Pregenerated sensors for OLFR1286 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096703Ensembl transcript IDs: ENSMUST00000099617.2, ENSMUST00000184954.4, ENSMUST00000213210.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACACCTCACGCACACCTCACTCTCTTCTTACTCGCTCTCTACTTaGTCCACACTTGCTCGCGCTTCAATGCTCTCTCTCCTTTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: AHLTHTSLSSYSLST*STLARASMLSLLSL Trigger: AAGAGAAAGGAGAGAGAGCATTGAAGCGCGAGCAAGTGTGGAGCAAGTAGAGAGCGAGTAAGAAGAGAGTGAGGTGTGCGTGAGGTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTAACTGGAAATaGCATAGGCCTTTGATCACTCAAAGTCTACCCCTAATGATACCT | + |
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Preference number: 1 (lower is better) Translates to: RERERERERERVNWK*HRPLITQSLPLMIP Trigger: AGGTATCATTAGGGGTAGACTTTGAGTGATCAAAGGCCTATGTCATTTCCAGTTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213210.2 |
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| 3UTR GCA 90 bp | TCTCTCTCTTCCTCTCTCTCACGTATATTGAGGCTGCACATACTCTaGATTCTCTTGAATACTCTGCTTTTCTCCTCTGTGCTTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: SLSSSLSRILRLHIL*ILLNTLLFSSVLFF Trigger: AAAGAAAAGCACAGAGGAGAAAAGCAGAGTATTCAAGAGAATGCAGAGTATGTGCAGCCTCAATATACGTGAGAGAGAGGAAGAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR CCA 90 bp | CAGCCTCAACATAGATCAGAGTTCTCAACTGGAAGCAGGGATATCTaGAAGGCACATAATAAACAGATACAGACTACTATTCGGGTACAA | + |
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Preference number: 1 (lower is better) Translates to: QPQHRSEFSTGSRDI*KAHNKQIQTTIRVQ Trigger: TTGTACCCGAATAGTAGTCTGTATCTGTTTATTATGTGCCTTCCAGATATCCCTGCTTCCAGTTGAGAACTCTGATCTATGTTGAGGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR CCA 90 bp | AACCAAGTTGTGGAAGTTGCATTTTTCTTCCTACAATGTGGGTTTTaGGTATTTACAACAGACCCTCTGGCTTGGCAGCAAGCTTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: NQVVEVAFFFLQCGF*VFTTDPLAWQQASL Trigger: TAAAGAAGCTTGCTGCCAAGCCAGAGGGTCTGTTGTAAATACCCAAAACCCACATTGTAGGAAGAAAAATGCAACTTCCACAACTTGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTTCCTACAATGTGGGTTTTGGGTATTTACAACAGACCCTCTGGCTTGGCTTGCTCGCGCTTCAATaGTCTCTCTCCTTTCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: FSSYNVGFGYLQQTLWLGLLALQ*SLSFLL Trigger: CAAGAGAAAGGAGAGAGAGCATTGAAGCGCGAGCAA...GCCAAGCCAGAGGGTCTGTTGTAAATACCCAAAACCCACATTGTAGGAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR GCA 90 bp | GCGCTTCAATGCTCTCTCTCCTTTCTCTTGCCCCAGTCTTTTATTGATACTCCAGTTCAACTAGCTTTCTaGTTCTTCACATTGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: ALQCSLSFLLPQSFIDTPVQLAF*FFTLGT Trigger: TGTGCCCAATGTGAAGAAGCAGAAAGCTAGTTGAAC...TGGAGTATCAATAAAAGACTGGGGCAAGAGAAAGGAGAGAGAGCATTGAAGCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTCCAGTTCACTCACACAATATTCTTCACATACACCCTACACACACTCTCTTGCTCGCGCTTCAATaGTCTCTCTCCTTTCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: VFPVHSHNILHIHPTHTLLLALQ*SLSFLL Trigger: CAAGAGAAAGGAGAGAGAGCATTGAAGCGCGAGCAA...GAGAGTGTGTGTAGGGTGTATGTGAAGAATATTGTGTGAGTGAACTGGAAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGTCCAGCCTCAACATAGATCAGAGTTCTCAACTGGAAGCAGGGATATCTAAAGCTGTCAGGCAGTaGCCAGAAAGAATCAATTTA | + |
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Preference number: 2 (lower is better) Translates to: SGSSLNIDQSSQLEAGISKAVRQ*PERINL Trigger: TAAATTGATTCTTTCTGGCCACTGCCTGACAGCTTT...AGATATCCCTGCTTCCAGTTGAGAACTCTGATCTATGTTGAGGCTGGACCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCTCATGCACACCTCACGCACACCTCACTCTCTTCTTACTCGCTCTCTACTCACAGACTTGCAAGTTaGTTTATTATTTTCTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: SSHAHLTHTSLSSYSLSTHRLAS*FIIFSS Trigger: GCTAGAGAAAATAATAAACCAACTTGCAAGTCTGTG...AGTAGAGAGCGAGTAAGAAGAGAGTGAGGTGTGCGTGAGGTGTGCATGAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR CAA 90 bp | AAACCAAGTTGTGGAAGTTGCATTTTTCTTCCTACAATGTGGGTTTaGGGTATTTACAACAGACCCTCTGGCTTGGCAGCAAGCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: KPSCGSCIFLPTMWV*GIYNRPSGLAASFF Trigger: AAAGAAGCTTGCTGCCAAGCCAGAGGGTCTGTTGTAAATACCCAAAACCCACATTGTAGGAAGAAAAATGCAACTTCCACAACTTGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR GCA 90 bp | GATCAGAGTTCTCAACTGGAAGCAGGGATATCTGGAAGGCACATAATAAACAGAGTTCAACTAGCTTTCTaGTTCTTCACATTGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: DQSSQLEAGISGRHIINRVQLAF*FFTLGT Trigger: TGTGCCCAATGTGAAGAAGCAGAAAGCTAGTTGAAC...TCTGTTTATTATGTGCCTTCCAGATATCCCTGCTTCCAGTTGAGAACTCTGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR CCA 90 bp | GATCAGAGTTCTCAACTGGAAGCAGGGATATCTGGAAGGCACATAATAAACAGAAAAGCTGTCAGGCAGTaGCCAGAAAGAATCAATTTA | + |
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Preference number: 2 (lower is better) Translates to: DQSSQLEAGISGRHIINRKAVRQ*PERINL Trigger: TAAATTGATTCTTTCTGGCCACTGCCTGACAGCTTT...TCTGTTTATTATGTGCCTTCCAGATATCCCTGCTTCCAGTTGAGAACTCTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTCCAGTTCACTCACACAATATTCTTCACATACACCCTACACACACTCTCCACAGACTTGCAAGTTaGTTTATTATTTTCTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: VFPVHSHNILHIHPTHTLHRLAS*FIIFSS Trigger: GCTAGAGAAAATAATAAACCAACTTGCAAGTCTGTG...GAGAGTGTGTGTAGGGTGTATGTGAAGAATATTGTGTGAGTGAACTGGAAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR GCA 72 bp | ACGCACACCTCACTCTCTTCTTACTCGCTCTCTACTTaGTCCACACTTGCTCGCGCTTCAATGCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: THTSLSSYSLST*STLARASMLSL Trigger: GAGAGAGAGCATTGAAGCGCGAGCAAGTGTGGAGCAAGTAGAGAGCGAGTAAGAAGAGAGTGAGGTGTGCGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR GCA 72 bp | CGCTCTCTACTTGCTCCACACTTGCTCGCGCTTCAATaGTCTCTCTCCTTTCTCTTGCCCCAGTCTTTTATT | + |
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Preference number: 3 (lower is better) Translates to: RSLLAPHLLALQ*SLSFLLPQSFI Trigger: AATAAAAGACTGGGGCAAGAGAAAGGAGAGAGAGCATTGAAGCGCGAGCAAGTGTGGAGCAAGTAGAGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR GCA 72 bp | ACTCTCTTCTTACTCGCTCTCTACTTGCTCCACACTTaGTCGCGCTTCAATGCTCTCTCTCCTTTCTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: TLFLLALYLLHT*SRFNALSPFSC Trigger: GCAAGAGAAAGGAGAGAGAGCATTGAAGCGCGAGCAAGTGTGGAGCAAGTAGAGAGCGAGTAAGAAGAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR CCA 72 bp | TGTGGGTTTTGGGTATTTACAACAGACCCTCTGGCTTaGCAGCAAGCTTCTTTATTTTCAGGGTCCAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: CGFWVFTTDPLA*QQASLFSGSSL Trigger: GAGGCTGGACCCTGAAAATAAAGAAGCTTGCTGCCAAGCCAGAGGGTCTGTTGTAAATACCCAAAACCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR GCA 72 bp | ACATTCTCATGTTCTACTCACTCTACACTCATCTCATaGACACCTCACGCACACCTCACTCTCTTCTTACTC | + |
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Preference number: 3 (lower is better) Translates to: TFSCSTHSTLIS*TPHAHLTLFLL Trigger: GAGTAAGAAGAGAGTGAGGTGTGCGTGAGGTGTGCATGAGATGAGTGTAGAGTGAGTAGAACATGAGAATGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR TCA 72 bp | GAGAGAGAGAGAGAGAGAGAGAGAGTTAACTGGAAATaGCATAGGCCTTTGATCACTCAAAGTCTACCCCTA | + |
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Preference number: 3 (lower is better) Translates to: ERERERERVNWK*HRPLITQSLPL Trigger: TAGGGGTAGACTTTGAGTGATCAAAGGCCTATGTCATTTCCAGTTAACTCTCTCTCTCTCTCTCTCTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213210.2 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTTCCTACAATGTGGGTTTTGGGTATTTACAACAGACCCTCTGGCTTGGCTCTGAGGTCATCTACTaGCATTTTCCTATAAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: FSSYNVGFGYLQQTLWLGSEVIY*HFPIKH Trigger: ATGCTTTATAGGAAAATGCAAGTAGATGACCTCAGA...GCCAAGCCAGAGGGTCTGTTGTAAATACCCAAAACCCACATTGTAGGAAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR CAA 90 bp | ACATATCAGGTTCTCTCTTCATTCACTCTTCACATTCTCATGTTCTACTCACTCTCTCTCTCCTTTCTCTaGCCCCAGTCTTTTATTGAT | + |
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Preference number: 3 (lower is better) Translates to: TYQVLSSFTLHILMFYSLSLSFL*PQSFID Trigger: ATCAATAAAAGACTGGGGCAAGAGAAAGGAGAGAGA...GAGTGAGTAGAACATGAGAATGTGAAGAGTGAATGAAGAGAGAACCTGATATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR CAA 90 bp | GTCCTTCAGAGACATAAAGAAACCTCTCAATTTTCACAACCAACAAAACCAAGTCCTACAATGTGGGTTTaGGGTATTTACAACAGACCC | + |
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Preference number: 3 (lower is better) Translates to: VLQRHKETSQFSQPTKPSPTMWV*GIYNRP Trigger: GGGTCTGTTGTAAATACCCAAAACCCACATTGTAGG...ACTTGGTTTTGTTGGTTGTGAAAATTGAGAGGTTTCTTTATGTCTCTGAAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTGGAAGTTGCATTTTTCTTCCTACAATGTGGGTTTTGGGTATTTACAACAGTCTCTCTCCTTTCTCTaGCCCCAGTCTTTTATTGAT | + |
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Preference number: 3 (lower is better) Translates to: LWKLHFSSYNVGFGYLQQSLSFL*PQSFID Trigger: ATCAATAAAAGACTGGGGCAAGAGAAAGGAGAGAGA...CTGTTGTAAATACCCAAAACCCACATTGTAGGAAGAAAAATGCAACTTCCACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR GCA 72 bp | AATTTAACCCTTAACTCAGCAGTTCAACTAGCTTTCTaGTTCTTCACATTGGGCACAATGACTCTCTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: NLTLNSAVQLAF*FFTLGTMTLLR Trigger: TCTTAAGAGAGTCATTGTGCCCAATGTGAAGAAGCAGAAAGCTAGTTGAACTGCTGAGTTAAGGGTTAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR CCA 72 bp | CATAGATCAGAGTTCTCAACTGGAAGCAGGGATATCTaGAAGGCACATAATAAACAGATACAGACTACTATT | + |
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Preference number: 3 (lower is better) Translates to: HRSEFSTGSRDI*KAHNKQIQTTI Trigger: AATAGTAGTCTGTATCTGTTTATTATGTGCCTTCCAGATATCCCTGCTTCCAGTTGAGAACTCTGATCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTTGCATTTTTCTTCCTACAATGTGGGTTTTGGGTATTTACAACAGACCCTCTCTGAGGTCATCTACTaGCATTTTCCTATAAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: KLHFSSYNVGFGYLQQTLSEVIY*HFPIKH Trigger: ATGCTTTATAGGAAAATGCAAGTAGATGACCTCAGA...GAGGGTCTGTTGTAAATACCCAAAACCCACATTGTAGGAAGAAAAATGCAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| 3UTR CAA 72 bp | CACTCTCTTCTTACTCGCTCTCTACTTGCTCCACACTaGCTCGCGCTTCAATGCTCTCTCTCCTTTCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: HSLLTRSLLAPH*LALQCSLSFLL Trigger: CAAGAGAAAGGAGAGAGAGCATTGAAGCGCGAGCAAGTGTGGAGCAAGTAGAGAGCGAGTAAGAAGAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR GCA 90 bp | GCGCTTCAATGCTCTCTCTCCTTTCTCTTGCCCCAGTCTTTTATTGATACTCCACCTCCTGCAAAGAAGTaGACACAGACGATCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: ALQCSLSFLLPQSFIDTPPPAKK*TQTIWL Trigger: GAGCCAGATCGTCTGTGTGCACTTCTTTGCAGGAGG...TGGAGTATCAATAAAAGACTGGGGCAAGAGAAAGGAGAGAGAGCATTGAAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR TCA 90 bp | TCATCTCATGCACACCTCACGCACACCTCACTCTCTTCTTACTCGCTCTCTACTGAGAGGTGTGATGACTaGGTAAAATACAGCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SSHAHLTHTSLSSYSLSTERCDD*VKYSQK Trigger: TTTCTGGCTGTATTTTACTCAGTCATCACACCTCTC...AGTAGAGAGCGAGTAAGAAGAGAGTGAGGTGTGCGTGAGGTGTGCATGAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR TCA 90 bp | ACTCTACACTCATCTCATGCACACCTCACGCACACCTCACTCTCTTCTTACTCGGAGAGGTGTGATGACTaGGTAAAATACAGCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: TLHSSHAHLTHTSLSSYSERCDD*VKYSQK Trigger: TTTCTGGCTGTATTTTACTCAGTCATCACACCTCTC...CGAGTAAGAAGAGAGTGAGGTGTGCGTGAGGTGTGCATGAGATGAGTGTAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR GCA 90 bp | GTGTTTCCAGTTCACTCACACAATATTCTTCACATACACCCTACACACACTCTCCCTCCTGCAAAGAAGTaGACACAGACGATCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VFPVHSHNILHIHPTHTLPPAKK*TQTIWL Trigger: GAGCCAGATCGTCTGTGTGCACTTCTTTGCAGGAGG...GAGAGTGTGTGTAGGGTGTATGTGAAGAATATTGTGTGAGTGAACTGGAAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTTCCTACAATGTGGGTTTTGGGTATTTACAACAGACCCTCTGGCTTGGCCAGTGTGTAGATGGCTaGATTCAGGAGAGGTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: FSSYNVGFGYLQQTLWLGQCVDG*IQERCD Trigger: ATCACACCTCTCCTGAATCCAGCCATCTACACACTG...GCCAAGCCAGAGGGTCTGTTGTAAATACCCAAAACCCACATTGTAGGAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTTCCTACAATGTGGGTTTTGGGTATTTACAACAGACCCTCTGGCTTGGCCCATCAGGTAGAGGATaGAAAATGGCAGTAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FSSYNVGFGYLQQTLWLGPSGRG*KMAVRG Trigger: TCCTCTTACTGCCATTTTCCATCCTCTACCTGATGG...GCCAAGCCAGAGGGTCTGTTGTAAATACCCAAAACCCACATTGTAGGAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR CCA 90 bp | TCAGGGTCCAGCCTCAACATAGATCAGAGTTCTCAACTGGAAGCAGGGATATCTAAATCCAACAATCCATaGAATCACAAGGAACCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SGSSLNIDQSSQLEAGISKSNNP*NHKEPD Trigger: ATCTGGTTCCTTGTGATTCCATGGATTGTTGGATTT...AGATATCCCTGCTTCCAGTTGAGAACTCTGATCTATGTTGAGGCTGGACCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR CCA 90 bp | GCGCTTCAATGCTCTCTCTCCTTTCTCTTGCCCCAGTCTTTTATTGATACTCCAAAATCCAACAATCCATaGAATCACAAGGAACCAGAT | + |
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Preference number: 4 (lower is better) Translates to: ALQCSLSFLLPQSFIDTPKSNNP*NHKEPD Trigger: ATCTGGTTCCTTGTGATTCCATGGATTGTTGGATTT...TGGAGTATCAATAAAAGACTGGGGCAAGAGAAAGGAGAGAGAGCATTGAAGCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR CCA 90 bp | GTCCTTCAGAGACATAAAGAAACCTCTCAATTTTCACAACCAACAAAACCAAGTCCATCAGGTAGAGGATaGAAAATGGCAGTAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VLQRHKETSQFSQPTKPSPSGRG*KMAVRG Trigger: TCCTCTTACTGCCATTTTCCATCCTCTACCTGATGG...ACTTGGTTTTGTTGGTTGTGAAAATTGAGAGGTTTCTTTATGTCTCTGAAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR CAA 90 bp | TATTCAAACCACATTCCAGCAGCTGGGTGTGACAGTCTCTGGCAGTATCATAATATCACAACAAACAGGTaGCCTACCACAGCCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: YSNHIPAAGCDSLWQYHNITTNR*PTTAIR Trigger: CCTGATGGCTGTGGTAGGCAACCTGTTTGTTGTGAT...ATTATGATACTGCCAGAGACTGTCACACCCAGCTGCTGGAATGTGGTTTGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS CCA 90 bp | ATATCACAACAAACAGGTTGCCTACCACAGCCATCAGGTAGAGGATaGAAAATGGCAGTAAGAGGAAGATCTCAAGTTGCCTTGAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: ISQQTGCLPQPSGRG*KMAVRGRSQVALRN Trigger: GTTCCTCAAGGCAACTTGAGATCTTCCTCTTACTGCCATTTTCCATCCTCTACCTGATGGCTGTGGTAGGCAACCTGTTTGTTGTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099617.2 ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR CAA 90 bp | ACATACACCCTACACACACTCTCCACACACACATATCAGGTTCTCTCTTCATTCAGATCTCAAGTTGCCTaGAGGAACACAGTCCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: TYTLHTLSTHTYQVLSSFRSQVA*RNTVPE Trigger: TTCAGGGACTGTGTTCCTCAAGGCAACTTGAGATCT...GAATGAAGAGAGAACCTGATATGTGTGTGTGGAGAGTGTGTGTAGGGTGTATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS CCA 90 bp | AATCAAGAGCATCTGACTAATGGCATGCACAAATCCAACAATCCATaGAATCACAAGGAACCAGATGCACTTCTGTCTGTCCATGATGCT | + |
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Preference number: 5 (lower is better) Translates to: NQEHLTNGMHKSNNP*NHKEPDALLSVHDA Trigger: AGCATCATGGACAGACAGAAGTGCATCTGGTTCCTTGTGATTCCATGGATTGTTGGATTTGTGCATGCCATTAGTCAGATGCTCTTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099617.2 ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR CAA 90 bp | AAGTTGCATTTTTCTTCCTACAATGTGGGTTTTGGGTATTTACAACAGACCCTCATCACAACAAACAGGTaGCCTACCACAGCCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: KLHFSSYNVGFGYLQQTLITTNR*PTTAIR Trigger: CCTGATGGCTGTGGTAGGCAACCTGTTTGTTGTGAT...GAGGGTCTGTTGTAAATACCCAAAACCCACATTGTAGGAAGAAAAATGCAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS-3UTR CAA 90 bp | GTCCTTCAGAGACATAAAGAAACCTCTCAATTTTCACAACCAACAAAACCAAGTAGATCTCAAGTTGCCTaGAGGAACACAGTCCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: VLQRHKETSQFSQPTKPSRSQVA*RNTVPE Trigger: TTCAGGGACTGTGTTCCTCAAGGCAACTTGAGATCT...ACTTGGTTTTGTTGGTTGTGAAAATTGAGAGGTTTCTTTATGTCTCTGAAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184954.4 ENSMUST00000213210.2 |
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| CDS CCA 72 bp | ATCTCACCTCCTGCAAAGAAGTGCACACAGACGATCTaGCTCATACACCCTACAAAGGAAATGGTTTTATTT | + |
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Preference number: 6 (lower is better) Translates to: ISPPAKKCTQTI*LIHPTKEMVLF Trigger: AAATAAAACCATTTCCTTTGTAGGGTGTATGAGCCAGATCGTCTGTGTGCACTTCTTTGCAGGAGGTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099617.2 ENSMUST00000184954.4 ENSMUST00000213210.2 |
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