Pregenerated sensors for OLFR1279 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000109813Ensembl transcript IDs: ENSMUST00000090329.2, ENSMUST00000213823.2, ENSMUST00000216697.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGGGACTGAGATTTCCTGCTTGCTTCTAGCTGCAGAGCCCATCTaGGGACTGACCCTGTCCTGTGTGCACATTCGGGATGGAGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: TGTEISCLLLAAEPI*GLTLSCVHIRDGAL Trigger: CAGAGCTCCATCCCGAATGTGCACACAGGACAGGGTCAGTCCTCAGATGGGCTCTGCAGCTAGAAGCAAGCAGGAAATCTCAGTCCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CCA 90 bp | GACACACCTCACGGGTGGCCTCACCTAGACAGCTTTTGGAAAGTGTaGATTGGAGACAGCCCCACTCTGCTTCTGGTAAGATACTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: DTPHGWPHLDSFWKV*IGDSPTLLLVRYCL Trigger: GAGGCAGTATCTTACCAGAAGCAGAGTGGGGCTGTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR TCA 90 bp | AGAATTCTGCCAACGGAAACAACAGTGGACGATGGCAACTGGGACTaGGATTTCCTGCTTGCTTCTAGCTGCAGAGCCCATCTGAGGACT | + |
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Preference number: 1 (lower is better) Translates to: RILPTETTVDDGNWD*DFLLASSCRAHLRT Trigger: AGTCCTCAGATGGGCTCTGCAGCTAGAAGCAAGCAGGAAATCTCAGTCCCAGTTGCCATCGTCCACTGTTGTTTCCGTTGGCAGAATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CCA 90 bp | GGGGAACTGATTGAACTTTCAGAATTCTGCCAACGGAAACAACAGTaGACGATGGCAACTGGGACTGAGATTTCCTGCTTGCTTCTAGCT | + |
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Preference number: 1 (lower is better) Translates to: GELIELSEFCQRKQQ*TMATGTEISCLLLA Trigger: AGCTAGAAGCAAGCAGGAAATCTCAGTCCCAGTTGCCATCGTCCACTGTTGTTTCCGTTGGCAGAATTCTGAAAGTTCAATCAGTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CCA 90 bp | AATGCTTTTTCTAAACAGTCTGTTTCTCATGACACACCTCACGGGTaGCCTCACCTAGACAGCTTTTGGAAAGTGTGGATTGGAGACAGC | + |
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Preference number: 1 (lower is better) Translates to: NAFSKQSVSHDTPHG*PHLDSFWKVWIGDS Trigger: GCTGTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGTGTCATGAGAAACAGACTGTTTAGAAAAAGCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR GCA 90 bp | AGCCCCACTCTGCTTCTGGTAAGATACTGCCTCAGTTTCAGAGCTTaGCTATACTTATCAACTGGTGCTATGTATTCCTCAAAATGCCAA | + |
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Preference number: 1 (lower is better) Translates to: SPTLLLVRYCLSFRA*LYLSTGAMYSSKCQ Trigger: TTGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTATAGGCAAGCTCTGAAACTGAGGCAGTATCTTACCAGAAGCAGAGTGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR GCA 90 bp | AGAGCTTGCCTATACTTATCAACTGGTGCTATGTATTCCTCAAAATaGCAAGATTACAAACTCTGCAAGTTTCACGGGCCTTTGAATCCT | + |
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Preference number: 1 (lower is better) Translates to: RACLYLSTGAMYSSK*QDYKLCKFHGPLNP Trigger: AGGATTCAAAGGCCCGTGAAACTTGCAGAGTTTGTAATCTTGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTATAGGCAAGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CCA 90 bp | TGCCTGAAGTGTGGTTTGAGACATGTATGTTTATACTGTAAGCAATaGAAGACACTAGGTTTTGTCACCTGCTGCTGTATTTGGAAACAA | + |
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Preference number: 1 (lower is better) Translates to: CLKCGLRHVCLYCKQ*KTLGFVTCCCIWKQ Trigger: TTGTTTCCAAATACAGCAGCAGGTGACAAAACCTAGTGTCTTCCATTGCTTACAGTATAAACATACATGTCTCAAACCACACTTCAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR TCA 90 bp | TGTGATGATTCATTTACTCACCCAAACAAATCCGGAGTTCATTTCTaGACACGAAGGACTGATACTACGTCTTCATTGTGTTCAAATTAT | + |
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Preference number: 1 (lower is better) Translates to: CDDSFTHPNKSGVHF*TRRTDTTSSLCSNY Trigger: ATAATTTGAACACAATGAAGACGTAGTATCAGTCCTTCGTGTTCAGAAATGAACTCCGGATTTGTTTGGGTGAGTAAATGAATCATCACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR GCA 90 bp | TGTTTATACTGTAAGCAATGGAAGACACTAGGTTTTGTCACCTGCTaGTGTATTTGGAAACAAAGACAAATGTTGCCTGAAGAAGTAATT | + |
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Preference number: 1 (lower is better) Translates to: CLYCKQWKTLGFVTC*CIWKQRQMLPEEVI Trigger: AATTACTTCTTCAGGCAACATTTGTCTTTGTTTCCAAATACAGCAGCAGGTGACAAAACCTAGTGTCTTCCATTGCTTACAGTATAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTAGACAGCTTTTGGAAAGTGTGGATTGGAGACAGCCCCACTCTGCTTCTGGCTGCAGAGCCCATCTaGGGACTGACCCTGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: HLDSFWKVWIGDSPTLLLAAEPI*GLTLSC Trigger: ACAGGACAGGGTCAGTCCTCAGATGGGCTCTGCAGC...CAGAAGCAGAGTGGGGCTGTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR CCA 90 bp | ACACCTCACGGGTGGCCTCACCTAGACAGCTTTTGGAAAGTGTGGATTGGAGACTTCGGGATGGAGCTCTaGTCCCTGTGCTCAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: TPHGWPHLDSFWKVWIGDFGMEL*SLCSRS Trigger: GCTCCTTGAGCACAGGGACCAGAGCTCCATCCCGAA...GTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR TCA 90 bp | ACACCTCACGGGTGGCCTCACCTAGACAGCTTTTGGAAAGTGTGGATTGGAGACGATGGCAACTGGGACTaGGATTTCCTGCTTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: TPHGWPHLDSFWKVWIGDDGNWD*DFLLAS Trigger: AGAAGCAAGCAGGAAATCTCAGTCCCAGTTGCCATC...GTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR TCA 90 bp | ACACCTCACGGGTGGCCTCACCTAGACAGCTTTTGGAAAGTGTGGATTGGAGACAGTTTCACGGGCCTTTaGATCCTTCCAGCGTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: TPHGWPHLDSFWKVWIGDSFTGL*ILPAFR Trigger: TCTAAACGCTGGAAGGATTCAAAGGCCCGTGAAACT...GTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTGTGCACATTCGGGATGGAGCTCTGGTCCCTGTGCTCAAGGAGCTTCCTGGTTTTGTCACCTGCTaGTGTATTTGGAAACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: SCVHIRDGALVPVLKELPGFVTC*CIWKQR Trigger: TCTTTGTTTCCAAATACAGCAGCAGGTGACAAAACC...AGGAAGCTCCTTGAGCACAGGGACCAGAGCTCCATCCCGAATGTGCACACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTTTCTCATGACACACCTCACGGGTGGCCTCACCTAGACAGCTTTTGGAAAGGGACTGAGATTTCCTaGTTGCTTCTAGCTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SVSHDTPHGWPHLDSFWKGTEIS*LLLAAE Trigger: CTCTGCAGCTAGAAGCAAGCAGGAAATCTCAGTCCC...TTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGTGTCATGAGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | ACACCTCACGGGTGGCCTCACCTAGACAGCTTTTGGAAAGTGTGGATTGGAGACCTAGGTTTTGTCACCTaGTGCTGTATTTGGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: TPHGWPHLDSFWKVWIGDLGFVT*CCIWKQ Trigger: TTGTTTCCAAATACAGCAGCAGGTGACAAAACCTAG...GTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | ACACCTCACGGGTGGCCTCACCTAGACAGCTTTTGGAAAGTGTGGATTGGAGACTGTAGTGTTCATCAGTaGAACTATTCAAGTGTACAC | + |
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Preference number: 2 (lower is better) Translates to: TPHGWPHLDSFWKVWIGDCSVHQ*NYSSVH Trigger: GTGTACACTTGAATAGTTGCACTGATGAACACTACA...GTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGAGCTTGCCTATACTTATCAACTGGTGCTATGTATTCCTCAAAATGCCAGAGCTCTGGTCCCTGTaGTCAAGGAGCTTCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: FQSLPILINWCYVFLKMPELWSL*SRSFLV Trigger: CACCAGGAAGCTCCTTGAGCACAGGGACCAGAGCTC...TGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTATAGGCAAGCTCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CAA 90 bp | CAGCCCCACTCTGCTTCTGGTAAGATACTGCCTCAGTTTCAGAGCTaGCCTATACTTATCAACTGGTGCTATGTATTCCTCAAAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: QPHSASGKILPQFQS*PILINWCYVFLKMP Trigger: TGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTATAGGCAAGCTCTGAAACTGAGGCAGTATCTTACCAGAAGCAGAGTGGGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTTTCTCATGACACACCTCACGGGTGGCCTCACCTAGACAGCTTTTGGAAAGGTTTTGTCACCTGCTaGTGTATTTGGAAACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: SVSHDTPHGWPHLDSFWKGFVTC*CIWKQR Trigger: TCTTTGTTTCCAAATACAGCAGCAGGTGACAAAACC...TTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGTGTCATGAGAAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAACTGGTGCTATGTATTCCTCAAAATGCCAAGATTACAAACTCTGCAAGTTGAGCTCTGGTCCCTGTaGTCAAGGAGCTTCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: INWCYVFLKMPRLQTLQVELWSL*SRSFLV Trigger: CACCAGGAAGCTCCTTGAGCACAGGGACCAGAGCTC...AACTTGCAGAGTTTGTAATCTTGGCATTTTGAGGAATACATAGCACCAGTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAACTGGTGCTATGTATTCCTCAAAATGCCAAGATTACAAACTCTGCAAGTTTTCGGGATGGAGCTCTaGTCCCTGTGCTCAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: INWCYVFLKMPRLQTLQVFGMEL*SLCSRS Trigger: GCTCCTTGAGCACAGGGACCAGAGCTCCATCCCGAA...AACTTGCAGAGTTTGTAATCTTGGCATTTTGAGGAATACATAGCACCAGTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | CACCTAGACAGCTTTTGGAAAGTGTGGATTGGAGACAGCCCCACTCTGCTTCTGATGTATTCCTCAAAATaGCAAGATTACAAACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: HLDSFWKVWIGDSPTLLLMYSSK*QDYKLC Trigger: GCAGAGTTTGTAATCTTGGCATTTTGAGGAATACAT...CAGAAGCAGAGTGGGGCTGTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTAGACAGCTTTTGGAAAGTGTGGATTGGAGACAGCCCCACTCTGCTTCTGCCTATACTTATCAACTaGTGCTATGTATTCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: HLDSFWKVWIGDSPTLLLPILIN*CYVFLK Trigger: TTTGAGGAATACATAGCACCAGTTGATAAGTATAGG...CAGAAGCAGAGTGGGGCTGTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCCAAGATTACAAACTCTGCAAGTTTCACGGGCCTTTGAATCCTTCCAGCGTCTAGGTTTTGTCACCTaGTGCTGTATTTGGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: MPRLQTLQVSRAFESFQRLGFVT*CCIWKQ Trigger: TTGTTTCCAAATACAGCAGCAGGTGACAAAACCTAG...ACGCTGGAAGGATTCAAAGGCCCGTGAAACTTGCAGAGTTTGTAATCTTGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAAATACCTGGAGACACTAGTGCTAAATACAGAACAACTTATTGTGATGATTTGGAAAGTGTGGATTaGAGACAGCCCCACTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: AQIPGDTSAKYRTTYCDDLESVD*RQPHSA Trigger: AGCAGAGTGGGGCTGTCTCCAATCCACACTTTCCAA...ATCATCACAATAAGTTGTTCTGTATTTAGCACTAGTGTCTCCAGGTATTTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGAGCTTGCCTATACTTATCAACTGGTGCTATGTATTCCTCAAAATGCCAAGTTTCACGGGCCTTTaGATCCTTCCAGCGTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: FQSLPILINWCYVFLKMPSFTGL*ILPAFR Trigger: TCTAAACGCTGGAAGGATTCAAAGGCCCGTGAAACT...TGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTATAGGCAAGCTCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | ATACTTATCAACTGGTGCTATGTATTCCTCAAAATGCCAAGATTACAAACTCTGGGGACTGAGATTTCCTaGTTGCTTCTAGCTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ILINWCYVFLKMPRLQTLGTEIS*LLLAAE Trigger: CTCTGCAGCTAGAAGCAAGCAGGAAATCTCAGTCCC...CAGAGTTTGTAATCTTGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAAAATGCCAAGATTACAAACTCTGCAAGTTTCACGGGCCTTTGAATCCTTCCATTTTAAGTTAAGCTaGCTGAAGTGTGGTTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LKMPRLQTLQVSRAFESFHFKLS*LKCGLR Trigger: TCTCAAACCACACTTCAGGCAGCTTAACTTAAAATG...GAAGGATTCAAAGGCCCGTGAAACTTGCAGAGTTTGTAATCTTGGCATTTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR CCA 90 bp | ATACTTATCAACTGGTGCTATGTATTCCTCAAAATGCCAAGATTACAAACTCTGTGTTTCCCATTTATCTaGATAAAGGTCCAGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: ILINWCYVFLKMPRLQTLCFPFI*IKVQLP Trigger: TGGCAGCTGGACCTTTATCCAGATAAATGGGAAACA...CAGAGTTTGTAATCTTGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGAGCTTGCCTATACTTATCAACTGGTGCTATGTATTCCTCAAAATGCCATTATACTGTAAGCAATaGAAGACACTAGGTTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: FQSLPILINWCYVFLKMPLYCKQ*KTLGFV Trigger: GACAAAACCTAGTGTCTTCCATTGCTTACAGTATAA...TGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTATAGGCAAGCTCTGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CAA 90 bp | ATTTTACAGTCTATGCATTTTAAGTTAAGCTGCCTGAAGTGTGGTTaGAGACATGTATGTTTATACTGTAAGCAATGGAAGACACTAGGT | + |
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Preference number: 2 (lower is better) Translates to: ILQSMHFKLSCLKCG*RHVCLYCKQWKTLG Trigger: ACCTAGTGTCTTCCATTGCTTACAGTATAAACATACATGTCTCAAACCACACTTCAGGCAGCTTAACTTAAAATGCATAGACTGTAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR GCA 90 bp | ATACTTATCAACTGGTGCTATGTATTCCTCAAAATGCCAAGATTACAAACTCTGTGTAGTGTTCATCAGTaGAACTATTCAAGTGTACAC | + |
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Preference number: 2 (lower is better) Translates to: ILINWCYVFLKMPRLQTLCSVHQ*NYSSVH Trigger: GTGTACACTTGAATAGTTGCACTGATGAACACTACA...CAGAGTTTGTAATCTTGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CCA 72 bp | GGATGGAGCTCTGGTCCCTGTGCTCAAGGAGCTTCCTaGTGGGGCCACAGGTACAGCCACCAGAGGAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: GWSSGPCAQGAS*WGHRYSHQRKG Trigger: CCCTTTCCTCTGGTGGCTGTACCTGTGGCCCCACCAGGAAGCTCCTTGAGCACAGGGACCAGAGCTCCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR GCA 72 bp | CCTGTGTGCACATTCGGGATGGAGCTCTGGTCCCTGTaGTCAAGGAGCTTCCTGGTGGGGCCACAGGTACAG | + |
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Preference number: 3 (lower is better) Translates to: PVCTFGMELWSL*SRSFLVGPQVQ Trigger: CTGTACCTGTGGCCCCACCAGGAAGCTCCTTGAGCACAGGGACCAGAGCTCCATCCCGAATGTGCACACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CCA 72 bp | TGGAGCTCTGGTCCCTGTGCTCAAGGAGCTTCCTGGTaGGGCCACAGGTACAGCCACCAGAGGAAAGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: WSSGPCAQGASW*GHRYSHQRKGD Trigger: ATCCCCTTTCCTCTGGTGGCTGTACCTGTGGCCCCACCAGGAAGCTCCTTGAGCACAGGGACCAGAGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CCA 72 bp | CTGAGGACTGACCCTGTCCTGTGTGCACATTCGGGATaGAGCTCTGGTCCCTGTGCTCAAGGAGCTTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: LRTDPVLCAHSG*SSGPCAQGASW Trigger: CCAGGAAGCTCCTTGAGCACAGGGACCAGAGCTCCATCCCGAATGTGCACACAGGACAGGGTCAGTCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTGTGTGCACATTCGGGATGGAGCTCTGGTCCCTGTGCTCAAGGAGCTTCCTTTGATATCCCAGCACTaGGGAGGCAGAGGCAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: SCVHIRDGALVPVLKELPLISQH*GGRGSQ Trigger: CTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAA...AGGAAGCTCCTTGAGCACAGGGACCAGAGCTCCATCCCGAATGTGCACACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CCA 72 bp | GACACACCTCACGGGTGGCCTCACCTAGACAGCTTTTaGAAAGTGTGGATTGGAGACAGCCCCACTCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: DTPHGWPHLDSF*KVWIGDSPTLL Trigger: AAGCAGAGTGGGGCTGTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR TCA 72 bp | GAGATTTCCTGCTTGCTTCTAGCTGCAGAGCCCATCTaGGGACTGACCCTGTCCTGTGTGCACATTCGGGAT | + |
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Preference number: 3 (lower is better) Translates to: EISCLLLAAEPI*GLTLSCVHIRD Trigger: ATCCCGAATGTGCACACAGGACAGGGTCAGTCCTCAGATGGGCTCTGCAGCTAGAAGCAAGCAGGAAATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CCA 72 bp | CACGGGTGGCCTCACCTAGACAGCTTTTGGAAAGTGTaGATTGGAGACAGCCCCACTCTGCTTCTGGTAAGA | + |
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Preference number: 3 (lower is better) Translates to: HGWPHLDSFWKV*IGDSPTLLLVR Trigger: TCTTACCAGAAGCAGAGTGGGGCTGTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR-3UTR CAA 90 bp | ACACCTCACGGGTGGCCTCACCTAGACAGCTTTTGGAAAGTGTGGATTGGAGACACTGAGATTTCCTGCTaGCTTCTAGCTGCAGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: TPHGWPHLDSFWKVWIGDTEISC*LLAAEP Trigger: GGGCTCTGCAGCTAGAAGCAAGCAGGAAATCTCAGT...GTCTCCAATCCACACTTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR TCA 72 bp | CCAACGGAAACAACAGTGGACGATGGCAACTGGGACTaGGATTTCCTGCTTGCTTCTAGCTGCAGAGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: PTETTVDDGNWD*DFLLASSCRAH Trigger: ATGGGCTCTGCAGCTAGAAGCAAGCAGGAAATCTCAGTCCCAGTTGCCATCGTCCACTGTTGTTTCCGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
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| 3UTR CCA 72 bp | TCTAAACAGTCTGTTTCTCATGACACACCTCACGGGTaGCCTCACCTAGACAGCTTTTGGAAAGTGTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: SKQSVSHDTPHG*PHLDSFWKVWI Trigger: AATCCACACTTTCCAAAAGCTGTCTAGGTGAGGCCACCCGTGAGGTGTGTCATGAGAAACAGACTGTTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR CCA 72 bp | ATTGAACTTTCAGAATTCTGCCAACGGAAACAACAGTaGACGATGGCAACTGGGACTGAGATTTCCTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: IELSEFCQRKQQ*TMATGTEISCL Trigger: CAAGCAGGAAATCTCAGTCCCAGTTGCCATCGTCCACTGTTGTTTCCGTTGGCAGAATTCTGAAAGTTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCAAATACCTGGAGACACTAGTGCTAAATACAGAACAACTTATTGTGATGATACTGAGATTTCCTGCTaGCTTCTAGCTGCAGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: AQIPGDTSAKYRTTYCDDTEISC*LLAAEP Trigger: GGGCTCTGCAGCTAGAAGCAAGCAGGAAATCTCAGT...ATCATCACAATAAGTTGTTCTGTATTTAGCACTAGTGTCTCCAGGTATTTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCAACTGGTGCTATGTATTCCTCAAAATGCCAAGATTACAAACTCTGCAAGTTGTGGTGTTGCATGCCTaGATATCCCAGCACTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: INWCYVFLKMPRLQTLQVVVLHA*ISQHLG Trigger: TCCCAAGTGCTGGGATATCAAGGCATGCAACACCAC...AACTTGCAGAGTTTGTAATCTTGGCATTTTGAGGAATACATAGCACCAGTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR GCA 72 bp | CTGCTTCTGGTAAGATACTGCCTCAGTTTCAGAGCTTaGCTATACTTATCAACTGGTGCTATGTATTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLLVRYCLSFRA*LYLSTGAMYSS Trigger: TGAGGAATACATAGCACCAGTTGATAAGTATAGGCAAGCTCTGAAACTGAGGCAGTATCTTACCAGAAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR GCA 72 bp | CTATACTTATCAACTGGTGCTATGTATTCCTCAAAATaGCAAGATTACAAACTCTGCAAGTTTCACGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LYLSTGAMYSSK*QDYKLCKFHGP Trigger: AGGCCCGTGAAACTTGCAGAGTTTGTAATCTTGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR CCA 72 bp | TGTGGTTTGAGACATGTATGTTTATACTGTAAGCAATaGAAGACACTAGGTTTTGTCACCTGCTGCTGTATT | + |
|
Preference number: 3 (lower is better) Translates to: CGLRHVCLYCKQ*KTLGFVTCCCI Trigger: AATACAGCAGCAGGTGACAAAACCTAGTGTCTTCCATTGCTTACAGTATAAACATACATGTCTCAAACCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR TCA 72 bp | AAACAAATCCGGAGTTCATTTCTGAACACGAAGGACTaGTACTACGTCTTCATTGTGTTCAAATTATTACCA | + |
|
Preference number: 3 (lower is better) Translates to: KQIRSSFLNTKD*YYVFIVFKLLP Trigger: TGGTAATAATTTGAACACAATGAAGACGTAGTATCAGTCCTTCGTGTTCAGAAATGAACTCCGGATTTGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGTGTGCACATTCGGGATGGAGCTCTGGTCCCTGTGCTCAAGGAGCTTCCTACAACCACAGTGATGTaGGCTGACAGAGTGACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCVHIRDGALVPVLKELPTTTVM*ADRVTS Trigger: GCTTGTCACTCTGTCAGCTCACATCACTGTGGTTGT...AGGAAGCTCCTTGAGCACAGGGACCAGAGCTCCATCCCGAATGTGCACACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGTGTGCACATTCGGGATGGAGCTCTGGTCCCTGTGCTCAAGGAGCTTCCTTCCCCTGAAGACCTTTaGCAGACTGTGACCAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SCVHIRDGALVPVLKELPSPEDL*QTVTKM Trigger: CATTTTGGTCACAGTCTGGCAAAGGTCTTCAGGGGA...AGGAAGCTCCTTGAGCACAGGGACCAGAGCTCCATCCCGAATGTGCACACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGTTGCATGCCTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATTGTCGATCGATGATGTaGGGAAAGGCCACACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGVACLDIPALGRQRQSDCRSMM*GKATHR Trigger: TCTATGTGTGGCCTTTCCCCACATCATCGATCGACA...ATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAAGGCATGCAACACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR CAA 72 bp | AATATCTTTCATGAGCCGCATGTGGTGTTGCATGCCTaGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NIFHEPHVVLHA*ISQHLGGRGSQ Trigger: CTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAAGGCATGCAACACCACATGCGGCTCATGAAAGATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGTGTTGCATGCCTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTTCAGAAGATCTaGGATCATCTTGGGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGVACLDIPALGRQRQSDLFQKI*DHLGNC Trigger: ACAGTTCCCAAGATGATCTCAGATCTTCTGAAAGAG...ATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAAGGCATGCAACACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR TCA 90 bp | TACACTGTAACAGGATTGTTTCCCATTTATCTGGATAAAGGTCCAGCTGCCACTAGGTCCCCATGCTCATaGAGCCACTGTTGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YTVTGLFPIYLDKGPAATRSPCS*SHCWQQ Trigger: TTGCTGCCAACAGTGGCTTCATGAGCATGGGGACCT...AGTGGCAGCTGGACCTTTATCCAGATAAATGGGAAACAATCCTGTTACAGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAGATTACAAACTCTGCAAGTTTCACGGGCCTTTGAATCCTTCCAGCGTTCCCCTGAAGACCTTTaGCAGACTGTGACCAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: MPRLQTLQVSRAFESFQRSPEDL*QTVTKM Trigger: CATTTTGGTCACAGTCTGGCAAAGGTCTTCAGGGGA...ACGCTGGAAGGATTCAAAGGCCCGTGAAACTTGCAGAGTTTGTAATCTTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGATCTCTTAAGTTCAAGGACAGCTTGGTCTAAAGAGAATTACAGGGCAACAACCACAGTGATGTaGGCTGACAGAGTGACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSDLLSSRTAWSKENYRATTTVM*ADRVTS Trigger: GCTTGTCACTCTGTCAGCTCACATCACTGTGGTTGT...TGCCCTGTAATTCTCTTTAGACCAAGCTGTCCTTGAACTTAAGAGATCTGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAAGATTACAAACTCTGCAAGTTTCACGGGCCTTTGAATCCTTCCAGCGTCTCTTTCAGAAGATCTaGGATCATCTTGGGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: MPRLQTLQVSRAFESFQRLFQKI*DHLGNC Trigger: ACAGTTCCCAAGATGATCTCAGATCTTCTGAAAGAG...ACGCTGGAAGGATTCAAAGGCCCGTGAAACTTGCAGAGTTTGTAATCTTGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR CAA 72 bp | GGAATGCATATAGGTTGTGAGGTAGATAAGGTGCAGTaGGCAAGGTTATATAGAATGTGTCTCAGTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GMHIGCEVDKVQ*ARLYRMCLSGT Trigger: GGTTCCACTGAGACACATTCTATATAACCTTGCCAACTGCACCTTATCTACCTCACAACCTATATGCATTCC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR CAA 72 bp | TCTGCTTCTGGTAAGATACTGCCTCAGTTTCAGAGCTaGCCTATACTTATCAACTGGTGCTATGTATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SASGKILPQFQS*PILINWCYVFL Trigger: GAGGAATACATAGCACCAGTTGATAAGTATAGGCAAGCTCTGAAACTGAGGCAGTATCTTACCAGAAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAAATACCTGGAGACACTAGTGCTAAATACAGAACAACTTATTGTGATGATTGTCGATCGATGATGTaGGGAAAGGCCACACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQIPGDTSAKYRTTYCDDCRSMM*GKATHR Trigger: TCTATGTGTGGCCTTTCCCCACATCATCGATCGACA...ATCATCACAATAAGTTGTTCTGTATTTAGCACTAGTGTCTCCAGGTATTTGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR CAA 72 bp | ATCAGTGCAACTATTCAAGTGTACACTGTAACAGGATaGTTTCCCATTTATCTGGATAAAGGTCCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISATIQVYTVTG*FPIYLDKGPAA Trigger: GGCAGCTGGACCTTTATCCAGATAAATGGGAAACAATCCTGTTACAGTGTACACTTGAATAGTTGCACTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR TCA 90 bp | TACACTGTAACAGGATTGTTTCCCATTTATCTGGATAAAGGTCCAGCTGCCACTGCCAGCAATTACAAATaGAATGCATATTCTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTVTGLFPIYLDKGPAATASNYK*NAYSRA Trigger: AGCCCTAGAATATGCATTTCATTTGTAATTGCTGGC...AGTGGCAGCTGGACCTTTATCCAGATAAATGGGAAACAATCCTGTTACAGTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAAATGCCAAGATTACAAACTCTGCAAGTTTCACGGGCCTTTGAATCCTTCGCCAGCAATTACAAATaGAATGCATATTCTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKMPRLQTLQVSRAFESFASNYK*NAYSRA Trigger: AGCCCTAGAATATGCATTTCATTTGTAATTGCTGGC...GAAGGATTCAAAGGCCCGTGAAACTTGCAGAGTTTGTAATCTTGGCATTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| 3UTR CAA 72 bp | TCTATGCATTTTAAGTTAAGCTGCCTGAAGTGTGGTTaGAGACATGTATGTTTATACTGTAAGCAATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SMHFKLSCLKCG*RHVCLYCKQWK Trigger: CTTCCATTGCTTACAGTATAAACATACATGTCTCAAACCACACTTCAGGCAGCTTAACTTAAAATGCATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTGCACATTCGGGATGGAGCTCTGGTCCCTGTGCTCAAGGAGCTTCCTGGTTCGTTCAAAGACAGGTaGGCCAACAGGAAGTACATA | + |
|
Preference number: 5 (lower is better) Translates to: CVHIRDGALVPVLKELPGSFKDR*ANRKYI Trigger: TATGTACTTCCTGTTGGCCAACCTGTCTTTGAACGA...ACCAGGAAGCTCCTTGAGCACAGGGACCAGAGCTCCATCCCGAATGTGCACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS CCA 90 bp | CCACAAAAAGGCAGGCTCACAACAAAAGAGAACTGTGACATGGCATaGACCACTCCAGTGACCCAGCCAGCAATTACAAATGAAATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PQKGRLTTKENCDMA*TTPVTQPAITNEMH Trigger: ATGCATTTCATTTGTAATTGCTGGCTGGGTCACTGGAGTGGTCCATGCCATGTCACAGTTCTCTTTTGTTGTGAGCCTGCCTTTTTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090329.2 ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR CAA 90 bp | TACACTGTAACAGGATTGTTTCCCATTTATCTGGATAAAGGTCCAGCTGCCACTTCGTTCAAAGACAGGTaGGCCAACAGGAAGTACATA | + |
|
Preference number: 5 (lower is better) Translates to: YTVTGLFPIYLDKGPAATSFKDR*ANRKYI Trigger: TATGTACTTCCTGTTGGCCAACCTGTCTTTGAACGA...AGTGGCAGCTGGACCTTTATCCAGATAAATGGGAAACAATCCTGTTACAGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTCAGAGCTTGCCTATACTTATCAACTGGTGCTATGTATTCCTCAAAATGCCTCATGAAGCCACTGTaGGCAGCAACAACAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFRACLYLSTGAMYSSKCLMKPL*AATTNS Trigger: TGAGTTTGTTGTTGCTGCCAACAGTGGCTTCATGAG...GCATTTTGAGGAATACATAGCACCAGTTGATAAGTATAGGCAAGCTCTGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS TCA 90 bp | CATGCAATTGTGGAAAGAAATTACTTTGTGCTCTTTCAGAAGATCTaGGATCATCTTGGGAACTGTAGTGGAGGAAACCCACACATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: HAIVERNYFVLFQKI*DHLGNCSGGNPHIV Trigger: AACGATGTGTGGGTTTCCTCCACTACAGTTCCCAAGATGATCTCAGATCTTCTGAAAGAGCACAAAGTAATTTCTTTCCACAATTGCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090329.2 ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTATCAACTGGTGCTATGTATTCCTCAAAATGCCAAGATTACAAACTCTGCTCATGAAGCCACTGTaGGCAGCAACAACAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILINWCYVFLKMPRLQTLLMKPL*AATTNS Trigger: TGAGTTTGTTGTTGCTGCCAACAGTGGCTTCATGAG...CAGAGTTTGTAATCTTGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS-3UTR CAA 90 bp | TTTCAGAGCTTGCCTATACTTATCAACTGGTGCTATGTATTCCTCAAAATGCCACTACAAACAGCCCTTTaGCTTAATCTTCCAATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FQSLPILINWCYVFLKMPLQTAL*LNLPIA Trigger: AGCAATTGGAAGATTAAGCAAAAGGGCTGTTTGTAG...TGGCATTTTGAGGAATACATAGCACCAGTTGATAAGTATAGGCAAGCTCTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS CAA 90 bp | CCCATGCTCATGAAGCCACTGTTGGCAGCAACAACAAACTCAAACTaGTCTCCATCAGTGCACGCCAGTTGTATGATCCGAGGGAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PMLMKPLLAATTNSN*SPSVHASCMIRGKS Trigger: CGACTTCCCTCGGATCATACAACTGGCGTGCACTGATGGAGACAAGTTTGAGTTTGTTGTTGCTGCCAACAGTGGCTTCATGAGCATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090329.2 ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS CAA 90 bp | GAGAGAAGAAGCAAGAAGAAGGTCCCCATGCTCATGAAGCCACTGTaGGCAGCAACAACAAACTCAAACTTGTCTCCATCAGTGCACGCC | + |
|
Preference number: 6 (lower is better) Translates to: ERRSKKKVPMLMKPL*AATTNSNLSPSVHA Trigger: GGCGTGCACTGATGGAGACAAGTTTGAGTTTGTTGTTGCTGCCAACAGTGGCTTCATGAGCATGGGGACCTTCTTCTTGCTTCTTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090329.2 ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS CAA 72 bp | ATGAAGCCACTGTTGGCAGCAACAACAAACTCAAACTaGTCTCCATCAGTGCACGCCAGTTGTATGATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: MKPLLAATTNSN*SPSVHASCMIR Trigger: TCGGATCATACAACTGGCGTGCACTGATGGAGACAAGTTTGAGTTTGTTGTTGCTGCCAACAGTGGCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090329.2 ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS CAA 72 bp | AGCAAGAAGAAGGTCCCCATGCTCATGAAGCCACTGTaGGCAGCAACAACAAACTCAAACTTGTCTCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SKKKVPMLMKPL*AATTNSNLSPS Trigger: TGATGGAGACAAGTTTGAGTTTGTTGTTGCTGCCAACAGTGGCTTCATGAGCATGGGGACCTTCTTCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090329.2 ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS TCA 72 bp | ATGGACCACTCCAGTGACCCAGCCAGCAATTACAAATaGAATGCATATTCTAGGGCTCATGATGCTCAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: MDHSSDPASNYK*NAYSRAHDAQV Trigger: TACTTGAGCATCATGAGCCCTAGAATATGCATTTCATTTGTAATTGCTGGCTGGGTCACTGGAGTGGTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090329.2 ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS CAA 72 bp | ATTACTTTGTGCTCTTTCAGAAGATCTGAGATCATCTaGGGAACTGTAGTGGAGGAAACCCACACATCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ITLCSFRRSEII*GTVVEETHTSF Trigger: GAACGATGTGTGGGTTTCCTCCACTACAGTTCCCAAGATGATCTCAGATCTTCTGAAAGAGCACAAAGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090329.2 ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS CAA 90 bp | TGGAAAGAAATTACTTTGTGCTCTTTCAGAAGATCTGAGATCATCTaGGGAACTGTAGTGGAGGAAACCCACACATCGTTCAAAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: WKEITLCSFRRSEII*GTVVEETHTSFKDR Trigger: CCTGTCTTTGAACGATGTGTGGGTTTCCTCCACTACAGTTCCCAAGATGATCTCAGATCTTCTGAAAGAGCACAAAGTAATTTCTTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090329.2 ENSMUST00000213823.2 ENSMUST00000216697.2 |
||
| CDS TCA 72 bp | GTGGAAAGAAATTACTTTGTGCTCTTTCAGAAGATCTaGGATCATCTTGGGAACTGTAGTGGAGGAAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: VERNYFVLFQKI*DHLGNCSGGNP Trigger: TGGGTTTCCTCCACTACAGTTCCCAAGATGATCTCAGATCTTCTGAAAGAGCACAAAGTAATTTCTTTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090329.2 ENSMUST00000213823.2 ENSMUST00000216697.2 |
||