAGACTCTCAGTGATGGGATaGAAAGACCAACACAACCACAAATCCTTCAACCTACAACATGTT | + |
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Preference number: 2 (lower is better) Translates to: KPVIFCNQARLSVMG*KDQHNHKSFNLQHV Trigger: AACATGTTGTAGGTTGAAGGATTTGTGGTTGTGTTGGTCTTTCAATCCCATCACTGAGAGTCTAGCCTGGTTACAGAAGATGACTGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR GCA 90 bp | ATACTAGTAACAGTTCTTGCTGTTGAGGACATGAAGCAAGACAAACACTTCTTCAATAGAGGGAGAGCATaGAGACACTGCCTGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: ILVTVLAVEDMKQDKHFFNRGRA*RHCLES Trigger: GCTTTCCAGGCAGTGTCTGCATGCTCTCCCTCTATT...GAAGAAGTGTTTGTCTTGCTTCATGTCCTCAACAGCAAGAACTGTTACTAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | CCCACTATGGAAATCAACATGGGGGTTTCTCAGAAAATTAGGAATTGGTCAACCAGTATGGGGGAAAATTaGAACAGGTGGACCTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: PTMEINMGVSQKIRNWSTSMGEN*NRWTFR Trigger: CCTAAAGGTCCACCTGTTCCAATTTTCCCCCATACT...GGTTGACCAATTCCTAATTTTCTGAGAAACCCCCATGTTGATTTCCATAGTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGAGTGGGGATGTCTTTGACTATATTGCCTTGTGTGAAGCTTTTCCTCCTTACTGTCTTAGGTTTTaGGGAATCTGGAATAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SGSGDVFDYIALCEAFPPYCLRF*GIWNKV Trigger: AACCTTATTCCAGATTCCCCAAAACCTAAGACAGTA...AGGAGGAAAAGCTTCACACAAGGCAATATAGTCAAAGACATCCCCACTCCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAAATCAACATGGGGGTTCTGAAGCAGCAATCATaGAGTCTGAATGGATCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LLVRIQTCIPTMEINMGVLKQQS*SLNGSV Trigger: CACAGATCCATTCAGACTCCATGATTGCTGCTTCAG...AACCCCCATGTTGATTTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | ACAAACACTTCTTCATTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAATGGATGGACTGGGAGTaGTTTGGCACGGGAATAGAA | + |
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Preference number: 2 (lower is better) Translates to: TNTSSLLVRIQTCIPTMEWMDWE*FGTGIE Trigger: TTCTATTCCCGTGCCAAACCACTCCCAGTCCATCCA...TTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAATGAAGAAGTGTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAAATCAACATGGGGGTTTGGACCTTTAGGAGGTaGTATGGCAAACTAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: LLVRIQTCIPTMEINMGVWTFRR*YGKLMK Trigger: CTTCATTAGTTTGCCATATCACCTCCTAAAGGTCCA...AACCCCCATGTTGATTTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR GCA 90 bp | ATGGAGTCTGAATGGATCTGTGCTGTGTCTAAACACATGCTGTGGCTGTTTAGCCATTGCATCTTGTTATaGCATGTTTTGGTTGATATC | + |
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Preference number: 2 (lower is better) Translates to: MESEWICAVSKHMLWLFSHCILL*HVLVDI Trigger: GATATCAACCAAAACATGGCATAACAAGATGCAATG...GCTAAACAGCCACAGCATGTGTTTAGACACAGCACAGATCCATTCAGACTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAAATCAACATGGGGGTTAAGAGGCAATGGATTTaGGGAAGAGAAGAAATGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLVRIQTCIPTMEINMGVKRQWI*GREEMQ Trigger: CTGCATTTCTTCTCTTCCCCAAATCCATTGCCTCTT...AACCCCCATGTTGATTTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | ATACTAGTAACAGTTCTTGCTGTTGAGGACATGAAGCAAGACAAACACTTCTTCTGTGGCTGTTTAGCTTaGGGTTTTTGTGAGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: ILVTVLAVEDMKQDKHFFCGCLA*GFCETP Trigger: AGGAGTCTCACAAAAACCCCAAGCTAAACAGCCACA...GAAGAAGTGTTTGTCTTGCTTCATGTCCTCAACAGCAAGAACTGTTACTAGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTGATGCATACTCACTTAATCTACAAGATACTCTaGGGTAAAGATAGTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: RQLRLSKVSQTNVMHTHLIYKIL*GKDSSE Trigger: CTCTGAACTATCTTTACCCCAGAGTATCTTGTAGAT...TAAGTGAGTATGCATCACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAAATCAACATGGGGGTTTCCTCAACCAAAGAATaGATGAAGAACATGTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LLVRIQTCIPTMEINMGVSSTKE*MKNMWH Trigger: ATGCCACATGTTCTTCATTCATTCTTTGGTTGAGGA...AACCCCCATGTTGATTTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | CCCACTATGGAAATCAACATGGGGGTTTCTCAGAAAATTAGGAATTGGTCAACCGAAATGGAAATTTGCTaGCAAATGGATGGAATTAGA | + |
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Preference number: 2 (lower is better) Translates to: PTMEINMGVSQKIRNWSTEMEIC*QMDGIR Trigger: TCTAATTCCATCCATTTGCCAGCAAATTTCCATTTC...GGTTGACCAATTCCTAATTTTCTGAGAAACCCCCATGTTGATTTCCATAGTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | CCCACTATGGAAATCAACATGGGGGTTTCTCAGAAAATTAGGAATTGGTCAACCGGCATATTTACACAATaGAGCATTACTCAGACATTA | + |
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Preference number: 2 (lower is better) Translates to: PTMEINMGVSQKIRNWSTGIFTQ*SITQTL Trigger: TAATGTCTGAGTAATGCTCCATTGTGTAAATATGCC...GGTTGACCAATTCCTAATTTTCTGAGAAACCCCCATGTTGATTTCCATAGTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR CAA 90 bp | ATGAAGCAAGACAAACACTTCTTCATTGCTGGTGAGAATACAAACTaGTATACCCACTATGGAAATCAACATGGGGGTTTCTCAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: MKQDKHFFIAGENTN*YTHYGNQHGGFSEN Trigger: ATTTTCTGAGAAACCCCCATGTTGATTTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAATGAAGAAGTGTTTGTCTTGCTTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | CATTCCTTCTGGCTAGTTTTCATAGTGCCAGAAGTTATTCAGGCTATTGAGAAACATTGCCACTGTCTCTaGAAGATTATAGTTCATGAT | + |
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Preference number: 2 (lower is better) Translates to: HSFWLVFIVPEVIQAIEKHCHCL*KIIVHD Trigger: ATCATGAACTATAATCTTTCAGAGACAGTGGCAATG...TTTCTCAATAGCCTGAATAACTTCTGGCACTATGAAAACTAGCCAGAAGGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR TCA 90 bp | ATACTAGTAACAGTTCTTGCTGTTGAGGACATGAAGCAAGACAAACACTTCTTCGCAATCCAATATACATaGGTGTTATCTATGTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: ILVTVLAVEDMKQDKHFFAIQYT*VLSMCQ Trigger: TTGGCACATAGATAACACTCATGTATATTGGATTGC...GAAGAAGTGTTTGTCTTGCTTCATGTCCTCAACAGCAAGAACTGTTACTAGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAAATCAACATGGGGGTTCAGAAAATTAGGAATTaGTCAACCTCAAGACATAGT | + |
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Preference number: 2 (lower is better) Translates to: LLVRIQTCIPTMEINMGVQKIRN*STSRHS Trigger: ACTATGTCTTGAGGTTGACCAATTCCTAATTTTCTG...AACCCCCATGTTGATTTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR GCA 90 bp | CATTCCTTCTGGCTAGTTTTCATAGTGCCAGAAGTTATTCAGGCTATTGAGAAAGTTCTTATATCTCCATaGAGTATGCATAGCAGAATT | + |
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Preference number: 2 (lower is better) Translates to: HSFWLVFIVPEVIQAIEKVLISP*SMHSRI Trigger: AATTCTGCTATGCATACTGCATGGAGATATAAGAAC...TTTCTCAATAGCCTGAATAACTTCTGGCACTATGAAAACTAGCCAGAAGGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR GCA 90 bp | ACAAACACTTCTTCATTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAATTTGGAATTACAGTCTaGTTTACATTAGGGAACACA | + |
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Preference number: 2 (lower is better) Translates to: TNTSSLLVRIQTCIPTMEFGITV*FTLGNT Trigger: TGTGTTCCCTAATGTAAAGCAGACTGTAATTCCAAA...TTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAATGAAGAAGTGTTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR CCA 72 bp | GTGCTGTGTCTAAACACATGCTGTGGCTGTTTAGCTTaGGGTTTTTGTGAGACTCCTTACAGTGGGAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: VLCLNTCCGCLA*GFCETPYSGSG Trigger: CCCACTCCCACTGTAAGGAGTCTCACAAAAACCCCAAGCTAAACAGCCACAGCATGTGTTTAGACACAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR CCA 72 bp | ATCACAGAGACTGAAGCAGCAATCATGGAGTCTGAATaGATCTGTGCTGTGTCTAAACACATGCTGTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: ITETEAAIMESE*ICAVSKHMLWL Trigger: CAGCCACAGCATGTGTTTAGACACAGCACAGATCCATTCAGACTCCATGATTGCTGCTTCAGTCTCTGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR CCA 72 bp | GGACTCAGAGGATCACAGAGACTGAAGCAGCAATCATaGAGTCTGAATGGATCTGTGCTGTGTCTAAACACA | + |
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Preference number: 3 (lower is better) Translates to: GLRGSQRLKQQS*SLNGSVLCLNT Trigger: TGTGTTTAGACACAGCACAGATCCATTCAGACTCCATGATTGCTGCTTCAGTCTCTGTGATCCTCTGAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR GCA 72 bp | TGGAGTCTGAATGGATCTGTGCTGTGTCTAAACACATaGTGTGGCTGTTTAGCTTGGGGTTTTTGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: WSLNGSVLCLNT*CGCLAWGFCET Trigger: AGTCTCACAAAAACCCCAAGCTAAACAGCCACAGCATGTGTTTAGACACAGCACAGATCCATTCAGACTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR CCA 72 bp | ATAGTTCAGAGCTTGTGGGAATGTTCAACTAGTGACTaGTCTAACTTGAGGCCCAAGGTAATAGAGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: IVQSLWECSTSD*SNLRPKVIEGE Trigger: CTCTCCCTCTATTACCTTGGGCCTCAAGTTAGACCAGTCACTAGTTGAACATTCCCACAAGCTCTGAACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGTCTGAATGGATCTGTGCTGTGTCTAAACACATGCTGTGGCTGTTTAGCTTGTTATGCCATGTTTaGGTTGATATCACTGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: MESEWICAVSKHMLWLFSLLCHV*VDITGW Trigger: CCACCCAGTGATATCAACCAAAACATGGCATAACAA...GCTAAACAGCCACAGCATGTGTTTAGACACAGCACAGATCCATTCAGACTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR TCA 72 bp | GATGGCTCTAGGAATGATAAATGGGTCTCCCTGGAATaGAGAAATAGAATAGCAACTGTGGATGGACTGGGA | + |
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Preference number: 3 (lower is better) Translates to: DGSRNDKWVSLE*RNRIATVDGLG Trigger: TCCCAGTCCATCCACAGTTGCTATTCTATTTCTTCATTCCAGGGAGACCCATTTATCATTCCTAGAGCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
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| 3UTR-3UTR CAA 90 bp | AGGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTGATGCATACTCACTTATATGCCATGTTTTGGTaGATATCACTGGGTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RQLRLSKVSQTNVMHTHLYAMFW*ISLGGF Trigger: AAAGCCACCCAGTGATATCAACCAAAACATGGCATA...TAAGTGAGTATGCATCACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR TCA 72 bp | AAGCTTTTCCTCCTACTGGGATGCCTTGTCCAGACCTaGTATGAGGATTTGTGCTTAGTTTCATTGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: KLFLLLGCLVQT*YEDLCLVSLHL Trigger: AAGATGCAATGAAACTAAGCACAAATCCTCATATCAGGTCTGGACAAGGCATCCCAGTAGGAGGAAAAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR CCA 72 bp | ACAAGATACTCTGGGGTAAAGATAGTTCAGAGCTTGTaGGAATGTTCAACTAGTGACTGGTCTAACTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TRYSGVKIVQSL*ECSTSDWSNLR Trigger: CCTCAAGTTAGACCAGTCACTAGTTGAACATTCCCACAAGCTCTGAACTATCTTTACCCCAGAGTATCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGTCTGAATGGATCTGTGCTGTGTCTAAACACATGCTGTGGCTGTTTAGCTTGTGCTTAGTTTCATaGCATCTTGTTATGCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: MESEWICAVSKHMLWLFSLCLVS*HLVMPC Trigger: ACATGGCATAACAAGATGCAATGAAACTAAGCACAA...GCTAAACAGCCACAGCATGTGTTTAGACACAGCACAGATCCATTCAGACTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTGATGCATACTCACTTAAAGATAGTTCAGAGCTaGTGGGAATGTTCAACTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RQLRLSKVSQTNVMHTHLKIVQS*WECSTS Trigger: ACTAGTTGAACATTCCCACAAGCTCTGAACTATCTT...TAAGTGAGTATGCATCACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR TCA 72 bp | TTTCCTCCTACTGGGATGCCTTGTCCAGACCTGATATaGGGATTTGTGCTTAGTTTCATTGCATCTTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: FPPTGMPCPDLI*GFVLSFIASCY Trigger: ATAACAAGATGCAATGAAACTAAGCACAAATCCTCATATCAGGTCTGGACAAGGCATCCCAGTAGGAGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR CCA 72 bp | CTTCAACCTACAACATGTTCCATCTACAAGATACTCTaGGGTAAAGATAGTTCAGAGCTTGTGGGAATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LQPTTCSIYKIL*GKDSSELVGMF Trigger: GAACATTCCCACAAGCTCTGAACTATCTTTACCCCAGAGTATCTTGTAGATGGAACATGTTGTAGGTTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAAATCAACATGGGGGTTTTTGACTATATTGCCTaGTGTGAAGCTTTTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLVRIQTCIPTMEINMGVFDYIA*CEAFPP Trigger: AGGAGGAAAAGCTTCACACAAGGCAATATAGTCAAA...AACCCCCATGTTGATTTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR TCA 72 bp | ATTAAGCTATGTGGGATAGTAATAAATGCACTTGATTaGAACCCCTGGGAGACCTTCTCTTTTCTGAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: IKLCGIVINALD*NPWETFSFLRV Trigger: TACCCTCAGAAAAGAGAAGGTCTCCCAGGGGTTTCAATCAAGTGCATTTATTACTATCCCACATAGCTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR TCA 72 bp | GGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTaGTGCATACTCACTTATAAACTGATAATAGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: GNSDSVRYPRQT*CILTYKLIIAI Trigger: AATAGCTATTATCAGTTTATAAGTGAGTATGCATCACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR TCA 72 bp | GCTGGCAAATGGATGGAATTAGAAAAATTATTATCATaGGTAAGGCAACTCAGACTCAGTAAGGTATCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AGKWMELEKLLS*VRQLRLSKVSQ Trigger: CTGGGATACCTTACTGAGTCTGAGTTGCCTTACTCATGATAATAATTTTTCTAATTCCATCCATTTGCCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR TCA 72 bp | GGACATGAAGCAAGACAAACACTTCTTCATTGCTGGTaGGAATACAAACTTGTATACCCACTATGGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GHEARQTLLHCW*EYKLVYPLWKS Trigger: TGATTTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAATGAAGAAGTGTTTGTCTTGCTTCATGTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR GCA 72 bp | CACCCAAAAGACACTCAATCCTGTCACAAGGACACTTaGTCAACTGTGTTAGTAGCAGTTTTATTCATAATA | + |
|
Preference number: 3 (lower is better) Translates to: HPKDTQSCHKDT*STVLVAVLFII Trigger: TATTATGAATAAAACTGCTACTAACACAGTTGAGCAAGTGTCCTTGTGACAGGATTGAGTGTCTTTTGGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR-3UTR CAA 90 bp | ACAAACACTTCTTCATTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAATGTTTCCTAGGATCATaGGAAATTTCATTCCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TNTSSLLVRIQTCIPTMECFLGS*EISFLL Trigger: CAGAAGGAATGAAATTTCCAATGATCCTAGGAAACA...TTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAATGAAGAAGTGTTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR TCA 72 bp | GCTAGTTTTCATAGTGCCAGAAGTTATTCAGGCTATTaGGAAAGAATAGAAAATATGGGTCTAATCAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: ASFHSARSYSGY*ERIENMGLIKH Trigger: GTGCTTGATTAGACCCATATTTTCTATTCTTTCTCAATAGCCTGAATAACTTCTGGCACTATGAAAACTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR CCA 72 bp | GACTTGTCAAGCAAGATCAGCATACTAGTACAAGAATaGTTTGGCTATCATAGGTTAACTAACTATTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: DLSSKISILVQE*FGYHRLTNYFP Trigger: TGGAAAATAGTTAGTTAACCTATGATAGCCAAACCATTCTTGTACTAGTATGCTGATCTTGCTTGACAAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR CCA 72 bp | GAAATCAACATGGGGGTTTCTCAGAAAATTAGGAATTaGTCAACCTCAAGACATAGTTATATAACTCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EINMGVSQKIRN*STSRHSYITLG Trigger: TCCAAGAGTTATATAACTATGTCTTGAGGTTGACCAATTCCTAATTTTCTGAGAAACCCCCATGTTGATTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR GCA 90 bp | AGCAGGACTCAGAGGATCACAGAGACTGAAGCAGCAATCATGGAGTCTGAATGGAGGCAGTTGCACAACTaGCAAAAGCTGACTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRTQRITETEAAIMESEWRQLHN*QKLTHG Trigger: GCCATGAGTCAGCTTTTGGCAGTTGTGCAACTGCCT...CCATTCAGACTCCATGATTGCTGCTTCAGTCTCTGTGATCCTCTGAGTCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR CAA 72 bp | CTCCTTACAGTGGGAGTGGGGATGTCTTTGACTATATaGCCTTGTGTGAAGCTTTTCCTCCTACTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLTVGVGMSLTI*PCVKLFLLLGC Trigger: GCATCCCAGTAGGAGGAAAAGCTTCACACAAGGCAATATAGTCAAAGACATCCCCACTCCCACTGTAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR TCA 90 bp | AGGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTGATGCATACTCACTTACTTAGGAGTGGTGGCTaGGGAAAGCCACATATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQLRLSKVSQTNVMHTHLLRSGG*GKPHIN Trigger: GTTGATATGTGGCTTTCCTCAGCCACCACTCCTAAG...TAAGTGAGTATGCATCACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAAATCAACATGGGGGTTGTGAGCAGTGCATGTTaGCAGAGCCTTAGATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLVRIQTCIPTMEINMGVVSSAC*QSLRCP Trigger: GGGGCATCTAAGGCTCTGTCAACATGCACTGCTCAC...AACCCCCATGTTGATTTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR TCA 90 bp | AGTGGGAGTGGGGATGTCTTTGACTATATTGCCTTGTGTGAAGCTTTTCCTCCTATCACTACTGTGATGTaGGCAGTGCATGTTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGSGDVFDYIALCEAFPPITTVM*AVHVDR Trigger: TCTGTCAACATGCACTGCTCACATCACAGTAGTGAT...AGGAGGAAAAGCTTCACACAAGGCAATATAGTCAAAGACATCCCCACTCCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR TCA 90 bp | CCCACTATGGAAATCAACATGGGGGTTTCTCAGAAAATTAGGAATTGGTCAACCCTGTCAATTTCCATATaGCCACAGAGAGGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTMEINMGVSQKIRNWSTLSISI*PQRGSC Trigger: GCAACTGCCTCTCTGTGGTCATATGGAAATTGACAG...GGTTGACCAATTCCTAATTTTCTGAGAAACCCCCATGTTGATTTCCATAGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR CAA 72 bp | TTTGTGAGACTCCTTACAGTGGGAGTGGGGATGTCTTaGACTATATTGCCTTGTGTGAAGCTTTTCCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FVRLLTVGVGMS*TILPCVKLFLL Trigger: TAGGAGGAAAAGCTTCACACAAGGCAATATAGTCAAAGACATCCCCACTCCCACTGTAAGGAGTCTCACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGTGAGAATACAAACTTGTATACCCACTATGGAAATCAACATGGGGGTTCTGGGACATGCAGCCTaGAAAGGAAATGATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVRIQTCIPTMEINMGVLGHAA*KGNDLW Trigger: CCAAAGATCATTTCCTTTGCAGGCTGCATGTCCCAG...AACCCCCATGTTGATTTCCATAGTGGGTATACAAGTTTGTATTCTCACCAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR CCA 90 bp | ATACTAGTAACAGTTCTTGCTGTTGAGGACATGAAGCAAGACAAACACTTCTTCTGGTCAAAGAAGACCTaGGACATGCAGCCTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILVTVLAVEDMKQDKHFFWSKKT*DMQPAK Trigger: CTTTGCAGGCTGCATGTCCCAGGTCTTCTTTGACCA...GAAGAAGTGTTTGTCTTGCTTCATGTCCTCAACAGCAAGAACTGTTACTAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR CCA 90 bp | CCCACTATGGAAATCAACATGGGGGTTTCTCAGAAAATTAGGAATTGGTCAACCCCAAAAGCTGACTCATaGCATGCACAAAGGCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: PTMEINMGVSQKIRNWSTPKADS*HAQRQL Trigger: CAATTGCCTTTGTGCATGCCATGAGTCAGCTTTTGG...GGTTGACCAATTCCTAATTTTCTGAGAAACCCCCATGTTGATTTCCATAGTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR CAA 72 bp | ATCTTCTGTAACCAGGCTAGACTCTCAGTGATGGGATaGAAAGACCAACACAACCACAAATCCTTCAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: IFCNQARLSVMG*KDQHNHKSFNL Trigger: TAGGTTGAAGGATTTGTGGTTGTGTTGGTCTTTCAATCCCATCACTGAGAGTCTAGCCTGGTTACAGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR TCA 90 bp | CCCACTATGGAAATCAACATGGGGGTTTCTCAGAAAATTAGGAATTGGTCAACCCAAAAGCACAAATTCTaGTACCAGGGAGCGATTACT | + |
|
Preference number: 4 (lower is better) Translates to: PTMEINMGVSQKIRNWSTQKHKF*YQGAIT Trigger: AGTAATCGCTCCCTGGTATCAGAATTTGTGCTTTTG...GGTTGACCAATTCCTAATTTTCTGAGAAACCCCCATGTTGATTTCCATAGTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR TCA 90 bp | CATTCCTTCTGGCTAGTTTTCATAGTGCCAGAAGTTATTCAGGCTATTGAGAAAATGAAGAGTAAGACCTaGAGATTCTGTGAGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSFWLVFIVPEVIQAIEKMKSKT*RFCERA Trigger: TGCCCGCTCACAGAATCTTCAGGTCTTACTCTTCAT...TTTCTCAATAGCCTGAATAACTTCTGGCACTATGAAAACTAGCCAGAAGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR CCA 90 bp | AGGCAACTCAGACTCAGTAAGGTATCCCAGACAAACGTGATGCATACTCACTTAAAGTACATGGGAGAATaGAGATTCTTGTCAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RQLRLSKVSQTNVMHTHLKYMGE*RFLSVM Trigger: CATCACTGACAAGAATCTCCATTCTCCCATGTACTT...TAAGTGAGTATGCATCACGTTTGTCTGGGATACCTTACTGAGTCTGAGTTGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR CAA 72 bp | TCTACAAGATACTCTGGGGTAAAGATAGTTCAGAGCTaGTGGGAATGTTCAACTAGTGACTGGTCTAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: STRYSGVKIVQS*WECSTSDWSNL Trigger: CAAGTTAGACCAGTCACTAGTTGAACATTCCCACAAGCTCTGAACTATCTTTACCCCAGAGTATCTTGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS-3UTR TCA 90 bp | CATTCCTTCTGGCTAGTTTTCATAGTGCCAGAAGTTATTCAGGCTATTGAGAAAAGCTCTGGCGAACAGTaGGAAGGATATATGTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSFWLVFIVPEVIQAIEKSSGEQ*EGYMCK Trigger: CTTACACATATATCCTTCTCACTGTTCGCCAGAGCT...TTTCTCAATAGCCTGAATAACTTCTGGCACTATGAAAACTAGCCAGAAGGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| 3UTR CAA 72 bp | ACACCCAAAAGACACTCAATCCTGTCACAAGGACACTaGCTCAACTGTGTTAGTAGCAGTTTTATTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: TPKRHSILSQGH*LNCVSSSFIHN Trigger: ATTATGAATAAAACTGCTACTAACACAGTTGAGCAAGTGTCCTTGTGACAGGATTGAGTGTCTTTTGGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS CCA 90 bp | TATGACCACAGAGAGGCAGTTGCACAACTGCCAAAAGCTGACTCATaGCATGCACAAAGGCAATTGCCCAGGAAGTTAACACCAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YDHREAVAQLPKADS*HAQRQLPRKLTPTQ Trigger: CTGGGTTGGTGTTAACTTCCTGGGCAATTGCCTTTGTGCATGCCATGAGTCAGCTTTTGGCAGTTGTGCAACTGCCTCTCTGTGGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080094.2 ENSMUST00000207590.4 |
||
| CDS-3UTR CAA 90 bp | ATGGAGTCTGAATGGATCTGTGCTGTGTCTAAACACATGCTGTGGCTGTTTAGCTCCATGCAAGCTAGCTaGATTATAAGTGGTATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MESEWICAVSKHMLWLFSSMQAS*IISGMS Trigger: TGACATACCACTTATAATCAAGCTAGCTTGCATGGA...GCTAAACAGCCACAGCATGTGTTTAGACACAGCACAGATCCATTCAGACTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS GCA 90 bp | TACTGCACCAACACAATGGTCAAAGAAGACCTGGGACATGCAGCCTaGAAAGGAAATGATCTTTGGTTCTTTGAGAAAATCTGTGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: YCTNTMVKEDLGHAA*KGNDLWFFEKICDH Trigger: ATGATCACAGATTTTCTCAAAGAACCAAAGATCATTTCCTTTGCAGGCTGCATGTCCCAGGTCTTCTTTGACCATTGTGTTGGTGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080094.2 ENSMUST00000207590.4 |
||
| CDS-3UTR CAA 90 bp | CATTCCTTCTGGCTAGTTTTCATAGTGCCAGAAGTTATTCAGGCTATTGAGAAAGGAGAATGGAGATTCTaGTCAGTGATGATTAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSFWLVFIVPEVIQAIEKGEWRF*SVMIKN Trigger: GTTCTTAATCATCACTGACAAGAATCTCCATTCTCC...TTTCTCAATAGCCTGAATAACTTCTGGCACTATGAAAACTAGCCAGAAGGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207590.4 |
||
| CDS CCA 72 bp | AGAGAGGCAGTTGCACAACTGCCAAAAGCTGACTCATaGCATGCACAAAGGCAATTGCCCAGGAAGTTAACA | + |
|
Preference number: 6 (lower is better) Translates to: REAVAQLPKADS*HAQRQLPRKLT Trigger: TGTTAACTTCCTGGGCAATTGCCTTTGTGCATGCCATGAGTCAGCTTTTGGCAGTTGTGCAACTGCCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080094.2 ENSMUST00000207590.4 |
||
| CDS CAA 72 bp | GAAACTGTCAATTTCCATATGACCACAGAGAGGCAGTaGCACAACTGCCAAAAGCTGACTCATGGCATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ETVNFHMTTERQ*HNCQKLTHGMH Trigger: GTGCATGCCATGAGTCAGCTTTTGGCAGTTGTGCAACTGCCTCTCTGTGGTCATATGGAAATTGACAGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080094.2 ENSMUST00000207590.4 |
||
| CDS GCA 72 bp | AATTTCCATATGACCACAGAGAGGCAGTTGCACAACTaGCAAAAGCTGACTCATGGCATGCACAAAGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: NFHMTTERQLHN*QKLTHGMHKGN Trigger: ATTGCCTTTGTGCATGCCATGAGTCAGCTTTTGGCAGTTGTGCAACTGCCTCTCTGTGGTCATATGGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080094.2 ENSMUST00000207590.4 |
||
| CDS CCA 72 bp | ATCTCTACTGCACCAACACAATGGTCAAAGAAGACCTaGGACATGCAGCCTGCAAAGGAAATGATCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ISTAPTQWSKKT*DMQPAKEMIFG Trigger: ACCAAAGATCATTTCCTTTGCAGGCTGCATGTCCCAGGTCTTCTTTGACCATTGTGTTGGTGCAGTAGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080094.2 ENSMUST00000207590.4 |
||
| CDS GCA 72 bp | AACACAATGGTCAAAGAAGACCTGGGACATGCAGCCTaGAAAGGAAATGATCTTTGGTTCTTTGAGAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: NTMVKEDLGHAA*KGNDLWFFEKI Trigger: GATTTTCTCAAAGAACCAAAGATCATTTCCTTTGCAGGCTGCATGTCCCAGGTCTTCTTTGACCATTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080094.2 ENSMUST00000207590.4 |
||