RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1278 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000068647

Ensembl transcript IDs: ENSMUST00000090330.2, ENSMUST00000213516.2, ENSMUST00000213727.2, ENSMUST00000214669.2, ENSMUST00000215210.2, ENSMUST00000216229.2

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTGTCACCGGCGGTAGTGTCTGGGTCTGGTGTCTGTACATAGGATaGATCCCCAGGTGGAGCAGTCTCCAGATAGCCTTACTTCAGTCT +
Preference number: 1 (lower is better)
Translates to: LVTGGSVWVWCLYIG*IPRWSSLQIALLQS
Trigger: AGACTGAAGTAAGGCTATCTGGAGACTGCTCCACCTGGGGATCCATCCTATGTACAGACACCAGACCCAGACACTACCGCCGGTGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 90 bp GACCAAGGGCCTCTTCTCCCATTGATGCCCGACAAGGCCATCCTCTaGTACATATGTGGCTGCAGTGATGGGTCCCTCTATGTGTACTCT +
Preference number: 1 (lower is better)
Translates to: DQGPLLPLMPDKAIL*YICGCSDGSLYVYS
Trigger: AGAGTACACATAGAGGGACCCATCACTGCAGCCACATATGTACCAGAGGATGGCCTTGTCGGGCATCAATGGGAGAAGAGGCCCTTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 90 bp CCCACTCTCATCTCTCTGCTCTCATATTTCCCTACACTGGAGCATTaGGCCTTCACAGGACCAAGGGCCTCTTCTCCCATTGATGCCCGA +
Preference number: 1 (lower is better)
Translates to: PTLISLLSYFPTLEH*AFTGPRASSPIDAR
Trigger: TCGGGCATCAATGGGAGAAGAGGCCCTTGGTCCTGTGAAGGCTCAATGCTCCAGTGTAGGGAAATATGAGAGCAGAGAGATGAGAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR GCA 90 bp TTCTATGAGGGTGTACCCCCACCCACCCACCCACTCTCATCTCTCTaGTCTCATATTTCCCTACACTGGAGCATTGAGCCTTCACAGGAC +
Preference number: 1 (lower is better)
Translates to: FYEGVPPPTHPLSSL*SHISLHWSIEPSQD
Trigger: GTCCTGTGAAGGCTCAATGCTCCAGTGTAGGGAAATATGAGAGCAGAGAGATGAGAGTGGGTGGGTGGGTGGGGGTACACCCTCATAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 90 bp GGTAGTGTCTGGGTCTGGTGTCTGTACATAGGATGGATCCCCAGGTaGAGCAGTCTCCAGATAGCCTTACTTCAGTCTCTGCTCCACACT +
Preference number: 1 (lower is better)
Translates to: GSVWVWCLYIGWIPR*SSLQIALLQSLLHT
Trigger: AGTGTGGAGCAGAGACTGAAGTAAGGCTATCTGGAGACTGCTCCACCTGGGGATCCATCCTATGTACAGACACCAGACCCAGACACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 90 bp GATGAGGGAAGGCAAAAGGTGGGTGAGGAGTTGAGGGTAGGAACATaGGGGGTAAGGGAGGATAAAGGGTGGGAGTACTTGGAGAGACAA +
Preference number: 1 (lower is better)
Translates to: DEGRQKVGEELRVGT*GVREDKGWEYLERQ
Trigger: TTGTCTCTCCAAGTACTCCCACCCTTTATCCTCCCTTACCCCTCATGTTCCTACCCTCAACTCCTCACCCACCTTTTGCCTTCCCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 90 bp TGCTGTCAGCAAGCACTTCGTGGCATCTTCAACAGTGTCAGGGTTTaGTGTTTGCAGATGAGATGGATCCCTAGTTGGGGAGGTCTCTGG +
Preference number: 1 (lower is better)
Translates to: CCQQALRGIFNSVRV*CLQMRWIPSWGGLW
Trigger: CCAGAGACCTCCCCAACTAGGGATCCATCTCATCTGCAAACACCAAACCCTGACACTGTTGAAGATGCCACGAAGTGCTTGCTGACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 90 bp ATCCTTTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATaGTTGGCTGTGAGTATCCACCTTTGTATTTGTCAGGTCTGGCAG +
Preference number: 1 (lower is better)
Translates to: ILSLTPPLGSLCSLQ*LAVSIHLCICQVWQ
Trigger: CTGCCAGACCTGACAAATACAAAGGTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 90 bp TGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTAGTTaGTATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTC +
Preference number: 1 (lower is better)
Translates to: WLVAYPQEALGDLVS*YCSSYGAAIPFSSF
Trigger: GAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAACTAACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 90 bp AGTGCTCAATCCTTCTATTCCTCTTCAGTACTCAGGGAACCAAAGTaGGTGGCACAAAGAATTAGGTCAGAGGATTGGGAGAGGTGCAGC +
Preference number: 1 (lower is better)
Translates to: SAQSFYSSSVLREPK*VAQRIRSEDWERCS
Trigger: GCTGCACCTCTCCCAATCCTCTGACCTAATTCTTTGTGCCACTCACTTTGGTTCCCTGAGTACTGAAGAGGAATAGAAGGATTGAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 90 bp AACAGTGTCAGGGTTTGGTGTTTGCAGATGAGATGGATCCCTAGTTaGGGAGGTCTCTGGATAGCCTTTCCTTCTGTCTCTGTTCCATTT +
Preference number: 1 (lower is better)
Translates to: NSVRVWCLQMRWIPS*GGLWIAFPSVSVPF
Trigger: AAATGGAACAGAGACAGAAGGAAAGGCTATCCAGAGACCTCCCCAACTAGGGATCCATCTCATCTGCAAACACCAAACCCTGACACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 90 bp GTTACACATATATCTGGAGTCATGGATCCTTCCATGAATACTCTTTaGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTAGT +
Preference number: 1 (lower is better)
Translates to: VTHISGVMDPSMNTL*LVAYPQEALGDLVS
Trigger: ACTAACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGAAGGATCCATGACTCCAGATATATGTGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 90 bp TTAATTTACATTTCAAATGTTATCTCCTTTCCTGGTACAACCCTGTaGAACTCCCTATCCCACCCCCTCCCCTACTTCTATGAGGGTGTA +
Preference number: 1 (lower is better)
Translates to: LIYISNVISFPGTTL*NSLSHPLPYFYEGV
Trigger: TACACCCTCATAGAAGTAGGGGAGGGGGTGGGATAGGGAGTTTCACAGGGTTGTACCAGGAAAGGAGATAACATTTGAAATGTAAATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 90 bp CTCCTATTCATGCCAACTAAGGCCATGCTCTGTTACACATATATCTaGAGTCATGGATCCTTCCATGAATACTCTTTGGTTGGTGGCTTA +
Preference number: 1 (lower is better)
Translates to: LLFMPTKAMLCYTYI*SHGSFHEYSLVGGL
Trigger: TAAGCCACCAACCAAAGAGTATTCATGGAAGGATCCATGACTCCAGATATATGTGTAACAGAGCATGGCCTTAGTTGGCATGAATAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 90 bp TCTGTCTTCATCAGAGAAGCTTCTTATTGTAGTTTGTGGTGGGGCTaGCTGTTGGGGAATGTTAACACAGAAACCCATAACTGGGAATTA +
Preference number: 1 (lower is better)
Translates to: SVFIREASYCSLWWG*LLGNVNTETHNWEL
Trigger: TAATTCCCAGTTATGGGTTTCTGTGTTAACATTCCCCAACAGTCAGCCCCACCACAAACTACAATAAGAAGCTTCTCTGATGAAGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR GCA 90 bp TCTCAGGAAAACTGGAATATATCTACCTCAAGACCCAGATACATATaGCACTCTCAGGCATATACCCAAAAGATGTTCCACTATGCCACA +
Preference number: 1 (lower is better)
Translates to: SQENWNISTSRPRYI*HSQAYTQKMFHYAT
Trigger: TGTGGCATAGTGGAACATCTTTTGGGTATATGCCTGAGAGTGGCATATGTATCTGGGTCTTGAGGTAGATATATTCCAGTTTTCCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR GCA 90 bp AATGTTAACACAGAAACCCATAACTGGGAATTAGTCATAGGTGAGTaGTCAATCCTTCTATTCCTCTTCAGTACTCAGGGAACCAAAGTG +
Preference number: 1 (lower is better)
Translates to: NVNTETHNWELVIGE*SILLFLFSTQGTKV
Trigger: CACTTTGGTTCCCTGAGTACTGAAGAGGAATAGAAGGATTGAGCACTCACCTATGACTAATTCCCAGTTATGGGTTTCTGTGTTAACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 90 bp AGACTCCTAGCAATGTTGGATATGAAGCCTAAAGTGGCTATCTCCTaGAATCAGGCAATACTTCCAATAAAGGGATTTGAAAAACAACCC +
Preference number: 1 (lower is better)
Translates to: RLLAMLDMKPKVAIS*NQAILPIKGFEKQP
Trigger: GGGTTGTTTTTCAAATCCCTTTATTGGAAGTATTGCCTGATTTCAGGAGATAGCCACTTTAGGCTTCATATCCAACATTGCTAGGAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 90 bp TGTCTAGTCTCAATTGAAAAAGACATGCTTAGACTTAGTACAACTTaGTATGCCAAGGCTGGTTGTTATGTATGCGAGGACTTCCTATTT +
Preference number: 1 (lower is better)
Translates to: CLVSIEKDMLRLSTT*YAKAGCYVCEDFLF
Trigger: AAATAGGAAGTCCTCGCATACATAACAACCAGCCTTGGCATATCAAGTTGTACTAAGTCTAAGCATGTCTTTTTCAATTGAGACTAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 90 bp CATCTTTTCCCAATATTATTTACCGTAGAGGCAATATTACACAACTaGTTTTGTCTTCACTGGATACTGATCCTATGTAGGTATGAACAC +
Preference number: 1 (lower is better)
Translates to: HLFPILFTVEAILHN*FCLHWILILCRYEH
Trigger: GTGTTCATACCTACATAGGATCAGTATCCAGTGAAGACAAAACCAGTTGTGTAATATTGCCTCTACGGTAAATAATATTGGGAAAAGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 90 bp CACTGGAGCATTGAGCCTTCACAGGACCAAGGGCCTCTTCTCCCATaGATGCCCGACAAGGCCATCCTCTGGTACATATGTGGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: HWSIEPSQDQGPLLP*MPDKAILWYICGCS
Trigger: ACTGCAGCCACATATGTACCAGAGGATGGCCTTGTCGGGCATCAATGGGAGAAGAGGCCCTTGGTCCTGTGAAGGCTCAATGCTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCGACTTAGGAGGTGGATaGGGGAAGGCAAAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: PFASMRILLYSLTHSHLIDLGGG*GKAKGG
Trigger: CCCACCTTTTGCCTTCCCTCATCCACCTCCTAAGTC...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCAGGGACAGTCTCTGTaGCCACATTGTCTGCCTTTG +
Preference number: 2 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLQGQSL*PHCLPL
Trigger: CAAAGGCAGACAATGTGGTCACAGAGACTGTCCCTG...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp CTGCATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCCATACCAAGTGCTCTTTATCACTaGATCAGGTCTCTATCCCCC +
Preference number: 2 (lower is better)
Translates to: LHLYWSGAGRAPQRTAIPSALYH*IRSLSP
Trigger: GGGGGATAGAGACCTGATTCAGTGATAAAGAGCACT...TGGTATGGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCGAGAGTGAGCGTACATaGGACAGACTTAGGAGCACT +
Preference number: 2 (lower is better)
Translates to: PFASMRILLYSLTHSHLIESERT*DRLRST
Trigger: AGTGCTCCTAAGTCTGTCTCATGTACGCTCACTCTC...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp CTGCATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCCATACCAGAGGATTGGGAGAGGTaGAGCAAACAGACATCTTGT +
Preference number: 2 (lower is better)
Translates to: LHLYWSGAGRAPQRTAIPEDWER*SKQTSC
Trigger: ACAAGATGTCTGTTTGCTGCACCTCTCCCAATCCTC...TGGTATGGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGGGAACACTCCTCCATTaGTGGTGGGAGTGCAAACTT +
Preference number: 2 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLGTLLH*WWECKL
Trigger: AAGTTTGCACTCCCACCAGCAATGGAGGAGTGTTCC...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp CTGCATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCCATACCAGGTGGGGCTGACTGTTaGGGAATGTTAACACAGAAA +
Preference number: 2 (lower is better)
Translates to: LHLYWSGAGRAPQRTAIPGGADC*GMLTQK
Trigger: TTTCTGTGTTAACATTCCCCAACAGTCAGCCCCACC...TGGTATGGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCTGTCTGTACATAGGATaGATCCCCAGGTGGAGCAGT +
Preference number: 2 (lower is better)
Translates to: PFASMRILLYSLTHSHLICLYIG*IPRWSS
Trigger: ACTGCTCCACCTGGGGATCCATCCTATGTACAGACA...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp CTGCATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCCATACCAAGGGAGGATAAAGGGTaGGAGTACTTGGAGAGACAA +
Preference number: 2 (lower is better)
Translates to: LHLYWSGAGRAPQRTAIPREDKG*EYLERQ
Trigger: TTGTCTCTCCAAGTACTCCCACCCTTTATCCTCCCT...TGGTATGGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGAGTTGGGGAGGTCTCTaGATAGCCTTTCCTTCTGTC +
Preference number: 2 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLSWGGL*IAFPSV
Trigger: GACAGAAGGAAAGGCTATCCAGAGACCTCCCCAACT...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 90 bp GGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGTATCCACCTTaGTATTTGTCAGGTCTGGCAGAGACCCTCAAGAGATTCCTGTTA +
Preference number: 2 (lower is better)
Translates to: GVPVLTPMVGCEYPP*YLSGLAETLKRFLL
Trigger: TAACAGGAATCTCTTGAGGGTCTCTGCCAGACCTGACAAATACAAAGGTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 90 bp CTTTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTaGGCTGTGAGTATCCACCTTTGTATTTGTCAGGTCTGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: LSLTPPLGSLCSLQW*AVSIHLCICQVWQR
Trigger: TCTCTGCCAGACCTGACAAATACAAAGGTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp CCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGTATCCACCTTAGAACTGCAAAGAATTaGGGCCAGCAATACCAAGGA +
Preference number: 2 (lower is better)
Translates to: PPLGSLCSLQWLAVSIHLRTAKN*GQQYQG
Trigger: TCCTTGGTATTGCTGGCCTCAATTCTTTGCAGTTCT...AAGGTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGACTTGGAGAGACAACTaGTTTTCCTGTGTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLTWRDN*FSCVWS
Trigger: GCTCCACACACAGGAAAATCAGTTGTCTCTCCAAGT...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCAGCAATACCAAGGATaGAGGTACAGGGTTTCACAG +
Preference number: 2 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLQQYQG*RYRVSQ
Trigger: CTGTGAAACCCTGTACCTCCATCCTTGGTATTGCTG...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp TCCATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGAAGGCAAAAGGTGGGTaGGGAGTTGAGGGTAGGAAC +
Preference number: 2 (lower is better)
Translates to: SMNTLWLVAYPQEALGDLKAKGG*GVEGRN
Trigger: GTTCCTACCCTCAACTCCTCACCCACCTTTTGCCTT...CAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp TTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGTTTTCCAGCAAGACATaGAGTTATCTGGATCAGAGG +
Preference number: 2 (lower is better)
Translates to: FPNSSIGVPVLTPMVGCEFSSKT*SYLDQR
Trigger: CCTCTGATCCAGATAACTGCATGTCTTGCTGGAAAA...CTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213727.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp ATAGGATGGATCCCCAGGTGGAGCAGTCTCCAGATAGCCTTACTTCAGTCTCTGTCGTCATACCAGACATaGCACTACTGTACTTCTGGG +
Preference number: 2 (lower is better)
Translates to: IGWIPRWSSLQIALLQSLSSYQT*HYCTSG
Trigger: CCCAGAAGTACAGTAGTGGCATGTCTGGTATGACGA...CAGAGACTGAAGTAAGGCTATCTGGAGACTGCTCCACCTGGGGATCCATCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGAGACCCAGATACATATaGCACTCTCAGGCATATACC +
Preference number: 2 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLRPRYI*HSQAYT
Trigger: GGTATATGCCTGAGAGTGGCATATGTATCTGGGTCT...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp ATAGGATGGATCCCCAGGTGGAGCAGTCTCCAGATAGCCTTACTTCAGTCTCTGCCACTACTGTACTTCTaGGCATGTCTTGCCTGTCAA +
Preference number: 2 (lower is better)
Translates to: IGWIPRWSSLQIALLQSLPLLYF*ACLACQ
Trigger: TTGACAGGCAAGACATGCCCAGAAGTACAGTAGTGG...CAGAGACTGAAGTAAGGCTATCTGGAGACTGCTCCACCTGGGGATCCATCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp CTGCATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCCATACCAGAAACACCCACATTTTaGTCTTCCTTCTTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: LHLYWSGAGRAPQRTAIPETPTF*SSFFLS
Trigger: GCTCAAGAAGAAGGAAGACCAAAATGTGGGTGTTTC...TGGTATGGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 90 bp TTACAAACCCCTTCAGTTACTTCAATCCTTTCCCTAACTCCTCCATaGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGTATCCAC +
Preference number: 2 (lower is better)
Translates to: LQTPSVTSILSLTPP*GSLCSLQWLAVSIH
Trigger: GTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAGGATTGAAGTAACTGAAGGGGTTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp ATAGGATGGATCCCCAGGTGGAGCAGTCTCCAGATAGCCTTACTTCAGTCTCTGAGAACTGCAAAGAATTaGGGCCAGCAATACCAAGGA +
Preference number: 2 (lower is better)
Translates to: IGWIPRWSSLQIALLQSLRTAKN*GQQYQG
Trigger: TCCTTGGTATTGCTGGCCTCAATTCTTTGCAGTTCT...CAGAGACTGAAGTAAGGCTATCTGGAGACTGCTCCACCTGGGGATCCATCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGACCAATAGAATACTATaGGCAAGAGGTACAGGCAGT +
Preference number: 2 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLTNRIL*ARGTGS
Trigger: ACTGCCTGTACCTCTTGCTCATAGTATTCTATTGGT...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp CTGCATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCCATACCAACTTTAAGCTCTGTTTaGGAAGAAGTGATACCACCT +
Preference number: 2 (lower is better)
Translates to: LHLYWSGAGRAPQRTAIPTLSSV*EEVIPP
Trigger: AGGTGGTATCACTTCTTCTCAAACAGAGCTTAAAGT...TGGTATGGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTAAGGCAAAAGGTGGGTaGGGAGTTGAGGGTAGGAAC +
Preference number: 2 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFKAKGG*GVEGRN
Trigger: GTTCCTACCCTCAACTCCTCACCCACCTTTTGCCTT...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp TTCAATCCTTTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTCCTTACTTCAGTCTCTaGTCCACACTTTGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: FNPFPNSSIGVPVLTPMVPYFSL*STLCPH
Trigger: ATGGGGACAAAGTGTGGAGCAGAGACTGAAGTAAGG...AACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAGGATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp CCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGTATCCACCTTCTGCTTTCATCCTTGTaGTTGATTTTAGGCACTTAC +
Preference number: 2 (lower is better)
Translates to: PPLGSLCSLQWLAVSIHLLLSSL*LILGTY
Trigger: GTAAGTGCCTAAAATCAACCACAAGGATGAAAGCAG...AAGGTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGGAGCTTACTTCACTGTaGTTATCTGCACAAGAACTG +
Preference number: 2 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLELTSL*LSAQEL
Trigger: CAGTTCTTGTGCAGATAACCACAGTGAAGTAAGCTC...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp TCCATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGTCCCTGTCTTTCCTTTaGACAGGAACACCACTGGGT +
Preference number: 2 (lower is better)
Translates to: SMNTLWLVAYPQEALGDLSLSFL*TGTPLG
Trigger: ACCCAGTGGTGTTCCTGTCCAAAGGAAAGACAGGGA...CAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp TTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGACCAATAATGATAAATaGCTGCTTTCATCCTTGTGG +
Preference number: 2 (lower is better)
Translates to: FPNSSIGVPVLTPMVGCETNNDK*LLSSLW
Trigger: CCACAAGGATGAAAGCAGTCATTTATCATTATTGGT...CTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp CTGCATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCCATACCATTCACTGTGGTTATCTaGACAAGAACTGCAAAGAAT +
Preference number: 2 (lower is better)
Translates to: LHLYWSGAGRAPQRTAIPFTVVI*TRTAKN
Trigger: ATTCTTTGCAGTTCTTGTGCAGATAACCACAGTGAA...TGGTATGGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp TTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGGTGATTCTATATTTGTaGACATTCATGCCAACACTC +
Preference number: 2 (lower is better)
Translates to: FPNSSIGVPVLTPMVGCEVILYL*TFMPTL
Trigger: GAGTGTTGGCATGAATGTGCACAAATATAGAATCAC...CTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTGGAACACTCCTCCATTaGTGGTGGGAGTGCAAACTT +
Preference number: 2 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFGTLLH*WWECKL
Trigger: AAGTTTGCACTCCCACCAGCAATGGAGGAGTGTTCC...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp GTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGAGTTGGGGAGGTCTCTaGATAGCCTTTCCTTCTGTC +
Preference number: 2 (lower is better)
Translates to: VQWLTISICICIGQVLVESWGGL*IAFPSV
Trigger: GACAGAAGGAAAGGCTATCCAGAGACCTCCCCAACT...CTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp TTCAATCCTTTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTCTTTCTAAGAAGGACTaGAACACCCACATTTTGGTC +
Preference number: 2 (lower is better)
Translates to: FNPFPNSSIGVPVLTPMVLSKKD*NTHILV
Trigger: GACCAAAATGTGGGTGTTTCAGTCCTTCTTAGAAAG...AACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAGGATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp TTCAATCCTTTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTTATCTGCACAAGAACTaGAAAGAATTGAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: FNPFPNSSIGVPVLTPMVYLHKN*KELRPA
Trigger: TGCTGGCCTCAATTCTTTGCAGTTCTTGTGCAGATA...AACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAGGATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp GTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGTCGTCATACCAGACATaGCACTACTGTACTTCTGGG +
Preference number: 2 (lower is better)
Translates to: VQWLTISICICIGQVLVESSYQT*HYCTSG
Trigger: CCCAGAAGTACAGTAGTGGCATGTCTGGTATGACGA...CTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp GTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGTGGTACATATGTGGCTaGAGTGATGGGTCCCTCTAT +
Preference number: 2 (lower is better)
Translates to: VQWLTISICICIGQVLVEWYICG*SDGSLY
Trigger: ATAGAGGGACCCATCACTGCAGCCACATATGTACCA...CTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTCAGCAATACCAAGGATaGAGGTACAGGGTTTCACAG +
Preference number: 2 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFQQYQG*RYRVSQ
Trigger: CTGTGAAACCCTGTACCTCCATCCTTGGTATTGCTG...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp TCCATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGGGAACCAAAGTGAGTaGCACAAAGAATTAGGTCAG +
Preference number: 2 (lower is better)
Translates to: SMNTLWLVAYPQEALGDLGNQSE*HKELGQ
Trigger: CTGACCTAATTCTTTGTGCCACTCACTTTGGTTCCC...CAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp ACAGAATGGCCCACAGAGTGTTATAGAGAACATAGCCTGAGAGCTGACATTACCCCACTACTGTACTTCTaGGCATGTCTTGCCTGTCAA +
Preference number: 2 (lower is better)
Translates to: TEWPTECYREHSLRADITPLLYF*ACLACQ
Trigger: TTGACAGGCAAGACATGCCCAGAAGTACAGTAGTGG...GGTAATGTCAGCTCTCAGGCTATGTTCTCTATAACACTCTGTGGGCCATTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp TCCATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGATATTGTTCTTCCTATaGGGCTGCAATCCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: SMNTLWLVAYPQEALGDLILFFL*GCNPLQ
Trigger: CTGAAGGGGATTGCAGCCCCATAGGAAGAACAATAT...CAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp TCCATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGCTTTCTAAGAAGGACTaGAACACCCACATTTTGGTC +
Preference number: 2 (lower is better)
Translates to: SMNTLWLVAYPQEALGDLLSKKD*NTHILV
Trigger: GACCAAAATGTGGGTGTTTCAGTCCTTCTTAGAAAG...CAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp AGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAACTTGGAGAGACAACTaGTTTTCCTGTGTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: SPMVDYQYLHLYWSGAGRTWRDN*FSCVWS
Trigger: GCTCCACACACAGGAAAATCAGTTGTCTCTCCAAGT...TCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp CCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTTATAGGATAATAAACTaGCTCAGCATAGCAGTATTC +
Preference number: 2 (lower is better)
Translates to: PLGSLGSVQWLTISICICYRIIN*LSIAVF
Trigger: GAATACTGCTATGCTGAGGCAGTTTATTATCCTATA...ACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCTATAGGATAATAAACTaGCTCAGCATAGCAGTATTC +
Preference number: 2 (lower is better)
Translates to: PFASMRILLYSLTHSHLIYRIIN*LSIAVF
Trigger: GAATACTGCTATGCTGAGGCAGTTTATTATCCTATA...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp TCCATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGTATCTGCACAAGAACTaGAAAGAATTGAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: SMNTLWLVAYPQEALGDLYLHKN*KELRPA
Trigger: TGCTGGCCTCAATTCTTTGCAGTTCTTGTGCAGATA...CAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTCCACTCTCATCTCTCTaGTCTCATATTTCCCTACAC +
Preference number: 2 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFPLSSL*SHISLH
Trigger: GTGTAGGGAAATATGAGAGCAGAGAGATGAGAGTGG...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp ACAGAATGGCCCACAGAGTGTTATAGAGAACATAGCCTGAGAGCTGACATTACCGGGAACCAAAGTGAGTaGCACAAAGAATTAGGTCAG +
Preference number: 2 (lower is better)
Translates to: TEWPTECYREHSLRADITGNQSE*HKELGQ
Trigger: CTGACCTAATTCTTTGTGCCACTCACTTTGGTTCCC...GGTAATGTCAGCTCTCAGGCTATGTTCTCTATAACACTCTGTGGGCCATTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp ATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTACCAATAGAATACTATaGGCAAGAGGTACAGGCAGT +
Preference number: 2 (lower is better)
Translates to: MNTLWLVAYPQEALGDLVTNRIL*ARGTGS
Trigger: ACTGCCTGTACCTCTTGCTCATAGTATTCTATTGGT...AACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp ATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTCTTTCTAAGAAGGACTaGAACACCCACATTTTGGTC +
Preference number: 2 (lower is better)
Translates to: MNTLWLVAYPQEALGDLVLSKKD*NTHILV
Trigger: GACCAAAATGTGGGTGTTTCAGTCCTTCTTAGAAAG...AACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp ACAGAATGGCCCACAGAGTGTTATAGAGAACATAGCCTGAGAGCTGACATTACCTATCTGCACAAGAACTaGAAAGAATTGAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: TEWPTECYREHSLRADITYLHKN*KELRPA
Trigger: TGCTGGCCTCAATTCTTTGCAGTTCTTGTGCAGATA...GGTAATGTCAGCTCTCAGGCTATGTTCTCTATAACACTCTGTGGGCCATTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp ACAGAATGGCCCACAGAGTGTTATAGAGAACATAGCCTGAGAGCTGACATTACCGAGCTTACTTCACTGTaGTTATCTGCACAAGAACTG +
Preference number: 2 (lower is better)
Translates to: TEWPTECYREHSLRADITELTSL*LSAQEL
Trigger: CAGTTCTTGTGCAGATAACCACAGTGAAGTAAGCTC...GGTAATGTCAGCTCTCAGGCTATGTTCTCTATAACACTCTGTGGGCCATTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp GTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGGAGCTTACTTCACTGTaGTTATCTGCACAAGAACTG +
Preference number: 2 (lower is better)
Translates to: VQWLTISICICIGQVLVEELTSL*LSAQEL
Trigger: CAGTTCTTGTGCAGATAACCACAGTGAAGTAAGCTC...CTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTGAAACACCCACATTTTaGTCTTCCTTCTTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFETPTF*SSFFLS
Trigger: GCTCAAGAAGAAGGAAGACCAAAATGTGGGTGTTTC...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp TCCATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGGACAGGAACACCACTaGGTTAAAATTTTTGAGATG +
Preference number: 2 (lower is better)
Translates to: SMNTLWLVAYPQEALGDLGQEHH*VKIFEM
Trigger: CATCTCAAAAATTTTAACCCAGTGGTGTTCCTGTCC...CAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp TTTCTAAGAAGGACTGAAACACCCACATTTTGGTCTTCCTTCTTCTTGAGCTTCAGTGCTCTTTATCACTaGATCAGGTCTCTATCCCCC +
Preference number: 2 (lower is better)
Translates to: FLRRTETPTFWSSFFLSFSALYH*IRSLSP
Trigger: GGGGGATAGAGACCTGATTCAGTGATAAAGAGCACT...GAAGCTCAAGAAGAAGGAAGACCAAAATGTGGGTGTTTCAGTCCTTCTTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp AGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAACCAATAGAATACTATaGGCAAGAGGTACAGGCAGT +
Preference number: 2 (lower is better)
Translates to: SPMVDYQYLHLYWSGAGRTNRIL*ARGTGS
Trigger: ACTGCCTGTACCTCTTGCTCATAGTATTCTATTGGT...TCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp GTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGACTTTAAGCTCTGTTTaGGAAGAAGTGATACCACCT +
Preference number: 2 (lower is better)
Translates to: VQWLTISICICIGQVLVETLSSV*EEVIPP
Trigger: AGGTGGTATCACTTCTTCTCAAACAGAGCTTAAAGT...CTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp TTCAATCCTTTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTTATAGGATAATAAACTaGCTCAGCATAGCAGTATTC +
Preference number: 2 (lower is better)
Translates to: FNPFPNSSIGVPVLTPMVYRIIN*LSIAVF
Trigger: GAATACTGCTATGCTGAGGCAGTTTATTATCCTATA...AACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAGGATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp ATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTCTTTGTCCCCATATTTaGTCTCCTGTGCATTTTGTT +
Preference number: 2 (lower is better)
Translates to: MNTLWLVAYPQEALGDLVLCPHI*SPVHFV
Trigger: AACAAAATGCACAGGAGAGCAAATATGGGGACAAAG...AACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp ACAGAATGGCCCACAGAGTGTTATAGAGAACATAGCCTGAGAGCTGACATTACCCTGCTTTCATCCTTGTaGTTGATTTTAGGCACTTAC +
Preference number: 2 (lower is better)
Translates to: TEWPTECYREHSLRADITLLSSL*LILGTY
Trigger: GTAAGTGCCTAAAATCAACCACAAGGATGAAAGCAG...GGTAATGTCAGCTCTCAGGCTATGTTCTCTATAACACTCTGTGGGCCATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp ATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTGTGTGGAGCTTTTTCTaGGACAAACTAGAAACCTTA +
Preference number: 2 (lower is better)
Translates to: MNTLWLVAYPQEALGDLVVWSFF*DKLETL
Trigger: TAAGGTTTCTAGTTTGTCCCAGAAAAAGCTCCACAC...AACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp AGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAACTTTAAGCTCTGTTTaGGAAGAAGTGATACCACCT +
Preference number: 2 (lower is better)
Translates to: SPMVDYQYLHLYWSGAGRTLSSV*EEVIPP
Trigger: AGGTGGTATCACTTCTTCTCAAACAGAGCTTAAAGT...TCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp GTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGCAAAATATTTGTTTTTaGATTTGCAGGCTGGGATGG +
Preference number: 2 (lower is better)
Translates to: VQWLTISICICIGQVLVEQNICF*ICRLGW
Trigger: CCATCCCAGCCTGCAAATTCAAAAACAAATATTTTG...CTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTTTCACTGTGGTTATCTaGACAAGAACTGCAAAGAAT +
Preference number: 2 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFFTVVI*TRTAKN
Trigger: ATTCTTTGCAGTTCTTGTGCAGATAACCACAGTGAA...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp AGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGACTGCTTTCATCCTTGTaGTTGATTTTAGGCACTTAC +
Preference number: 2 (lower is better)
Translates to: SPMVDYQYLHLYWSGAGRLLSSL*LILGTY
Trigger: GTAAGTGCCTAAAATCAACCACAAGGATGAAAGCAG...TCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp GAAGACATGGAAGAATTGAAGGAGCCAGTAGGGTCAAGGTCACATATACACAAAGGTAAGATCTCCGGTTaGTTGATGTTGTTGTTCTTC +
Preference number: 2 (lower is better)
Translates to: EDMEELKEPVGSRSHIHKGKISG*LMLLFF
Trigger: GAAGAACAACAACATCAACCAACCGGAGATCTTACC...TTTGTGTATATGTGACCTTGACCCTACTGGCTCCTTCAATTCTTCCATGTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 90 bp CTCAGGCATATACCCAAAAGATGTTCCACTATGCCACAAGGAAACTaGTTCAACTATATTCCTAGCAGCTTTACTCATAACAGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: LRHIPKRCSTMPQGN*FNYIPSSFTHNSQK
Trigger: TTTCTGGCTGTTATGAGTAAAGCTGCTAGGAATATAGTTGAACAAGTTTCCTTGTGGCATAGTGGAACATCTTTTGGGTATATGCCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp GAAGACATGGAAGAATTGAAGGAGCCAGTAGGGTCAAGGTCACATATACACAAAACCAATAATGATAAATaGCTGCTTTCATCCTTGTGG +
Preference number: 2 (lower is better)
Translates to: EDMEELKEPVGSRSHIHKTNNDK*LLSSLW
Trigger: CCACAAGGATGAAAGCAGTCATTTATCATTATTGGT...TTTGTGTATATGTGACCTTGACCCTACTGGCTCCTTCAATTCTTCCATGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp TTTCTAAGAAGGACTGAAACACCCACATTTTGGTCTTCCTTCTTCTTGAGCTTCACTTTAAGCTCTGTTTaGGAAGAAGTGATACCACCT +
Preference number: 2 (lower is better)
Translates to: FLRRTETPTFWSSFFLSFTLSSV*EEVIPP
Trigger: AGGTGGTATCACTTCTTCTCAAACAGAGCTTAAAGT...GAAGCTCAAGAAGAAGGAAGACCAAAATGTGGGTGTTTCAGTCCTTCTTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp TTCCCAATATTATTTACCGTAGAGGCAATATTACACAACTGGTTTTGTCTTCACGAGGATTGGGAGAGGTaGAGCAAACAGACATCTTGT +
Preference number: 2 (lower is better)
Translates to: FPILFTVEAILHNWFCLHEDWER*SKQTSC
Trigger: ACAAGATGTCTGTTTGCTGCACCTCTCCCAATCCTC...GTGAAGACAAAACCAGTTGTGTAATATTGCCTCTACGGTAAATAATATTGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp GAAGACATGGAAGAATTGAAGGAGCCAGTAGGGTCAAGGTCACATATACACAAAGTGATTCTATATTTGTaGACATTCATGCCAACACTC +
Preference number: 2 (lower is better)
Translates to: EDMEELKEPVGSRSHIHKVILYL*TFMPTL
Trigger: GAGTGTTGGCATGAATGTGCACAAATATAGAATCAC...TTTGTGTATATGTGACCTTGACCCTACTGGCTCCTTCAATTCTTCCATGTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 90 bp TCATCCTTGTGGTTGATTTTAGGCACTTACTTTCAACTTCTGTATTaGCTTTTTCCAGCAAGACATGCAGTTATCTGGATCAGAGGAATG +
Preference number: 2 (lower is better)
Translates to: SSLWLILGTYFQLLY*LFPARHAVIWIRGM
Trigger: CATTCCTCTGATCCAGATAACTGCATGTCTTGCTGGAAAAAGCAAATACAGAAGTTGAAAGTAAGTGCCTAAAATCAACCACAAGGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000213727.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR GCA 90 bp GCCATGCTCTGTTACACATATATCTGGAGTCATGGATCCTTCCATGAATACTCTTATAGGATAATAAACTaGCTCAGCATAGCAGTATTC +
Preference number: 2 (lower is better)
Translates to: AMLCYTYIWSHGSFHEYSYRIIN*LSIAVF
Trigger: GAATACTGCTATGCTGAGGCAGTTTATTATCCTATA...AGAGTATTCATGGAAGGATCCATGACTCCAGATATATGTGTAACAGAGCATGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp ATTGCCACATCCAACAAAGAACTTCACCATGTATTTATGAACAGCATAGAAATCAGACATGCAGTTATCTaGATCAGAGGAATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: IATSNKELHHVFMNSIEIRHAVI*IRGMEE
Trigger: TTCTTCCATTCCTCTGATCCAGATAACTGCATGTCT...GATTTCTATGCTGTTCATAAATACATGGTGAAGTTCTTTGTTGGATGTGGCAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000213727.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CCA 90 bp ATTGCCACATCCAACAAAGAACTTCACCATGTATTTATGAACAGCATAGAAATCCTGCTTTCATCCTTGTaGTTGATTTTAGGCACTTAC +
Preference number: 2 (lower is better)
Translates to: IATSNKELHHVFMNSIEILLSSL*LILGTY
Trigger: GTAAGTGCCTAAAATCAACCACAAGGATGAAAGCAG...GATTTCTATGCTGTTCATAAATACATGGTGAAGTTCTTTGTTGGATGTGGCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR TCA 90 bp ATTGCCACATCCAACAAAGAACTTCACCATGTATTTATGAACAGCATAGAAATCACCAATAATGATAAATaGCTGCTTTCATCCTTGTGG +
Preference number: 2 (lower is better)
Translates to: IATSNKELHHVFMNSIEITNNDK*LLSSLW
Trigger: CCACAAGGATGAAAGCAGTCATTTATCATTATTGGT...GATTTCTATGCTGTTCATAAATACATGGTGAAGTTCTTTGTTGGATGTGGCAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGGGGCCTCTTCTCCCATaGATGCCCGACAAGGCCATC +
Preference number: 3 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLGPLLP*MPDKAI
Trigger: GATGGCCTTGTCGGGCATCAATGGGAGAAGAGGCCC...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCTCCCTAACTCCTCCATaGGGGTCCCTGTGCTCACTC +
Preference number: 3 (lower is better)
Translates to: PFASMRILLYSLTHSHLISLTPP*GSLCSL
Trigger: GAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGA...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp GGCGGTAGTGTCTGGGTCTGGTGTCTGTACATAGGATaGATCCCCAGGTGGAGCAGTCTCCAGATAGCCTTA +
Preference number: 3 (lower is better)
Translates to: GGSVWVWCLYIG*IPRWSSLQIAL
Trigger: TAAGGCTATCTGGAGACTGCTCCACCTGGGGATCCATCCTATGTACAGACACCAGACCCAGACACTACCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp TTGAGCCTTCACAGGACCAAGGGCCTCTTCTCCCATTaGTGCCCGACAAGGCCATCCTCTGGTACATATGTG +
Preference number: 3 (lower is better)
Translates to: LSLHRTKGLFSH*CPTRPSSGTYV
Trigger: CACATATGTACCAGAGGATGGCCTTGTCGGGCATCAATGGGAGAAGAGGCCCTTGGTCCTGTGAAGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp CTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTaGCTATCAGTATCTGCATCTGTATTGGTCAGGTGC +
Preference number: 3 (lower is better)
Translates to: LFHWGPWAQSNG*LSVSASVLVRC
Trigger: GCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR GCA 72 bp TCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTaGATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTC +
Preference number: 3 (lower is better)
Translates to: SLGSVQWLTISI*ICIGQVLVEPL
Trigger: GAGGGGCTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp TGGGTCTGGTGTCTGTACATAGGATGGATCCCCAGGTaGAGCAGTCTCCAGATAGCCTTACTTCAGTCTCTG +
Preference number: 3 (lower is better)
Translates to: WVWCLYIGWIPR*SSLQIALLQSL
Trigger: CAGAGACTGAAGTAAGGCTATCTGGAGACTGCTCCACCTGGGGATCCATCCTATGTACAGACACCAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGAAGAACTGCAAAGAATaGAGGCCAGCAATACCAAGG +
Preference number: 3 (lower is better)
Translates to: FPNSSIGVPVLTPMVGCEKNCKE*RPAIPR
Trigger: CCTTGGTATTGCTGGCCTCAATTCTTTGCAGTTCTT...CTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp CCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGTATCCACCTTAAGAACTGCAAAGAATaGAGGCCAGCAATACCAAGG +
Preference number: 3 (lower is better)
Translates to: PPLGSLCSLQWLAVSIHLKNCKE*RPAIPR
Trigger: CCTTGGTATTGCTGGCCTCAATTCTTTGCAGTTCTT...AAGGTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp ATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTTCCCTAACTCCTCCATaGGGGTCCCTGTGCTCACTC +
Preference number: 3 (lower is better)
Translates to: MNTLWLVAYPQEALGDLVSLTPP*GSLCSL
Trigger: GAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGA...AACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCCAACAGTGTCAGGGTTaGGTGTTTGCAGATGAGATG +
Preference number: 3 (lower is better)
Translates to: PFASMRILLYSLTHSHLIQQCQG*VFADEM
Trigger: CATCTCATCTGCAAACACCAAACCCTGACACTGTTG...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp CATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTaGGTATCCACCTTTGTATTTGTCAGGTCTGGCAGA +
Preference number: 3 (lower is better)
Translates to: HWGPCAHSNGWL*VSTFVFVRSGR
Trigger: TCTGCCAGACCTGACAAATACAAAGGTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp AGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTaGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCC +
Preference number: 3 (lower is better)
Translates to: SPMVDYQYLHLY*SGAGRAPQRTA
Trigger: GGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp CTAGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATaGTTGACTATCAGTATCTGCATCTGTATTGGTCAG +
Preference number: 3 (lower is better)
Translates to: LALPLGSLGSVQ*LTISICICIGQ
Trigger: CTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp CCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGTATCCACCTTACTTTGTCCCCATATTaGCTCTCCTGTGCATTTTGT +
Preference number: 3 (lower is better)
Translates to: PPLGSLCSLQWLAVSIHLTLSPY*LSCAFC
Trigger: ACAAAATGCACAGGAGAGCAAATATGGGGACAAAGT...AAGGTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp CTGCATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCCATACCAAAGATCTCCGGTTGGTaGATGTTGTTGTTCTTCCTA +
Preference number: 3 (lower is better)
Translates to: LHLYWSGAGRAPQRTAIPKISGW*MLLFFL
Trigger: TAGGAAGAACAACAACATCAACCAACCGGAGATCTT...TGGTATGGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp ATCTCTCTGCTCTCATATTTCCCTACACTGGAGCATTaGGCCTTCACAGGACCAAGGGCCTCTTCTCCCATT +
Preference number: 3 (lower is better)
Translates to: ISLLSYFPTLEH*AFTGPRASSPI
Trigger: AATGGGAGAAGAGGCCCTTGGTCCTGTGAAGGCTCAATGCTCCAGTGTAGGGAAATATGAGAGCAGAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp CTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATaGTTGGCTGTGAGTATCCACCTTTGTATTTGTCAG +
Preference number: 3 (lower is better)
Translates to: LTPPLGSLCSLQ*LAVSIHLCICQ
Trigger: CTGACAAATACAAAGGTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp AGGGTTTGGTGTTTGCAGATGAGATGGATCCCTAGTTaGGGAGGTCTCTGGATAGCCTTTCCTTCTGTCTCT +
Preference number: 3 (lower is better)
Translates to: RVWCLQMRWIPS*GGLWIAFPSVS
Trigger: AGAGACAGAAGGAAAGGCTATCCAGAGACCTCCCCAACTAGGGATCCATCTCATCTGCAAACACCAAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp CAAGCACTTCGTGGCATCTTCAACAGTGTCAGGGTTTaGTGTTTGCAGATGAGATGGATCCCTAGTTGGGGA +
Preference number: 3 (lower is better)
Translates to: QALRGIFNSVRV*CLQMRWIPSWG
Trigger: TCCCCAACTAGGGATCCATCTCATCTGCAAACACCAAACCCTGACACTGTTGAAGATGCCACGAAGTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCCCACATTGTCTGCCTTaGCATCCCTTATTTATTCTC +
Preference number: 3 (lower is better)
Translates to: PFASMRILLYSLTHSHLIPHCLP*HPLFIL
Trigger: GAGAATAAATAAGGGATGCAAAGGCAGACAATGTGG...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGAGACTCCTAGCAATGTaGGATATGAAGCCTAAAGTG +
Preference number: 3 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLRLLAM*DMKPKV
Trigger: CACTTTAGGCTTCATATCCAACATTGCTAGGAGTCT...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp GCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTAGTTaGTATTGTTCTTCCTATGGGGCTGCAATCCCCTTC +
Preference number: 3 (lower is better)
Translates to: AYPQEALGDLVS*YCSSYGAAIPF
Trigger: GAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAACTAACCAGATCACCCAGAGCTTCCTGAGGATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp GGATGTAGAGCAAGAGGAACACTCCTCCATTGCTGGTaGGAGTGCAAACTTGTGAAAACCACTTGGGTAATC +
Preference number: 3 (lower is better)
Translates to: GCRARGTLLHCW*ECKLVKTTWVI
Trigger: GATTACCCAAGTGGTTTTCACAAGTTTGCACTCCCACCAGCAATGGAGGAGTGTTCCTCTTGCTCTACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp TTCAACAGTGTCAGGGTTTGGTGTTTGCAGATGAGATaGATCCCTAGTTGGGGAGGTCTCTGGATAGCCTTT +
Preference number: 3 (lower is better)
Translates to: FNSVRVWCLQMR*IPSWGGLWIAF
Trigger: AAAGGCTATCCAGAGACCTCCCCAACTAGGGATCCATCTCATCTGCAAACACCAAACCCTGACACTGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCGTCTTCTGTCCTTTGTaGTGTGAATCTGAATCTATG +
Preference number: 3 (lower is better)
Translates to: PFASMRILLYSLTHSHLIVFCPL*CESESM
Trigger: CATAGATTCAGATTCACACAACAAAGGACAGAAGAC...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTCAATCCTTTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTAAGAACTGCAAAGAATaGAGGCCAGCAATACCAAGG +
Preference number: 3 (lower is better)
Translates to: FNPFPNSSIGVPVLTPMVKNCKE*RPAIPR
Trigger: CCTTGGTATTGCTGGCCTCAATTCTTTGCAGTTCTT...AACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAGGATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp ATAGGATGGATCCCCAGGTGGAGCAGTCTCCAGATAGCCTTACTTCAGTCTCTGGACTTTAAGCTCTGTTaGAGAAGAAGTGATACCACC +
Preference number: 3 (lower is better)
Translates to: IGWIPRWSSLQIALLQSLDFKLC*RRSDTT
Trigger: GGTGGTATCACTTCTTCTCAAACAGAGCTTAAAGTC...CAGAGACTGAAGTAAGGCTATCTGGAGACTGCTCCACCTGGGGATCCATCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp GTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGTCTCTGCTCCACACTTaGTCCCCATATTTGCTCTCC +
Preference number: 3 (lower is better)
Translates to: VQWLTISICICIGQVLVESLLHT*SPYLLS
Trigger: GGAGAGCAAATATGGGGACAAAGTGTGGAGCAGAGA...CTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTCAATCCTTTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTTGTGAGTATCCACCTTaGTATTTGTCAGGTCTGGCA +
Preference number: 3 (lower is better)
Translates to: FNPFPNSSIGVPVLTPMVCEYPP*YLSGLA
Trigger: TGCCAGACCTGACAAATACAAAGGTGGATACTCACA...AACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAGGATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCTCTGTTCCATTTTTGTaGTTGTTGTTGTTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: PFASMRILLYSLTHSHLISVPFL*LLLLSL
Trigger: CAGGGACAACAACAACAACAACAAAAATGGAACAGA...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGGTCTCTGTTCCATTTTaGTTGTTGTTGTTGTTGTCC +
Preference number: 3 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLVSVPF*LLLLLS
Trigger: GGACAACAACAACAACAACAAAAATGGAACAGAGAC...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTGCTCTCCTGTGCATTTaGTTCCCCTTTCTAAGAAGG +
Preference number: 3 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFALLCI*FPFLRR
Trigger: CCTTCTTAGAAAGGGGAACAAAATGCACAGGAGAGC...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp ATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTTATCCACCTTTGTATTaGTCAGGTCTGGCAGAGACC +
Preference number: 3 (lower is better)
Translates to: MNTLWLVAYPQEALGDLVYPPLY*SGLAET
Trigger: GGTCTCTGCCAGACCTGACAAATACAAAGGTGGATA...AACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTTATCCACCTTTGTATTaGTCAGGTCTGGCAGAGACC +
Preference number: 3 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFYPPLY*SGLAET
Trigger: GGTCTCTGCCAGACCTGACAAATACAAAGGTGGATA...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp ATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTGGCTCAGTCCAATGGTaGACTATCAGTATCTGCATC +
Preference number: 3 (lower is better)
Translates to: MNTLWLVAYPQEALGDLVGSVQW*TISICI
Trigger: GATGCAGATACTGATAGTCAACCATTGGACTGAGCC...AACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR GCA 72 bp AAGGACCTCCCCTCCTATTCATGCCAACTAAGGCCATaGTCTGTTACACATATATCTGGAGTCATGGATCCT +
Preference number: 3 (lower is better)
Translates to: KDLPSYSCQLRP*SVTHISGVMDP
Trigger: AGGATCCATGACTCCAGATATATGTGTAACAGAGCATGGCCTTAGTTGGCATGAATAGGAGGGGAGGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp CAAGGATGGAGGTACAGGGTTTCACAGGGGGACTGTTaGACATTAGTGGTTTCTGGAGTAGAAGATGTAATC +
Preference number: 3 (lower is better)
Translates to: QGWRYRVSQGDC*TLVVSGVEDVI
Trigger: GATTACATCTTCTACTCCAGAAACCACTAATGTCCAACAGTCCCCCTGTGAAACCCTGTACCTCCATCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTCAATCCTTTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTTGTTCCTATGTCTGTTaGTGTACTCCTATGTGTATC +
Preference number: 3 (lower is better)
Translates to: FNPFPNSSIGVPVLTPMVCSYVC*CTPMCI
Trigger: GATACACATAGGAGTACACAAACAGACATAGGAACA...AACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAGGATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTTGGTCTTCCTTCTTCTaGAGCTTCATGCATCCCTTT +
Preference number: 3 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFWSSFF*SFMHPF
Trigger: AAAGGGATGCATGAAGCTCAAGAAGAAGGAAGACCA...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp GTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGAAAGGGTGGGAGTACTaGGAGAGACAACTGATTTTC +
Preference number: 3 (lower is better)
Translates to: VQWLTISICICIGQVLVEKGWEY*ERQLIF
Trigger: GAAAATCAGTTGTCTCTCCAAGTACTCCCACCCTTT...CTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp TCCTTCTATTCCTCTTCAGTACTCAGGGAACCAAAGTaGGTGGCACAAAGAATTAGGTCAGAGGATTGGGAG +
Preference number: 3 (lower is better)
Translates to: SFYSSSVLREPK*VAQRIRSEDWE
Trigger: CTCCCAATCCTCTGACCTAATTCTTTGTGCCACTCACTTTGGTTCCCTGAGTACTGAAGAGGAATAGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR GCA 72 bp GTGGCACAAAGAATTAGGTCAGAGGATTGGGAGAGGTaGAGCAAACAGACATCTTGTGAACATGATACAGCT +
Preference number: 3 (lower is better)
Translates to: VAQRIRSEDWER*SKQTSCEHDTA
Trigger: AGCTGTATCATGTTCACAAGATGTCTGTTTGCTGCACCTCTCCCAATCCTCTGACCTAATTCTTTGTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR GCA 72 bp AGAGCAAGAGGAACACTCCTCCATTGCTGGTGGGAGTaGAAACTTGTGAAAACCACTTGGGTAATCAATTTG +
Preference number: 3 (lower is better)
Translates to: RARGTLLHCWWE*KLVKTTWVINL
Trigger: CAAATTGATTACCCAAGTGGTTTTCACAAGTTTGCACTCCCACCAGCAATGGAGGAGTGTTCCTCTTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp TCTATTCCTCTTCAGTACTCAGGGAACCAAAGTGAGTaGCACAAAGAATTAGGTCAGAGGATTGGGAGAGGT +
Preference number: 3 (lower is better)
Translates to: SIPLQYSGNQSE*HKELGQRIGRG
Trigger: ACCTCTCCCAATCCTCTGACCTAATTCTTTGTGCCACTCACTTTGGTTCCCTGAGTACTGAAGAGGAATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp ATATCTGGAGTCATGGATCCTTCCATGAATACTCTTTaGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGAT +
Preference number: 3 (lower is better)
Translates to: ISGVMDPSMNTL*LVAYPQEALGD
Trigger: ATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGAAGGATCCATGACTCCAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp ATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTGACTTTAAGCTCTGTTaGAGAAGAAGTGATACCACC +
Preference number: 3 (lower is better)
Translates to: MNTLWLVAYPQEALGDLVDFKLC*RRSDTT
Trigger: GGTGGTATCACTTCTTCTCAAACAGAGCTTAAAGTC...AACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp GAAGACATGGAAGAATTGAAGGAGCCAGTAGGGTCAAGGTCACATATACACAAAGCTCTCCTGTGCATTTaGTTCCCCTTTCTAAGAAGG +
Preference number: 3 (lower is better)
Translates to: EDMEELKEPVGSRSHIHKALLCI*FPFLRR
Trigger: CCTTCTTAGAAAGGGGAACAAAATGCACAGGAGAGC...TTTGTGTATATGTGACCTTGACCCTACTGGCTCCTTCAATTCTTCCATGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp ATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTCTCTATGTGTACTCTTaGGCTAGTGATTTAGTCCCT +
Preference number: 3 (lower is better)
Translates to: MNTLWLVAYPQEALGDLVLYVYS*ASDLVP
Trigger: AGGGACTAAATCACTAGCCAAAGAGTACACATAGAG...AACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTCCACATTGTCTGCCTTaGCATCCCTTATTTATTCTC +
Preference number: 3 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFPHCLP*HPLFIL
Trigger: GAGAATAAATAAGGGATGCAAAGGCAGACAATGTGG...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTAGACTCCTAGCAATGTaGGATATGAAGCCTAAAGTG +
Preference number: 3 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFRLLAM*DMKPKV
Trigger: CACTTTAGGCTTCATATCCAACATTGCTAGGAGTCT...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTTTGTTGTTGTTGTTGTaGTCCCTGTCTTTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFLLLLL*SLSFLW
Trigger: CCAAAGGAAAGACAGGGACAACAACAACAACAACAA...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp ACAGAATGGCCCACAGAGTGTTATAGAGAACATAGCCTGAGAGCTGACATTACCTGTTCCTATGTCTGTTaGTGTACTCCTATGTGTATC +
Preference number: 3 (lower is better)
Translates to: TEWPTECYREHSLRADITCSYVC*CTPMCI
Trigger: GATACACATAGGAGTACACAAACAGACATAGGAACA...GGTAATGTCAGCTCTCAGGCTATGTTCTCTATAACACTCTGTGGGCCATTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp GGTGAGTGCTCAATCCTTCTATTCCTCTTCAGTACTCAGGGAACCAAAGTGAGTGTCTTCTGTCCTTTGTaGTGTGAATCTGAATCTATG +
Preference number: 3 (lower is better)
Translates to: GECSILLFLFSTQGTKVSVFCPL*CESESM
Trigger: CATAGATTCAGATTCACACAACAAAGGACAGAAGAC...ACTCACTTTGGTTCCCTGAGTACTGAAGAGGAATAGAAGGATTGAGCACTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp GTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGGTCTTCTGTCCTTTGTaGTGTGAATCTGAATCTATG +
Preference number: 3 (lower is better)
Translates to: VQWLTISICICIGQVLVEVFCPL*CESESM
Trigger: CATAGATTCAGATTCACACAACAAAGGACAGAAGAC...CTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp AGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAACTTTGTCCCCATATTaGCTCTCCTGTGCATTTTGT +
Preference number: 3 (lower is better)
Translates to: SPMVDYQYLHLYWSGAGRTLSPY*LSCAFC
Trigger: ACAAAATGCACAGGAGAGCAAATATGGGGACAAAGT...TCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp GTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGGTCTCTGTTCCATTTTaGTTGTTGTTGTTGTTGTCC +
Preference number: 3 (lower is better)
Translates to: VQWLTISICICIGQVLVEVSVPF*LLLLLS
Trigger: GGACAACAACAACAACAACAAAAATGGAACAGAGAC...CTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp ATCAGAGAAGCTTCTTATTGTAGTTTGTGGTGGGGCTaGCTGTTGGGGAATGTTAACACAGAAACCCATAAC +
Preference number: 3 (lower is better)
Translates to: IREASYCSLWWG*LLGNVNTETHN
Trigger: GTTATGGGTTTCTGTGTTAACATTCCCCAACAGTCAGCCCCACCACAAACTACAATAAGAAGCTTCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp CTGTTACACATATATCTGGAGTCATGGATCCTTCCATaGATACTCTTTGGTTGGTGGCTTATCCTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: LLHIYLESWILP*ILFGWWLILRK
Trigger: CTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGAAGGATCCATGACTCCAGATATATGTGTAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR GCA 72 bp ACAGAAACCCATAACTGGGAATTAGTCATAGGTGAGTaGTCAATCCTTCTATTCCTCTTCAGTACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: TETHNWELVIGE*SILLFLFSTQG
Trigger: TCCCTGAGTACTGAAGAGGAATAGAAGGATTGAGCACTCACCTATGACTAATTCCCAGTTATGGGTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp TTCCCCTTTCTAAGAAGGACTGAAACACCCACATTTTaGTCTTCCTTCTTCTTGAGCTTCATGCATCCCTTT +
Preference number: 3 (lower is better)
Translates to: FPFLRRTETPTF*SSFFLSFMHPF
Trigger: AAAGGGATGCATGAAGCTCAAGAAGAAGGAAGACCAAAATGTGGGTGTTTCAGTCCTTCTTAGAAAGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp ATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTaGGTGATCTGGTTAGTTGATATTGTTCTTCCTATG +
Preference number: 3 (lower is better)
Translates to: ILFGWWLILRKL*VIWLVDIVLPM
Trigger: CATAGGAAGAACAATATCAACTAACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp ATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTTTGTTGTTGTTGTTGTaGTCCCTGTCTTTCTTTCAA +
Preference number: 3 (lower is better)
Translates to: MNTLWLVAYPQEALGDLVLLLLL*SLSFFQ
Trigger: TTGAAAGAAAGACAGGGACAACAACAACAACAACAA...AACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213516.2
3UTR TCA 72 bp AGACATCTTGTGAACATGATACAGCTGTTGCACACATaGGCTTACTTCACTGTGGTTATCTGCACAAGAACT +
Preference number: 3 (lower is better)
Translates to: RHLVNMIQLLHT*AYFTVVICTRT
Trigger: AGTTCTTGTGCAGATAACCACAGTGAAGTAAGCTCATGTGTGCAACAGCTGTATCATGTTCACAAGATGTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp GGTACAGGCAGTTATGAGCCATTTGATTCTAGGAATTaGATTGCTGTCTTCTCTAAAAGCAGCAAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: GTGSYEPFDSRN*IAVFSKSSKCS
Trigger: AGAGCACTTGCTGCTTTTAGAGAAGACAGCAATTCAATTCCTAGAATCAAATGGCTCATAACTGCCTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp CTGATTGAAATAGGCGTAGAGACATACAATAGAACATaGAGTAGAGTTTGGGGAATCCTGTGGAAGACATGG +
Preference number: 3 (lower is better)
Translates to: LIEIGVETYNRT*SRVWGILWKTW
Trigger: CCATGTCTTCCACAGGATTCCCCAAACTCTACTTCATGTTCTATTGTATGTCTCTACGCCTATTTCAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp ATTCCTAGCAGCTTTACTCATAACAGCCAGAAACTGTaGACAACACAGATGTCCCTCAAACAAAGAATGGAC +
Preference number: 3 (lower is better)
Translates to: IPSSFTHNSQKL*TTQMSLKQRMD
Trigger: GTCCATTCTTTGTTTGAGGGACATCTGTGTTGTTCACAGTTTCTGGCTGTTATGAGTAAAGCTGCTAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR GCA 72 bp CCACTCTCAGGCATATACCCAAAAGATGTTCCACTATaGCACAAGGAAACTTGTTCAACTATATTCCTAGCA +
Preference number: 3 (lower is better)
Translates to: PLSGIYPKDVPL*HKETCSTIFLA
Trigger: TGCTAGGAATATAGTTGAACAAGTTTCCTTGTGGCATAGTGGAACATCTTTTGGGTATATGCCTGAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR GCA 72 bp AACTGGAATATATCTACCTCAAGACCCAGATACATATaGCACTCTCAGGCATATACCCAAAAGATGTTCCAC +
Preference number: 3 (lower is better)
Translates to: NWNISTSRPRYI*HSQAYTQKMFH
Trigger: GTGGAACATCTTTTGGGTATATGCCTGAGAGTGGCATATGTATCTGGGTCTTGAGGTAGATATATTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp ATGCCAACTAAGGCCATGCTCTGTTACACATATATCTaGAGTCATGGATCCTTCCATGAATACTCTTTGGTT +
Preference number: 3 (lower is better)
Translates to: MPTKAMLCYTYI*SHGSFHEYSLV
Trigger: AACCAAAGAGTATTCATGGAAGGATCCATGACTCCAGATATATGTGTAACAGAGCATGGCCTTAGTTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp AGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGCAGTTATGAGCCATTaGATTCTAGGAATTGAATTG +
Preference number: 3 (lower is better)
Translates to: SPMVDYQYLHLYWSGAGRAVMSH*ILGIEL
Trigger: CAATTCAATTCCTAGAATCAAATGGCTCATAACTGC...TCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTTCTAAGAAGGACTGAAACACCCACATTTTGGTCTTCCTTCTTCTTGAGCTTCGACTTTAAGCTCTGTTaGAGAAGAAGTGATACCACC +
Preference number: 3 (lower is better)
Translates to: FLRRTETPTFWSSFFLSFDFKLC*RRSDTT
Trigger: GGTGGTATCACTTCTTCTCAAACAGAGCTTAAAGTC...GAAGCTCAAGAAGAAGGAAGACCAAAATGTGGGTGTTTCAGTCCTTCTTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp CAATATTACACAACTGGTTTTGTCTTCACTGGATACTaGTCCTATGTAGGTATGAACACAGAATGGCCCACA +
Preference number: 3 (lower is better)
Translates to: QYYTTGFVFTGY*SYVGMNTEWPT
Trigger: TGTGGGCCATTCTGTGTTCATACCTACATAGGATCAGTATCCAGTGAAGACAAAACCAGTTGTGTAATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp GACCCATGCAATGAAAGGGAGCCCACAATTGATAAATaGTACTCTGCTATATTTGCTGAGAGGATTTTAGTC +
Preference number: 3 (lower is better)
Translates to: DPCNEREPTIDK*YSAIFAERILV
Trigger: GACTAAAATCCTCTCAGCAAATATAGCAGAGTATCATTTATCAATTGTGGGCTCCCTTTCATTGCATGGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp TCAATTGAAAAAGACATGCTTAGACTTAGTACAACTTaGTATGCCAAGGCTGGTTGTTATGTATGCGAGGAC +
Preference number: 3 (lower is better)
Translates to: SIEKDMLRLSTT*YAKAGCYVCED
Trigger: GTCCTCGCATACATAACAACCAGCCTTGGCATATCAAGTTGTACTAAGTCTAAGCATGTCTTTTTCAATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR TCA 72 bp GCAATGTTGGATATGAAGCCTAAAGTGGCTATCTCCTaGAATCAGGCAATACTTCCAATAAAGGGATTTGAA +
Preference number: 3 (lower is better)
Translates to: AMLDMKPKVAIS*NQAILPIKGFE
Trigger: TTCAAATCCCTTTATTGGAAGTATTGCCTGATTTCAGGAGATAGCCACTTTAGGCTTCATATCCAACATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp GTAGAGGCAATATTACACAACTGGTTTTGTCTTCACTaGATACTGATCCTATGTAGGTATGAACACAGAATG +
Preference number: 3 (lower is better)
Translates to: VEAILHNWFCLH*ILILCRYEHRM
Trigger: CATTCTGTGTTCATACCTACATAGGATCAGTATCCAGTGAAGACAAAACCAGTTGTGTAATATTGCCTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp ACTTGGGTAATCAATTTGGCTGTTTCTCAGGAAAACTaGAATATATCTACCTCAAGACCCAGATACATATGC +
Preference number: 3 (lower is better)
Translates to: TWVINLAVSQEN*NISTSRPRYIC
Trigger: GCATATGTATCTGGGTCTTGAGGTAGATATATTCCAGTTTTCCTGAGAAACAGCCAAATTGATTACCCAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR-3UTR CAA 90 bp TTACATTTCAAATGTTATCTCCTTTCCTGGTACAACCCTGTGAAACTCCCTATCGCAGTTATGAGCCATTaGATTCTAGGAATTGAATTG +
Preference number: 3 (lower is better)
Translates to: LHFKCYLLSWYNPVKLPIAVMSH*ILGIEL
Trigger: CAATTCAATTCCTAGAATCAAATGGCTCATAACTGC...GATAGGGAGTTTCACAGGGTTGTACCAGGAAAGGAGATAACATTTGAAATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CCA 72 bp CCAATATTATTTACCGTAGAGGCAATATTACACAACTaGTTTTGTCTTCACTGGATACTGATCCTATGTAGG +
Preference number: 3 (lower is better)
Translates to: PILFTVEAILHN*FCLHWILILCR
Trigger: CCTACATAGGATCAGTATCCAGTGAAGACAAAACCAGTTGTGTAATATTGCCTCTACGGTAAATAATATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR TCA 90 bp CTGCATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCCATACCAGACACAACCCTGGAATaGGATGGCATTGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LHLYWSGAGRAPQRTAIPDTTLE*DGIVPR
Trigger: TCTGGGCACAATGCCATCTCATTCCAGGGTTGTGTC...TGGTATGGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR TCA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCGACACAACCCTGGAATaGGATGGCATTGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PFASMRILLYSLTHSHLIDTTLE*DGIVPR
Trigger: TCTGGGCACAATGCCATCTCATTCCAGGGTTGTGTC...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp GCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTaGACTATCAGTATCTGCATCTGTATTGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: ALPLGSLGSVQW*TISICICIGQV
Trigger: CACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp TTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGTGGAAGACACAACCCTaGAATGAGATGGCATTGTGC +
Preference number: 4 (lower is better)
Translates to: FPNSSIGVPVLTPMVGCEWKTQP*NEMALC
Trigger: GCACAATGCCATCTCATTCCAGGGTTGTGTCTTCCA...CTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp TCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTCCTCAGTGTGTAAATaGCAGGGTTCAGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: STGVPGLSPMVDYQYLHLSSVCK*QGSGWV
Trigger: CACCCATCCTGAACCCTGCCATTTACACACTGAGGA...CAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCTCCTCAGTGTGTAAATaGCAGGGTTCAGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: PFASMRILLYSLTHSHLISSVCK*QGSGWV
Trigger: CACCCATCCTGAACCCTGCCATTTACACACTGAGGA...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp CCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTATCTGTCCCAGGCCATaGCTACCAACAATACCATCT +
Preference number: 4 (lower is better)
Translates to: PLGSLGSVQWLTISICICICPRP*LPTIPS
Trigger: AGATGGTATTGTTGGTAGCCATGGCCTGGGACAGAT...ACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp TTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGTGGCACCGTAGGAAATaGCCACATGTACACAAAGAT +
Preference number: 4 (lower is better)
Translates to: FPNSSIGVPVLTPMVGCEWHRRK*PHVHKD
Trigger: ATCTTTGTGTACATGTGGCCATTTCCTACGGTGCCA...CTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp GGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCCTCAGTGTGTAAATaGCAGGGTTCAGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: GVPGLSPMVDYQYLHLYWSSVCK*QGSGWV
Trigger: CACCCATCCTGAACCCTGCCATTTACACACTGAGGA...CCAATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp ATAGGATGGATCCCCAGGTGGAGCAGTCTCCAGATAGCCTTACTTCAGTCTCTGTCCTCAGTGTGTAAATaGCAGGGTTCAGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: IGWIPRWSSLQIALLQSLSSVCK*QGSGWV
Trigger: CACCCATCCTGAACCCTGCCATTTACACACTGAGGA...CAGAGACTGAAGTAAGGCTATCTGGAGACTGCTCCACCTGGGGATCCATCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp ACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTaGGCTGTGAGTATCCACCTTTGTATTTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: TPPLGSLCSLQW*AVSIHLCICQV
Trigger: GACCTGACAAATACAAAGGTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp CCTTCAGTTACTTCAATCCTTTCCCTAACTCCTCCATaGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PSVTSILSLTPP*GSLCSLQWLAV
Trigger: CACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAGGATTGAAGTAACTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp CATCTCTCTGCTCTCATATTTCCCTACACTGGAGCATaGAGCCTTCACAGGACCAAGGGCCTCTTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: HLSALIFPYTGA*SLHRTKGLFSH
Trigger: ATGGGAGAAGAGGCCCTTGGTCCTGTGAAGGCTCAATGCTCCAGTGTAGGGAAATATGAGAGCAGAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR TCA 90 bp CAGCAAGCACTTCGTGGCATCTTCAACAGTGTCAGGGTTTGGTGTTTGCAGATGACTACCACAGAGATGTaGGCAGAAAGCGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: QQALRGIFNSVRVWCLQMTTTEM*AESVER
Trigger: CCTCTCTACGCTTTCTGCTCACATCTCTGTGGTAGT...CATCTGCAAACACCAAACCCTGACACTGTTGAAGATGCCACGAAGTGCTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR TCA 90 bp TTCAATCCTTTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTACTACCACAGAGATGTaGGCAGAAAGCGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: FNPFPNSSIGVPVLTPMVTTTEM*AESVER
Trigger: CCTCTCTACGCTTTCTGCTCACATCTCTGTGGTAGT...AACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAAAGGATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp CTGCATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCCATACCACAATACCATCTCAGTTaGCCCAAGAACATGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LHLYWSGAGRAPQRTAIPQYHLS*PKNMKN
Trigger: GTTCTTCATGTTCTTGGGGCAACTGAGATGGTATTG...TGGTATGGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp CTGCATCTGTATTGGTCAGGTGCTGGTAGAGCCCCTCAGAGGACAGCCATACCAGCAGTAACCATGAACTaGATTTTCTTGGGGTCTATG +
Preference number: 4 (lower is better)
Translates to: LHLYWSGAGRAPQRTAIPAVTMN*IFLGSM
Trigger: CATAGACCCCAAGAAAATGCAGTTCATGGTTACTGC...TGGTATGGCTGTCCTCTGAGGGGCTCTACCAGCACCTGACCAATACAGATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp TTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGGCAGTAACCATGAACTaGATTTTCTTGGGGTCTATG +
Preference number: 4 (lower is better)
Translates to: FPNSSIGVPVLTPMVGCEAVTMN*IFLGSM
Trigger: CATAGACCCCAAGAAAATGCAGTTCATGGTTACTGC...CTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp CCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGTATCCACCTTGCAGTAACCATGAACTaGATTTTCTTGGGGTCTATG +
Preference number: 4 (lower is better)
Translates to: PPLGSLCSLQWLAVSIHLAVTMN*IFLGSM
Trigger: CATAGACCCCAAGAAAATGCAGTTCATGGTTACTGC...AAGGTGGATACTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp TCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTGGCACCGTAGGAAATaGCCACATGTACACAAAGAT +
Preference number: 4 (lower is better)
Translates to: STGVPGLSPMVDYQYLHLWHRRK*PHVHKD
Trigger: ATCTTTGTGTACATGTGGCCATTTCCTACGGTGCCA...CAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp CTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTTCCTCAGTGTGTAAATaGCAGGGTTCAGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: LGSLGSVQWLTISICICISSVCK*QGSGWV
Trigger: CACCCATCCTGAACCCTGCCATTTACACACTGAGGA...AATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp GTGCTCACTCCAATGGTTGGCTGTGAGTATCCACCTTaGTATTTGTCAGGTCTGGCAGAGACCCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VLTPMVGCEYPP*YLSGLAETLKR
Trigger: TCTCTTGAGGGTCTCTGCCAGACCTGACAAATACAAAGGTGGATACTCACAGCCAACCATTGGAGTGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp TGTGGCTGCAGTGATGGGTCCCTCTATGTGTACTCTTaGGCTAGTGATTTAGTCCCTGAGAGTTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: CGCSDGSLYVYS*ASDLVPESSGG
Trigger: ACCACCAGAACTCTCAGGGACTAAATCACTAGCCAAAGAGTACACATAGAGGGACCCATCACTGCAGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp CCCTTTGCCTCTATGAGGATCCTCCTTTACTCACTCACCCACTCCCACCTCATCAATGAGATGGCATTGTaGCCAGAAGACAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: PFASMRILLYSLTHSHLINEMAL*PEDRSE
Trigger: TTCTGATCTGTCTTCTGGGCACAATGCCATCTCATT...GATGAGGTGGGAGTGGGTGAGTGAGTAAAGGAGGATCCTCATAGAGGCAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp CTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTTGGAAGACACAACCCTaGAATGAGATGGCATTGTGC +
Preference number: 4 (lower is better)
Translates to: LGSLGSVQWLTISICICIWKTQP*NEMALC
Trigger: GCACAATGCCATCTCATTCCAGGGTTGTGTCTTCCA...AATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp CTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTATCTGTCCCAGGCCATaGCTACCAACAATACCATCT +
Preference number: 4 (lower is better)
Translates to: LGSLGSVQWLTISICICIICPRP*LPTIPS
Trigger: AGATGGTATTGTTGGTAGCCATGGCCTGGGACAGAT...AATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp TGGATCCCTAGTTGGGGAGGTCTCTGGATAGCCTTTCCTTCTGTCTCTGTTCCATGGCACCGTAGGAAATaGCCACATGTACACAAAGAT +
Preference number: 4 (lower is better)
Translates to: WIPSWGGLWIAFPSVSVPWHRRK*PHVHKD
Trigger: ATCTTTGTGTACATGTGGCCATTTCCTACGGTGCCA...TGGAACAGAGACAGAAGGAAAGGCTATCCAGAGACCTCCCCAACTAGGGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp ATAGGATGGATCCCCAGGTGGAGCAGTCTCCAGATAGCCTTACTTCAGTCTCTGTGGCACCGTAGGAAATaGCCACATGTACACAAAGAT +
Preference number: 4 (lower is better)
Translates to: IGWIPRWSSLQIALLQSLWHRRK*PHVHKD
Trigger: ATCTTTGTGTACATGTGGCCATTTCCTACGGTGCCA...CAGAGACTGAAGTAAGGCTATCTGGAGACTGCTCCACCTGGGGATCCATCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp ACTCCAATGGTTGGCTGTGAGTATCCACCTTTGTATTaGTCAGGTCTGGCAGAGACCCTCAAGAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: TPMVGCEYPPLY*SGLAETLKRFL
Trigger: CAGGAATCTCTTGAGGGTCTCTGCCAGACCTGACAAATACAAAGGTGGATACTCACAGCCAACCATTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp TCTGGAGTCATGGATCCTTCCATGAATACTCTTTGGTaGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTG +
Preference number: 4 (lower is better)
Translates to: SGVMDPSMNTLW*VAYPQEALGDL
Trigger: CAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGAAGGATCCATGACTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR TCA 90 bp TGGATCCCTAGTTGGGGAGGTCTCTGGATAGCCTTTCCTTCTGTCTCTGTTCCAGTTGCCCCAAGAACATaGAGAACAAATATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WIPSWGGLWIAFPSVSVPVAPRT*RTNIWK
Trigger: CTTCCAGATATTTGTTCTTCATGTTCTTGGGGCAAC...TGGAACAGAGACAGAAGGAAAGGCTATCCAGAGACCTCCCCAACTAGGGATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR TCA 90 bp ACAGAATGGCCCACAGAGTGTTATAGAGAACATAGCCTGAGAGCTGACATTACCACTACCACAGAGATGTaGGCAGAAAGCGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TEWPTECYREHSLRADITTTTEM*AESVER
Trigger: CCTCTCTACGCTTTCTGCTCACATCTCTGTGGTAGT...GGTAATGTCAGCTCTCAGGCTATGTTCTCTATAACACTCTGTGGGCCATTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp GGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGAATGAGATGGCATTGTaGCCAGAAGACAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: GVPGLSPMVDYQYLHLYWNEMAL*PEDRSE
Trigger: TTCTGATCTGTCTTCTGGGCACAATGCCATCTCATT...CCAATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp GGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGGCAGTAACCATGAACTaGATTTTCTTGGGGTCTATG +
Preference number: 4 (lower is better)
Translates to: GVPGLSPMVDYQYLHLYWAVTMN*IFLGSM
Trigger: CATAGACCCCAAGAAAATGCAGTTCATGGTTACTGC...CCAATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR TCA 90 bp GCCATGCTCTGTTACACATATATCTGGAGTCATGGATCCTTCCATGAATACTCTGACACAACCCTGGAATaGGATGGCATTGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AMLCYTYIWSHGSFHEYSDTTLE*DGIVPR
Trigger: TCTGGGCACAATGCCATCTCATTCCAGGGTTGTGTC...AGAGTATTCATGGAAGGATCCATGACTCCAGATATATGTGTAACAGAGCATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp CTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTAATGAGATGGCATTGTaGCCAGAAGACAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: LGSLGSVQWLTISICICINEMAL*PEDRSE
Trigger: TTCTGATCTGTCTTCTGGGCACAATGCCATCTCATT...AATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp CTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTCAATACCATCTCAGTTaGCCCAAGAACATGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LGSLGSVQWLTISICICIQYHLS*PKNMKN
Trigger: GTTCTTCATGTTCTTGGGGCAACTGAGATGGTATTG...AATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp GTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAGATCTGTCCCAGGCCATaGCTACCAACAATACCATCT +
Preference number: 4 (lower is better)
Translates to: VQWLTISICICIGQVLVEICPRP*LPTIPS
Trigger: AGATGGTATTGTTGGTAGCCATGGCCTGGGACAGAT...CTCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp TTGATATTGTTCTTCCTATGGGGCTGCAATCCCCTTCAGCTCCTTCAGTCCTTTATCTGTCCCAGGCCATaGCTACCAACAATACCATCT +
Preference number: 4 (lower is better)
Translates to: LILFFLWGCNPLQLLQSFICPRP*LPTIPS
Trigger: AGATGGTATTGTTGGTAGCCATGGCCTGGGACAGAT...AAAGGACTGAAGGAGCTGAAGGGGATTGCAGCCCCATAGGAAGAACAATATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp CCAAGGATGGAGGTACAGGGTTTCACAGGGGGACTGTaGGACATTAGTGGTTTCTGGAGTAGAAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: PRMEVQGFTGGL*DISGFWSRRCN
Trigger: ATTACATCTTCTACTCCAGAAACCACTAATGTCCAACAGTCCCCCTGTGAAACCCTGTACCTCCATCCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp CTTCACTGTGGTTATCTGCACAAGAACTGCAAAGAATaGAGGCCAGCAATACCAAGGATGGAGGTACAGGGT +
Preference number: 4 (lower is better)
Translates to: LHCGYLHKNCKE*RPAIPRMEVQG
Trigger: ACCCTGTACCTCCATCCTTGGTATTGCTGGCCTCAATTCTTTGCAGTTCTTGTGCAGATAACCACAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR TCA 90 bp GCCATGCTCTGTTACACATATATCTGGAGTCATGGATCCTTCCATGAATACTCTACTACCACAGAGATGTaGGCAGAAAGCGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: AMLCYTYIWSHGSFHEYSTTTEM*AESVER
Trigger: CCTCTCTACGCTTTCTGCTCACATCTCTGTGGTAGT...AGAGTATTCATGGAAGGATCCATGACTCCAGATATATGTGTAACAGAGCATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp TCCATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGCAATACCATCTCAGTTaGCCCAAGAACATGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SMNTLWLVAYPQEALGDLQYHLS*PKNMKN
Trigger: GTTCTTCATGTTCTTGGGGCAACTGAGATGGTATTG...CAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp CTGTGGTTATCTGCACAAGAACTGCAAAGAATTGAGGCCAGCAATACCAAGGATTGGAAGACACAACCCTaGAATGAGATGGCATTGTGC +
Preference number: 4 (lower is better)
Translates to: LWLSAQELQRIEASNTKDWKTQP*NEMALC
Trigger: GCACAATGCCATCTCATTCCAGGGTTGTGTCTTCCA...ATCCTTGGTATTGCTGGCCTCAATTCTTTGCAGTTCTTGTGCAGATAACCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp ATCCTCAGGAAGCTCTGGGTGATCTGGTTAGTTGATATTGTTCTTCCTATGGGGTGGCACCGTAGGAAATaGCCACATGTACACAAAGAT +
Preference number: 4 (lower is better)
Translates to: ILRKLWVIWLVDIVLPMGWHRRK*PHVHKD
Trigger: ATCTTTGTGTACATGTGGCCATTTCCTACGGTGCCA...CCCCATAGGAAGAACAATATCAACTAACCAGATCACCCAGAGCTTCCTGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp CCACACTTTGTCCCCATATTTGCTCTCCTGTGCATTTaGTTCCCCTTTCTAAGAAGGACTGAAACACCCACA +
Preference number: 4 (lower is better)
Translates to: PHFVPIFALLCI*FPFLRRTETPT
Trigger: TGTGGGTGTTTCAGTCCTTCTTAGAAAGGGGAACAAAATGCACAGGAGAGCAAATATGGGGACAAAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp ACAGAATGGCCCACAGAGTGTTATAGAGAACATAGCCTGAGAGCTGACATTACCAATGAGATGGCATTGTaGCCAGAAGACAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: TEWPTECYREHSLRADITNEMAL*PEDRSE
Trigger: TTCTGATCTGTCTTCTGGGCACAATGCCATCTCATT...GGTAATGTCAGCTCTCAGGCTATGTTCTCTATAACACTCTGTGGGCCATTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp ATCCTCAGGAAGCTCTGGGTGATCTGGTTAGTTGATATTGTTCTTCCTATGGGGCAATACCATCTCAGTTaGCCCAAGAACATGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ILRKLWVIWLVDIVLPMGQYHLS*PKNMKN
Trigger: GTTCTTCATGTTCTTGGGGCAACTGAGATGGTATTG...CCCCATAGGAAGAACAATATCAACTAACCAGATCACCCAGAGCTTCCTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp GCCATGCTCTGTTACACATATATCTGGAGTCATGGATCCTTCCATGAATACTCTTGGAAGACACAACCCTaGAATGAGATGGCATTGTGC +
Preference number: 4 (lower is better)
Translates to: AMLCYTYIWSHGSFHEYSWKTQP*NEMALC
Trigger: GCACAATGCCATCTCATTCCAGGGTTGTGTCTTCCA...AGAGTATTCATGGAAGGATCCATGACTCCAGATATATGTGTAACAGAGCATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp GAAGACATGGAAGAATTGAAGGAGCCAGTAGGGTCAAGGTCACATATACACAAAATCTGTCCCAGGCCATaGCTACCAACAATACCATCT +
Preference number: 4 (lower is better)
Translates to: EDMEELKEPVGSRSHIHKICPRP*LPTIPS
Trigger: AGATGGTATTGTTGGTAGCCATGGCCTGGGACAGAT...TTTGTGTATATGTGACCTTGACCCTACTGGCTCCTTCAATTCTTCCATGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp AGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGTCAGGTGCTGGTAGAAATGAGATGGCATTGTaGCCAGAAGACAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: SPMVDYQYLHLYWSGAGRNEMAL*PEDRSE
Trigger: TTCTGATCTGTCTTCTGGGCACAATGCCATCTCATT...TCTACCAGCACCTGACCAATACAGATGCAGATACTGATAGTCAACCATTGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp CTGTGGTTATCTGCACAAGAACTGCAAAGAATTGAGGCCAGCAATACCAAGGATGCAGTAACCATGAACTaGATTTTCTTGGGGTCTATG +
Preference number: 4 (lower is better)
Translates to: LWLSAQELQRIEASNTKDAVTMN*IFLGSM
Trigger: CATAGACCCCAAGAAAATGCAGTTCATGGTTACTGC...ATCCTTGGTATTGCTGGCCTCAATTCTTTGCAGTTCTTGTGCAGATAACCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CCA 90 bp TTTCTAAGAAGGACTGAAACACCCACATTTTGGTCTTCCTTCTTCTTGAGCTTCTGGAAGACACAACCCTaGAATGAGATGGCATTGTGC +
Preference number: 4 (lower is better)
Translates to: FLRRTETPTFWSSFFLSFWKTQP*NEMALC
Trigger: GCACAATGCCATCTCATTCCAGGGTTGTGTCTTCCA...GAAGCTCAAGAAGAAGGAAGACCAAAATGTGGGTGTTTCAGTCCTTCTTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR TCA 90 bp TTCCCAATATTATTTACCGTAGAGGCAATATTACACAACTGGTTTTGTCTTCACGACACAACCCTGGAATaGGATGGCATTGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FPILFTVEAILHNWFCLHDTTLE*DGIVPR
Trigger: TCTGGGCACAATGCCATCTCATTCCAGGGTTGTGTC...GTGAAGACAAAACCAGTTGTGTAATATTGCCTCTACGGTAAATAATATTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp AGGACTGAAACACCCACATTTTGGTCTTCCTTCTTCTaGAGCTTCATGCATCCCTTTATTCTTAAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: RTETPTFWSSFF*SFMHPFILKWD
Trigger: ATCCCACTTAAGAATAAAGGGATGCATGAAGCTCAAGAAGAAGGAAGACCAAAATGTGGGTGTTTCAGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp CATTGTGAGACCCATGCAATGAAAGGGAGCCCACAATaGATAAATGATACTCTGCTATATTTGCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HCETHAMKGSPQ*INDTLLYLLRG
Trigger: TCCTCTCAGCAAATATAGCAGAGTATCATTTATCAATTGTGGGCTCCCTTTCATTGCATGGGTCTCACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp TTTCCTTTGGACAGGAACACCACTGGGTTAAAATTTTaGAGATGGCTTCTATCTCATACCTGTCAGAATGGC +
Preference number: 4 (lower is better)
Translates to: FPLDRNTTGLKF*RWLLSHTCQNG
Trigger: GCCATTCTGACAGGTATGAGATAGAAGCCATCTCAAAAATTTTAACCCAGTGGTGTTCCTGTCCAAAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR TCA 90 bp ATTGCCACATCCAACAAAGAACTTCACCATGTATTTATGAACAGCATAGAAATCACTACCACAGAGATGTaGGCAGAAAGCGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: IATSNKELHHVFMNSIEITTTEM*AESVER
Trigger: CCTCTCTACGCTTTCTGCTCACATCTCTGTGGTAGT...GATTTCTATGCTGTTCATAAATACATGGTGAAGTTCTTTGTTGGATGTGGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR GCA 90 bp TTACATTTCAAATGTTATCTCCTTTCCTGGTACAACCCTGTGAAACTCCCTATCCAATACCATCTCAGTTaGCCCAAGAACATGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LHFKCYLLSWYNPVKLPIQYHLS*PKNMKN
Trigger: GTTCTTCATGTTCTTGGGGCAACTGAGATGGTATTG...GATAGGGAGTTTCACAGGGTTGTACCAGGAAAGGAGATAACATTTGAAATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp GAGTGCAAACTTGTGAAAACCACTTGGGTAATCAATTaGGCTGTTTCTCAGGAAAACTGGAATATATCTACC +
Preference number: 4 (lower is better)
Translates to: ECKLVKTTWVIN*AVSQENWNIST
Trigger: GGTAGATATATTCCAGTTTTCCTGAGAAACAGCCAAATTGATTACCCAAGTGGTTTTCACAAGTTTGCACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
3UTR CAA 72 bp ATACCCAAAAGATGTTCCACTATGCCACAAGGAAACTaGTTCAACTATATTCCTAGCAGCTTTACTCATAAC +
Preference number: 4 (lower is better)
Translates to: IPKRCSTMPQGN*FNYIPSSFTHN
Trigger: GTTATGAGTAAAGCTGCTAGGAATATAGTTGAACAAGTTTCCTTGTGGCATAGTGGAACATCTTTTGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CAA 90 bp TTCCCTAACTCCTCCATTGGGGTCCCTGTGCTCACTCCAATGGTTGGCTGTGAGATGAACTGCATTTTCTaGGGGTCTATGCAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: FPNSSIGVPVLTPMVGCEMNCIF*GSMQAS
Trigger: ACTGGCCTGCATAGACCCCAAGAAAATGCAGTTCAT...CTCACAGCCAACCATTGGAGTGAGCACAGGGACCCCAATGGAGGAGTTAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CAA 90 bp AGCTCTTCCACTGGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGACAATACCATCTCAGTaGCCCCAAGAACATGAAGAA +
Preference number: 5 (lower is better)
Translates to: SSSTGVPGLSPMVDYQYLTIPSQ*PQEHEE
Trigger: TTCTTCATGTTCTTGGGGCAACTGAGATGGTATTGT...CAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCCAGTGGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CAA 90 bp GGGGTCCCTGGGCTCAGTCCAATGGTTGACTATCAGTATCTGCATCTGTATTGGACAATACCATCTCAGTaGCCCCAAGAACATGAAGAA +
Preference number: 5 (lower is better)
Translates to: GVPGLSPMVDYQYLHLYWTIPSQ*PQEHEE
Trigger: TTCTTCATGTTCTTGGGGCAACTGAGATGGTATTGT...CCAATACAGATGCAGATACTGATAGTCAACCATTGGACTGAGCCCAGGGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CAA 90 bp TCCATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGATGAACTGCATTTTCTaGGGGTCTATGCAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: SMNTLWLVAYPQEALGDLMNCIF*GSMQAS
Trigger: ACTGGCCTGCATAGACCCCAAGAAAATGCAGTTCAT...CAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CAA 90 bp CAGCAAGCACTTCGTGGCATCTTCAACAGTGTCAGGGTTTGGTGTTTGCAGATGACAATACCATCTCAGTaGCCCCAAGAACATGAAGAA +
Preference number: 5 (lower is better)
Translates to: QQALRGIFNSVRVWCLQMTIPSQ*PQEHEE
Trigger: TTCTTCATGTTCTTGGGGCAACTGAGATGGTATTGT...CATCTGCAAACACCAAACCCTGACACTGTTGAAGATGCCACGAAGTGCTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CAA 90 bp ACAGAATGGCCCACAGAGTGTTATAGAGAACATAGCCTGAGAGCTGACATTACCATGAACTGCATTTTCTaGGGGTCTATGCAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: TEWPTECYREHSLRADITMNCIF*GSMQAS
Trigger: ACTGGCCTGCATAGACCCCAAGAAAATGCAGTTCAT...GGTAATGTCAGCTCTCAGGCTATGTTCTCTATAACACTCTGTGGGCCATTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CAA 90 bp ATGAATACTCTTTGGTTGGTGGCTTATCCTCAGGAAGCTCTGGGTGATCTGGTTACAATACCATCTCAGTaGCCCCAAGAACATGAAGAA +
Preference number: 5 (lower is better)
Translates to: MNTLWLVAYPQEALGDLVTIPSQ*PQEHEE
Trigger: TTCTTCATGTTCTTGGGGCAACTGAGATGGTATTGT...AACCAGATCACCCAGAGCTTCCTGAGGATAAGCCACCAACCAAAGAGTATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CAA 90 bp ATTGCCACATCCAACAAAGAACTTCACCATGTATTTATGAACAGCATAGAAATCATGAACTGCATTTTCTaGGGGTCTATGCAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: IATSNKELHHVFMNSIEIMNCIF*GSMQAS
Trigger: ACTGGCCTGCATAGACCCCAAGAAAATGCAGTTCAT...GATTTCTATGCTGTTCATAAATACATGGTGAAGTTCTTTGTTGGATGTGGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS-3UTR CAA 90 bp TTCCCAATATTATTTACCGTAGAGGCAATATTACACAACTGGTTTTGTCTTCACACAATACCATCTCAGTaGCCCCAAGAACATGAAGAA +
Preference number: 5 (lower is better)
Translates to: FPILFTVEAILHNWFCLHTIPSQ*PQEHEE
Trigger: TTCTTCATGTTCTTGGGGCAACTGAGATGGTATTGT...GTGAAGACAAAACCAGTTGTGTAATATTGCCTCTACGGTAAATAATATTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS CCA 90 bp ATCTCATTAGGACCACAAAAATTCAACTTGATAATAAACGCTAATTaGGTCACTGAATGTAAAAAGCCAATAACCCAAGCACCAGATAGA +
Preference number: 5 (lower is better)
Translates to: ISLGPQKFNLIINAN*VTECKKPITQAPDR
Trigger: TCTATCTGGTGCTTGGGTTATTGGCTTTTTACATTCAGTGACCCAATTAGCGTTTATTATCAAGTTGAATTTTTGTGGTCCTAATGAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000090330.2
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS CCA 72 bp GAACAAATATCTGGAAGACACAACCCTGGAATGAGATaGCATTGTGCCCAGAAGACAGATCAGAAATCATCT +
Preference number: 6 (lower is better)
Translates to: EQISGRHNPGMR*HCAQKTDQKSS
Trigger: AGATGATTTCTGATCTGTCTTCTGGGCACAATGCCATCTCATTCCAGGGTTGTGTCTTCCAGATATTTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000090330.2
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS TCA 72 bp ATGAAGAACAAATATCTGGAAGACACAACCCTGGAATaGGATGGCATTGTGCCCAGAAGACAGATCAGAAAT +
Preference number: 6 (lower is better)
Translates to: MKNKYLEDTTLE*DGIVPRRQIRN
Trigger: ATTTCTGATCTGTCTTCTGGGCACAATGCCATCTCATTCCAGGGTTGTGTCTTCCAGATATTTGTTCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000090330.2
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS CAA 72 bp ATGGCATTGTGCCCAGAAGACAGATCAGAAATCATCTaGGGTACAGTTAAGGTAGAAAGACATAAATCAATA +
Preference number: 6 (lower is better)
Translates to: MALCPEDRSEII*GTVKVERHKSI
Trigger: TATTGATTTATGTCTTTCTACCTTAACTGTACCCAAGATGATTTCTGATCTGTCTTCTGGGCACAATGCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000090330.2
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2
CDS CCA 72 bp GGACCACAAAAATTCAACTTGATAATAAACGCTAATTaGGTCACTGAATGTAAAAAGCCAATAACCCAAGCA +
Preference number: 6 (lower is better)
Translates to: GPQKFNLIINAN*VTECKKPITQA
Trigger: TGCTTGGGTTATTGGCTTTTTACATTCAGTGACCCAATTAGCGTTTATTATCAAGTTGAATTTTTGTGGTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000090330.2
ENSMUST00000213516.2
ENSMUST00000213727.2
ENSMUST00000214669.2
ENSMUST00000215210.2
ENSMUST00000216229.2