Pregenerated sensors for OLFR1281 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095156Ensembl transcript IDs: ENSMUST00000090326.2, ENSMUST00000208176.3
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTACCCTTCCATGGCATTCCCTAATGTGCTTTCAATTAGGCCTGTaGGCTCACTTTGGTTTCTACAACTTAGTAAATGGTAGACCCCTG | + |
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Preference number: 1 (lower is better) Translates to: PTLPWHSLMCFQLGL*AHFGFYNLVNGRPL Trigger: CAGGGGTCTACCATTTACTAAGTTGTAGAAACCAAAGTGAGCTCACAGGCCTAATTGAAAGCACATTAGGGAATGCCATGGAAGGGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR GCA 90 bp | TACAACTTAGTAAATGGTAGACCCCTGCATGCTGAACATCTGCAGTaGAAAACACACTTTGTGTTTCCATACGATTTGAGTCTGCACTGT | + |
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Preference number: 1 (lower is better) Translates to: YNLVNGRPLHAEHLQ*KTHFVFPYDLSLHC Trigger: ACAGTGCAGACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATGCAGGGGTCTACCATTTACTAAGTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR TCA 90 bp | CTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTaGGTCTGCACTGTTATTCTTTGGCAGATCATGGACACTTACAGA | + |
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Preference number: 1 (lower is better) Translates to: LNICSAKHTLCFHTI*VCTVILWQIMDTYR Trigger: TCTGTAAGTGTCCATGATCTGCCAAAGAATAACAGTGCAGACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR TCA 90 bp | ACTGTTATTCTTTGGCAGATCATGGACACTTACAGAGTGATAAATTaGAAAAAGAGTCAAACTCCTTGTGTTGCTCATTCCTCAGAGATA | + |
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Preference number: 1 (lower is better) Translates to: TVILWQIMDTYRVIN*KKSQTPCVAHSSEI Trigger: TATCTCTGAGGAATGAGCAACACAAGGAGTTTGACTCTTTTTTCAATTTATCACTCTGTAAGTGTCCATGATCTGCCAAAGAATAACAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTCATTGCTGAGCTGTGAGCTTCTGATGATGTGGAGACAAATCCAGGTATTGGTAGGGAGAGAGCGATaGGAGTGGGTATGGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: TSLLSCELLMMWRQIQVLVGRER*EWVWGR Trigger: CCTTCCCCATACCCACTCCCATCGCTCTCTCCCTAC...CAATACCTGGATTTGTCTCCACATCATCAGAAGCTCACAGCTCAGCAATGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR TCA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTCTCATTGCTGAGCTGTaGGCTTCTGATGATGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSLIAEL*ASDDVE Trigger: CTCCACATCATCAGAAGCTCACAGCTCAGCAATGAG...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR CAA 90 bp | TGTTGCCTGCCTTTGGATCTCTTTCTCAAAACTGAGCTGCCTTTATaGACCTTAGTAGTTGAGGGTTTGCTTAGTTCTGCTGTGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: CCLPLDLFLKTELPL*TLVVEGLLSSAVTS Trigger: TGAAGTCACAGCAGAACTAAGCAAACCCTCAACTACTAAGGTCAATAAAGGCAGCTCAGTTTTGAGAAAGAGATCCAAAGGCAGGCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR TCA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTGACAGAGGGGAGATGTaGTCTGTCTGTAAAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSDRGEM*SVCKVS Trigger: ACTCACTTTACAGACAGATCACATCTCCCCTCTGTC...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR GCA 90 bp | ACCTCATTGCTGAGCTGTGAGCTTCTGATGATGTGGAGACAAATCCAGGTATTGAATGAGCATATAGAATaGTTTTGTCACTCACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TSLLSCELLMMWRQIQVLNEHIE*FCHSPG Trigger: CCCTGGTGAGTGACAAAAGCATTCTATATGCTCATT...CAATACCTGGATTTGTCTCCACATCATCAGAAGCTCACAGCTCAGCAATGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR CAA 90 bp | GCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTaGAGTCTGCACTGTTATTCTTTGGCAGATCATGGACACTTACAG | + |
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Preference number: 2 (lower is better) Translates to: AEHLQCKTHFVFPYD*SLHCYSLADHGHLQ Trigger: CTGTAAGTGTCCATGATCTGCCAAAGAATAACAGTGCAGACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR TCA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTTCTGCTGTGACTTCATaGACCAAAATGGGTTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSSAVTS*TKMGWY Trigger: GTACCAACCCATTTTGGTTCATGAAGTCACAGCAGA...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR TCA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTAGCAGAAGATGTTTCTaGTTCTGTTGCCTGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSSRRCF*FCCLPL Trigger: CAAAGGCAGGCAACAGAATCAGAAACATCTTCTGCT...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR CCA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTTGGGTTGGTACCTTTTaGAGGGCATCTCTTCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSWVGTF*RASLLL Trigger: TAAGAGAAGAGATGCCCTCCAAAAGGTACCAACCCA...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR CCA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTGAGCTTCTGATGATGTaGAGACAAATCCAGGTATTG | + |
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Preference number: 2 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSELLMM*RQIQVL Trigger: CAATACCTGGATTTGTCTCCACATCATCAGAAGCTC...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR TCA 72 bp | GTAGTTGAGGGTTTGCTTAGTTCTGCTGTGACTTCATaGACCAAAATGGGTTGGTACCTTTTGGAGGGCATC | + |
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Preference number: 3 (lower is better) Translates to: VVEGLLSSAVTS*TKMGWYLLEGI Trigger: GATGCCCTCCAAAAGGTACCAACCCATTTTGGTTCATGAAGTCACAGCAGAACTAAGCAAACCCTCAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR CCA 72 bp | TTAACGAGATTGGACCTAGATCACAGTTTCCCATCCTaGGCAAATCCAGCCAAGTCAGTTACTAGAAAAACC | + |
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Preference number: 3 (lower is better) Translates to: LTRLDLDHSFPS*ANPAKSVTRKT Trigger: GGTTTTTCTAGTAACTGACTTGGCTGGATTTGCCCAGGATGGGAAACTGTGATCTAGGTCCAATCTCGTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR TCA 72 bp | TGGGCCCTTAGTTTTCATGTTGAGTTGAGAGGACTGTaGCAGGATGACTATGACAGATTTAACGAGATTGGA | + |
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Preference number: 3 (lower is better) Translates to: WALSFHVELRGL*QDDYDRFNEIG Trigger: TCCAATCTCGTTAAATCTGTCATAGTCATCCTGTCACAGTCCTCTCAACTCAACATGAAAACTAAGGGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR GCA 72 bp | CCTAACAAAGCAGAAGATGTTTCTGATTCTGTTGCCTaGCTTTGGATCTCTTTCTCAAAACTGAGCTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: PNKAEDVSDSVA*LWISFSKLSCL Trigger: AAGGCAGCTCAGTTTTGAGAAAGAGATCCAAAGGCAGGCAACAGAATCAGAAACATCTTCTGCTTTGTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR GCA 72 bp | GTAAATGGTAGACCCCTGCATGCTGAACATCTGCAGTaGAAAACACACTTTGTGTTTCCATACGATTTGAGT | + |
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Preference number: 3 (lower is better) Translates to: VNGRPLHAEHLQ*KTHFVFPYDLS Trigger: ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATGCAGGGGTCTACCATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR CAA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTATGAACCAAAATGGGTaGGTACCTTTTGGAGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSMNQNG*VPFGGH Trigger: ATGCCCTCCAAAAGGTACCAACCCATTTTGGTTCAT...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR CAA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTACTGAGCTGCCTTTATaGACCTTAGTAGTTGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSTELPL*TLVVEG Trigger: ACCCTCAACTACTAAGGTCAATAAAGGCAGCTCAGT...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR TCA 72 bp | TGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTaGGTCTGCACTGTTATTCTTTGGCAGATCATGGAC | + |
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Preference number: 3 (lower is better) Translates to: CSAKHTLCFHTI*VCTVILWQIMD Trigger: GTCCATGATCTGCCAAAGAATAACAGTGCAGACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR TCA 72 bp | CCATGGCATTCCCTAATGTGCTTTCAATTAGGCCTGTaGGCTCACTTTGGTTTCTACAACTTAGTAAATGGT | + |
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Preference number: 3 (lower is better) Translates to: PWHSLMCFQLGL*AHFGFYNLVNG Trigger: ACCATTTACTAAGTTGTAGAAACCAAAGTGAGCTCACAGGCCTAATTGAAAGCACATTAGGGAATGCCATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR CAA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTAAAGAGTCAAACTCCTaGTGTTGCTCATTCCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSKESNS*CCSFLR Trigger: TCTGAGGAATGAGCAACACAAGGAGTTTGACTCTTT...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR CAA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTCTGCACTGTTATTCTTaGGCAGATCATGGACACTTA | + |
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Preference number: 3 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSLHCYS*ADHGHL Trigger: TAAGTGTCCATGATCTGCCAAAGAATAACAGTGCAG...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR CAA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTGCATATAGAATGCTTTaGTCACTCACCAGGGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSAYRML*SLTRVN Trigger: ATTAACCCTGGTGAGTGACAAAAGCATTCTATATGC...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR TCA 72 bp | GAGTCCATGAAGGTAAGTAGTAGGTCAGTAGTCAATTaGAGGTCAGTGAGTAGTGTATGTAGTCTTAAACCT | + |
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Preference number: 3 (lower is better) Translates to: ESMKVSSRSVVN*RSVSSVCSLKP Trigger: AGGTTTAAGACTACATACACTACTCACTGACCTTCAATTGACTACTGACCTACTACTTACCTTCATGGACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR-3UTR CAA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTGGTGTTCTGTTGTTTTaGTATTCCTGTATACACGTA | + |
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Preference number: 3 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSGVLLF*YSCIHV Trigger: TACGTGTATACAGGAATACAAAAACAACAGAACACC...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR CCA 72 bp | CTTCTAGCATTAGAACATAGCATGCTCACCGTGACCTaGGTTTCCATTCTTCATAATGTAATTTTTCATCTT | + |
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Preference number: 3 (lower is better) Translates to: LLALEHSMLTVT*VSILHNVIFHL Trigger: AAGATGAAAAATTACATTATGAAGAATGGAAACCCAGGTCACGGTGAGCATGCTATGTTCTAATGCTAGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS-3UTR TCA 90 bp | ACCTCATTGCTGAGCTGTGAGCTTCTGATGATGTGGAGACAAATCCAGGTATTGACAGCAGAACCACTATaGTATGGGATGTGCATGTGG | + |
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Preference number: 4 (lower is better) Translates to: TSLLSCELLMMWRQIQVLTAEPL*YGMCMW Trigger: CCACATGCACATCCCATATCATAGTGGTTCTGCTGT...CAATACCTGGATTTGTCTCCACATCATCAGAAGCTCACAGCTCAGCAATGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS-3UTR GCA 90 bp | ACCTCATTGCTGAGCTGTGAGCTTCTGATGATGTGGAGACAAATCCAGGTATTGCTTCCTCCAAAGAAATaGACACAGAGGATCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TSLLSCELLMMWRQIQVLLPPKK*TQRIWL Trigger: GAGCCAGATCCTCTGTGTGCATTTCTTTGGAGGAAG...CAATACCTGGATTTGTCTCCACATCATCAGAAGCTCACAGCTCAGCAATGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS-3UTR CCA 90 bp | ACCTCATTGCTGAGCTGTGAGCTTCTGATGATGTGGAGACAAATCCAGGTATTGCAGTGTATAGATTGCTaGATTCAGGAGAGGTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: TSLLSCELLMMWRQIQVLQCIDC*IQERCD Trigger: ATCACACCTCTCCTGAATCCAGCAATCTATACACTG...CAATACCTGGATTTGTCTCCACATCATCAGAAGCTCACAGCTCAGCAATGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS-3UTR TCA 90 bp | ACCTCATTGCTGAGCTGTGAGCTTCTGATGATGTGGAGACAAATCCAGGTATTGAAAATCAAGAGCAACTaGCTAATGGCATGCACAAAT | + |
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Preference number: 4 (lower is better) Translates to: TSLLSCELLMMWRQIQVLKIKSN*LMACTN Trigger: ATTTGTGCATGCCATTAGTCAGTTGCTCTTGATTTT...CAATACCTGGATTTGTCTCCACATCATCAGAAGCTCACAGCTCAGCAATGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS-3UTR GCA 90 bp | ACCTCATTGCTGAGCTGTGAGCTTCTGATGATGTGGAGACAAATCCAGGTATTGGAGTATCAGTATTCATaGAGGCTAATTTCATCACCA | + |
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Preference number: 4 (lower is better) Translates to: TSLLSCELLMMWRQIQVLEYQYS*RLISSP Trigger: TGGTGATGAAATTAGCCTGCATGAATACTGATACTC...CAATACCTGGATTTGTCTCCACATCATCAGAAGCTCACAGCTCAGCAATGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR CAA 72 bp | CCTTTGGATCTCTTTCTCAAAACTGAGCTGCCTTTATaGACCTTAGTAGTTGAGGGTTTGCTTAGTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PLDLFLKTELPL*TLVVEGLLSSA Trigger: AGCAGAACTAAGCAAACCCTCAACTACTAAGGTCAATAAAGGCAGCTCAGTTTTGAGAAAGAGATCCAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR CAA 72 bp | CTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTaGAGTCTGCACTGTTATTCTTTGGCAGATCATGGA | + |
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Preference number: 4 (lower is better) Translates to: LQCKTHFVFPYD*SLHCYSLADHG Trigger: TCCATGATCTGCCAAAGAATAACAGTGCAGACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS-3UTR TCA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTGAGGTACACAGTCCCTaGAAAATAAACTCAGAAACC | + |
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Preference number: 4 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSEVHSP*KINSET Trigger: GGTTTCTGAGTTTATTTTTCAGGGACTGTGTACCTC...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS-3UTR TCA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTTTTGGGTGTATTTACTaGGGAAAGGCAGAAGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSFGCIY*GKAEVN Trigger: GTTGACTTCTGCCTTTCCTCAGTAAATACACCCAAA...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS-3UTR GCA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTTCTCAGTGTATAGATTaGTGGATTCAGGAGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSSQCID*WIQERC Trigger: ACACCTCTCCTGAATCCAGCAATCTATACACTGAGA...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS-3UTR CCA 90 bp | ACCTCATTGCTGAGCTGTGAGCTTCTGATGATGTGGAGACAAATCCAGGTATTGCCAAGTGATGTTTACTaGCCACAGATAGATAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: TSLLSCELLMMWRQIQVLPSDVY*PQIDKN Trigger: ATTTTTATCTATCTGTGGCCAGTAAACATCACTTGG...CAATACCTGGATTTGTCTCCACATCATCAGAAGCTCACAGCTCAGCAATGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS-3UTR CCA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTAGAACCACTATGATATaGGATGTGCATGTGGATAGT | + |
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Preference number: 4 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSRTTMI*DVHVDS Trigger: ACTATCCACATGCACATCCCATATCATAGTGGTTCT...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| 3UTR CAA 72 bp | GTGTTTCCATACGATTTGAGTCTGCACTGTTATTCTTaGGCAGATCATGGACACTTACAGAGTGATAAATTG | + |
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Preference number: 4 (lower is better) Translates to: VFPYDLSLHCYS*ADHGHLQSDKL Trigger: CAATTTATCACTCTGTAAGTGTCCATGATCTGCCAAAGAATAACAGTGCAGACTCAAATCGTATGGAAACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS-3UTR CAA 90 bp | ACCTCATTGCTGAGCTGTGAGCTTCTGATGATGTGGAGACAAATCCAGGTATTGTTCTCAGTGTATAGATaGCTGGATTCAGGAGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: TSLLSCELLMMWRQIQVLFSVYR*LDSGEV Trigger: CACCTCTCCTGAATCCAGCAATCTATACACTGAGAA...CAATACCTGGATTTGTCTCCACATCATCAGAAGCTCACAGCTCAGCAATGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS TCA 90 bp | AATCAAGAGCAACTGACTAATGGCATGCACAAATCCAACAATCCATaGTATCACAACGAGCCAGATGCACTTCTGTCTGTCCATGATGCT | + |
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Preference number: 5 (lower is better) Translates to: NQEQLTNGMHKSNNP*YHNEPDALLSVHDA Trigger: AGCATCATGGACAGACAGAAGTGCATCTGGCTCGTTGTGATATCATGGATTGTTGGATTTGTGCATGCCATTAGTCAGTTGCTCTTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090326.2 ENSMUST00000208176.3 |
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| CDS TCA 90 bp | ATCACTCTAGGTCCACAGAATGGTAGATCCAAAATCAAGAGCAACTaGCTAATGGCATGCACAAATCCAACAATCCATGATATCACAACG | + |
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Preference number: 5 (lower is better) Translates to: ITLGPQNGRSKIKSN*LMACTNPTIHDITT Trigger: CGTTGTGATATCATGGATTGTTGGATTTGTGCATGCCATTAGTCAGTTGCTCTTGATTTTGGATCTACCATTCTGTGGACCTAGAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090326.2 ENSMUST00000208176.3 |
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| CDS-3UTR CAA 90 bp | CATGCTGAACATCTGCAGTGCAAAACACACTTTGTGTTTCCATACGATTTGAGTAACACAGCAAGAAACTaGTCCACCCAAGTGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: HAEHLQCKTHFVFPYDLSNTARN*STQVMF Trigger: AAACATCACTTGGGTGGACAAGTTTCTTGCTGTGTT...ACTCAAATCGTATGGAAACACAAAGTGTGTTTTGCACTGCAGATGTTCAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208176.3 |
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| CDS CCA 72 bp | CACAGCAAGAAACTTGTCCACCCAAGTGATGTTTACTaGCCACAGATAGATAAAAATGATGGGCCCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: HSKKLVHPSDVY*PQIDKNDGPKE Trigger: TTCTTTGGGCCCATCATTTTTATCTATCTGTGGCCAGTAAACATCACTTGGGTGGACAAGTTTCTTGCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090326.2 ENSMUST00000208176.3 |
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| CDS GCA 72 bp | CAGCATTTATTAGGATTTCCAGAGTATCAGTATTCATaGAGGCTAATTTCATCACCAAAGGAATATCACAGA | + |
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Preference number: 6 (lower is better) Translates to: QHLLGFPEYQYS*RLISSPKEYHR Trigger: TCTGTGATATTCCTTTGGTGATGAAATTAGCCTGCATGAATACTGATACTCTGGAAATCCTAATAAATGCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090326.2 ENSMUST00000208176.3 |
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