Pregenerated sensors for OLFR1297 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094858Ensembl transcript IDs: ENSMUST00000213398.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGCCCACTGGACCAGGAAATTCTTGGCCAAGCCCTGCTCACAAATaGCCAGATCTGGTCAGAGTCCTGACTCTCGTATTATTTTATTCA | + |
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Preference number: 1 (lower is better) Translates to: MPTGPGNSWPSPAHK*PDLVRVLTLVLFYS Trigger: TGAATAAAATAATACGAGAGTCAGGACTCTGACCAGATCTGGTCATTTGTGAGCAGGGCTTGGCCAAGAATTTCCTGGTCCAGTGGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CCA 90 bp | ACTCTCTCCCAAGGGTCTAGCCAAATAGAAAATCTAGAAAAGACATaGATTAACCAATGCTCATGCCCACTGGACCAGGAAATTCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: TLSQGSSQIENLEKT*INQCSCPLDQEILG Trigger: GCCAAGAATTTCCTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTATTTGGCTAGACCCTTGGGAGAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR TCA 90 bp | CTTGGCCAAGCCCTGCTCACAAATGACCAGATCTGGTCAGAGTCCTaGCTCTCGTATTATTTTATTCATCTTGCCCCATTAATATCATTA | + |
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Preference number: 1 (lower is better) Translates to: LGQALLTNDQIWSES*LSYYFIHLAPLISL Trigger: TAATGATATTAATGGGGCAAGATGAATAAAATAATACGAGAGTCAGGACTCTGACCAGATCTGGTCATTTGTGAGCAGGGCTTGGCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR TCA 90 bp | CCAGCATTGAGTAAGGCCATTGAATTCTTTTCATTCCCAGTGTCCTaGGCAACTTTTAGCACTGTGAATGGTATCAAACACAGGAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: PALSKAIEFFSFPVS*ATFSTVNGIKHRKD Trigger: ATCTTTCCTGTGTTTGATACCATTCACAGTGCTAAAAGTTGCTCAGGACACTGGGAATGAAAAGAATTCAATGGCCTTACTCAATGCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CCA 90 bp | ATAACCAGAAGCTGGAAACAACCCAGATGTCCCTCAGCAGAAAAATaGATGCAAAAAGTGTGGTACATTTACACAATGGAGTTCTACTCA | + |
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Preference number: 1 (lower is better) Translates to: ITRSWKQPRCPSAEK*MQKVWYIYTMEFYS Trigger: TGAGTAGAACTCCATTGTGTAAATGTACCACACTTTTTGCATCCATTTTTCTGCTGAGGGACATCTGGGTTGTTTCCAGCTTCTGGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR TCA 90 bp | TTGAATTCTTTTCATTCCCAGTGTCCTGAGCAACTTTTAGCACTGTaGATGGTATCAAACACAGGAAAGATCCTTAGTCAATTTGAGATT | + |
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Preference number: 1 (lower is better) Translates to: LNSFHSQCPEQLLAL*MVSNTGKILSQFEI Trigger: AATCTCAAATTGACTAAGGATCTTTCCTGTGTTTGATACCATTCACAGTGCTAAAAGTTGCTCAGGACACTGGGAATGAAAAGAATTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CAA 90 bp | CAGACATCAAACCCAAACACTATTGCTGATGCCAAAAAGTGTTTATaGACTGGAGCCTGGTATAGCTGTCTCCTGACAGGCTCTGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: QTSNPNTIADAKKCL*TGAWYSCLLTGSAS Trigger: GCTGGCAGAGCCTGTCAGGAGACAGCTATACCAGGCTCCAGTCAATAAACACTTTTTGGCATCAGCAATAGTGTTTGGGTTTGATGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAAAATCTAGAAAAGACATGGATTAACCAATGCTCATGCCCACTGGACCAGAGCCAACCATTGGACTaGGCATGGGGACCCCAATGG | + |
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Preference number: 2 (lower is better) Translates to: IENLEKTWINQCSCPLDQSQPLD*AWGPQW Trigger: CCATTGGGGTCCCCATGCTCAGTCCAATGGTTGGCT...CTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CAA 90 bp | ACACATGGAGGGATGCATAGCTCCAATTACATGTATAGCAGAGGATaGCATTATCTGGCATCAGTAAGAGGGGAAGCTCTTGATCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: THGGMHSSNYMYSRG*HYLASVRGEALDPG Trigger: CCCAGGATCAAGAGCTTCCCCTCTTACTGATGCCAGATAATGCAATCCTCTGCTATACATGTAATTGGAGCTATGCATCCCTCCATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAAAATCTAGAAAAGACATGGATTAACCAATGCTCATGCCCACTGGACCAGGGCTCTGCCAGCACCTaGCCAATACAGAGGCAGATA | + |
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Preference number: 2 (lower is better) Translates to: IENLEKTWINQCSCPLDQGSAST*PIQRQI Trigger: TATCTGCCTCTGTATTGGTCAGGTGCTGGCAGAGCC...CTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCTCAAAACAGTCACAGATCAAAAGCTCAAGTGACAGCAAATGCTGGCAAGCTTCTCCATTGCTGGTaGGATTGCAAACTGGTACAC | + |
|
Preference number: 2 (lower is better) Translates to: PPQNSHRSKAQVTANAGKLLHCW*DCKLVH Trigger: GTGTACCAGTTTGCAATCCCACCAGCAATGGAGAAG...CTTGCCAGCATTTGCTGTCACTTGAGCTTTTGATCTGTGACTGTTTTGAGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCTCAAAACAGTCACAGATCAAAAGCTCAAGTGACAGCAAATGCTGGCAAGGCACTTCTCCATTGCTaGTGGGATTGCAAACTGGTA | + |
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Preference number: 2 (lower is better) Translates to: PPQNSHRSKAQVTANAGKALLHC*WDCKLV Trigger: TACCAGTTTGCAATCCCACCAGCAATGGAGAAGTGC...CTTGCCAGCATTTGCTGTCACTTGAGCTTTTGATCTGTGACTGTTTTGAGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CAA 90 bp | AGTGACAGCAAATGCTGGCAAGGATGTGGAGAAAGCACTTCTCCATaGCTGGTGGGATTGCAAACTGGTACACCACTCTTGAAATCAATT | + |
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Preference number: 2 (lower is better) Translates to: SDSKCWQGCGESTSP*LVGLQTGTPLLKSI Trigger: AATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGCAATGGAGAAGTGCTTTCTCCACATCCTTGCCAGCATTTGCTGTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCTCAAAACAGTCACAGATCAAAAGCTCAAGTGACAGCAAATGCTGGCAAGGGTGGGATTGCAAACTaGTACACCACTCTTGAAATC | + |
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Preference number: 2 (lower is better) Translates to: PPQNSHRSKAQVTANAGKGGIAN*YTTLEI Trigger: GATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACC...CTTGCCAGCATTTGCTGTCACTTGAGCTTTTGATCTGTGACTGTTTTGAGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTGGGATTGCAAACTGGTACACCACTCTTGAAATCAATTTGGTGATTCTTGGAGTGTTAGATCAGTaGCACACAAATGGATGGGTG | + |
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Preference number: 2 (lower is better) Translates to: AGGIANWYTTLEINLVILGVLDQ*HTNGWV Trigger: CACCCATCCATTTGTGTGTCACTGATCTAACACTCC...AAGAATCACCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTTCAGAGAAGCCTTATTTATGATAACCAGAAGCTGGAAACAACCCAGATGGATAAAGCCAACCATTaGACTGAGCATGGGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: YVQRSLIYDNQKLETTQMDKANH*TEHGDP Trigger: GGGGTCCCCATGCTCAGTCCAATGGTTGGCTTTATC...CATCTGGGTTGTTTCCAGCTTCTGGTTATCATAAATAAGGCTTCTCTGAACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTTCAGAGAAGCCTTATTTATGATAACCAGAAGCTGGAAACAACCCAGATGAAGAGGGGAAGCTCTTaGTCCTGGGAGGCTAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: YVQRSLIYDNQKLETTQMKRGSS*SWEARK Trigger: TTTTCTAGCCTCCCAGGATCAAGAGCTTCCCCTCTT...CATCTGGGTTGTTTCCAGCTTCTGGTTATCATAAATAAGGCTTCTCTGAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAAAATCTAGAAAAGACATGGATTAACCAATGCTCATGCCCACTGGACCAGGATCAAAAGCTCAAGTaGCAGCAAATGCTGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: IENLEKTWINQCSCPLDQDQKLK*QQMLAR Trigger: CCTTGCCAGCATTTGCTGTCACTTGAGCTTTTGATC...CTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCTGGAAACAACCCAGATGTCCCTCAGCAGAAAAATGGATGCAAAAAGTGTGCAATTTCCAGCATTaGGTAAGGCCATTGAATTCT | + |
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Preference number: 2 (lower is better) Translates to: RSWKQPRCPSAEKWMQKVCNFQH*VRPLNS Trigger: AGAATTCAATGGCCTTACTCAATGCTGGAAATTGCA...CACTTTTTGCATCCATTTTTCTGCTGAGGGACATCTGGGTTGTTTCCAGCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR TCA 90 bp | CCACCTCAAAACAGTCACAGATCAAAAGCTCAAGTGACAGCAAATGCTGGCAAGGTACTCACTGATAATTaGATATTAGCTCAGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: PPQNSHRSKAQVTANAGKVLTDN*ILAQKL Trigger: GAGCTTCTGAGCTAATATTCAATTATCAGTGAGTAC...CTTGCCAGCATTTGCTGTCACTTGAGCTTTTGATCTGTGACTGTTTTGAGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGAAAATCTAGAAAAGACATGGATTAACCAATGCTCATGCCCACTGGACCAGCAGATCCATCCCATCTaGAGACATCAAACCCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: IENLEKTWINQCSCPLDQQIHPI*RHQTQT Trigger: TGTTTGGGTTTGATGTCTGCAGATGGGATGGATCTG...CTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCTGGAAACAACCCAGATGTCCCTCAGCAGAAAAATGGATGCAAAAAGTGGAGATAAGACAAGAGTaGTTATGTTGGTCATTTGGC | + |
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Preference number: 2 (lower is better) Translates to: RSWKQPRCPSAEKWMQKVEIRQE*LCWSFG Trigger: GCCAAATGACCAACATAACCACTCTTGTCTTATCTC...CACTTTTTGCATCCATTTTTCTGCTGAGGGACATCTGGGTTGTTTCCAGCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGAAAATCTAGAAAAGACATGGATTAACCAATGCTCATGCCCACTGGACCAGCAGATAAACCACTCCTaGGCATATACCCAAAAGATG | + |
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Preference number: 2 (lower is better) Translates to: IENLEKTWINQCSCPLDQQINHS*AYTQKM Trigger: CATCTTTTGGGTATATGCCCAGGAGTGGTTTATCTG...CTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAAAATCTAGAAAAGACATGGATTAACCAATGCTCATGCCCACTGGACCAGCATGGAAGTATATTTTaGTGGCATTCGTGTGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: IENLEKTWINQCSCPLDQHGSIF*WHSCVE Trigger: TTCCACACACGAATGCCATCAAAATATACTTCCATG...CTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTGGGATTGCAAACTGGTACACCACTCTTGAAATCAATTTGGTGATTCTTCCCAAACACTATTGCTaGTGCCAAAAAGTGTTTATT | + |
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Preference number: 2 (lower is better) Translates to: AGGIANWYTTLEINLVILPKHYC*CQKVFI Trigger: AATAAACACTTTTTGGCATCAGCAATAGTGTTTGGG...AAGAATCACCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGGTGGGATTGCAAACTGGTACACCACTCTTGAAATCAATTTGGTGATTCTTTCAACAAATTTACAATaGCCTGGCTTTCAGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: AGGIANWYTTLEINLVILSTNLQ*PGFQQR Trigger: TCTTTGCTGAAAGCCAGGGCATTGTAAATTTGTTGA...AAGAATCACCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTGGGATTGCAAACTGGTACACCACTCTTGAAATCAATTTGGTGATTCTTAGAAAGGCAAAAGTCTaGTCTGTTTTAGACACATCT | + |
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Preference number: 2 (lower is better) Translates to: AGGIANWYTTLEINLVILRKAKV*SVLDTS Trigger: AGATGTGTCTAAAACAGACCAGACTTTTGCCTTTCT...AAGAATCACCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTGGGATTGCAAACTGGTACACCACTCTTGAAATCAATTTGGTGATTCTTAAATTTACAATGCCCTaGCTTTCAGCAAAGATGACA | + |
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Preference number: 2 (lower is better) Translates to: AGGIANWYTTLEINLVILKFTMP*LSAKMT Trigger: TGTCATCTTTGCTGAAAGCCAGGGCATTGTAAATTT...AAGAATCACCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTGGGATTGCAAACTGGTACACCACTCTTGAAATCAATTTGGTGATTCTTTGGATGCAAAAAGTGTaGTACATTTACACAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: AGGIANWYTTLEINLVILWMQKV*YIYTME Trigger: CTCCATTGTGTAAATGTACCACACTTTTTGCATCCA...AAGAATCACCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGAAAATCTAGAAAAGACATGGATTAACCAATGCTCATGCCCACTGGACCAGAACAAAAGTGCACACTaGATTATTATACATGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: IENLEKTWINQCSCPLDQNKSAH*IIIHEL Trigger: GAGCTCATGTATAATAATCCAGTGTGCACTTTTGTT...CTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTTCAGAGAAGCCTTATTTATGATAACCAGAAGCTGGAAACAACCCAGATGTTTAAGATAGGAAACTaGGAAGGGGACAACATTAGA | + |
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Preference number: 2 (lower is better) Translates to: YVQRSLIYDNQKLETTQMFKIGN*EGDNIR Trigger: TCTAATGTTGTCCCCTTCCCAGTTTCCTATCTTAAA...CATCTGGGTTGTTTCCAGCTTCTGGTTATCATAAATAAGGCTTCTCTGAACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CCA 72 bp | CACCTGACCAATACAGAGGCAGATAAAGCCAACCATTaGACTGAGCATGGGGACCCCAATGGAAGAGCTAGG | + |
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Preference number: 3 (lower is better) Translates to: HLTNTEADKANH*TEHGDPNGRAR Trigger: CCTAGCTCTTCCATTGGGGTCCCCATGCTCAGTCCAATGGTTGGCTTTATCTGCCTCTGTATTGGTCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR TCA 72 bp | TGGTATAGCTGTCTCCTGACAGGCTCTGCCAGCACCTaGCCAATACAGAGGCAGATAAAGCCAACCATTGGA | + |
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Preference number: 3 (lower is better) Translates to: WYSCLLTGSAST*PIQRQIKPTIG Trigger: TCCAATGGTTGGCTTTATCTGCCTCTGTATTGGTCAGGTGCTGGCAGAGCCTGTCAGGAGACAGCTATACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR TCA 72 bp | GGACCAGGAAATTCTTGGCCAAGCCCTGCTCACAAATaGCCAGATCTGGTCAGAGTCCTGACTCTCGTATTA | + |
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Preference number: 3 (lower is better) Translates to: GPGNSWPSPAHK*PDLVRVLTLVL Trigger: TAATACGAGAGTCAGGACTCTGACCAGATCTGGTCATTTGTGAGCAGGGCTTGGCCAAGAATTTCCTGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CCA 72 bp | AGTGTTAGATCAGTGACACACAAATGGATGGGTGGATaGCGAAGGACCCTCAAAGAGGCAAAGGGGAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: SVRSVTHKWMGG*RRTLKEAKGKE Trigger: CTCTTTCCCCTTTGCCTCTTTGAGGGTCCTTCGCCATCCACCCATCCATTTGTGTGTCACTGATCTAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CCA 72 bp | ATTGCTGATGCCAAAAAGTGTTTATTGACTGGAGCCTaGTATAGCTGTCTCCTGACAGGCTCTGCCAGCACC | + |
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Preference number: 3 (lower is better) Translates to: IADAKKCLLTGA*YSCLLTGSAST Trigger: GGTGCTGGCAGAGCCTGTCAGGAGACAGCTATACCAGGCTCCAGTCAATAAACACTTTTTGGCATCAGCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR TCA 72 bp | ATTGCATTATCTGGCATCAGTAAGAGGGGAAGCTCTTaGTCCTGGGAGGCTAGAAAACCCAGCATAAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: IALSGISKRGSS*SWEARKPSIRE Trigger: CTCCCTTATGCTGGGTTTTCTAGCCTCCCAGGATCAAGAGCTTCCCCTCTTACTGATGCCAGATAATGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CAA 90 bp | CCACCTCAAAACAGTCACAGATCAAAAGCTCAAGTGACAGCAAATGCTGGCAAGGCCAAAAAGTGTTTATaGACTGGAGCCTGGTATAGC | + |
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Preference number: 3 (lower is better) Translates to: PPQNSHRSKAQVTANAGKAKKCL*TGAWYS Trigger: GCTATACCAGGCTCCAGTCAATAAACACTTTTTGGC...CTTGCCAGCATTTGCTGTCACTTGAGCTTTTGATCTGTGACTGTTTTGAGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGGTGGGATTGCAAACTGGTACACCACTCTTGAAATCAATTTGGTGATTCTTTCAGTAGATAGGAAGTaGAGGGATAGGGCTACCCAC | + |
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Preference number: 3 (lower is better) Translates to: AGGIANWYTTLEINLVILSVDRK*RDRATH Trigger: GTGGGTAGCCCTATCCCTCAACTTCCTATCTACTGA...AAGAATCACCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR GCA 72 bp | GAAAATCTAGAAAAGACATGGATTAACCAATGCTCATaGCCACTGGACCAGGAAATTCTTGGCCAAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: ENLEKTWINQCS*PLDQEILGQAL Trigger: CAGGGCTTGGCCAAGAATTTCCTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR TCA 72 bp | GCCCTGCTCACAAATGACCAGATCTGGTCAGAGTCCTaGCTCTCGTATTATTTTATTCATCTTGCCCCATTA | + |
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Preference number: 3 (lower is better) Translates to: ALLTNDQIWSES*LSYYFIHLAPL Trigger: TAATGGGGCAAGATGAATAAAATAATACGAGAGTCAGGACTCTGACCAGATCTGGTCATTTGTGAGCAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CAA 90 bp | CCACCTCAAAACAGTCACAGATCAAAAGCTCAAGTGACAGCAAATGCTGGCAAGACATGGAAGTATATTTaGATGGCATTCGTGTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: PPQNSHRSKAQVTANAGKTWKYI*MAFVCG Trigger: TCCACACACGAATGCCATCAAAATATACTTCCATGT...CTTGCCAGCATTTGCTGTCACTTGAGCTTTTGATCTGTGACTGTTTTGAGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CAA 90 bp | CCACCTCAAAACAGTCACAGATCAAAAGCTCAAGTGACAGCAAATGCTGGCAAGATGCAATTTCCAGCATaGAGTAAGGCCATTGAATTC | + |
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Preference number: 3 (lower is better) Translates to: PPQNSHRSKAQVTANAGKMQFPA*SKAIEF Trigger: GAATTCAATGGCCTTACTCAATGCTGGAAATTGCAT...CTTGCCAGCATTTGCTGTCACTTGAGCTTTTGATCTGTGACTGTTTTGAGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGAAAATCTAGAAAAGACATGGATTAACCAATGCTCATGCCCACTGGACCAGAAGAAGGGAGAGTTCTaGGAGGGAGAGATGATAAGG | + |
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Preference number: 3 (lower is better) Translates to: IENLEKTWINQCSCPLDQKKGEF*EGEMIR Trigger: CCTTATCATCTCTCCCTCCAAGAACTCTCCCTTCTT...CTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR TCA 72 bp | GGTAGAGGAGTGAACAGTTTAGGTATTATAGGCAACTaGACTTTTTCCTCAATGTGGGAAAGTACATGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GRGVNSLGIIGN*TFSSMWESTWP Trigger: GGGCCATGTACTTTCCCACATTGAGGAAAAAGTTCAGTTGCCTATAATACCTAAACTGTTCACTCCTCTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR GCA 72 bp | CTACAGCCAAATTTGTCTACAGTACTGGACACATCTTaGCAGGTAGCTCTGTATTTTCCCATGCAATTTCCA | + |
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Preference number: 3 (lower is better) Translates to: LQPNLSTVLDTS*QVALYFPMQFP Trigger: TGGAAATTGCATGGGAAAATACAGAGCTACCTGGCAAGATGTGTCCAGTACTGTAGACAAATTTGGCTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CCA 72 bp | CAAGGGTCTAGCCAAATAGAAAATCTAGAAAAGACATaGATTAACCAATGCTCATGCCCACTGGACCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: QGSSQIENLEKT*INQCSCPLDQE Trigger: TTCCTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTATTTGGCTAGACCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGAAAATCTAGAAAAGACATGGATTAACCAATGCTCATGCCCACTGGACCAGAGTACTGGACACATCTaGCCAGGTAGCTCTGTATTT | + |
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Preference number: 3 (lower is better) Translates to: IENLEKTWINQCSCPLDQSTGHI*PGSSVF Trigger: AAATACAGAGCTACCTGGCAAGATGTGTCCAGTACT...CTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGCTGGAAACAACCCAGATGTCCCTCAGCAGAAAAATGGATGCAAAAAGTGCAAACCCAAACACTATaGCTGATGCCAAAAAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: RSWKQPRCPSAEKWMQKVQTQTL*LMPKSV Trigger: AACACTTTTTGGCATCAGCAATAGTGTTTGGGTTTG...CACTTTTTGCATCCATTTTTCTGCTGAGGGACATCTGGGTTGTTTCCAGCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CCA 72 bp | AGAAAGCACTTCTCCATTGCTGGTGGGATTGCAAACTaGTACACCACTCTTGAAATCAATTTGGTGATTCTT | + |
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Preference number: 3 (lower is better) Translates to: RKHFSIAGGIAN*YTTLEINLVIL Trigger: AAGAATCACCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGCAATGGAGAAGTGCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR GCA 72 bp | CAAATAGAAAATCTAGAAAAGACATGGATTAACCAATaGTCATGCCCACTGGACCAGGAAATTCTTGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: QIENLEKTWINQ*SCPLDQEILGQ Trigger: TTGGCCAAGAATTTCCTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CCA 72 bp | TATTGTATTACAAACTCTAACAGGCACCAGTCCACATaGACAGATATGTTAAGAGACCTGCAGAATTCACCA | + |
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Preference number: 3 (lower is better) Translates to: YCITNSNRHQST*TDMLRDLQNSP Trigger: TGGTGAATTCTGCAGGTCTCTTAACATATCTGTCCATGTGGACTGGTGCCTGTTAGAGTTTGTAATACAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR-3UTR CAA 90 bp | TATGTTCAGAGAAGCCTTATTTATGATAACCAGAAGCTGGAAACAACCCAGATGATGTATAGCAGAGGATaGCATTATCTGGCATCAGTA | + |
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Preference number: 3 (lower is better) Translates to: YVQRSLIYDNQKLETTQMMYSRG*HYLASV Trigger: TACTGATGCCAGATAATGCAATCCTCTGCTATACAT...CATCTGGGTTGTTTCCAGCTTCTGGTTATCATAAATAAGGCTTCTCTGAACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR GCA 72 bp | GTCAGAGTCCTGACTCTCGTATTATTTTATTCATCTTaGCCCATTAATATCATTAAGCTCATAACCCAATCT | + |
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Preference number: 3 (lower is better) Translates to: VRVLTLVLFYSS*PINIIKLITQS Trigger: AGATTGGGTTATGAGCTTAATGATATTAATGGGGCAAGATGAATAAAATAATACGAGAGTCAGGACTCTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CCA 72 bp | AAAGAGTCTGGAATGCAGGGGTTTAAGATAGGAAACTaGGAAGGGGACAACATTAGAAATGTAAATAAATAT | + |
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Preference number: 3 (lower is better) Translates to: KESGMQGFKIGN*EGDNIRNVNKY Trigger: ATATTTATTTACATTTCTAATGTTGTCCCCTTCCCAGTTTCCTATCTTAAACCCCTGCATTCCAGACTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR TCA 72 bp | AGGAGGATCAGTGAGGAAATGATGAGATTAATTACTTaGGAGACTAGTACACAAAAGCATACACAAAATGAT | + |
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Preference number: 3 (lower is better) Translates to: RRISEEMMRLIT*ETSTQKHTQND Trigger: ATCATTTTGTGTATGCTTTTGTGTACTAGTCTCTCAAGTAATTAATCTCATCATTTCCTCACTGATCCTCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CAA 72 bp | AAATGCTGGCAAGGATGTGGAGAAAGCACTTCTCCATaGCTGGTGGGATTGCAAACTGGTACACCACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KCWQGCGESTSP*LVGLQTGTPLL Trigger: CAAGAGTGGTGTACCAGTTTGCAATCCCACCAGCAATGGAGAAGTGCTTTCTCCACATCCTTGCCAGCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| CDS-3UTR GCA 90 bp | GCTGGTGGGATTGCAAACTGGTACACCACTCTTGAAATCAATTTGGTGATTCTTTACCACTGTGATGTGTaGAGTGCATGTGGACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: AGGIANWYTTLEINLVILYHCDV*SACGQS Trigger: GCTCTGTCCACATGCACTGCACACATCACAGTGGTA...AAGAATCACCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CAA 72 bp | GGATGTGGAGAAAGCACTTCTCCATTGCTGGTGGGATaGCAAACTGGTACACCACTCTTGAAATCAATTTGG | + |
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Preference number: 4 (lower is better) Translates to: GCGESTSPLLVG*QTGTPLLKSIW Trigger: CCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGCAATGGAGAAGTGCTTTCTCCACATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| CDS-3UTR TCA 90 bp | GCTGGTGGGATTGCAAACTGGTACACCACTCTTGAAATCAATTTGGTGATTCTTCAATACCACCTCTCCTaGAGCAATGCAGTGGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: AGGIANWYTTLEINLVILQYHLS*SNAVGK Trigger: TTTTCCCACTGCATTGCTTCAGGAGAGGTGGTATTG...AAGAATCACCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| CDS-3UTR GCA 90 bp | TACAGTACTGGACACATCTTGCCAGGTAGCTCTGTATTTTCCCATGCAATTTCCCTGGGACATGCATCCTaGAAAGGAAATGGTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: YSTGHILPGSSVFSHAISLGHAS*KGNGLL Trigger: AAGAAGACCATTTCCTTTGCAGGATGCATGTCCCAG...GGAAATTGCATGGGAAAATACAGAGCTACCTGGCAAGATGTGTCCAGTACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CAA 72 bp | GGGATGCATAGCTCCAATTACATGTATAGCAGAGGATaGCATTATCTGGCATCAGTAAGAGGGGAAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GMHSSNYMYSRG*HYLASVRGEAL Trigger: AAGAGCTTCCCCTCTTACTGATGCCAGATAATGCAATCCTCTGCTATACATGTAATTGGAGCTATGCATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| CDS-3UTR TCA 90 bp | ATAGAAAATCTAGAAAAGACATGGATTAACCAATGCTCATGCCCACTGGACCAGAGATCATTACCACTGTaGTGTGTGCAGTGCATGTGG | + |
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Preference number: 4 (lower is better) Translates to: IENLEKTWINQCSCPLDQRSLPL*CVQCMW Trigger: CCACATGCACTGCACACATCACAGTGGTAATGATCT...CTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| CDS-3UTR TCA 90 bp | TACAGTACTGGACACATCTTGCCAGGTAGCTCTGTATTTTCCCATGCAATTTCCTTCTCAGTGTATAAATaGCTGGGTTTAGGAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: YSTGHILPGSSVFSHAISFSVYK*LGLGEV Trigger: CACCTCTCCTAAACCCAGTCATTTATACACTGAGAA...GGAAATTGCATGGGAAAATACAGAGCTACCTGGCAAGATGTGTCCAGTACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| CDS-3UTR CCA 90 bp | CCACCTCAAAACAGTCACAGATCAAAAGCTCAAGTGACAGCAAATGCTGGCAAGAAAGTATTTAAATCCTaGGAATCCATGCAGGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: PPQNSHRSKAQVTANAGKKVFKS*ESMQAS Trigger: GCTAGCCTGCATGGATTCCCAGGATTTAAATACTTT...CTTGCCAGCATTTGCTGTCACTTGAGCTTTTGATCTGTGACTGTTTTGAGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| CDS-3UTR CCA 90 bp | GCTGGTGGGATTGCAAACTGGTACACCACTCTTGAAATCAATTTGGTGATTCTTATGTGGACAGAGCCTTaGAAGCTCCAGTTTTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: AGGIANWYTTLEINLVILMWTEP*KLQFSN Trigger: ATTCGAAAACTGGAGCTTCCAAGGCTCTGTCCACAT...AAGAATCACCAAATTGATTTCAAGAGTGGTGTACCAGTTTGCAATCCCACCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CAA 72 bp | ACTACAGCCAAATTTGTCTACAGTACTGGACACATCTaGCCAGGTAGCTCTGTATTTTCCCATGCAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: TTAKFVYSTGHI*PGSSVFSHAIS Trigger: GGAAATTGCATGGGAAAATACAGAGCTACCTGGCAAGATGTGTCCAGTACTGTAGACAAATTTGGCTGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| 3UTR CAA 72 bp | GTGACATCCATAATTAATGTATTATCTGGTTCAGTATaGGTCAGGGTTACATACATGGAGATGAGCTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: VTSIINVLSGSV*VRVTYMEMSLA Trigger: TGCTAAGCTCATCTCCATGTATGTAACCCTGACCAATACTGAACCAGATAATACATTAATTATGGATGTCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| CDS-3UTR CAA 90 bp | ATAGAAAATCTAGAAAAGACATGGATTAACCAATGCTCATGCCCACTGGACCAGCATGTGGACAGAGCCTaGGAAGCTCCAGTTTTCGAA | + |
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Preference number: 5 (lower is better) Translates to: IENLEKTWINQCSCPLDQHVDRA*EAPVFE Trigger: TTCGAAAACTGGAGCTTCCAAGGCTCTGTCCACATG...CTGGTCCAGTGGGCATGAGCATTGGTTAATCCATGTCTTTTCTAGATTTTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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| CDS-3UTR CAA 90 bp | TACAGTACTGGACACATCTTGCCAGGTAGCTCTGTATTTTCCCATGCAATTTCCAACACAGCAAGAAATTaGTCCAACCAGGTGATATTT | + |
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Preference number: 5 (lower is better) Translates to: YSTGHILPGSSVFSHAISNTARN*SNQVIF Trigger: AAATATCACCTGGTTGGACAAATTTCTTGCTGTGTT...GGAAATTGCATGGGAAAATACAGAGCTACCTGGCAAGATGTGTCCAGTACTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213398.2 |
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