Pregenerated sensors for OLFR1298 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000109487Ensembl transcript IDs: ENSMUST00000119566.4, ENSMUST00000208284.3
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGACCTTGGTCCTGAGAAGGCTCGATGCACCAGTAAAGGGGAATaGCAAGAGAGGGAATCAGGAGTGGGTGGATGGGTGAGCAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: EDLGPEKARCTSKGE*QERESGVGGWVSKE Trigger: TTCCTTGCTCACCCATCCACCCACTCCTGATTCCCTCTCTTGGCATTCCCCTTTACTGGTGCATCGAGCCTTCTCAGGACCAAGGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| 3UTR CCA 90 bp | ACCAGTAAAGGGGAATGCCAAGAGAGGGAATCAGGAGTGGGTGGATaGGTGAGCAAGGAAAGGGAGAATGGAATAGGAGGTTTTCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: TSKGECQERESGVGG*VSKERENGIGGFQR Trigger: CCTCTGAAAACCTCCTATTCCATTCTCCCTTTCCTTGCTCACCCATCCACCCACTCCTGATTCCCTCTCTTGGCATTCCCCTTTACTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| 3UTR-3UTR CCA 90 bp | CTCGATGCACCAGTAAAGGGGAATGCCAAGAGAGGGAATCAGGAGTGGGTGGATCAAGGAAAGGGAGAATaGAATAGGAGGTTTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LDAPVKGNAKRGNQEWVDQGKGE*NRRFSE Trigger: CTCTGAAAACCTCCTATTCCATTCTCCCTTTCCTTG...ATCCACCCACTCCTGATTCCCTCTCTTGGCATTCCCCTTTACTGGTGCATCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| 3UTR-3UTR CCA 90 bp | CATGGCATTCATTTGGGAAAGCATGTGTATTTATATTTCAGCTGTATAGGTAGAGGAATCAGGAGTGGGTaGATGGGTGAGCAAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: HGIHLGKHVYLYFSCIGRGIRSG*MGEQGK Trigger: CTTTCCTTGCTCACCCATCCACCCACTCCTGATTCC...TCTACCTATACAGCTGAAATATAAATACACATGCTTTCCCAAATGAATGCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| 3UTR GCA 72 bp | GGTCCTGAGAAGGCTCGATGCACCAGTAAAGGGGAATaGCAAGAGAGGGAATCAGGAGTGGGTGGATGGGTG | + |
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Preference number: 3 (lower is better) Translates to: GPEKARCTSKGE*QERESGVGGWV Trigger: CACCCATCCACCCACTCCTGATTCCCTCTCTTGGCATTCCCCTTTACTGGTGCATCGAGCCTTCTCAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| 3UTR GCA 72 bp | ATGAGAGGAGAGGACCTTGGTCCTGAGAAGGCTCGATaGACCAGTAAAGGGGAATGCCAAGAGAGGGAATCA | + |
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Preference number: 3 (lower is better) Translates to: MRGEDLGPEKAR*TSKGECQERES Trigger: TGATTCCCTCTCTTGGCATTCCCCTTTACTGGTGCATCGAGCCTTCTCAGGACCAAGGTCCTCTCCTCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| 3UTR CCA 72 bp | AGGAGTGGGTGGATGGGTGAGCAAGGAAAGGGAGAATaGAATAGGAGGTTTTCAGAGGCGAAATCAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: RSGWMGEQGKGE*NRRFSEAKSGK Trigger: CTTTCCTGATTTCGCCTCTGAAAACCTCCTATTCCATTCTCCCTTTCCTTGCTCACCCATCCACCCACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| CDS-3UTR GCA 90 bp | CTCGATGCACCAGTAAAGGGGAATGCCAAGAGAGGGAATCAGGAGTGGGTGGATCTGAGACATGCATCCTaGAAAGGAAATGGTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: LDAPVKGNAKRGNQEWVDLRHAS*KGNGLV Trigger: AACAAGACCATTTCCTTTGCAGGATGCATGTCTCAG...ATCCACCCACTCCTGATTCCCTCTCTTGGCATTCCCCTTTACTGGTGCATCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| CDS-3UTR CCA 90 bp | GATGCACCAGTAAAGGGGAATGCCAAGAGAGGGAATCAGGAGTGGGTGGATGGGAGACTTGAAGATTCTTaGAGTTGGAAAGTCCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: DAPVKGNAKRGNQEWVDGRLEDS*SWKVLR Trigger: TCTTAGGACTTTCCAACTCCAAGAATCTTCAAGTCT...CCCATCCACCCACTCCTGATTCCCTCTCTTGGCATTCCCCTTTACTGGTGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| CDS-3UTR CCA 90 bp | AAGGAAAGGGAGAATGGAATAGGAGGTTTTCAGAGGCGAAATCAGGAAAGGGGAAAAGTATTTAAATCATaGGAATCCATGCAGGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: KERENGIGGFQRRNQERGKVFKS*ESMQAS Trigger: GCTAGCCTGCATGGATTCCCATGATTTAAATACTTT...TCCCCTTTCCTGATTTCGCCTCTGAAAACCTCCTATTCCATTCTCCCTTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| CDS-3UTR TCA 90 bp | GTATCATGGCATTCATTTGGGAAAGCATGTGTATTTATATTTCAGCTGTATAGGCTTAGGAGTGGTGTTTaGGGAGAGCCACATGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: VSWHSFGKACVFIFQLYRLRSGV*GEPHVN Trigger: GTTGACATGTGGCTCTCCTCAAACACCACTCCTAAG...CCTATACAGCTGAAATATAAATACACATGCTTTCCCAAATGAATGCCATGATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| CDS-3UTR TCA 90 bp | CATGGCATTCATTTGGGAAAGCATGTGTATTTATATTTCAGCTGTATAGGTAGATGGGATAAAAAGACCTaGGACATGCATCCTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: HGIHLGKHVYLYFSCIGRWDKKT*DMHPAK Trigger: CTTTGCAGGATGCATGTCTCAGGTCTTTTTATCCCA...TCTACCTATACAGCTGAAATATAAATACACATGCTTTCCCAAATGAATGCCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| CDS-3UTR CCA 90 bp | CATGGCATTCATTTGGGAAAGCATGTGTATTTATATTTCAGCTGTATAGGTAGATTCTCAGTGTATAAATaGCTGGGTTTAGGAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: HGIHLGKHVYLYFSCIGRFSVYK*LGLGEV Trigger: CACCTCTCCTAAACCCAGCCATTTATACACTGAGAA...TCTACCTATACAGCTGAAATATAAATACACATGCTTTCCCAAATGAATGCCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| CDS-3UTR CAA 90 bp | GATGCACCAGTAAAGGGGAATGCCAAGAGAGGGAATCAGGAGTGGGTGGATGGGAATACAGCAAGAAACTaGTCCAACCAGGTGATACTG | + |
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Preference number: 5 (lower is better) Translates to: DAPVKGNAKRGNQEWVDGNTARN*SNQVIL Trigger: CAGTATCACCTGGTTGGACAAGTTTCTTGCTGTATT...CCCATCCACCCACTCCTGATTCCCTCTCTTGGCATTCCCCTTTACTGGTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| CDS TCA 90 bp | AGAAAGGAAGCTGCACAACCACTAAAAAGTAGCTTATACCATGTATaGATCCAATTGTCCAAGAAGTCAACACCAACCCAGTGCACCTCT | + |
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Preference number: 5 (lower is better) Translates to: RKEAAQPLKSSLYHV*IQLSKKSTPTQCTS Trigger: AGAGGTGCACTGGGTTGGTGTTGACTTCTTGGACAATTGGATTCATACATGGTATAAGCTACTTTTTAGTGGTTGTGCAGCTTCCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119566.4 ENSMUST00000208284.3 |
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| CDS-3UTR CAA 90 bp | CATGGCATTCATTTGGGAAAGCATGTGTATTTATATTTCAGCTGTATAGGTAGAGCAAAGGAAATGGTCTaGTTTTCGCTGAGAAAATCT | + |
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Preference number: 5 (lower is better) Translates to: HGIHLGKHVYLYFSCIGRAKEMV*FSLRKS Trigger: AGATTTTCTCAGCGAAAACAAGACCATTTCCTTTGC...TCTACCTATACAGCTGAAATATAAATACACATGCTTTCCCAAATGAATGCCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| CDS-3UTR CAA 90 bp | CATGGCATTCATTTGGGAAAGCATGTGTATTTATATTTCAGCTGTATAGGTAGAAAGAAACTATCTATTTaGTTGGGACCACAGAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: HGIHLGKHVYLYFSCIGRKKLSI*LGPQKG Trigger: TCCTTTCTGTGGTCCCAACAAAATAGATAGTTTCTT...TCTACCTATACAGCTGAAATATAAATACACATGCTTTCCCAAATGAATGCCATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208284.3 |
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| CDS TCA 72 bp | ATCTCTCCTCCAGCAATACAATGGGATAAAAAGACCTaGGACATGCATCCTGCAAAGGAAATGGTCTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: ISPPAIQWDKKT*DMHPAKEMVLF Trigger: AAACAAGACCATTTCCTTTGCAGGATGCATGTCTCAGGTCTTTTTATCCCATTGTATTGCTGGAGGAGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119566.4 ENSMUST00000208284.3 |
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