Pregenerated sensors for OLFR1280 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000109449Ensembl transcript IDs: ENSMUST00000082167.5, ENSMUST00000213551.2, ENSMUST00000219291.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTTCACTGGGCCCTTTGTACTCGAGTCTCACACTGGGCACCAGCTaGCCAGACCTGCAGGACTTAAGCAACAGGGGTCTCAGGGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: SSLGPLYSSLTLGTS*PDLQDLSNRGLREG Trigger: CCCTTCCCTGAGACCCCTGTTGCTTAAGTCCTGCAGGTCTGGGCAGCTGGTGCCCAGTGTGAGACTCGAGTACAAAGGGCCCAGTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CCA 90 bp | CCAGGTACTCCTCTCAGAGCCCATCATCAAACCAAGGCTGGCCCTTaGCATTGTCTCCAGCTTCTGACTATTAATAATAAAGCTGCTACG | + |
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Preference number: 1 (lower is better) Translates to: PGTPLRAHHQTKAGP*HCLQLLTINNKAAT Trigger: CGTAGCAGCTTTATTATTAATAGTCAGAAGCTGGAGACAATGCCAAGGGCCAGCCTTGGTTTGATGATGGGCTCTGAGAGGAGTACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CCA 90 bp | TGTGGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTaGCTGACCAAAAACAGAGTGGTGATCTTCACTGGGCCCTTTGTA | + |
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Preference number: 1 (lower is better) Translates to: CGGRFPCKMFLHKIC*LTKNRVVIFTGPFV Trigger: TACAAAGGGCCCAGTGAAGATCACCACTCTGTTTTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR GCA 90 bp | ATGGTAATTACAGGGCAGGGTTCCACCCAGCTAGCTGAGCATCTGTaGTCAACAGAGGCAGGCAAATTTCTGAATTCTTTTGCAATGTTA | + |
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Preference number: 1 (lower is better) Translates to: MVITGQGSTQLAEHL*STEAGKFLNSFAML Trigger: TAACATTGCAAAAGAATTCAGAAATTTGCCTGCCTCTGTTGAGCACAGATGCTCAGCTAGCTGGGTGGAACCCTGCCCTGTAATTACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CCA 90 bp | CCTAATGTTTGGCTGTGGGTTTATGCATCTGTTTCCATTAACTGTTaGGTGAAGCCTCTCAGATGTCAGTTATGCAAGGCCCCCTCATAT | + |
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Preference number: 1 (lower is better) Translates to: PNVWLWVYASVSINC*VKPLRCQLCKAPSY Trigger: ATATGAGGGGGCCTTGCATAACTGACATCTGAGAGGCTTCACCCAACAGTTAATGGAAACAGATGCATAAACCCACAGCCAAACATTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR GCA 90 bp | ACACACACACACACACACATACAGAAGGACGTGGACAGAATAGCATaGAAGCAGAATGTAGAAAGAGAACTCTCCAGAGAGAAAGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: THTHTHIQKDVDRIA*KQNVERELSREKAE Trigger: TTCTGCTTTCTCTCTGGAGAGTTCTCTTTCTACATTCTGCTTGCATGCTATTCTGTCCACGTCCTTCTGTATGTGTGTGTGTGTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR GCA 90 bp | CATCACGAACTTACCAGGATCTCTAGTTGTGGCGGCAGGTTCCCATaGAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAAAACAGA | + |
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Preference number: 1 (lower is better) Translates to: HHELTRISSCGGRFP*KMFLHKICWLTKNR Trigger: TCTGTTTTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCCACAACTAGAGATCCTGGTAAGTTCGTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| 3UTR GCA 90 bp | AAGGGTCAGGAAATCACTGAAGGAAGACCCCAGACTCAGATAGTATaGAAAGACACAGAGCATGTATTCTGCAGAAACATCTATCATACA | + |
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Preference number: 1 (lower is better) Translates to: KGQEITEGRPQTQIV*KDTEHVFCRNIYHT Trigger: TGTATGATAGATGTTTCTGCAGAATACATGCTCTGTGTCTTTGCATACTATCTGAGTCTGGGGTCTTCCTTCAGTGATTTCCTGACCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CCA 90 bp | TCAGGAGTTGAGGATATGTCTATTTCTCAGCAAAATGATAAACACTaGGACCTTCAGGACAGCCCTTCAGTGTATGGTAAAGAGTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: SGVEDMSISQQNDKH*DLQDSPSVYGKEFY Trigger: GTAGAACTCTTTACCATACACTGAAGGGCTGTCCTGAAGGTCCCAGTGTTTATCATTTTGCTGAGAAATAGACATATCCTCAACTCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR TCA 90 bp | TTCAAGTGTCACCTATTGGGCCCTCCTAGTTACTTAGCGATTCCATaGTTAGAAACAGCTTCAGTTCAGGAGTTGAGGATATGTCTATTT | + |
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Preference number: 1 (lower is better) Translates to: FKCHLLGPPSYLAIP*LETASVQELRICLF Trigger: AAATAGACATATCCTCAACTCCTGAACTGAAGCTGTTTCTAATCATGGAATCGCTAAGTAACTAGGAGGGCCCAATAGGTGACACTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR GCA 90 bp | AGACCCCAGACTCAGATAGTATGCAAAGACACAGAGCATGTATTCTaGAGAAACATCTATCATACAAAGATTACCATTGTTCAGAATGGC | + |
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Preference number: 1 (lower is better) Translates to: RPQTQIVCKDTEHVF*RNIYHTKITIVQNG Trigger: GCCATTCTGAACAATGGTAATCTTTGTATGATAGATGTTTCTGCAGAATACATGCTCTGTGTCTTTGCATACTATCTGAGTCTGGGGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR TCA 90 bp | CTAAACCTTAGGACTCATTCCAAGGTGTTACAGAAAACCATTAACTaGGGAAGATATACACCACAGTACCATAGTTGCAAATACAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: LNLRTHSKVLQKTIN*GRYTPQYHSCKYRR Trigger: TCTCCTGTATTTGCAACTATGGTACTGTGGTGTATATCTTCCTCAGTTAATGGTTTTCTGTAACACCTTGGAATGAGTCCTAAGGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR TCA 90 bp | TCTCTAGATTATAGCATAGCTCTAAACACATACACAAAACACATTTaGCCATTTCCTTGTCCTTCTACAAGATTTATTCTCTGCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: SLDYSIALNTYTKHI*PFPCPSTRFILCWP Trigger: GGGCCAGCAGAGAATAAATCTTGTAGAAGGACAAGGAAATGGTCAAATGTGTTTTGTGTATGTGTTTAGAGCTATGCTATAATCTAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| 3UTR TCA 90 bp | AAGCATCATTTGGATATATGCTCCAGGAGTGATATAGCTAGGTCTTaGGGTATAACTAGTCTCAATTTTCTGAGAAAATGCCAAATTGAT | + |
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Preference number: 1 (lower is better) Translates to: KHHLDICSRSDIARS*GITSLNFLRKCQID Trigger: ATCAATTTGGCATTTTCTCAGAAAATTGAGACTAGTTATACCTCAAGACCTAGCTATATCACTCCTGGAGCATATATCCAAATGATGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR TCA 90 bp | CCTGTTACTATGATTTGGGGTAGTGGCCAATATCTTCTTCATTATTaGTTTTCTATAGGAACTGTCATCCATGAATATTGCTTTCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: PVTMIWGSGQYLLHY*FSIGTVIHEYCFPK Trigger: CTTAGGAAAGCAATATTCATGGATGACAGTTCCTATAGAAAATCAATAATGAAGAAGATATTGGCCACTACCCCAAATCATAGTAACAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGACCATAGACAGAGAGGGAAGAGAATTAGACGTTCCCTTGATCCAAGCAGATGGAGGCTGAGATaGCAGGGGCTCTTGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: RTDHRQRGKRIRRSLDPSRWRLR*QGLLGP Trigger: GGGGCCCAAGAGCCCCTGGCATCTCAGCCTCCATCT...GCTTGGATCAAGGGAACGTCTAATTCTCTTCCCTCTCTGTCTATGGTCTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAAGGACTAGATGGAGGCTaGGATGCCAGGGGCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: GGRFPCKMFLHKICWLTKGLDGG*DARGSW Trigger: CCAAGAGCCCCTGGCATCTCAGCCTCCATCTAGTCC...TTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTACTTCCCACTGTTCCCAGGTACTCCTCTCAGAGCCCATCATCAAACCAAGTGGAAGTGTTACCATTaGTCCACATCCTCACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: EYFPLFPGTPLRAHHQTKWKCYH*STSSPA Trigger: TGCTGGTGAGGATGTGGAGCAATGGTAACACTTCCA...CTTGGTTTGATGATGGGCTCTGAGAGGAGTACCTGGGAACAGTGGGAAGTACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGGAAGGGAACAGCAATGACAAATTTGGGATCAGGAGATTTGAAGGAAGGAGATTAAGGGAATGGTaGTTGCCAGAGAACCCACCC | + |
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Preference number: 2 (lower is better) Translates to: LREGNSNDKFGIRRFEGRRLREW*LPENPP Trigger: GGGTGGGTTCTCTGGCAATCACCATTCCCTTAATCT...CCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGACCATAGACAGAGAGGGAAGAGAATTAGACGTTCCCTTGATCCAAGCTGGAAGTGTTACCATTaGTCCACATCCTCACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RTDHRQRGKRIRRSLDPSWKCYH*STSSPA Trigger: TGCTGGTGAGGATGTGGAGCAATGGTAACACTTCCA...GCTTGGATCAAGGGAACGTCTAATTCTCTTCCCTCTCTGTCTATGGTCTGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| 3UTR-3UTR GCA 90 bp | GGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAACTAGCTGAGCATCTGTaGTCAACAGAGGCAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: GGRFPCKMFLHKICWLTKLAEHL*STEAGK Trigger: TTTGCCTGCCTCTGTTGAGCACAGATGCTCAGCTAG...TTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR CCA 90 bp | GGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAATCTCCCCATCTTCAGTaGGATTCCCTAAACTCCACC | + |
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Preference number: 2 (lower is better) Translates to: GGRFPCKMFLHKICWLTKSPHLQ*DSLNST Trigger: GGTGGAGTTTAGGGAATCCCACTGAAGATGGGGAGA...TTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAAGAGTCTAGCAAGTACTaGGAACAAAGGGCAGAGATA | + |
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Preference number: 2 (lower is better) Translates to: GGRFPCKMFLHKICWLTKESSKY*EQRAEI Trigger: TATCTCTGCCCTTTGTTCTCAGTACTTGCTAGACTC...TTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTACTTCCCACTGTTCCCAGGTACTCCTCTCAGAGCCCATCATCAAACCAAGCATCATTTGGATATATaGTCCAGGAGTGATATAGCT | + |
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Preference number: 2 (lower is better) Translates to: EYFPLFPGTPLRAHHQTKHHLDI*SRSDIA Trigger: AGCTATATCACTCCTGGAGCATATATCCAAATGATG...CTTGGTTTGATGATGGGCTCTGAGAGGAGTACCTGGGAACAGTGGGAAGTACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATGTTTACAAAGGCAAATAGATTCCGAGTTCAGGATCAGCCAAGACTTGAGACCAAGGCTGGCCCTTaGCATTGTCTCCAGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FMFTKANRFRVQDQPRLETKAGP*HCLQLL Trigger: CAGAAGCTGGAGACAATGCCAAGGGCCAGCCTTGGT...CTCAAGTCTTGGCTGATCCTGAACTCGGAATCTATTTGCCTTTGTAAACATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAATGGGCTCAGGTTAGTTaGTTCTGTAGGTTTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: GGRFPCKMFLHKICWLTKWAQVS*FCRFSC Trigger: ACAAGAAAACCTACAGAATCAACTAACCTGAGCCCA...TTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR TCA 90 bp | CAGACCATAGACAGAGAGGGAAGAGAATTAGACGTTCCCTTGATCCAAGCATTCTCCCTAGGAGAGCTCTaGAACAGCTTACATTCATTT | + |
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Preference number: 2 (lower is better) Translates to: QTIDREGRELDVPLIQAFSLGEL*NSLHSF Trigger: AAATGAATGTAAGCTGTTTCAGAGCTCTCCTAGGGA...GAATGCTTGGATCAAGGGAACGTCTAATTCTCTTCCCTCTCTGTCTATGGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| 3UTR-3UTR GCA 90 bp | GGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAATACCATAGGAACACATaGTCTGAGAGTCTAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: GGRFPCKMFLHKICWLTKYHRNT*SESLAS Trigger: ACTTGCTAGACTCTCAGAGCATGTGTTCCTATGGTA...TTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTCTGGGACAGACTTGCTTCTACTGTTAGGTGTCCCACATGAAGAACATGATTACCATAGGAACACATaGTCTGAGAGTCTAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: ESGTDLLLLLGVPHEEHDYHRNT*SESLAS Trigger: ACTTGCTAGACTCTCAGAGCATGTGTTCCTATGGTA...ATCATGTTCTTCATGTGGGACACCTAACAGTAGAAGCAAGTCTGTCCCAGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGGAAGGGAACAGCAATGACAAATTTGGGATCAGGAGATTTGAAGGAAGGTGGAGAGAAGCAGAGTaGAAAAGCTATATCAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LREGNSNDKFGIRRFEGRWREAE*KSYIKQ Trigger: CTGCTTGATATAGCTTTTCCACTCTGCTTCTCTCCA...CCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAACAAAGGGCAGAGATAAGTCCTCCTCCCTTTTCCTACTGATTTCTTTAATACATGCTCTCTGGTaGCTCAGTTTTTGTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LRTKGRDKSSSLFLLISLIHALW*LSFCGP Trigger: TGGCCCACAAAAACTGAGCCACCAGAGAGCATGTAT...TAAAGAAATCAGTAGGAAAAGGGAGGAGGACTTATCTCTGCCCTTTGTTCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 90 bp | TGTTTACAAAGGCAAATAGATTCCGAGTTCAGGATCAGCCAAGACTaGAGCAAGATTTGGCTCAAGCATGGTGGCAATGGTAATTACAGG | + |
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Preference number: 2 (lower is better) Translates to: CLQRQIDSEFRISQD*SKIWLKHGGNGNYR Trigger: CCTGTAATTACCATTGCCACCATGCTTGAGCCAAATCTTGCTCAAGTCTTGGCTGATCCTGAACTCGGAATCTATTTGCCTTTGTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 90 bp | GCCACCAGCCTTCATGCCTCTGTCTATGGAATGCAGGGATTAAACTaGTGTACTACCATGCCTAGATCTGAACGTTTCTTAATTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: ATSLHASVYGMQGLN*CTTMPRSERFLIPF Trigger: AAAAGGAATTAAGAAACGTTCAGATCTAGGCATGGTAGTACACAAGTTTAATCCCTGCATTCCATAGACAGAGGCATGAAGGCTGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAAATAGGGTATGAAAAGTaGACACCTCACCAAAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: GGRFPCKMFLHKICWLTKIGYEK*TPHQRF Trigger: AAACCTTTGGTGAGGTGTTCACTTTTCATACCCTAT...TTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGGAAGGGAACAGCAATGACAAATTTGGGATCAGGAGATTTGAAGGAAGGATAGGGTATGAAAAGTaGACACCTCACCAAAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LREGNSNDKFGIRRFEGRIGYEK*TPHQRF Trigger: AAACCTTTGGTGAGGTGTTCACTTTTCATACCCTAT...CCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGGAAGGGAACAGCAATGACAAATTTGGGATCAGGAGATTTGAAGGAAGGATTTCTTTAGCCTTCTaGTCTGTCACTTTGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: LREGNSNDKFGIRRFEGRISLAF*SVTLRC Trigger: GCATCTCAAAGTGACAGAGCAGAAGGCTAAAGAAAT...CCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGGAAGGGAACAGCAATGACAAATTTGGGATCAGGAGATTTGAAGGAAGGCACTTGTTACTTATGTaGCAAAGTAAGGGTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LREGNSNDKFGIRRFEGRHLLLM*QSKGQE Trigger: TTCCTGACCCTTACTTTGGCACATAAGTAACAAGTG...CCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCAGAAACATCTATCATACAAAGATTACCATTGTTCAGAATGGCAACATCACCAAGGCTGGCCCTTaGCATTGTCTCCAGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FCRNIYHTKITIVQNGNITKAGP*HCLQLL Trigger: CAGAAGCTGGAGACAATGCCAAGGGCCAGCCTTGGT...GATGTTGCCATTCTGAACAATGGTAATCTTTGTATGATAGATGTTTCTGCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACAGACCATAGACAGAGAGGGAAGAGAATTAGACGTTCCCTTGATCCAAGCACCCTAATAGATTCCTaGGAGTTTCAATTGTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: RTDHRQRGKRIRRSLDPSTLIDS*EFQLFK Trigger: CTTGAACAATTGAAACTCCCAGGAATCTATTAGGGT...GCTTGGATCAAGGGAACGTCTAATTCTCTTCCCTCTCTGTCTATGGTCTGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAACAAAGGGCAGAGATAAGTCCTCCTCCCTTTTCCTACTGATTTCTTTACTTTCCCATTCTCCATaGGATTCAAGTGTCACCTAT | + |
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Preference number: 2 (lower is better) Translates to: LRTKGRDKSSSLFLLISLLSHSP*DSSVTY Trigger: ATAGGTGACACTTGAATCTCATGGAGAATGGGAAAG...TAAAGAAATCAGTAGGAAAAGGGAGGAGGACTTATCTCTGCCCTTTGTTCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 90 bp | CACTATGGGCTCAGGTTAGTTGATTCTGTAGGTTTTCTTGTGGTTTaGTCCTTGACCTTTCTTAAGCCTTTAATCCTTTCTCCCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: HYGLRLVDSVGFLVV*SLTFLKPLILSPHL Trigger: AAGATGGGGAGAAAGGATTAAAGGCTTAAGAAAGGTCAAGGACAAAACCACAAGAAAACCTACAGAATCAACTAACCTGAGCCCATAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGGAAGGGAACAGCAATGACAAATTTGGGATCAGGAGATTTGAAGGAAGGCATCCACAGAGACATTaGAATACCTTTTATAACAGA | + |
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Preference number: 2 (lower is better) Translates to: LREGNSNDKFGIRRFEGRHPQRH*NTFYNR Trigger: TCTGTTATAAAAGGTATTCCAATGTCTCTGTGGATG...CCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTGGGACAGACTTGCTTCTACTGTTAGGTGTCCCACATGAAGAACATGATCATCCACAGAGACATTaGAATACCTTTTATAACAGA | + |
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Preference number: 2 (lower is better) Translates to: ESGTDLLLLLGVPHEEHDHPQRH*NTFYNR Trigger: TCTGTTATAAAAGGTATTCCAATGTCTCTGTGGATG...ATCATGTTCTTCATGTGGGACACCTAACAGTAGAAGCAAGTCTGTCCCAGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 90 bp | GTCTCAGGGAAGGGAACAGCAATGACAAATTTGGGATCAGGAGATTaGAAGGAAGGAGACAAGATAAAAGTTCTGTTCAAGTCTCATTTA | + |
|
Preference number: 2 (lower is better) Translates to: VSGKGTAMTNLGSGD*KEGDKIKVLFKSHL Trigger: TAAATGAGACTTGAACAGAACTTTTATCTTGTCTCCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR CAA 90 bp | CAAGAAATTAACATAAAACAGTCAGTTTTGAAGGACATGGACAGATaGGTGTGCCAAGGACAGACCATAGACAGAGAGGGAAGAGAATTA | + |
|
Preference number: 2 (lower is better) Translates to: QEINIKQSVLKDMDR*VCQGQTIDREGREL Trigger: TAATTCTCTTCCCTCTCTGTCTATGGTCTGTCCTTGGCACACCAATCTGTCCATGTCCTTCAAAACTGACTGTTTTATGTTAATTTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATGCAAGCAGAATGTAGAAAGAGAACTCTCCAGAGAGAAAGCAGAAAATGGACATCATTTGGATATATaGTCCAGGAGTGATATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: ACKQNVERELSREKAENGHHLDI*SRSDIA Trigger: AGCTATATCACTCCTGGAGCATATATCCAAATGATG...TCCATTTTCTGCTTTCTCTCTGGAGAGTTCTCTTTCTACATTCTGCTTGCATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR-3UTR GCA 90 bp | TATTCACTCACCATTGTGACTAATGACACCCAGGTAAAATGGATATTCCCCACAATAGTTGGAGAGGACTaGTTTTCTCAAACCCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: YSLTIVTNDTQVKWIFPTIVGED*FSQTHS Trigger: AGAATGGGTTTGAGAAAAGCAGTCCTCTCCAACTAT...TGTGGGGAATATCCATTTTACCTGGGTGTCATTAGTCACAATGGTGAGTGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCTGCAGAAACATCTATCATACAAAGATTACCATTGTTCAGAATGGCAACATCGAGTCTAGCAAGTACTaGGAACAAAGGGCAGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: FCRNIYHTKITIVQNGNIESSKY*EQRAEI Trigger: TATCTCTGCCCTTTGTTCTCAGTACTTGCTAGACTC...GATGTTGCCATTCTGAACAATGGTAATCTTTGTATGATAGATGTTTCTGCAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR-3UTR TCA 90 bp | TATTCACTCACCATTGTGACTAATGACACCCAGGTAAAATGGATATTCCCCACATACACAAAACACATTTaGCCATTTCCTTGTCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: YSLTIVTNDTQVKWIFPTYTKHI*PFPCPS Trigger: AGAAGGACAAGGAAATGGTCAAATGTGTTTTGTGTA...TGTGGGGAATATCCATTTTACCTGGGTGTCATTAGTCACAATGGTGAGTGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGCAGAAACATCTATCATACAAAGATTACCATTGTTCAGAATGGCAACATCTGGAGAGAAGCAGAGTaGAAAAGCTATATCAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: FCRNIYHTKITIVQNGNIWREAE*KSYIKQ Trigger: CTGCTTGATATAGCTTTTCCACTCTGCTTCTCTCCA...GATGTTGCCATTCTGAACAATGGTAATCTTTGTATGATAGATGTTTCTGCAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGCAGAAACATCTATCATACAAAGATTACCATTGTTCAGAATGGCAACATCATTTCTTTAGCCTTCTaGTCTGTCACTTTGAGATGC | + |
|
Preference number: 2 (lower is better) Translates to: FCRNIYHTKITIVQNGNIISLAF*SVTLRC Trigger: GCATCTCAAAGTGACAGAGCAGAAGGCTAAAGAAAT...GATGTTGCCATTCTGAACAATGGTAATCTTTGTATGATAGATGTTTCTGCAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR CCA 72 bp | TTGTTGGCTGACCAAAAACAGAGTGGTGATCTTCACTaGGCCCTTTGTACTCGAGTCTCACACTGGGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: LLADQKQSGDLH*ALCTRVSHWAP Trigger: TGGTGCCCAGTGTGAGACTCGAGTACAAAGGGCCCAGTGAAGATCACCACTCTGTTTTTGGTCAGCCAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR TCA 72 bp | AATGGTAATTACAGGGCAGGGTTCCACCCAGCTAGCTaGGCATCTGTGCTCAACAGAGGCAGGCAAATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NGNYRAGFHPAS*ASVLNRGRQIS Trigger: AGAAATTTGCCTGCCTCTGTTGAGCACAGATGCTCAGCTAGCTGGGTGGAACCCTGCCCTGTAATTACCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR GCA 72 bp | ACAGGGCAGGGTTCCACCCAGCTAGCTGAGCATCTGTaGTCAACAGAGGCAGGCAAATTTCTGAATTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TGQGSTQLAEHL*STEAGKFLNSF Trigger: AAAAGAATTCAGAAATTTGCCTGCCTCTGTTGAGCACAGATGCTCAGCTAGCTGGGTGGAACCCTGCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR GCA 72 bp | CGTTCAGTCCCTCAATTCCTTCCCCATCACTACCCCTaGATATCTCGTAGGCAGGATAAATTGTGGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RSVPQFLPHHYP*ISRRQDKLWAE Trigger: TTCTGCCCACAATTTATCCTGCCTACGAGATATGCAGGGGTAGTGATGGGGAAGGAATTGAGGGACTGAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR CCA 72 bp | CTCACCAAAGGTTTGGTTTGTCTCATACATGCTCTCTaGTGGCTCAGTTTTTGTGGGCCACTATGGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTKGLVCLIHAL*WLSFCGPLWAQ Trigger: CTGAGCCCATAGTGGCCCACAAAAACTGAGCCACCAGAGAGCATGTATGAGACAAACCAAACCTTTGGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR GCA 72 bp | ACCACCAGGATCTCTAGTTGTGGCGGCAGGTTCCCATaGAAGATGTTTCTACACAAAATTTGTTGGCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: TTRISSCGGRFP*KMFLHKICWLT Trigger: GGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCCACAACTAGAGATCCTGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213551.2 |
||
| 3UTR CCA 72 bp | CACTACCCCTGCATATCTCGTAGGCAGGATAAATTGTaGGCAGAAGGTTTTGTGACTGGGTTAGTGCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: HYPCISRRQDKL*AEGFVTGLVPY Trigger: GTAAGGCACTAACCCAGTCACAAAACCTTCTGCCCACAATTTATCCTGCCTACGAGATATGCAGGGGTAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR CCA 72 bp | ACCAAAGGTTTGGTTTGTCTCATACATGCTCTCTGGTaGCTCAGTTTTTGTGGGCCACTATGGGCTCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TKGLVCLIHALW*LSFCGPLWAQV Trigger: AACCTGAGCCCATAGTGGCCCACAAAAACTGAGCCACCAGAGAGCATGTATGAGACAAACCAAACCTTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAACGTAGGCAGGATAAATaGTGGGCAGAAGGTTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GGRFPCKMFLHKICWLTKRRQDK*WAEGFV Trigger: CACAAAACCTTCTGCCCACAATTTATCCTGCCTACG...TTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR GCA 72 bp | CTTACCAGGATCTCTAGTTGTGGCGGCAGGTTCCCATaGAAGATGTTTCTACACAAAATTTGTTGGCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: LTRISSCGGRFP*KMFLHKICWLT Trigger: GGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCCACAACTAGAGATCCTGGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
||
| 3UTR CCA 72 bp | TGGCTGTGGGTTTATGCATCTGTTTCCATTAACTGTTaGGTGAAGCCTCTCAGATGTCAGTTATGCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WLWVYASVSINC*VKPLRCQLCKA Trigger: GGCCTTGCATAACTGACATCTGAGAGGCTTCACCCAACAGTTAATGGAAACAGATGCATAAACCCACAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCTGGGACAGACTTGCTTCTACTGTTAGGTGTCCCACATGAAGAACATGATCACCTCACCAAAGGTTaGGTTTGTCTCATACATGCT | + |
|
Preference number: 3 (lower is better) Translates to: ESGTDLLLLLGVPHEEHDHLTKG*VCLIHA Trigger: AGCATGTATGAGACAAACCAAACCTTTGGTGAGGTG...ATCATGTTCTTCATGTGGGACACCTAACAGTAGAAGCAAGTCTGTCCCAGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR GCA 72 bp | AAACAGTCAGTTTTGAAGGACATGGACAGATTGGTGTaGCAAGGACAGACCATAGACAGAGAGGGAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KQSVLKDMDRLV*QGQTIDREGRE Trigger: TTCTCTTCCCTCTCTGTCTATGGTCTGTCCTTGGCACACCAATCTGTCCATGTCCTTCAAAACTGACTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
||
| 3UTR CCA 72 bp | GGTTTTGTGACTGGGTTAGTGCCTTACTCTCTCCACTaGAAGTCTTTTCTGGTTGTAGGAGATGGTCGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GFVTGLVPYSLH*KSFLVVGDGRF Trigger: AAAACGACCATCTCCTACAACCAGAAAAGACTTCCAGTGGAGAGAGTAAGGCACTAACCCAGTCACAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR GCA 72 bp | CCTCACTCTCATCTCCTATCCCCCATCCTCCTGTTTTaGCTTAGCATATCAAGTTTCAATAGGACTAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PHSHLLSPILLF*LSISSFNRTKS Trigger: AGACTTAGTCCTATTGAAACTTGATATGCTAAGGCAAAACAGGAGGATGGGGGATAGGAGATGAGAGTGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR CCA 72 bp | TTAGGAAAAAGTGATTCAAAGGAGGGCAATAGAGTCTaGGACAGACTTGCTTCTACTGTTAGGTGTCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LGKSDSKEGNRV*DRLASTVRCPT Trigger: TGTGGGACACCTAACAGTAGAAGCAAGTCTGTCCCAGACTCTATTGCCCTCCTTTGAATCACTTTTTCCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGGAAGGGAACAGCAATGACAAATTTGGGATCAGGAGATTTGAAGGAAGGCACCAGCACGTTCTGTaGCTTGATATGTTTTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LREGNSNDKFGIRRFEGRHQHVL*LDMFLK Trigger: TTTCAAAAACATATCAAGCAACAGAACGTGCTGGTG...CCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCTGGGACAGACTTGCTTCTACTGTTAGGTGTCCCACATGAAGAACATGATGGTTTTCTTGTGGTTTaGTCCTTGACCTTTCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ESGTDLLLLLGVPHEEHDGFLVV*SLTFLK Trigger: CTTAAGAAAGGTCAAGGACAAAACCACAAGAAAACC...ATCATGTTCTTCATGTGGGACACCTAACAGTAGAAGCAAGTCTGTCCCAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR TCA 72 bp | AAGGCCCCCTCATATAGCAGAATATCATTAATAGTGTaGAGGATGGACTCTTTCTCATGGCATGGGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KAPSYSRISLIV*RMDSFSWHGSQ Trigger: TTGAGACCCATGCCATGAGAAAGAGTCCATCCTTCACACTATTAATGATATTCTGCTATATGAGGGGGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR GCA 72 bp | GAAATCACTGAAGGAAGACCCCAGACTCAGATAGTATaGAAAGACACAGAGCATGTATTCTGCAGAAACATC | + |
|
Preference number: 3 (lower is better) Translates to: EITEGRPQTQIV*KDTEHVFCRNI Trigger: GATGTTTCTGCAGAATACATGCTCTGTGTCTTTGCATACTATCTGAGTCTGGGGTCTTCCTTCAGTGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGATAAACACTGGGACCTTCAGGACAGCCCTTCAGTGTATGGTAAAGAGTTCCACCAGCACGTTCTGTaGCTTGATATGTTTTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NDKHWDLQDSPSVYGKEFHQHVL*LDMFLK Trigger: TTTCAAAAACATATCAAGCAACAGAACGTGCTGGTG...GAACTCTTTACCATACACTGAAGGGCTGTCCTGAAGGTCCCAGTGTTTATCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGGAAGGGAACAGCAATGACAAATTTGGGATCAGGAGATTTGAAGGAAGGATACAAAGATTACCATaGTTCAGAATGGCAACATCC | + |
|
Preference number: 3 (lower is better) Translates to: LREGNSNDKFGIRRFEGRIQRLP*FRMATS Trigger: GGATGTTGCCATTCTGAACAATGGTAATCTTTGTAT...CCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACCATAGACAGAGAGGGAAGAGAATTAGACGTTCCCTTGATCCAAGCATTCATACACAAAACACATTaGACCATTTCCTTGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QTIDREGRELDVPLIQAFIHKTH*TISLSF Trigger: GAAGGACAAGGAAATGGTCAAATGTGTTTTGTGTAT...GAATGCTTGGATCAAGGGAACGTCTAATTCTCTTCCCTCTCTGTCTATGGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
||
| 3UTR CCA 72 bp | GAGGATATGTCTATTTCTCAGCAAAATGATAAACACTaGGACCTTCAGGACAGCCCTTCAGTGTATGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: EDMSISQQNDKH*DLQDSPSVYGK Trigger: TTTACCATACACTGAAGGGCTGTCCTGAAGGTCCCAGTGTTTATCATTTTGCTGAGAAATAGACATATCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR-3UTR CAA 90 bp | TATTCACTCACCATTGTGACTAATGACACCCAGGTAAAATGGATATTCCCCACAATGGTGAAGCATCATTaGGATATATGCTCCAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: YSLTIVTNDTQVKWIFPTMVKHH*DICSRS Trigger: ACTCCTGGAGCATATATCCAAATGATGCTTCACCAT...TGTGGGGAATATCCATTTTACCTGGGTGTCATTAGTCACAATGGTGAGTGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
||
| 3UTR GCA 72 bp | CCACATGAAGAACATGATGTACACTTGTTACTTATGTaGCAAAGTAAGGGTCAGGAAATCACTGAAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PHEEHDVHLLLM*QSKGQEITEGR Trigger: TCTTCCTTCAGTGATTTCCTGACCCTTACTTTGGCACATAAGTAACAAGTGTACATCATGTTCTTCATGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR CCA 72 bp | TCACTCACCATTGTGACTAATGACACCCAGGTAAAATaGATATTCCCCACAGTAATACAACCTGTTACTATG | + |
|
Preference number: 3 (lower is better) Translates to: SLTIVTNDTQVK*IFPTVIQPVTM Trigger: CATAGTAACAGGTTGTATTACTGTGGGGAATATCCATTTTACCTGGGTGTCATTAGTCACAATGGTGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
||
| 3UTR CCA 72 bp | ATTCAAATTCAGAAATCACAGAGTAATTCTGTTCATTaGCTTGAACAGAGGCGTGGATTCAAAACCACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: IQIQKSQSNSVH*LEQRRGFKTTR Trigger: CCTGGTGGTTTTGAATCCACGCCTCTGTTCAAGCCAATGAACAGAATTACTCTGTGATTTCTGAATTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213551.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCAGAAACATCTATCATACAAAGATTACCATTGTTCAGAATGGCAACATCCACCAAAGGTTTGGTTaGTCTCATACATGCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FCRNIYHTKITIVQNGNIHQRFG*SHTCSL Trigger: CAGAGAGCATGTATGAGACAAACCAAACCTTTGGTG...GATGTTGCCATTCTGAACAATGGTAATCTTTGTATGATAGATGTTTCTGCAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR TCA 72 bp | ATTTCCAAAATAGATGTACAAGTTTTCATTTCCACCTaGATGGAAGTGTTACCATTGCTCCACATCCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: ISKIDVQVFIST*MEVLPLLHILT Trigger: GGTGAGGATGTGGAGCAATGGTAACACTTCCATTCAGGTGGAAATGAAAACTTGTACATCTATTTTGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR TCA 72 bp | AGGACTCATTCCAAGGTGTTACAGAAAACCATTAACTaGGGAAGATATACACCACAGTACCATAGTTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RTHSKVLQKTIN*GRYTPQYHSCK Trigger: TTTGCAACTATGGTACTGTGGTGTATATCTTCCTCAGTTAATGGTTTTCTGTAACACCTTGGAATGAGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR TCA 72 bp | TTGGAGAGGACTGCTTTTCTCAAACCCATTCTCTTATaGCTCAGGTTTAACTTATCTCTATTAAGGGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LERTAFLKPILL*LRFNLSLLRVQ Trigger: TTGGACCCTTAATAGAGATAAGTTAAACCTGAGTCATAAGAGAATGGGTTTGAGAAAAGCAGTCCTCTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
||
| 3UTR CCA 72 bp | AAAGTTGGCCCTGAGAAAACATTGTTGACCAAGAACTaGAAGGTCCAAGAAATTCAAATTCAGAAATCACAG | + |
|
Preference number: 3 (lower is better) Translates to: KVGPEKTLLTKN*KVQEIQIQKSQ Trigger: CTGTGATTTCTGAATTTGAATTTCTTGGACCTTCCAGTTCTTGGTCAACAATGTTTTCTCAGGGCCAACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213551.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCAGAAACATCTATCATACAAAGATTACCATTGTTCAGAATGGCAACATCATGGTGAAGCATCATTaGGATATATGCTCCAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FCRNIYHTKITIVQNGNIMVKHH*DICSRS Trigger: ACTCCTGGAGCATATATCCAAATGATGCTTCACCAT...GATGTTGCCATTCTGAACAATGGTAATCTTTGTATGATAGATGTTTCTGCAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR TCA 72 bp | TTGGATATATGCTCCAGGAGTGATATAGCTAGGTCTTaGGGTATAACTAGTCTCAATTTTCTGAGAAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LDICSRSDIARS*GITSLNFLRKC Trigger: GCATTTTCTCAGAAAATTGAGACTAGTTATACCTCAAGACCTAGCTATATCACTCCTGGAGCATATATCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR TCA 72 bp | ATGATTTGGGGTAGTGGCCAATATCTTCTTCATTATTaGTTTTCTATAGGAACTGTCATCCATGAATATTGC | + |
|
Preference number: 3 (lower is better) Translates to: MIWGSGQYLLHY*FSIGTVIHEYC Trigger: GCAATATTCATGGATGACAGTTCCTATAGAAAATCAATAATGAAGAAGATATTGGCCACTACCCCAAATCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
||
| CDS-3UTR CCA 90 bp | TCATTTCCACCTGAATGGAAGTGTTACCATTGCTCCACATCCTCACCAGCACGTTGCACACAGAGGATCTaGCTCATGCAGCCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPPEWKCYHCSTSSPARCTQRI*LMQPPK Trigger: CTTTGGGGGCTGCATGAGCCAGATCCTCTGTGTGCA...ACGTGCTGGTGAGGATGTGGAGCAATGGTAACACTTCCATTCAGGTGGAAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| 3UTR CAA 72 bp | CATCACTACCCCTGCATATCTCGTAGGCAGGATAAATaGTGGGCAGAAGGTTTTGTGACTGGGTTAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HHYPCISRRQDK*WAEGFVTGLVP Trigger: AGGCACTAACCCAGTCACAAAACCTTCTGCCCACAATTTATCCTGCCTACGAGATATGCAGGGGTAGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| CDS-3UTR TCA 90 bp | GGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAATTTGGGGGTGGTAACTaGGGAAAGGCAGAAGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGRFPCKMFLHKICWLTKFGGGN*GKAEVN Trigger: ATTGACTTCTGCCTTTCCTCAGTTACCACCCCCAAA...TTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
||
| CDS-3UTR TCA 90 bp | AGGACAGACCATAGACAGAGAGGGAAGAGAATTAGACGTTCCCTTGATCCAAGCAAAGCCAATGGTCCATaGTATCACAACGAGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTDHRQRGKRIRRSLDPSKANGP*YHNEPD Trigger: ATCTGGCTCGTTGTGATATCATGGACCATTGGCTTT...GCTTGGATCAAGGGAACGTCTAATTCTCTTCCCTCTCTGTCTATGGTCTGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| CDS-3UTR GCA 90 bp | TCATTTCCACCTGAATGGAAGTGTTACCATTGCTCCACATCCTCACCAGCACGTCCTCAGTGTATAGATTaGTGGATTCAGGAGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SFPPEWKCYHCSTSSPARPQCID*WIQERC Trigger: ACACCTCTCCTGAATCCAGCAATCTATACACTGAGG...ACGTGCTGGTGAGGATGTGGAGCAATGGTAACACTTCCATTCAGGTGGAAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR GCA 90 bp | CAGACCATAGACAGAGAGGGAAGAGAATTAGACGTTCCCTTGATCCAAGCATTCCCTCAGTGTATAGATTaGTGGATTCAGGAGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: QTIDREGRELDVPLIQAFPQCID*WIQERC Trigger: ACACCTCTCCTGAATCCAGCAATCTATACACTGAGG...GAATGCTTGGATCAAGGGAACGTCTAATTCTCTTCCCTCTCTGTCTATGGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| CDS-3UTR CCA 90 bp | AATGATAAACACTGGGACCTTCAGGACAGCCCTTCAGTGTATGGTAAAGAGTTCTCATCATGTAGAGGGTaGAAAATGGCAGCAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: NDKHWDLQDSPSVYGKEFSSCRG*KMAAGA Trigger: TGCTCCTGCTGCCATTTTCCACCCTCTACATGATGA...GAACTCTTTACCATACACTGAAGGGCTGTCCTGAAGGTCCCAGTGTTTATCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CCA 90 bp | TCCATGATTAGAAACAGCTTCAGTTCAGGAGTTGAGGATATGTCTATTTCTCAGTGCACACAGAGGATCTaGCTCATGCAGCCCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SMIRNSFSSGVEDMSISQCTQRI*LMQPPK Trigger: CTTTGGGGGCTGCATGAGCCAGATCCTCTGTGTGCA...CTGAGAAATAGACATATCCTCAACTCCTGAACTGAAGCTGTTTCTAATCATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 72 bp | ACAGGGGTCTCAGGGAAGGGAACAGCAATGACAAATTaGGGATCAGGAGATTTGAAGGAAGGAGACAAGATA | + |
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Preference number: 4 (lower is better) Translates to: TGVSGKGTAMTN*GSGDLKEGDKI Trigger: TATCTTGTCTCCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAGACCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGGAAGGGAACAGCAATGACAAATTTGGGATCAGGAGATTTGAAGGAAGGGAAGCACAAAGTCCCTaGAAAATAAACTCAGACACC | + |
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Preference number: 4 (lower is better) Translates to: LREGNSNDKFGIRRFEGREAQSP*KINSDT Trigger: GGTGTCTGAGTTTATTTTTCAGGGACTTTGTGCTTC...CCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CCA 90 bp | TATTCACTCACCATTGTGACTAATGACACCCAGGTAAAATGGATATTCCCCACAGTAGAGGGTGGAAAATaGCAGCAGGAGCAAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: YSLTIVTNDTQVKWIFPTVEGGK*QQEQDL Trigger: CAGATCTTGCTCCTGCTGCCATTTTCCACCCTCTAC...TGTGGGGAATATCCATTTTACCTGGGTGTCATTAGTCACAATGGTGAGTGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| CDS-3UTR CCA 90 bp | GGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAACCAAGTGATGCTGACTaGCCACAGATAGATGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: GGRFPCKMFLHKICWLTKPSDAD*PQIDEN Trigger: ATTTTCATCTATCTGTGGCCAGTCAGCATCACTTGG...TTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 72 bp | AACATAAAACAGTCAGTTTTGAAGGACATGGACAGATaGGTGTGCCAAGGACAGACCATAGACAGAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: NIKQSVLKDMDR*VCQGQTIDREG Trigger: TCCCTCTCTGTCTATGGTCTGTCCTTGGCACACCAATCTGTCCATGTCCTTCAAAACTGACTGTTTTATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| CDS-3UTR TCA 90 bp | TCCATGATTAGAAACAGCTTCAGTTCAGGAGTTGAGGATATGTCTATTTCTCAGACTTCTGTCTGTCCATaGTGCTGCTGTAGTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SMIRNSFSSGVEDMSISQTSVCP*CCCSGV Trigger: CACTCCACTACAGCAGCATCATGGACAGACAGAAGT...CTGAGAAATAGACATATCCTCAACTCCTGAACTGAAGCTGTTTCTAATCATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR TCA 90 bp | GCATGCAAGCAGAATGTAGAAAGAGAACTCTCCAGAGAGAAAGCAGAAAATGGAAAAGCCAATGGTCCATaGTATCACAACGAGCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: ACKQNVERELSREKAENGKANGP*YHNEPD Trigger: ATCTGGCTCGTTGTGATATCATGGACCATTGGCTTT...TCCATTTTCTGCTTTCTCTCTGGAGAGTTCTCTTTCTACATTCTGCTTGCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 72 bp | CAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTaGGCTGACCAAAAACAGAGTGGTGATCTTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: QVPMQDVSTQNL*ADQKQSGDLHW Trigger: CCAGTGAAGATCACCACTCTGTTTTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR TCA 90 bp | GCATGCAAGCAGAATGTAGAAAGAGAACTCTCCAGAGAGAAAGCAGAAAATGGAGAAGCACAAAGTCCCTaGAAAATAAACTCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: ACKQNVERELSREKAENGEAQSP*KINSDT Trigger: GGTGTCTGAGTTTATTTTTCAGGGACTTTGTGCTTC...TCCATTTTCTGCTTTCTCTCTGGAGAGTTCTCTTTCTACATTCTGCTTGCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGGAAGGGAACAGCAATGACAAATTTGGGATCAGGAGATTTGAAGGAAGGACAACCACTATAATATaGGAAGTACATGTAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LREGNSNDKFGIRRFEGRTTTII*EVHVES Trigger: GCTCTCTACATGTACTTCTCATATTATAGTGGTTGT...CCTTCCTTCAAATCTCCTGATCCCAAATTTGTCATTGCTGTTCCCTTCCCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR TCA 90 bp | CAGACCATAGACAGAGAGGGAAGAGAATTAGACGTTCCCTTGATCCAAGCATTCACAACCACTATAATATaGGAAGTACATGTAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QTIDREGRELDVPLIQAFTTTII*EVHVES Trigger: GCTCTCTACATGTACTTCTCATATTATAGTGGTTGT...GAATGCTTGGATCAAGGGAACGTCTAATTCTCTTCCCTCTCTGTCTATGGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| 3UTR CAA 72 bp | AGCAGAGTGGAAAAGCTATATCAAGCAGCACACAGGTaGTCAATTAGGATCCATGATTTGACTTCGAGTACT | + |
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Preference number: 4 (lower is better) Translates to: SRVEKLYQAAHR*SIRIHDLTSST Trigger: AGTACTCGAAGTCAAATCATGGATCCTAATTGACAACCTGTGTGCTGCTTGATATAGCTTTTCCACTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 72 bp | CTGTTAGGTGTCCCACATGAAGAACATGATGTACACTaGTTACTTATGTGCCAAAGTAAGGGTCAGGAAATC | + |
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Preference number: 4 (lower is better) Translates to: LLGVPHEEHDVH*LLMCQSKGQEI Trigger: GATTTCCTGACCCTTACTTTGGCACATAAGTAACAAGTGTACATCATGTTCTTCATGTGGGACACCTAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CCA 90 bp | TTCTGCAGAAACATCTATCATACAAAGATTACCATTGTTCAGAATGGCAACATCGTAGAGGGTGGAAAATaGCAGCAGGAGCAAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: FCRNIYHTKITIVQNGNIVEGGK*QQEQDL Trigger: CAGATCTTGCTCCTGCTGCCATTTTCCACCCTCTAC...GATGTTGCCATTCTGAACAATGGTAATCTTTGTATGATAGATGTTTCTGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR TCA 90 bp | TTCTGCAGAAACATCTATCATACAAAGATTACCATTGTTCAGAATGGCAACATCTTTGGGGGTGGTAACTaGGGAAAGGCAGAAGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: FCRNIYHTKITIVQNGNIFGGGN*GKAEVN Trigger: ATTGACTTCTGCCTTTCCTCAGTTACCACCCCCAAA...GATGTTGCCATTCTGAACAATGGTAATCTTTGTATGATAGATGTTTCTGCAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CCA 90 bp | TCCATGATTAGAAACAGCTTCAGTTCAGGAGTTGAGGATATGTCTATTTCTCAGCCAAGTGATGCTGACTaGCCACAGATAGATGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SMIRNSFSSGVEDMSISQPSDAD*PQIDEN Trigger: ATTTTCATCTATCTGTGGCCAGTCAGCATCACTTGG...CTGAGAAATAGACATATCCTCAACTCCTGAACTGAAGCTGTTTCTAATCATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 72 bp | TTGAGCAAGTGTCTGTATGTTATGGTGAAGCATCATTaGGATATATGCTCCAGGAGTGATATAGCTAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LSKCLYVMVKHH*DICSRSDIARS Trigger: AGACCTAGCTATATCACTCCTGGAGCATATATCCAAATGATGCTTCACCATAACATACAGACACTTGCTCAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR GCA 90 bp | CTGAGAACAAAGGGCAGAGATAAGTCCTCCTCCCTTTTCCTACTGATTTCTTTAGAGTATCAGTATTCATaGAGGCTAATTTCATCACTA | + |
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Preference number: 4 (lower is better) Translates to: LRTKGRDKSSSLFLLISLEYQYS*RLISSL Trigger: TAGTGATGAAATTAGCCTGCATGAATACTGATACTC...TAAAGAAATCAGTAGGAAAAGGGAGGAGGACTTATCTCTGCCCTTTGTTCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 72 bp | CTCAGGTTAGTTGATTCTGTAGGTTTTCTTGTGGTTTaGTCCTTGACCTTTCTTAAGCCTTTAATCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LRLVDSVGFLVV*SLTFLKPLILS Trigger: AGAAAGGATTAAAGGCTTAAGAAAGGTCAAGGACAAAACCACAAGAAAACCTACAGAATCAACTAACCTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 72 bp | ATTTATTCTCTGCTGGCCCAAATCTTTGTAATAATCTaGGAAAGTGCTACCTACGTGCTTCCATCTTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: IYSLLAQIFVII*ESATYVLPSFK Trigger: CTTAAAAGATGGAAGCACGTAGGTAGCACTTTCCAAGATTATTACAAAGATTTGGGCCAGCAGAGAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219291.2 |
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| 3UTR CAA 72 bp | AAACTTGTAACAAATGGTCAATGTTTAGCCAGATATTaGCTCTCAGTGTATATGCATGTAGGCATTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: KLVTNGQCLARY*LSVYMHVGILC Trigger: ACAGAGAATGCCTACATGCATATACACTGAGAGCAAATATCTGGCTAAACATTGACCATTTGTTACAAGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| 3UTR CAA 72 bp | TATTCTGCAGAAACATCTATCATACAAAGATTACCATaGTTCAGAATGGCAACATCCACAGAGACATTGGAA | + |
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Preference number: 4 (lower is better) Translates to: YSAETSIIQRLP*FRMATSTETLE Trigger: TTCCAATGTCTCTGTGGATGTTGCCATTCTGAACAATGGTAATCTTTGTATGATAGATGTTTCTGCAGAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CAA 90 bp | TCATTTCCACCTGAATGGAAGTGTTACCATTGCTCCACATCCTCACCAGCACGTTCCTCAGTGTATAGATaGCTGGATTCAGGAGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SFPPEWKCYHCSTSSPARSSVYR*LDSGEV Trigger: CACCTCTCCTGAATCCAGCAATCTATACACTGAGGA...ACGTGCTGGTGAGGATGTGGAGCAATGGTAACACTTCCATTCAGGTGGAAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS CCA 90 bp | ATATCACTACAAAGAGGTTGCCTACCACAGTCATCATGTAGAGGGTaGAAAATGGCAGCAGGAGCAAGATCTGTAGTTCCTTTGAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: ISLQRGCLPQSSCRG*KMAAGARSVVPLKH Trigger: GTGCTTCAAAGGAACTACAGATCTTGCTCCTGCTGCCATTTTCCACCCTCTACATGATGACTGTGGTAGGCAACCTCTTTGTAGTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082167.5 ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CAA 90 bp | AATGATAAACACTGGGACCTTCAGGACAGCCCTTCAGTGTATGGTAAAGAGTTCTCCTCAGTGTATAGATaGCTGGATTCAGGAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NDKHWDLQDSPSVYGKEFSSVYR*LDSGEV Trigger: CACCTCTCCTGAATCCAGCAATCTATACACTGAGGA...GAACTCTTTACCATACACTGAAGGGCTGTCCTGAAGGTCCCAGTGTTTATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CAA 90 bp | GGCGGCAGGTTCCCATGCAAGATGTTTCTACACAAAATTTGTTGGCTGACCAAAAGATCTGTAGTTCCTTaGAAGCACAAAGTCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGRFPCKMFLHKICWLTKRSVVP*KHKVPE Trigger: TTCAGGGACTTTGTGCTTCAAAGGAACTACAGATCT...TTTGGTCAGCCAACAAATTTTGTGTAGAAACATCTTGCATGGGAACCTGCCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CAA 90 bp | AATGATAAACACTGGGACCTTCAGGACAGCCCTTCAGTGTATGGTAAAGAGTTCATCACTACAAAGAGGTaGCCTACCACAGTCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: NDKHWDLQDSPSVYGKEFITTKR*PTTVIM Trigger: CATGATGACTGTGGTAGGCAACCTCTTTGTAGTGAT...GAACTCTTTACCATACACTGAAGGGCTGTCCTGAAGGTCCCAGTGTTTATCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CAA 90 bp | GCATGCAAGCAGAATGTAGAAAGAGAACTCTCCAGAGAGAAAGCAGAAAATGGAAACACAGCTAGAAACTaGTCCACCCAAGTGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ACKQNVERELSREKAENGNTARN*STQVML Trigger: CAGCATCACTTGGGTGGACAAGTTTCTAGCTGTGTT...TCCATTTTCTGCTTTCTCTCTGGAGAGTTCTCTTTCTACATTCTGCTTGCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CAA 90 bp | CTGAGAACAAAGGGCAGAGATAAGTCCTCCTCCCTTTTCCTACTGATTTCTTTAAACACAGCTAGAAACTaGTCCACCCAAGTGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRTKGRDKSSSLFLLISLNTARN*STQVML Trigger: CAGCATCACTTGGGTGGACAAGTTTCTAGCTGTGTT...TAAAGAAATCAGTAGGAAAAGGGAGGAGGACTTATCTCTGCCCTTTGTTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CAA 90 bp | AATGATAAACACTGGGACCTTCAGGACAGCCCTTCAGTGTATGGTAAAGAGTTCAGATCTGTAGTTCCTTaGAAGCACAAAGTCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NDKHWDLQDSPSVYGKEFRSVVP*KHKVPE Trigger: TTCAGGGACTTTGTGCTTCAAAGGAACTACAGATCT...GAACTCTTTACCATACACTGAAGGGCTGTCCTGAAGGTCCCAGTGTTTATCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CAA 90 bp | GCATGCAAGCAGAATGTAGAAAGAGAACTCTCCAGAGAGAAAGCAGAAAATGGAATCACTACAAAGAGGTaGCCTACCACAGTCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: ACKQNVERELSREKAENGITTKR*PTTVIM Trigger: CATGATGACTGTGGTAGGCAACCTCTTTGTAGTGAT...TCCATTTTCTGCTTTCTCTCTGGAGAGTTCTCTTTCTACATTCTGCTTGCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS-3UTR CAA 90 bp | TCCATGATTAGAAACAGCTTCAGTTCAGGAGTTGAGGATATGTCTATTTCTCAGAGGTCAGTTATCAGTTaGGGGGTGGTAACTGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SMIRNSFSSGVEDMSISQRSVIS*GVVTEE Trigger: TTCCTCAGTTACCACCCCCAAACTGATAACTGACCT...CTGAGAAATAGACATATCCTCAACTCCTGAACTGAAGCTGTTTCTAATCATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213551.2 ENSMUST00000219291.2 |
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| CDS TCA 72 bp | AGCAAGATCTGTAGTTCCTTTGAAGCACAAAGTCCCTaGAAAATAAACTCAGACACCACAGTCTGGTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SKICSSFEAQSP*KINSDTTVWFA Trigger: AGCAAACCAGACTGTGGTGTCTGAGTTTATTTTTCAGGGACTTTGTGCTTCAAAGGAACTACAGATCTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082167.5 ENSMUST00000213551.2 ENSMUST00000219291.2 |
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