Pregenerated sensors for OLFR1289 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061195Ensembl transcript IDs: ENSMUST00000120021.5
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TCCAGGAAGTCTCAGTTGTACTCAAATAGCACCGTAATAATACTTTTAATTGTCGAAGCCAATTGCCCATaGAGTAGCCACAATGCTAAC | + |
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Preference number: 4 (lower is better) Translates to: SRKSQLYSNSTVIILLIVEANCP*SSHNAN Trigger: GTTAGCATTGTGGCTACTGCATGGGCAATTGGCTTC...GACAATTAAAAGTATTATTACGGTGCTATTTGAGTACAACTGAGACTTCCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120021.5 |
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| CDS-3UTR CCA 90 bp | TCCAGGAAGTCTCAGTTGTACTCAAATAGCACCGTAATAATACTTTTAATTGTCATAGGCGAATGGAGGTaGGAGTCATTGGTCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: SRKSQLYSNSTVIILLIVIGEWR*ESLVTV Trigger: AACTGTGACCAATGACTCCCACCTCCATTCGCCTAT...GACAATTAAAAGTATTATTACGGTGCTATTTGAGTACAACTGAGACTTCCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120021.5 |
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| CDS-3UTR CCA 90 bp | TCCAGGAAGTCTCAGTTGTACTCAAATAGCACCGTAATAATACTTTTAATTGTCATCAGCAATAGTCTTTaGAGCTGTGACAGAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: SRKSQLYSNSTVIILLIVISNSL*SCDRGH Trigger: GTGTCCTCTGTCACAGCTCCAAAGACTATTGCTGAT...GACAATTAAAAGTATTATTACGGTGCTATTTGAGTACAACTGAGACTTCCTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120021.5 |
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| CDS-3UTR CCA 90 bp | TCCAGGAAGTCTCAGTTGTACTCAAATAGCACCGTAATAATACTTTTAATTGTCATAGCAAAGGCCAATTaGCTCACTGAGTGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKSQLYSNSTVIILLIVIAKAN*LTECRK Trigger: CTTCCTACACTCAGTGAGCCAATTGGCCTTTGCTAT...GACAATTAAAAGTATTATTACGGTGCTATTTGAGTACAACTGAGACTTCCTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120021.5 |
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| CDS-3UTR TCA 90 bp | TCCAGGAAGTCTCAGTTGTACTCAAATAGCACCGTAATAATACTTTTAATTGTCGTTTCCCATGTTGATTaGTTCCAGAAGAGAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKSQLYSNSTVIILLIVVSHVD*FQKRVS Trigger: AGAGACTCTCTTCTGGAATCAATCAACATGGGAAAC...GACAATTAAAAGTATTATTACGGTGCTATTTGAGTACAACTGAGACTTCCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120021.5 |
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| CDS-3UTR TCA 90 bp | TCCAGGAAGTCTCAGTTGTACTCAAATAGCACCGTAATAATACTTTTAATTGTCAGAACTACTGTGATATaGGCAGTCAGTGTAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRKSQLYSNSTVIILLIVRTTVI*AVSVDR Trigger: TCTGTCTACACTGACTGCTCATATCACAGTAGTTCT...GACAATTAAAAGTATTATTACGGTGCTATTTGAGTACAACTGAGACTTCCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120021.5 |
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| CDS-3UTR CCA 90 bp | TCCAGGAAGTCTCAGTTGTACTCAAATAGCACCGTAATAATACTTTTAATTGTCATCTATCAAAGGCCATaGCTACAAGGGTTACCATCT | + |
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Preference number: 4 (lower is better) Translates to: SRKSQLYSNSTVIILLIVIYQRP*LQGLPS Trigger: AGATGGTAACCCTTGTAGCCATGGCCTTTGATAGAT...GACAATTAAAAGTATTATTACGGTGCTATTTGAGTACAACTGAGACTTCCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120021.5 |
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| CDS-3UTR TCA 90 bp | TCCAGGAAGTCTCAGTTGTACTCAAATAGCACCGTAATAATACTTTTAATTGTCTCAGTCACCACAGAATaGTTTGTTTCCCATGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRKSQLYSNSTVIILLIVSVTTE*FVSHVD Trigger: ATCAACATGGGAAACAAATCATTCTGTGGTGACTGA...GACAATTAAAAGTATTATTACGGTGCTATTTGAGTACAACTGAGACTTCCTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120021.5 |
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| CDS-3UTR CAA 90 bp | TCCAGGAAGTCTCAGTTGTACTCAAATAGCACCGTAATAATACTTTTAATTGTCGTGAAGGAGGAATATTaGTGTAAAGCAGCCCTTAAC | + |
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Preference number: 5 (lower is better) Translates to: SRKSQLYSNSTVIILLIVVKEEY*CKAALN Trigger: GTTAAGGGCTGCTTTACACAAATATTCCTCCTTCAC...GACAATTAAAAGTATTATTACGGTGCTATTTGAGTACAACTGAGACTTCCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120021.5 |
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| CDS-3UTR CAA 90 bp | TCCAGGAAGTCTCAGTTGTACTCAAATAGCACCGTAATAATACTTTTAATTGTCTCACCACAGAATGATTaGTTTCCCATGTTGATTGAT | + |
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Preference number: 5 (lower is better) Translates to: SRKSQLYSNSTVIILLIVSPQND*FPMLID Trigger: ATCAATCAACATGGGAAACAAATCATTCTGTGGTGA...GACAATTAAAAGTATTATTACGGTGCTATTTGAGTACAACTGAGACTTCCTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120021.5 |
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