Pregenerated sensors for OLFR1282 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096554Ensembl transcript IDs: ENSMUST00000099618.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS CCA 90 bp | ATATCACAACAAACAGGTTGCCTACCACAGCCATCAGGTAGAGGATaGAAAATGGTAGTAAGAGGAAGATCTCAAGTTGCCTTGAGGAAC | + |
Preference number: 5 (lower is better) Translates to: ISQQTGCLPQPSGRG*KMVVRGRSQVALRN Trigger: GTTCCTCAAGGCAACTTGAGATCTTCCTCTTACTACCATTTTCCATCCTCTACCTGATGGCTGTGGTAGGCAACCTGTTTGTTGTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099618.2 |
||
CDS TCA 90 bp | AATCAAGAGCATCTGACTAATGGCATGCACAAATCCAACAATCCATaGTATCACAACGAGCCAGATGCACTTCTGTCTGTCCATGATGCT | + |
Preference number: 5 (lower is better) Translates to: NQEHLTNGMHKSNNP*YHNEPDALLSVHDA Trigger: AGCATCATGGACAGACAGAAGTGCATCTGGCTCGTTGTGATATCATGGATTGTTGGATTTGTGCATGCCATTAGTCAGATGCTCTTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099618.2 |
||
CDS CCA 72 bp | CAAACAGGTTGCCTACCACAGCCATCAGGTAGAGGATaGAAAATGGTAGTAAGAGGAAGATCTCAAGTTGCC | + |
Preference number: 6 (lower is better) Translates to: QTGCLPQPSGRG*KMVVRGRSQVA Trigger: GGCAACTTGAGATCTTCCTCTTACTACCATTTTCCATCCTCTACCTGATGGCTGTGGTAGGCAACCTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099618.2 |
||
CDS GCA 72 bp | ATCTCACCTCCTGCAAAGAAGTGCACACAGACGATCTaGCTCATATACCCTACAAAGGAAATGGTTTTATTT | + |
Preference number: 6 (lower is better) Translates to: ISPPAKKCTQTI*LIYPTKEMVLF Trigger: AAATAAAACCATTTCCTTTGTAGGGTATATGAGGCAGATCGTCTGTGTGCACTTCTTTGCAGGAGGTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099618.2 |