Pregenerated sensors for OLFR13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043605Ensembl transcript IDs: ENSMUST00000216179.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACTTTCTTCTAGGGCACAAACCTCCCATAGAGGTGATTTGCTGTaGAGTGAAGAGATTCTGACTTCAGGCCCTCAAAGGAGGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: GLSSRAQTSHRGDLL*SEEILTSGPQRRKE Trigger: TTCCTTCCTCCTTTGAGGGCCTGAAGTCAGAATCTCTTCACTTCACAGCAAATCACCTCTATGGGAGGTTTGTGCCCTAGAAGAAAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR TCA 90 bp | TCAGAGCTTCTATATGGCCACAGAACCCTCACTGCGGTGCCTTTCTaGAATATAGCAGAAACCTCAGGAAAGGAGGTTTTATTCTCCGGT | + |
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Preference number: 1 (lower is better) Translates to: SELLYGHRTLTAVPF*NIAETSGKEVLFSG Trigger: ACCGGAGAATAAAACCTCCTTTCCTGAGGTTTCTGCTATATTTCAGAAAGGCACCGCAGTGAGGGTTCTGTGGCCATATAGAAGCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR GCA 90 bp | AGTTCTCATATACTTGGCATTATCTGTCCTCAAGATTCCCAGAATTaGACTGTTCCCAGTCTCCAGATGGTTCTGGTAAAGCTGTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SSHILGIICPQDSQN*TVPSLQMVLVKLSG Trigger: CCCTGACAGCTTTACCAGAACCATCTGGAGACTGGGAACAGTGCAATTCTGGGAATCTTGAGGACAGATAATGCCAAGTATATGAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR TCA 90 bp | GTCAGTGACCCTATTTTCTATAACCAAATAGATTCTGATATGTACTaGTGTGAGCTACTGTGCTCAAACTTATATCCTCTACAGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: VSDPIFYNQIDSDMY*CELLCSNLYPLQGG Trigger: CCCTCCCTGTAGAGGATATAAGTTTGAGCACAGTAGCTCACATCAGTACATATCAGAATCTATTTGGTTATAGAAAATAGGGTCACTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR GCA 90 bp | GAATGGATTTTCAGAAATAGCCACAAGCAGTCATCCAAGCTTTCCTaGTCCATAGATTGTAAGTGTCTGAAAAACATGGTACAACAATCA | + |
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Preference number: 1 (lower is better) Translates to: EWIFRNSHKQSSKLS*SIDCKCLKNMVQQS Trigger: TGATTGTTGTACCATGTTTTTCAGACACTTACAATCTATGGAGCAGGAAAGCTTGGATGACTGCTTGTGGCTATTTCTGAAAATCCATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR CCA 90 bp | TTACTGGACACAGAGATGTCACAGTGTTATTATGGCAGACAATCATaGAATGTACAAACTGCTTCTTATAGCATAACCTTATGGGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: LLDTEMSQCYYGRQS*NVQTASYSITLWGN Trigger: ATTTCCCCATAAGGTTATGCTATAAGAAGCAGTTTGTACATTCCATGATTGTCTGCCATAATAACACTGTGACATCTCTGTGTCCAGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCAGAGCTTCTATATGGCCACAGAACCCTCACTGCGGTGCCTTTCTGAAAAGTTTAGCTTCTCCTTaGTGGAGCCTGGATTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LLRASIWPQNPHCGAFLKSLASP*WSLDSL Trigger: CAAGGAATCCAGGCTCCATCAAGGAGAAGCTAAACT...TTTCAGAAAGGCACCGCAGTGAGGGTTCTGTGGCCATATAGAAGCTCTGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CCA 90 bp | GGAATTAAAGGGAGAGTAAGTTCAGGGAAGGGCTCAAGGATCTCAGAAAGGGAAGGTGGGGAGGTACTGTaGGAGCTTGAAGGAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: GIKGRVSSGKGSRISEREGGEVL*ELEGRQ Trigger: TTGCCTTCCTTCAAGCTCCCACAGTACCTCCCCACC...TTCCCTTTCTGAGATCCTTGAGCCCTTCCCTGAACTTACTCTCCCTTTAATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCAAGGATCTCAGAAAGGGAATCAGAGGGGAGCTTTCACGAGCCCTATCTCAAGAGATGCTTGGGATaGTTTTCACCAAAGGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: GSRISERESEGSFHEPYLKRCLG*FSPKVH Trigger: ATGAACCTTTGGTGAAAATCATCCCAAGCATCTCTT...GAGATAGGGCTCGTGAAAGCTCCCCTCTGATTCCCTTTCTGAGATCCTTGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGGATCTCAGAAAGGGAATCAGAGGGGAGCTTTCACGAGCCCTATCTCCTCAGTAATGCATATGCTCTaGATGGTTAGAACCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: QGSQKGNQRGAFTSPISSVMHML*MVRTLL Trigger: CAAGAGGGTTCTAACCATCCAGAGCATATGCATTAC...TGAGGAGATAGGGCTCGTGAAAGCTCCCCTCTGATTCCCTTTCTGAGATCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCAGAGCTTCTATATGGCCACAGAACCCTCACTGCGGTGCCTTTCTGAAAAAACCAAGAGATGCTTaGGATGATTTTCACCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLRASIWPQNPHCGAFLKKPRDA*DDFHQR Trigger: CCTTTGGTGAAAATCATCCCAAGCATCTCTTGGTTT...TTTCAGAAAGGCACCGCAGTGAGGGTTCTGTGGCCATATAGAAGCTCTGAGGAG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCAAGGATCTCAGAAAGGGAATCAGAGGGGAGCTTTCACGAGCCCTATCTCCAGTTCTCATATACTTaGCATTATCTGTCCTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: GSRISERESEGSFHEPYLQFSYT*HYLSSR Trigger: TCTTGAGGACAGATAATGCCAAGTATATGAGAACTG...GAGATAGGGCTCGTGAAAGCTCCCCTCTGATTCCCTTTCTGAGATCCTTGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGGATCTCAGAAAGGGAATCAGAGGGGAGCTTTCACGAGCCCTATCTCCTCAACTCATAGTCTACTTTaGTATTTTTACTGGACACAG | + |
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Preference number: 2 (lower is better) Translates to: QGSQKGNQRGAFTSPISSTHSLL*YFYWTQ Trigger: CTGTGTCCAGTAAAAATAGCAAAGTAGACTATGAGT...TGAGGAGATAGGGCTCGTGAAAGCTCCCCTCTGATTCCCTTTCTGAGATCCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR GCA 90 bp | GAAACCTCAGGAAAGGAGGTTTTATTCTCCGGTGGCTCACTCTGTTTAACAGCTCCCATAGAGGTGATTTaGTGTGAAGTGAAGAGATTC | + |
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Preference number: 2 (lower is better) Translates to: ETSGKEVLFSGGSLCLTAPIEVI*CEVKRF Trigger: GAATCTCTTCACTTCACAGCAAATCACCTCTATGGG...AGCTGTTAAACAGAGTGAGCCACCGGAGAATAAAACCTCCTTTCCTGAGGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CCA 90 bp | ACACACATTAGGAAACATACACAGCCATTCAGCACACCCAGGAGATGGCAGCTCCCACAATGTTTATTCTaGACCAAAAACCAAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: THIRKHTQPFSTPRRWQLPQCLF*TKNQEM Trigger: CATCTCTTGGTTTTTGGTCCAGAATAAACATTGTGG...GAGCTGCCATCTCCTGGGTGTGCTGAATGGCTGTGTATGTTTCCTAATGTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CCA 90 bp | ACACACATTAGGAAACATACACAGCCATTCAGCACACCCAGGAGATGGCAGCTCGTTAAGGGAAAATCTTaGTGCTTTACTGGTCATTCA | + |
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Preference number: 2 (lower is better) Translates to: THIRKHTQPFSTPRRWQLVKGKS*CFTGHS Trigger: TGAATGACCAGTAAAGCACCAAGATTTTCCCTTAAC...GAGCTGCCATCTCCTGGGTGTGCTGAATGGCTGTGTATGTTTCCTAATGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CCA 90 bp | AACCCTCACTGCGGTGCCTTTCTGAAATATAGCAGAAACCTCAGGAAAGGAGGTCTGAGGAATCTGAGATaGGATAAATGTTTCTCATGG | + |
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Preference number: 2 (lower is better) Translates to: NPHCGAFLKYSRNLRKGGLRNLR*DKCFSW Trigger: CCATGAGAAACATTTATCCCATCTCAGATTCCTCAG...ACCTCCTTTCCTGAGGTTTCTGCTATATTTCAGAAAGGCACCGCAGTGAGGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR TCA 90 bp | TACATGGGAGCAGAGCATCATTCCATAAGGTGTCCTACTATAATTTTTATTAAGGGTACTGTGGGAGCTTaGAGGAAGGCAAAGGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: YMGAEHHSIRCPTIIFIKGTVGA*RKAKVG Trigger: TCCTACCTTTGCCTTCCTTCAAGCTCCCACAGTACC...CTTAATAAAAATTATAGTAGGACACCTTATGGAATGATGCTCTGCTCCCATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CCA 90 bp | GACTTTCTTCTAGGGCACAAACCTCCCATAGAGGTGATTTGCTGTGAAGTGAAGGTCACAGTGTTATTATaGCAGACAATCATGGAATGT | + |
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Preference number: 2 (lower is better) Translates to: DFLLGHKPPIEVICCEVKVTVLL*QTIMEC Trigger: ACATTCCATGATTGTCTGCCATAATAACACTGTGAC...CTTCACTTCACAGCAAATCACCTCTATGGGAGGTTTGTGCCCTAGAAGAAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR CAA 90 bp | TGTGGAGGCGGTTATTTTAGGACATTGTTCCATAGCCAACACTGTTaGGTCACTGTAAAGTTATCTGAAGGTATAAGATCAAAGCATTCG | + |
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Preference number: 2 (lower is better) Translates to: CGGGYFRTLFHSQHC*VTVKLSEGIRSKHS Trigger: CGAATGCTTTGATCTTATACCTTCAGATAACTTTACAGTGACCAAACAGTGTTGGCTATGGAACAATGTCCTAAAATAACCGCCTCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR TCA 90 bp | TACATGGGAGCAGAGCATCATTCCATAAGGTGTCCTACTATAATTTTTATTAAGGAAGTGAAGAGATTCTaGCTTCAGGCCCTCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: YMGAEHHSIRCPTIIFIKEVKRF*LQALKG Trigger: TCCTTTGAGGGCCTGAAGTCAGAATCTCTTCACTTC...CTTAATAAAAATTATAGTAGGACACCTTATGGAATGATGCTCTGCTCCCATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR GCA 90 bp | TACATGGGAGCAGAGCATCATTCCATAAGGTGTCCTACTATAATTTTTATTAAGCCACAGAACCCTCACTaGGGTGCCTTTCTGAAATAT | + |
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Preference number: 2 (lower is better) Translates to: YMGAEHHSIRCPTIIFIKPQNPH*GAFLKY Trigger: ATATTTCAGAAAGGCACCGCAGTGAGGGTTCTGTGG...CTTAATAAAAATTATAGTAGGACACCTTATGGAATGATGCTCTGCTCCCATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CCA 90 bp | TACATGGGAGCAGAGCATCATTCCATAAGGTGTCCTACTATAATTTTTATTAAGCTAAGTTACATATCATaGTGGGGAGGTACTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: YMGAEHHSIRCPTIIFIKLSYIS*WGGTVG Trigger: TCCCACAGTACCTCCCCACCATGATATGTAACTTAG...CTTAATAAAAATTATAGTAGGACACCTTATGGAATGATGCTCTGCTCCCATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR TCA 90 bp | TACATGGGAGCAGAGCATCATTCCATAAGGTGTCCTACTATAATTTTTATTAAGTTCTACTCACTCCTGTaGTTGCAATCATACACAACA | + |
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Preference number: 2 (lower is better) Translates to: YMGAEHHSIRCPTIIFIKFYSLL*LQSYTT Trigger: TGTTGTGTATGATTGCAATCACAGGAGTGAGTAGAA...CTTAATAAAAATTATAGTAGGACACCTTATGGAATGATGCTCTGCTCCCATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGTTATGTTGTGTTTCAGGACATCTGCAAACTGTGGAAATAAAGCAATTCACTCATCCAAGCTTTCCTaGTCCATAGATTGTAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: FVMLCFRTSANCGNKAIHSSKLS*SIDCKC Trigger: ACACTTACAATCTATGGAGCAGGAAAGCTTGGATGA...GTGAATTGCTTTATTTCCACAGTTTGCAGATGTCCTGAAACACAACATAACAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTCAAGGATCTCAGAAAGGGAATCAGAGGGGAGCTTTCACGAGCCCTATCTCTCAAGATTCCCAGAATaGCACTGTTCCCAGTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: GSRISERESEGSFHEPYLSRFPE*HCSQSP Trigger: TGGAGACTGGGAACAGTGCAATTCTGGGAATCTTGA...GAGATAGGGCTCGTGAAAGCTCCCCTCTGATTCCCTTTCTGAGATCCTTGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR CCA 72 bp | AGCTTTCACGAGCCCTATCTCCTCAGAGCTTCTATATaGCCACAGAACCCTCACTGCGGTGCCTTTCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: SFHEPYLLRASI*PQNPHCGAFLK Trigger: TTTCAGAAAGGCACCGCAGTGAGGGTTCTGTGGCCATATAGAAGCTCTGAGGAGATAGGGCTCGTGAAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CAA 90 bp | AACCCTCACTGCGGTGCCTTTCTGAAATATAGCAGAAACCTCAGGAAAGGAGGTAGGTACTGTGGGAGCTaGAAGGAAGGCAAAGGTAGG | + |
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Preference number: 3 (lower is better) Translates to: NPHCGAFLKYSRNLRKGGRYCGS*KEGKGR Trigger: CCTACCTTTGCCTTCCTTCAAGCTCCCACAGTACCT...ACCTCCTTTCCTGAGGTTTCTGCTATATTTCAGAAAGGCACCGCAGTGAGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR TCA 72 bp | TCTAGGGCACAAACCTCCCATAGAGGTGATTTGCTGTaGAGTGAAGAGATTCTGACTTCAGGCCCTCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: SRAQTSHRGDLL*SEEILTSGPQR Trigger: CCTTTGAGGGCCTGAAGTCAGAATCTCTTCACTTCACAGCAAATCACCTCTATGGGAGGTTTGTGCCCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCAGAGCTTCTATATGGCCACAGAACCCTCACTGCGGTGCCTTTCTGAAAACTCCTTTTGTTATGTaGTGTTTCAGGACATCTGCA | + |
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Preference number: 3 (lower is better) Translates to: LLRASIWPQNPHCGAFLKTPFVM*CFRTSA Trigger: TGCAGATGTCCTGAAACACAACATAACAAAAGGAGT...TTTCAGAAAGGCACCGCAGTGAGGGTTCTGTGGCCATATAGAAGCTCTGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR TCA 72 bp | CCCATAGAGGTGATTTGCTGTGAAGTGAAGAGATTCTaGCTTCAGGCCCTCAAAGGAGGAAGGAAAAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: PIEVICCEVKRF*LQALKGGRKSL Trigger: GAGACTTTTCCTTCCTCCTTTGAGGGCCTGAAGTCAGAATCTCTTCACTTCACAGCAAATCACCTCTATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR TCA 72 bp | TTTATTCTCCGGTGGCTCACTCTGTTTAACAGCTCTTaGGGATCACAGGAGGCAAAGGGTCATGAGACTCAT | + |
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Preference number: 3 (lower is better) Translates to: FILRWLTLFNSS*GSQEAKGHETH Trigger: ATGAGTCTCATGACCCTTTGCCTCCTGTGATCCTCAAGAGCTGTTAAACAGAGTGAGCCACCGGAGAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR CCA 72 bp | AGGAGATGGCAGCTCTCATTACAGTTCTCATATACTTaGCATTATCTGTCCTCAAGATTCCCAGAATTGCAC | + |
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Preference number: 3 (lower is better) Translates to: RRWQLSLQFSYT*HYLSSRFPELH Trigger: GTGCAATTCTGGGAATCTTGAGGACAGATAATGCCAAGTATATGAGAACTGTAATGAGAGCTGCCATCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR GCA 72 bp | TTCAGAAATAGCCACAAGCAGTCATCCAAGCTTTCCTaGTCCATAGATTGTAAGTGTCTGAAAAACATGGTA | + |
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Preference number: 3 (lower is better) Translates to: FRNSHKQSSKLS*SIDCKCLKNMV Trigger: TACCATGTTTTTCAGACACTTACAATCTATGGAGCAGGAAAGCTTGGATGACTGCTTGTGGCTATTTCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR TCA 72 bp | TCTACTCACTCCTGTGATTGCAATCATACACAACAATaGCAAATAACAGCAGTGGTTAAGGGAAAATCTTGG | + |
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Preference number: 3 (lower is better) Translates to: STHSCDCNHTQQ*QITAVVKGKSW Trigger: CCAAGATTTTCCCTTAACCACTGCTGTTATTTGTCATTGTTGTGTATGATTGCAATCACAGGAGTGAGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCCTTTTGTTATGTTGTGTTTCAGGACATCTGCAAACTGTGGAAATAAAGCAGGTTATTTTAGGACATaGTTCCATAGCCAACACTGT | + |
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Preference number: 3 (lower is better) Translates to: TPFVMLCFRTSANCGNKAGYFRT*FHSQHC Trigger: ACAGTGTTGGCTATGGAACAATGTCCTAAAATAACC...TGCTTTATTTCCACAGTTTGCAGATGTCCTGAAACACAACATAACAAAAGGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR-3UTR CAA 90 bp | TACATGGGAGCAGAGCATCATTCCATAAGGTGTCCTACTATAATTTTTATTAAGACACACACACAGAGTTaGTTTTGTCACACACATACA | + |
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Preference number: 3 (lower is better) Translates to: YMGAEHHSIRCPTIIFIKTHTQS*FCHTHT Trigger: TGTATGTGTGTGACAAAACAAACTCTGTGTGTGTGT...CTTAATAAAAATTATAGTAGGACACCTTATGGAATGATGCTCTGCTCCCATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR TCA 72 bp | GTATTACAGTTTATGTTCCCATTCTACTCACTCCTGTaGTTGCAATCATACACAACAATGACAAATAACAGC | + |
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Preference number: 3 (lower is better) Translates to: VLQFMFPFYSLL*LQSYTTMTNNS Trigger: GCTGTTATTTGTCATTGTTGTGTATGATTGCAATCACAGGAGTGAGTAGAATGGGAACATAAACTGTAATAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR CCA 72 bp | ACAGAGATGTCACAGTGTTATTATGGCAGACAATCATaGAATGTACAAACTGCTTCTTATAGCATAACCTTA | + |
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Preference number: 3 (lower is better) Translates to: TEMSQCYYGRQS*NVQTASYSITL Trigger: TAAGGTTATGCTATAAGAAGCAGTTTGTACATTCCATGATTGTCTGCCATAATAACACTGTGACATCTCTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR CCA 72 bp | ATTTTTACTGGACACAGAGATGTCACAGTGTTATTATaGCAGACAATCATGGAATGTACAAACTGCTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: IFTGHRDVTVLL*QTIMECTNCFL Trigger: TAAGAAGCAGTTTGTACATTCCATGATTGTCTGCCATAATAACACTGTGACATCTCTGTGTCCAGTAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR CCA 72 bp | ACAATGTTTATTCTGGACCAAAAACCAAGAGATGCTTaGGATGATTTTCACCAAAGGTTCATGTTAAACAAT | + |
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Preference number: 3 (lower is better) Translates to: TMFILDQKPRDA*DDFHQRFMLNN Trigger: ATTGTTTAACATGAACCTTTGGTGAAAATCATCCCAAGCATCTCTTGGTTTTTGGTCCAGAATAAACATTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR GCA 90 bp | GGACATGACTTTGGGGACTTTCTTCTAGGGCACAAACCTCCCATAGAGGTGATTCACAAGGACAGACACTaGCCCAGCCAGGACCATCGT | + |
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Preference number: 4 (lower is better) Translates to: GHDFGDFLLGHKPPIEVIHKDRH*PSQDHR Trigger: ACGATGGTCCTGGCTGGGGCAGTGTCTGTCCTTGTG...AATCACCTCTATGGGAGGTTTGTGCCCTAGAAGAAAGTCCCCAAAGTCATGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR TCA 90 bp | CAAGGATCTCAGAAAGGGAATCAGAGGGGAGCTTTCACGAGCCCTATCTCCTCACCTTTGACCCTCTTCTaGCTGGATCTTCAGGATAGC | + |
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Preference number: 4 (lower is better) Translates to: QGSQKGNQRGAFTSPISSPLTLF*LDLQDS Trigger: GCTATCCTGAAGATCCAGTCAGAAGAGGGTCAAAGG...TGAGGAGATAGGGCTCGTGAAAGCTCCCCTCTGATTCCCTTTCTGAGATCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR TCA 90 bp | GGAATTAAAGGGAGAGTAAGTTCAGGGAAGGGCTCAAGGATCTCAGAAAGGGAAGGACCATCGTCTCATTaGGGTGTGTGTCTGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: GIKGRVSSGKGSRISEREGPSSH*GVCLHR Trigger: CCTGTGCAGACACACACCTCAATGAGACGATGGTCC...TTCCCTTTCTGAGATCCTTGAGCCCTTCCCTGAACTTACTCTCCCTTTAATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR TCA 90 bp | ACTTGTAGGGTCTCTGAAAGGAACTCTTCTGAAACTGTGTCCACGAAATTTTGGTCTGCATCCTCGGGCTaGGAGGAAATCCCAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: TCRVSERNSSETVSTKFWSASSG*EEIPGG Trigger: TCCTCCTGGGATTTCCTCTCAGCCCGAGGATGCAGA...CCAAAATTTCGTGGACACAGTTTCAGAAGAGTTCCTTTCAGAGACCCTACAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR CCA 90 bp | GACTTTCTTCTAGGGCACAAACCTCCCATAGAGGTGATTTGCTGTGAAGTGAAGGGCAGAGTAACGGAGTaGGTGACAGATTGCAACATA | + |
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Preference number: 4 (lower is better) Translates to: DFLLGHKPPIEVICCEVKGRVTE*VTDCNI Trigger: TATGTTGCAATCTGTCACCCACTCCGTTACTCTGCC...CTTCACTTCACAGCAAATCACCTCTATGGGAGGTTTGTGCCCTAGAAGAAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR CCA 90 bp | ACTTGTAGGGTCTCTGAAAGGAACTCTTCTGAAACTGTGTCCACGAAATTTTGGAGGAAGTCACTGCCATaGTGCTGCAAACTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TCRVSERNSSETVSTKFWRKSLP*CCKLSS Trigger: GCTGGAGAGTTTGCAGCACCATGGCAGTGACTTCCT...CCAAAATTTCGTGGACACAGTTTCAGAAGAGTTCCTTTCAGAGACCCTACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR CAA 72 bp | GCATACCCACCTTTGCTAGGAAGCAGAGACAAACAGTaGTGTTTTTCTATCTGTATTCTCACCCCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AYPPLLGSRDKQ*CFSICILTPSR Trigger: CCTGCTGGGGGTGAGAATACAGATAGAAAAACACAACTGTTTGTCTCTGCTTCCTAGCAAAGGTGGGTATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR TCA 90 bp | GAAACCTCAGGAAAGGAGGTTTTATTCTCCGGTGGCTCACTCTGTTTAACAGCTAAGTGGTTCACTTTCTaGGACACACAGAAGGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: ETSGKEVLFSGGSLCLTAKWFTF*DTQKGK Trigger: CTTACCCTTCTGTGTGTCTCAGAAAGTGAACCACTT...AGCTGTTAAACAGAGTGAGCCACCGGAGAATAAAACCTCCTTTCCTGAGGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR CAA 72 bp | GAGGCAAAGGGTCATGAGACTCATGCATACCCACCTTaGCTAGGAAGCAGAGACAAACAGTTGTGTTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: EAKGHETHAYPP*LGSRDKQLCFS Trigger: AGAAAAACACAACTGTTTGTCTCTGCTTCCTAGCAAAGGTGGGTATGCATGAGTCTCATGACCCTTTGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR CCA 90 bp | GGAATTAAAGGGAGAGTAAGTTCAGGGAAGGGCTCAAGGATCTCAGAAAGGGAAAACCAGCATAGGAAATaGGCTTCACTGGATCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: GIKGRVSSGKGSRISERENQHRK*ASLDLK Trigger: TTTTAGATCCAGTGAAGCCCATTTCCTATGCTGGTT...TTCCCTTTCTGAGATCCTTGAGCCCTTCCCTGAACTTACTCTCCCTTTAATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| 3UTR CAA 72 bp | CAGGAGATGGCAGCTCTCATTACAGTTCTCATATACTaGGCATTATCTGTCCTCAAGATTCCCAGAATTGCA | + |
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Preference number: 4 (lower is better) Translates to: QEMAALITVLIY*ALSVLKIPRIA Trigger: TGCAATTCTGGGAATCTTGAGGACAGATAATGCCAAGTATATGAGAACTGTAATGAGAGCTGCCATCTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR TCA 90 bp | ACTCCTTTTGTTATGTTGTGTTTCAGGACATCTGCAAACTGTGGAAATAAAGCAATAAGAGACCACAATTaGGGAGAATGGCCCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: TPFVMLCFRTSANCGNKAIRDHN*GEWPHK Trigger: CTTGTGGGGCCATTCTCCTCAATTGTGGTCTCTTAT...TGCTTTATTTCCACAGTTTGCAGATGTCCTGAAACACAACATAACAAAAGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR TCA 90 bp | ACTCCTTTTGTTATGTTGTGTTTCAGGACATCTGCAAACTGTGGAAATAAAGCAGAAAAGGCTTTCCTTTaGCCCTCTTCTGACTGGATC | + |
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Preference number: 4 (lower is better) Translates to: TPFVMLCFRTSANCGNKAEKAFL*PSSDWI Trigger: GATCCAGTCAGAAGAGGGTCAAAGGAAAGCCTTTTC...TGCTTTATTTCCACAGTTTGCAGATGTCCTGAAACACAACATAACAAAAGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR GCA 90 bp | TACATGGGAGCAGAGCATCATTCCATAAGGTGTCCTACTATAATTTTTATTAAGAAGTCACTGCCATGGTaGTGCAAACTCTCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: YMGAEHHSIRCPTIIFIKKSLPW*CKLSSS Trigger: TGAGCTGGAGAGTTTGCAGCACCATGGCAGTGACTT...CTTAATAAAAATTATAGTAGGACACCTTATGGAATGATGCTCTGCTCCCATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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| CDS-3UTR CCA 90 bp | TACATGGGAGCAGAGCATCATTCCATAAGGTGTCCTACTATAATTTTTATTAAGAAAAGTAACACGAGGTaGATCAAAGACAGCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: YMGAEHHSIRCPTIIFIKKSNTR*IKDSRT Trigger: TGTTCTGCTGTCTTTGATCCACCTCGTGTTACTTTT...CTTAATAAAAATTATAGTAGGACACCTTATGGAATGATGCTCTGCTCCCATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216179.2 |
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