RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1290 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095809

Ensembl transcript IDs: ENSMUST00000099616.2, ENSMUST00000217611.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACACACATACATACAGAATATATTCCAACGTGCAATAAGGACACATaGTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAAC +
Preference number: 1 (lower is better)
Translates to: THIHTEYIPTCNKDT*STMFIAALFIIARN
Trigger: GTTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTATTGCACGTTGGAATATATTCTGTATGTATGTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
3UTR GCA 72 bp ACACACACACACATACATACAGAATATATTCCAACGTaGAATAAGGACACATGCTCCACTATGTTCATAGCA +
Preference number: 3 (lower is better)
Translates to: THTHIHTEYIPT*NKDTCSTMFIA
Trigger: TGCTATGAACATAGTGGAGCATGTGTCCTTATTGCACGTTGGAATATATTCTGTATGTATGTGTGTGTGTGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
3UTR CCA 72 bp GTTCCATCCACCAAGTGTATTTATATATGTAGTGGTTaGAGTTTTAGAGACATCTGCACCTTTACTGACCAA +
Preference number: 3 (lower is better)
Translates to: VPSTKCIYICSG*SFRDICTFTDQ
Trigger: TTGGTCAGTAAAGGTGCAGATGTCTCTAAAACTCCAACCACTACATATATAAATACACTTGGTGGATGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
CDS-3UTR CCA 90 bp GTTGGAGTTTTAGAGACATCTGCACCTTTACTGACCAACACCACCATATGTACATGGGCAAAGAAGACCTaGGACATGCATCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: VGVLETSAPLLTNTTICTWAKKT*DMHPAK
Trigger: CTTTGCAGGATGCATGTCCCAGGTCTTCTTTGCCCA...TGTACATATGGTGGTGTTGGTCAGTAAAGGTGCAGATGTCTCTAAAACTCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
CDS-3UTR CCA 90 bp GTTGGAGTTTTAGAGACATCTGCACCTTTACTGACCAACACCACCATATGTACACCTGCAGCAATACAATaGGCAAAGAAGACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VGVLETSAPLLTNTTICTPAAIQ*AKKTWD
Trigger: GTCCCAGGTCTTCTTTGCCCATTGTATTGCTGCAGG...TGTACATATGGTGGTGTTGGTCAGTAAAGGTGCAGATGTCTCTAAAACTCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
CDS-3UTR TCA 90 bp ACAGAATATATTCCAACGTGCAATAAGGACACATGCTCCACTATGTTCATAGCACAGTTGTCCAGGAAGTaGACACCAACCCAGTGCATC +
Preference number: 4 (lower is better)
Translates to: TEYIPTCNKDTCSTMFIAQLSRK*TPTQCI
Trigger: GATGCACTGGGTTGGTGTTCACTTCCTGGACAACTG...TGCTATGAACATAGTGGAGCATGTGTCCTTATTGCACGTTGGAATATATTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
CDS-3UTR TCA 90 bp GTGGTTGGAGTTTTAGAGACATCTGCACCTTTACTGACCAACACCACCATATGTCTATGCAAGCTAGCTTaGTTACCAATGGCATGTCAC +
Preference number: 4 (lower is better)
Translates to: VVGVLETSAPLLTNTTICLCKLA*LPMACH
Trigger: GTGACATGCCATTGGTAATCAAGCTAGCTTGCATAG...ACATATGGTGGTGTTGGTCAGTAAAGGTGCAGATGTCTCTAAAACTCCAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
CDS-3UTR GCA 90 bp GTGGTTGGAGTTTTAGAGACATCTGCACCTTTACTGACCAACACCACCATATGTCTGGGACATGCATCCTaGAAAGGAAATGGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VVGVLETSAPLLTNTTICLGHAS*KGNGLV
Trigger: AACAAGACCATTTCCTTTGCAGGATGCATGTCCCAG...ACATATGGTGGTGTTGGTCAGTAAAGGTGCAGATGTCTCTAAAACTCCAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
CDS-3UTR TCA 90 bp GTGGTTGGAGTTTTAGAGACATCTGCACCTTTACTGACCAACACCACCATATGTCTTAGGAGTAGTGACTaGGGAAAGCCACATATCAAT +
Preference number: 4 (lower is better)
Translates to: VVGVLETSAPLLTNTTICLRSSD*GKPHIN
Trigger: ATTGATATGTGGCTTTCCTCAGTCACTACTCCTAAG...ACATATGGTGGTGTTGGTCAGTAAAGGTGCAGATGTCTCTAAAACTCCAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
CDS-3UTR TCA 90 bp GTGGTTGGAGTTTTAGAGACATCTGCACCTTTACTGACCAACACCACCATATGTGCATTGAAAACACCATaGAGAGTAAGACTTCAATCC +
Preference number: 4 (lower is better)
Translates to: VVGVLETSAPLLTNTTICALKTP*RVRLQS
Trigger: GGATTGAAGTCTTACTCTTCATGGTGTTTTCAATGC...ACATATGGTGGTGTTGGTCAGTAAAGGTGCAGATGTCTCTAAAACTCCAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
CDS-3UTR TCA 90 bp ACAGAATATATTCCAACGTGCAATAAGGACACATGCTCCACTATGTTCATAGCAGAGGCCATACATAGATaGAGATGCAGGGCACAAAAA +
Preference number: 4 (lower is better)
Translates to: TEYIPTCNKDTCSTMFIAEAIHR*RCRAQK
Trigger: TTTTTGTGCCCTGCATCTTCATCTATGTATGGCCTC...TGCTATGAACATAGTGGAGCATGTGTCCTTATTGCACGTTGGAATATATTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
CDS-3UTR CCA 90 bp GTTGGAGTTTTAGAGACATCTGCACCTTTACTGACCAACACCACCATATGTACATTCTCAGAGTATAAATaGCTGGATTTAGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: VGVLETSAPLLTNTTICTFSEYK*LDLGEV
Trigger: CACCTCTCCTAAATCCAGCCATTTATACTCTGAGAA...TGTACATATGGTGGTGTTGGTCAGTAAAGGTGCAGATGTCTCTAAAACTCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
3UTR CAA 72 bp AACCACAAATTACAGCCTGCCAGTAAGAGAAGCTGTTaGAGCTTTGTTCCATCCACCAAGTGTATTTATATA +
Preference number: 4 (lower is better)
Translates to: NHKLQPASKRSC*SFVPSTKCIYI
Trigger: TATATAAATACACTTGGTGGATGGAACAAAGCTCAAACAGCTTCTCTTACTGGCAGGCTGTAATTTGTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217611.2
CDS GCA 72 bp CGTAATGTGGGCAGTGCATGTGTTCATTGCCTTAGATaGACCAGCTTTAGAGCTCTGACATACGGTGATAAG +
Preference number: 6 (lower is better)
Translates to: RNVGSACVHCLR*TSFRALTYGDK
Trigger: CTTATCACCGTATGTCAGAGCTCTAAAGCTGGTGCATCTAAGGCAATGAACACATGCACTGCCCACATTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099616.2
ENSMUST00000217611.2
CDS GCA 72 bp ATCATAAGCCATTATCACCAACAGCACCATCTCTCCTaGAGCAATACAATGGGCAAAGAAGACCTGGGACAT +
Preference number: 6 (lower is better)
Translates to: IISHYHQQHHLS*SNTMGKEDLGH
Trigger: ATGTCCCAGGTCTTCTTTGCCCATTGTATTGCTGCAGGAGAGATGGTGCTGTTGGTGATAATGGCTTATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099616.2
ENSMUST00000217611.2
CDS CCA 72 bp ATCTCTCCTGCAGCAATACAATGGGCAAAGAAGACCTaGGACATGCATCCTGCAAAGGAAATGGTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: ISPAAIQWAKKT*DMHPAKEMVLF
Trigger: AAACAAGACCATTTCCTTTGCAGGATGCATGTCCCAGGTCTTCTTTGCCCATTGTATTGCTGCAGGAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099616.2
ENSMUST00000217611.2