Pregenerated sensors for OLFR1277 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074965Ensembl transcript IDs: ENSMUST00000099619.6, ENSMUST00000214760.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTCGTaGGATGGCAAGCTTGTACAACCATTCTGGAAATCAGTCTGGTGG | + |
|
Preference number: 1 (lower is better) Translates to: CWRGCGERGTLLHCS*DGKLVQPFWKSVWW Trigger: CCACCAGACTGATTTCCAGAATGGTTGTACAAGCTTGCCATCCCACGAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR GCA 90 bp | AGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTaGTCGTGGGATGGCAAGCTTGTACAACCATTCTGGAAATCAGTC | + |
|
Preference number: 1 (lower is better) Translates to: SRCWRGCGERGTLLH*SWDGKLVQPFWKSV Trigger: GACTGATTTCCAGAATGGTTGTACAAGCTTGCCATCCCACGAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 90 bp | GCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTCGTGGGATaGCAAGCTTGTACAACCATTCTGGAAATCAGTCTGGTGGTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: ARMWRKRNTPPLLVG*QACTTILEISLVVP Trigger: AGGAACCACCAGACTGATTTCCAGAATGGTTGTACAAGCTTGCCATCCCACGAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR TCA 90 bp | TGCTTCCAAACGCTGACACCACTGCATACACTAGCAAGAATTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGCAGGGG | + |
|
Preference number: 1 (lower is better) Translates to: CFQTLTPLHTLARIC*KDPDIAVSCETMQG Trigger: CCCCTGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAATTCTTGCTAGTGTATGCAGTGGTGTCAGCGTTTGGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR TCA 90 bp | AGCTCTGTGGATGAAACCAGAAGCCTCTGCATCAATATAATGTTATaGAGGACGAGAGCCCTCTGGCCTTCAGAAAGCATAATACTGGAC | + |
|
Preference number: 1 (lower is better) Translates to: SSVDETRSLCINIML*RTRALWPSESIILD Trigger: GTCCAGTATTATGCTTTCTGAAGGCCAGAGGGCTCTCGTCCTTCATAACATTATATTGATGCAGAGGCTTCTGGTTTCATCCACAGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 90 bp | TCTCTAACTGCATATGTAGCAGAAGAAGGCCTAGTCAGCCATCATTaGGAAGAGAGGCTTCTTAGTCTTGCAAACTTTATAAGCCCCAGT | + |
|
Preference number: 1 (lower is better) Translates to: SLTAYVAEEGLVSHH*EERLLSLANFISPS Trigger: ACTGGGGCTTATAAAGTTTGCAAGACTAAGAAGCCTCTCTTCCCAATGATGGCTGACTAGGCCTTCTTCTGCTACATATGCAGTTAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 90 bp | TCGTGGGATGGCAAGCTTGTACAACCATTCTGGAAATCAGTCTGGTaGTTCCTCAGAAAATTAGAAAAAGTACTACCAGAAGATCCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: SWDGKLVQPFWKSVW*FLRKLEKVLPEDPA Trigger: TGCTGGATCTTCTGGTAGTACTTTTTCTAATTTTCTGAGGAACCACCAGACTGATTTCCAGAATGGTTGTACAAGCTTGCCATCCCACGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 90 bp | ACACTCCTCCATTGCTCGTGGGATGGCAAGCTTGTACAACCATTCTaGAAATCAGTCTGGTGGTTCCTCAGAAAATTAGAAAAAGTACTA | + |
|
Preference number: 1 (lower is better) Translates to: TLLHCSWDGKLVQPF*KSVWWFLRKLEKVL Trigger: TAGTACTTTTTCTAATTTTCTGAGGAACCACCAGACTGATTTCCAGAATGGTTGTACAAGCTTGCCATCCCACGAGCAATGGAGGAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR TCA 90 bp | CTACATTCCTGTCTGGAGGAAAAATTCAGTGGTCTATTCAGGATTTaGGATGGGTTCAGGGATTCAGTTGAAGAGTCAATCACCATCATA | + |
|
Preference number: 1 (lower is better) Translates to: LHSCLEEKFSGLFRI*DGFRDSVEESITII Trigger: TATGATGGTGATTGACTCTTCAACTGAATCCCTGAACCCATCTCAAATCCTGAATAGACCACTGAATTTTTCCTCCAGACAGGAATGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR TCA 90 bp | CAACAACAACAACAACAACAACAACAAAAAGGAAATGCTGAGAACTaGAGAGGTCATCTTCTCCATGAAGGCACATACCAATTGGTCAGC | + |
|
Preference number: 1 (lower is better) Translates to: QQQQQQQQQKGNAEN*RGHLLHEGTYQLVS Trigger: GCTGACCAATTGGTATGTGCCTTCATGGAGAAGATGACCTCTTCAGTTCTCAGCATTTCCTTTTTGTTGTTGTTGTTGTTGTTGTTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 90 bp | ATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATaGCCCGCAACAGAGGAATGGATACAGAAAATGTTGTACATTTAC | + |
|
Preference number: 1 (lower is better) Translates to: IAALFIIARSWKEPR*PATEEWIQKMLYIY Trigger: GTAAATGTACAACATTTTCTGTATCCATTCCTCTGTTGCGGGCCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR TCA 90 bp | ACTGGTTACATCATGGAACTTAAATCCAGTGATGGTAGACAGGCATaGTACAATGATACAACAGCAGCAAACAACAACAACAACAACAAC | + |
|
Preference number: 1 (lower is better) Translates to: TGYIMELKSSDGRQA*YNDTTAANNNNNNN Trigger: GTTGTTGTTGTTGTTGTTGTTTGCTGCTGTTGTATCATTGTATCATGCCTGTCTACCATCACTGGATTTAAGTTCCATGATGTAACCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 90 bp | TTCTCTTTCTGGCAAACCCTTACAAGATATCAAAGCAACAGCCCCTaGCTCAGTGAGGTATTAGTTTGCTTTATCTATTATGATGCTTTT | + |
|
Preference number: 1 (lower is better) Translates to: FSFWQTLTRYQSNSP*LSEVLVCFIYYDAF Trigger: AAAAGCATCATAATAGATAAAGCAAACTAATACCTCACTGAGCCAGGGGCTGTTGCTTTGATATCTTGTAAGGGTTTGCCAGAAAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 90 bp | TGTTATTATTGTTATACTTGGTTATTCCACCCTCACACACAAAAGTaGGAGGTCTTCATCCTATTGATGAAGTCACCATGTACTTCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: CYYCYTWLFHPHTQK*EVFILLMKSPCTSD Trigger: GTCTGAAGTACATGGTGACTTCATCAATAGGATGAAGACCTCCCACTTTTGTGTGTGAGGGTGGAATAACCAAGTATAACAATAATAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR GCA 90 bp | ACAAGATATCAAAGCAACAGCCCCTGGCTCAGTGAGGTATTAGTTTaGTTTATCTATTATGATGCTTTTCTTGTATCCTTTGGAATATCA | + |
|
Preference number: 1 (lower is better) Translates to: TRYQSNSPWLSEVLV*FIYYDAFLVSFGIS Trigger: TGATATTCCAAAGGATACAAGAAAAGCATCATAATAGATAAAGCAAACTAATACCTCACTGAGCCAGGGGCTGTTGCTTTGATATCTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 90 bp | CTACTAAAATTTCCAACACCAGCAGTGAGAAGTCCTCTTTTGAATTaGAGGTCAAGGTTGTACGGAAGACTTTCTAATTCTATGTTATTA | + |
|
Preference number: 1 (lower is better) Translates to: LLKFPTPAVRSPLLN*RSRLYGRLSNSMLL Trigger: TAATAACATAGAATTAGAAAGTCTTCCGTACAACCTTGACCTCCAATTCAAAAGAGGACTTCTCACTGCTGGTGTTGGAAATTTTAGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR TCA 90 bp | ATATCATTTAGAGTCCTTTCTTCTTCAACTGTGATCAAATATTTATaGGGAACCACTCTGCTTAAGACCACTGGTTACATCATGGAACTT | + |
|
Preference number: 1 (lower is better) Translates to: ISFRVLSSSTVIKYL*GTTLLKTTGYIMEL Trigger: AAGTTCCATGATGTAACCAGTGGTCTTAAGCAGAGTGGTTCCTCATAAATATTTGATCACAGTTGAAGAAGAAAGGACTCTAAATGATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CAA 90 bp | CAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATaGCTCGTGGGATGGCAAGCTTGTACAACCATTCTGGAAATCAGT | + |
|
Preference number: 2 (lower is better) Translates to: QQMLARMWRKRNTPP*LVGWQACTTILEIS Trigger: ACTGATTTCCAGAATGGTTGTACAAGCTTGCCATCCCACGAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CCA 90 bp | AACTTTATAAGCCCCAGTACGGGGGAATGCCAGGGTCAAGAAGTGGGAGTGGGTGACTACATTCCTGTCTaGAGGAAAAATTCAGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: NFISPSTGECQGQEVGVGDYIPV*RKNSVV Trigger: GACCACTGAATTTTTCCTCCAGACAGGAATGTAGTC...ACCCACTCCCACTTCTTGACCCTGGCATTCCCCCGTACTGGGGCTTATAAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CAA 90 bp | GTGGAGAAAGAGGAACACTCCTCCATTGCTCGTGGGATGGCAAGCTaGTACAACCATTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: VEKEEHSSIARGMAS*YNHSGNQSGGSSEN Trigger: ATTTTCTGAGGAACCACCAGACTGATTTCCAGAATGGTTGTACAAGCTTGCCATCCCACGAGCAATGGAGGAGTGTTCCTCTTTCTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTTTATAAGCCCCAGTACGGGGGAATGCCAGGGTCAAGAAGTGGGAGTGGGTACAGGCATGATACAATaGTACAACAGCAGCAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: NFISPSTGECQGQEVGVGTGMIQ*YNSSKQ Trigger: TTGTTTGCTGCTGTTGTATCATTGTATCATGCCTGT...ACCCACTCCCACTTCTTGACCCTGGCATTCCCCCGTACTGGGGCTTATAAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGATCCAGCAATTCCTCTCCTGGACATATACCAAGAAGATGTTCCAACTGGTAAGCAAGCTCTGTGGATaGAACCAGAAGCCTCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: KIQQFLSWTYTKKMFQLVSKLCG*NQKPLH Trigger: ATGCAGAGGCTTCTGGTTTCATCCACAGAGCTTGCT...TACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGATCCAGCAATTCCTCTCCTGGACATATACCAAGAAGATGTTCCAACTGGTAGGCTATGCCAGTGCCTaGCAATTACAGAAGTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: KIQQFLSWTYTKKMFQLVGYASA*QLQKWM Trigger: CATCCACTTCTGTAATTGCCAGGCACTGGCATAGCC...TACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CAA 90 bp | TGGTTATTCCACCCTCACACACAAAAGTGGGAGGTCTTCATCCTATaGATGAAGTCACCATGTACTTCAGACATAGAACCAAGAGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: WLFHPHTQKWEVFIL*MKSPCTSDIEPRGP Trigger: AGGTCCTCTTGGTTCTATGTCTGAAGTACATGGTGACTTCATCAATAGGATGAAGACCTCCCACTTTTGTGTGTGAGGGTGGAATAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR TCA 90 bp | AATACAGGACCCCCAATGAAGGAGCTAGAGAAATTACCCAAGAAGTTGAATGGGACCACTAAGAAATGCTaGGAACTGCTTCCAAACGCT | + |
|
Preference number: 2 (lower is better) Translates to: NTGPPMKELEKLPKKLNGTTKKC*ELLPNA Trigger: AGCGTTTGGAAGCAGTTCTCAGCATTTCTTAGTGGT...CCCATTCAACTTCTTGGGTAATTTCTCTAGCTCCTTCATTGGGGGTCCTGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGATCCAGCAATTCCTCTCCTGGACATATACCAAGAAGATGTTCCAACTGGTATCAGCAAGAGTTTGCTaGAAGGACCCTGCTATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: KIQQFLSWTYTKKMFQLVSARVC*KDPAIA Trigger: AGCTATAGCAGGGTCCTTTCAGCAAACTCTTGCTGA...TACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGATCCAGCAATTCCTCTCCTGGACATATACCAAGAAGATGTTCCAACTGGTATCTCTTGTGAGACTATaGAGGGGCCTAGCAAACACA | + |
|
Preference number: 2 (lower is better) Translates to: KIQQFLSWTYTKKMFQLVSLVRL*RGLANT Trigger: TGTGTTTGCTAGGCCCCTGCATAGTCTCACAAGAGA...TACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGATCCAGCAATTCCTCTCCTGGACATATACCAAGAAGATGTTCCAACTGGTAATATGCCCCAGTACATaGGAACACCAGGGCCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KIQQFLSWTYTKKMFQLVICPST*EHQGQK Trigger: TTTTTGGCCCTGGTGTTCCCATGTACTGGGGCATAT...TACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTTATTCCACCCTCACACACAAAAGTGGGAGGTCTTCATCCTATTGATGAAGGTCTATTCAGGATTTaGGATGGGTTCAGGGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: LVIPPSHTKVGGLHPIDEGLFRI*DGFRDS Trigger: TGAATCCCTGAACCCATCTCAAATCCTGAATAGACC...TTCATCAATAGGATGAAGACCTCCCACTTTTGTGTGTGAGGGTGGAATAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAACATCCCTTTGCAACAGATGGAGACCAGTACGGAAGAGAACTAATCAGAACGGAAATGCTGAGAACTaGAGAGGTCATCTTCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: KTSLCNRWRPVRKRTNQNGNAEN*RGHLLH Trigger: ATGGAGAAGATGACCTCTTCAGTTCTCAGCATTTCC...GTTCTGATTAGTTCTCTTCCGTACTGGTCTCCATCTGTTGCAAAGGGATGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR TCA 90 bp | AATACAGGACCCCCAATGAAGGAGCTAGAGAAATTACCCAAGAAGTTGAATGGGCTAGCAAGAATTTGCTaGAAGGACCCAGATATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: NTGPPMKELEKLPKKLNGLARIC*KDPDIA Trigger: AGCTATATCTGGGTCCTTTCAGCAAATTCTTGCTAG...CCCATTCAACTTCTTGGGTAATTTCTCTAGCTCCTTCATTGGGGGTCCTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTTATTCCACCCTCACACACAAAAGTGGGAGGTCTTCATCCTATTGATGAATTGATTCCCTGGTATTaGCAGCTGACTACATTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LVIPPSHTKVGGLHPIDELIPWY*QLTTFL Trigger: CAGGAATGTAGTCAGCTGCCAATACCAGGGAATCAA...TTCATCAATAGGATGAAGACCTCCCACTTTTGTGTGTGAGGGTGGAATAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTTATTCCACCCTCACACACAAAAGTGGGAGGTCTTCATCCTATTGATGAAATCAATATAATGTTATaGAGGACGAGAGCCCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LVIPPSHTKVGGLHPIDEINIML*RTRALW Trigger: CCAGAGGGCTCTCGTCCTTCATAACATTATATTGAT...TTCATCAATAGGATGAAGACCTCCCACTTTTGTGTGTGAGGGTGGAATAACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGATCCAGCAATTCCTCTCCTGGACATATACCAAGAAGATGTTCCAACTGGTAATAGACATGCTAATGTaGAGGCAGAGAAAGCTCATG | + |
|
Preference number: 2 (lower is better) Translates to: KIQQFLSWTYTKKMFQLVIDMLM*RQRKLM Trigger: CATGAGCTTTCTCTGCCTTCACATTAGCATGTCTAT...TACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGATCCAGCAATTCCTCTCCTGGACATATACCAAGAAGATGTTCCAACTGGTAAGTCCTCTTTTGAATTaGAGGTCAAGGTTGTACGGA | + |
|
Preference number: 2 (lower is better) Translates to: KIQQFLSWTYTKKMFQLVSPLLN*RSRLYG Trigger: TCCGTACAACCTTGACCTCCAATTCAAAAGAGGACT...TACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTTATTCCACCCTCACACACAAAAGTGGGAGGTCTTCATCCTATTGATGAAACAAAAAGGAAATGCTaGGAACTGAAGAGGTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: LVIPPSHTKVGGLHPIDETKRKC*ELKRSS Trigger: AGATGACCTCTTCAGTTCTCAGCATTTCCTTTTTGT...TTCATCAATAGGATGAAGACCTCCCACTTTTGTGTGTGAGGGTGGAATAACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAACATCCCTTTGCAACAGATGGAGACCAGTACGGAAGAGAACTAATCAGAACCACACAAATTTTATATaGCCCAGTACATGGGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: KTSLCNRWRPVRKRTNQNHTNFI*PSTWEH Trigger: GTGTTCCCATGTACTGGGGCATATAAAATTTGTGTG...GTTCTGATTAGTTCTCTTCCGTACTGGTCTCCATCTGTTGCAAAGGGATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CCA 90 bp | AATACAGGACCCCCAATGAAGGAGCTAGAGAAATTACCCAAGAAGTTGAATGGGCAGAACACAGTGTTGTaGAAACCATTTTCAACTGAT | + |
|
Preference number: 2 (lower is better) Translates to: NTGPPMKELEKLPKKLNGQNTVL*KPFSTD Trigger: ATCAGTTGAAAATGGTTTCCACAACACTGTGTTCTG...CCCATTCAACTTCTTGGGTAATTTCTCTAGCTCCTTCATTGGGGGTCCTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGATCCAGCAATTCCTCTCCTGGACATATACCAAGAAGATGTTCCAACTGGTAGTGATCAAATATTTATaGGGAACCACTCTGCTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: KIQQFLSWTYTKKMFQLVVIKYL*GTTLLK Trigger: CTTAAGCAGAGTGGTTCCTCATAAATATTTGATCAC...TACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGATCCAGCAATTCCTCTCCTGGACATATACCAAGAAGATGTTCCAACTGGTAATATGCAAGTGTGAGTaGAAGTGTTCATATAGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KIQQFLSWTYTKKMFQLVICKCE*KCSYSP Trigger: TGGACTATATGAACACTTGCACTCACACTTGCATAT...TACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGTTATTCCACCCTCACACACAAAAGTGGGAGGTCTTCATCCTATTGATGAAGCATCTATAAGTATATaGAAGTGTGAGTGCAAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LVIPPSHTKVGGLHPIDEASISI*KCECKC Trigger: ACACTTGCACTCACACTTGCATATACTTATAGATGC...TTCATCAATAGGATGAAGACCTCCCACTTTTGTGTGTGAGGGTGGAATAACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAACATCCCTTTGCAACAGATGGAGACCAGTACGGAAGAGAACTAATCAGAACGTGTGTGTGTGTGTGTaGATCTATAAGTATATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: KTSLCNRWRPVRKRTNQNVCVCV*IYKYMQ Trigger: TTGCATATACTTATAGATGCACACACACACACACAC...GTTCTGATTAGTTCTCTTCCGTACTGGTCTCCATCTGTTGCAAAGGGATGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGATCCAGCAATTCCTCTCCTGGACATATACCAAGAAGATGTTCCAACTGGTAAAACACAGACACTATTaGACATGTCAGCAAGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: KIQQFLSWTYTKKMFQLVKHRHY*TCQQEF Trigger: AAACTCTTGCTGACATGTGCAATAGTGTCTGTGTTT...TACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTTATTCCACCCTCACACACAAAAGTGGGAGGTCTTCATCCTATTGATGAAGGAGGAAAAATTCAGTaGTCTATTCAGGATTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LVIPPSHTKVGGLHPIDEGGKIQ*SIQDLR Trigger: TCTCAAATCCTGAATAGACCACTGAATTTTTCCTCC...TTCATCAATAGGATGAAGACCTCCCACTTTTGTGTGTGAGGGTGGAATAACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGAAAACATCCCTTTGCAACAGATGGAGACCAGTACGGAAGAGAACTAATCCCACTGGTTACATCATaGAACTTAAATCCAGTGATG | + |
|
Preference number: 2 (lower is better) Translates to: LRKHPFATDGDQYGRELIPLVTS*NLNPVM Trigger: CATCACTGGATTTAAGTTCCATGATGTAACCAGTGG...GATTAGTTCTCTTCCGTACTGGTCTCCATCTGTTGCAAAGGGATGTTTTCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGAAAACATCCCTTTGCAACAGATGGAGACCAGTACGGAAGAGAACTAATCAAGATTTCCTCAAGATaGTGTCTCCTAGAAATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LRKHPFATDGDQYGRELIKISSR*CLLEIS Trigger: TGAAATTTCTAGGAGACACCATCTTGAGGAAATCTT...GATTAGTTCTCTTCCGTACTGGTCTCCATCTGTTGCAAAGGGATGTTTTCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CAA 90 bp | ATAAGTATATGCAAGTGTGAGTGCAAGTGTTCATATAGTCCAGAGTaGTCAGATCTCCTAAAAATGGAGTTACATTTGATTATGAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: ISICKCECKCSYSPE*SDLLKMELHLIMSH Trigger: GTGGCTCATAATCAAATGTAACTCCATTTTTAGGAGATCTGACAACTCTGGACTATATGAACACTTGCACTCACACTTGCATATACTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR GCA 72 bp | TGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTaGTCGTGGGATGGCAAGCTTGTACAACCATTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WRGCGERGTLLH*SWDGKLVQPFW Trigger: CCAGAATGGTTGTACAAGCTTGCCATCCCACGAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTATAAGCCCCAGTACGGGGGAATGCCAGGGTCAAGAAGTGGGAGTGGGTAATCAGAACACAGTGTaGTGGAAACCATTTTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: NFISPSTGECQGQEVGVGNQNTV*WKPFST Trigger: AGTTGAAAATGGTTTCCACAACACTGTGTTCTGATT...ACCCACTCCCACTTCTTGACCCTGGCATTCCCCCGTACTGGGGCTTATAAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | GGAGCTCTTGACTCTAGCTACATATGTATCAAAAGATaGCCTAGTTGGCCATCACTGGAAAGAGAGGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GALDSSYICIKR*PSWPSLEREAH Trigger: ATGGGCCTCTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGTAGCTAGAGTCAAGAGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR TCA 72 bp | ACGCTGACACCACTGCATACACTAGCAAGAATTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: TLTPLHTLARIC*KDPDIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAATTCTTGCTAGTGTATGCAGTGGTGTCAGCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGATGGCCCGCAACAGAGGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: MFIAALFIIARS*KEPRWPATEEW Trigger: CCATTCCTCTGTTGCGGGCCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CAA 90 bp | AATACAGGACCCCCAATGAAGGAGCTAGAGAAATTACCCAAGAAGTTGAATGGGAAGTCCTCTTTTGAATaGGAGGTCAAGGTTGTACGG | + |
|
Preference number: 3 (lower is better) Translates to: NTGPPMKELEKLPKKLNGKSSFE*EVKVVR Trigger: CCGTACAACCTTGACCTCCAATTCAAAAGAGGACTT...CCCATTCAACTTCTTGGGTAATTTCTCTAGCTCCTTCATTGGGGGTCCTGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR TCA 72 bp | GATGAAACCAGAAGCCTCTGCATCAATATAATGTTATaGAGGACGAGAGCCCTCTGGCCTTCAGAAAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: DETRSLCINIML*RTRALWPSESI Trigger: TATGCTTTCTGAAGGCCAGAGGGCTCTCGTCCTTCATAACATTATATTGATGCAGAGGCTTCTGGTTTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | CAGCTGACTACATTCCTGTCTGGAGGAAAAATTCAGTaGTCTATTCAGGATTTGAGATGGGTTCAGGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: QLTTFLSGGKIQ*SIQDLRWVQGF Trigger: GAATCCCTGAACCCATCTCAAATCCTGAATAGACCACTGAATTTTTCCTCCAGACAGGAATGTAGTCAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | GATTCCCTGGTATTGGCAGCTGACTACATTCCTGTCTaGAGGAAAAATTCAGTGGTCTATTCAGGATTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: DSLVLAADYIPV*RKNSVVYSGFE Trigger: CTCAAATCCTGAATAGACCACTGAATTTTTCCTCCAGACAGGAATGTAGTCAGCTGCCAATACCAGGGAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | GAGGAACCACTCTGCTTAAGACCACTGGTTACATCATaGAACTTAAATCCAGTGATGGTAGACAGGCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: EEPLCLRPLVTS*NLNPVMVDRHD Trigger: ATCATGCCTGTCTACCATCACTGGATTTAAGTTCCATGATGTAACCAGTGGTCTTAAGCAGAGTGGTTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CAA 90 bp | AATACAGGACCCCCAATGAAGGAGCTAGAGAAATTACCCAAGAAGTTGAATGGGGAGGTCTTCATCCTATaGATGAAGTCACCATGTACT | + |
|
Preference number: 3 (lower is better) Translates to: NTGPPMKELEKLPKKLNGEVFIL*MKSPCT Trigger: AGTACATGGTGACTTCATCAATAGGATGAAGACCTC...CCCATTCAACTTCTTGGGTAATTTCTCTAGCTCCTTCATTGGGGGTCCTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | GCATATGTAGCAGAAGAAGGCCTAGTCAGCCATCATTaGGAAGAGAGGCTTCTTAGTCTTGCAAACTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: AYVAEEGLVSHH*EERLLSLANFI Trigger: TATAAAGTTTGCAAGACTAAGAAGCCTCTCTTCCCAATGATGGCTGACTAGGCCTTCTTCTGCTACATATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGAAAACATCCCTTTGCAACAGATGGAGACCAGTACGGAAGAGAACTAATCATTGATTCCCTGGTATaGGCAGCTGACTACATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRKHPFATDGDQYGRELIIDSLV*AADYIP Trigger: AGGAATGTAGTCAGCTGCCAATACCAGGGAATCAAT...GATTAGTTCTCTTCCGTACTGGTCTCCATCTGTTGCAAAGGGATGTTTTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGAAAACATCCCTTTGCAACAGATGGAGACCAGTACGGAAGAGAACTAATCGAAGGCACATACCAATaGGTCAGCCAACAACTGATT | + |
|
Preference number: 3 (lower is better) Translates to: LRKHPFATDGDQYGRELIEGTYQ*VSQQLI Trigger: AATCAGTTGTTGGCTGACCAATTGGTATGTGCCTTC...GATTAGTTCTCTTCCGTACTGGTCTCCATCTGTTGCAAAGGGATGTTTTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR TCA 72 bp | TGTCTGGAGGAAAAATTCAGTGGTCTATTCAGGATTTaGGATGGGTTCAGGGATTCAGTTGAAGAGTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: CLEEKFSGLFRI*DGFRDSVEESI Trigger: GATTGACTCTTCAACTGAATCCCTGAACCCATCTCAAATCCTGAATAGACCACTGAATTTTTCCTCCAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR GCA 72 bp | AGGGAAATCATGCCTTGTACTAGTAACCTAGAAAACTaGCCAGAGTTTGCAAAGTTATGGATCTTGGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: REIMPCTSNLEN*PEFAKLWILGN Trigger: ATTCCCCAAGATCCATAACTTTGCAAACTCTGGGCAGTTTTCTAGGTTACTAGTACAAGGCATGATTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | ACATATGTATCAAAAGATGGCCTAGTTGGCCATCACTaGAAAGAGAGGCCCATCGGACACACAAATTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: TYVSKDGLVGHH*KERPIGHTNFI Trigger: TATAAAATTTGTGTGTCCGATGGGCCTCTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | TTTCCAACACCAGCAGTGAGAAGTCCTCTTTTGAATTaGAGGTCAAGGTTGTACGGAAGACTTTCTAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: FPTPAVRSPLLN*RSRLYGRLSNS Trigger: AGAATTAGAAAGTCTTCCGTACAACCTTGACCTCCAATTCAAAAGAGGACTTCTCACTGCTGGTGTTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | TGGCAATTACAGAAGTGGATGTTCACAGTCATCTATTaGATAAAATACAGGACCCCCAATGAAGGAGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: WQLQKWMFTVIY*IKYRTPNEGAR Trigger: TCTAGCTCCTTCATTGGGGGTCCTGTATTTTATCCAATAGATGACTGTGAACATCCACTTCTGTAATTGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | TTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATaGCCCGCAACAGAGGAATGGATACAGAAAATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LFIIARSWKEPR*PATEEWIQKML Trigger: CAACATTTTCTGTATCCATTCCTCTGTTGCGGGCCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | GGCAAGCTTGTACAACCATTCTGGAAATCAGTCTGGTaGTTCCTCAGAAAATTAGAAAAAGTACTACCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GKLVQPFWKSVW*FLRKLEKVLPE Trigger: TTCTGGTAGTACTTTTTCTAATTTTCTGAGGAACCACCAGACTGATTTCCAGAATGGTTGTACAAGCTTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR TCA 72 bp | ATCATGGAACTTAAATCCAGTGATGGTAGACAGGCATaGTACAATGATACAACAGCAGCAAACAACAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: IMELKSSDGRQA*YNDTTAANNNN Trigger: GTTGTTGTTGTTTGCTGCTGTTGTATCATTGTATCATGCCTGTCTACCATCACTGGATTTAAGTTCCATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR TCA 72 bp | AGAGTCCTTTCTTCTTCAACTGTGATCAAATATTTATaGGGAACCACTCTGCTTAAGACCACTGGTTACATC | + |
|
Preference number: 3 (lower is better) Translates to: RVLSSSTVIKYL*GTTLLKTTGYI Trigger: GATGTAACCAGTGGTCTTAAGCAGAGTGGTTCCTCATAAATATTTGATCACAGTTGAAGAAGAAAGGACTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CCA 72 bp | AAAAAGTACTACCAGAAGATCCAGCAATTCCTCTCCTaGACATATACCAAGAAGATGTTCCAACTGGTAATA | + |
|
Preference number: 3 (lower is better) Translates to: KKYYQKIQQFLS*TYTKKMFQLVI Trigger: TATTACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTTCTGGTAGTACTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CAA 72 bp | GAGGAACACTCCTCCATTGCTCGTGGGATGGCAAGCTaGTACAACCATTCTGGAAATCAGTCTGGTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEHSSIARGMAS*YNHSGNQSGGS Trigger: GGAACCACCAGACTGATTTCCAGAATGGTTGTACAAGCTTGCCATCCCACGAGCAATGGAGGAGTGTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS-3UTR GCA 90 bp | AACTTTATAAGCCCCAGTACGGGGGAATGCCAGGGTCAAGAAGTGGGAGTGGGTAGAAAATCTGACACATaGACCCTCCAAAAGAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: NFISPSTGECQGQEVGVGRKSDT*TLQKRS Trigger: CGATCTCTTTTGGAGGGTGCATGTGTCAGATTTTCT...ACCCACTCCCACTTCTTGACCCTGGCATTCCCCCGTACTGGGGCTTATAAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS-3UTR TCA 90 bp | AATACAGGACCCCCAATGAAGGAGCTAGAGAAATTACCCAAGAAGTTGAATGGGCTGGCCACAGGTAGATaGAGATGCAGGGCCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTGPPMKELEKLPKKLNGLATGR*RCRAQK Trigger: TTTTTGGGCCCTGCATCTTCATCTACCTGTGGCCAG...CCCATTCAACTTCTTGGGTAATTTCTCTAGCTCCTTCATTGGGGGTCCTGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CAA 72 bp | AGAAATTACCCATGGAAGGAGTTACAGAGACAAAGTTaGGAGCTAAGGGGAAGGGATGGACCATCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RNYPWKELQRQS*ELRGRDGPSRD Trigger: GTCTCTGGATGGTCCATCCCTTCCCCTTAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTAATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS-3UTR CCA 90 bp | AATACAGGACCCCCAATGAAGGAGCTAGAGAAATTACCCAAGAAGTTGAATGGGCCAGGTTATGCTGACTaGCCACAGGTAGATGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NTGPPMKELEKLPKKLNGPGYAD*PQVDED Trigger: ATCTTCATCTACCTGTGGCCAGTCAGCATAACCTGG...CCCATTCAACTTCTTGGGTAATTTCTCTAGCTCCTTCATTGGGGGTCCTGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS-3UTR TCA 90 bp | AATACAGGACCCCCAATGAAGGAGCTAGAGAAATTACCCAAGAAGTTGAATGGGAAAGACAGAAGTCAATaGACGAGAGGTTGGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: NTGPPMKELEKLPKKLNGKDRSQ*TRGWPT Trigger: TGTTGGCCAACCTCTCGTTCATTGACTTCTGTCTTT...CCCATTCAACTTCTTGGGTAATTTCTCTAGCTCCTTCATTGGGGGTCCTGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTTATTCCACCCTCACACACAAAAGTGGGAGGTCTTCATCCTATTGATGAAACCACCACTGTGATGTaGGCAGTACAAGTAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVIPPSHTKVGGLHPIDETTTVM*AVQVER Trigger: TCTCTCTACTTGTACTGCCCACATCACAGTGGTGGT...TTCATCAATAGGATGAAGACCTCCCACTTTTGTGTGTGAGGGTGGAATAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS-3UTR TCA 90 bp | TTAACACTTAAGATGCAAGGAGACTTCAGCACCAAAAGAGACCATTTCAAAAATGCCCCATCCTTAGAGTaGAGGCAGACAGTAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLKMQGDFSTKRDHFKNAPSLE*RQTVVR Trigger: CCTGACTACTGTCTGCCTTCACTCTAAGGATGGGGC...ATTTTTGAAATGGTCTCTTTTGGTGCTGAAGTCTCCTTGCATCTTAAGTGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS-3UTR CCA 90 bp | AAGATCCAGCAATTCCTCTCCTGGACATATACCAAGAAGATGTTCCAACTGGTAGTTGGAGTAATGGAGTaGCTTACAGATAGCTACATA | + |
|
Preference number: 4 (lower is better) Translates to: KIQQFLSWTYTKKMFQLVVGVME*LTDSYI Trigger: TATGTAGCTATCTGTAAGCCACTCCATTACTCCAAC...TACCAGTTGGAACATCTTCTTGGTATATGTCCAGGAGAGGAATTGCTGGATCTT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS-3UTR TCA 90 bp | TTAAGAAAACATCCCTTTGCAACAGATGGAGACCAGTACGGAAGAGAACTAATCCTTAGGTGTAGTTACTaGGGAAAGACAGAAGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRKHPFATDGDQYGRELILRCSY*GKTEVN Trigger: ATTGACTTCTGTCTTTCCTCAGTAACTACACCTAAG...GATTAGTTCTCTTCCGTACTGGTCTCCATCTGTTGCAAAGGGATGTTTTCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS-3UTR GCA 90 bp | AAAACATCCCTTTGCAACAGATGGAGACCAGTACGGAAGAGAACTAATCAGAACAGTTGGCTTATTGAATaGACAAAGCCAATCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTSLCNRWRPVRKRTNQNSWLIE*TKPIIH Trigger: ATGGATGATTGGCTTTGTGCATTCAATAAGCCAACT...GTTCTGATTAGTTCTCTTCCGTACTGGTCTCCATCTGTTGCAAAGGGATGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CAA 72 bp | GTACAATTGGTTGAGAATATAATTGATTCCCTGGTATaGGCAGCTGACTACATTCCTGTCTGGAGGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VQLVENIIDSLV*AADYIPVWRKN Trigger: ATTTTTCCTCCAGACAGGAATGTAGTCAGCTGCCAATACCAGGGAATCAATTATATTCTCAACCAATTGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CAA 72 bp | TGCAAGTGTGAGTGCAAGTGTTCATATAGTCCAGAGTaGTCAGATCTCCTAAAAATGGAGTTACATTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: CKCECKCSYSPE*SDLLKMELHLI Trigger: AATCAAATGTAACTCCATTTTTAGGAGATCTGACAACTCTGGACTATATGAACACTTGCACTCACACTTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CAA 72 bp | AGACCAGTACGGAAGAGAACTAATCAGAACACAGTGTaGTGGAAACCATTTTCAACTGATATATCAGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: RPVRKRTNQNTV*WKPFSTDISVL Trigger: TAGTACTGATATATCAGTTGAAAATGGTTTCCACAACACTGTGTTCTGATTAGTTCTCTTCCGTACTGGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS-3UTR TCA 90 bp | TTAACACTTAAGATGCAAGGAGACTTCAGCACCAAAAGAGACCATTTCAAAAATAACCAGTTGGCTTATTaGATGCACAAAGCCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTLKMQGDFSTKRDHFKNNQLAY*MHKANH Trigger: ATGATTGGCTTTGTGCATTCAATAAGCCAACTGGTT...ATTTTTGAAATGGTCTCTTTTGGTGCTGAAGTCTCCTTGCATCTTAAGTGTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| 3UTR CAA 72 bp | TACTCAGCTACTAAAAACAATGAATTTATGAAATTCTaGGGCAAATGGGTGTATCTGGAGGATATCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSATKNNEFMKF*GKWVYLEDIIL Trigger: AAGGATGATATCCTCCAGATACACCCATTTGCCCAAGAATTTCATAAATTCATTGTTTTTAGTAGCTGAGTA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS-3UTR CAA 90 bp | AACTTTATAAGCCCCAGTACGGGGGAATGCCAGGGTCAAGAAGTGGGAGTGGGTAACACAGCAAGAAACTaGTCCACCCAGGTTATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NFISPSTGECQGQEVGVGNTARN*STQVML Trigger: CAGCATAACCTGGGTGGACAAGTTTCTTGCTGTGTT...ACCCACTCCCACTTCTTGACCCTGGCATTCCCCCGTACTGGGGCTTATAAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS GCA 90 bp | CCACAGAAGGGCAGATTTACAATTATAACCAGTTGGCTTATTGAATaGACAAAGCCAATCATCCATGACGCCATCACTAATCCAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PQKGRFTIITSWLIE*TKPIIHDAITNPMH Trigger: GTGCATTGGATTAGTGATGGCGTCATGGATGATTGGCTTTGTGCATTCAATAAGCCAACTGGTTATAATTGTAAATCTGCCCTTCTGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099619.6 ENSMUST00000214760.2 |
||
| CDS-3UTR CAA 90 bp | TTAACACTTAAGATGCAAGGAGACTTCAGCACCAAAAGAGACCATTTCAAAAATTCCAAGCAGGCTAGCTaGATTACCAATGGAATATCG | + |
|
Preference number: 5 (lower is better) Translates to: LTLKMQGDFSTKRDHFKNSKQAS*ITNGIS Trigger: CGATATTCCATTGGTAATCAAGCTAGCCTGCTTGGA...ATTTTTGAAATGGTCTCTTTTGGTGCTGAAGTCTCCTTGCATCTTAAGTGTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214760.2 |
||
| CDS CCA 72 bp | TATGGAAATAGGACACCAGCAACAGAACAAAGCATATaGCTGCTAGCACACCACTGTCAGCATTTATCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: YGNRTPATEQSI*LLAHHCQHLSK Trigger: TTTTGATAAATGCTGACAGTGGTGTGCTAGCAGCCATATGCTTTGTTCTGTTGCTGGTGTCCTATTTCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099619.6 ENSMUST00000214760.2 |
||
| CDS GCA 72 bp | GGCAGATTTACAATTATAACCAGTTGGCTTATTGAATaGACAAAGCCAATCATCCATGACGCCATCACTAAT | + |
|
Preference number: 6 (lower is better) Translates to: GRFTIITSWLIE*TKPIIHDAITN Trigger: ATTAGTGATGGCGTCATGGATGATTGGCTTTGTGCATTCAATAAGCCAACTGGTTATAATTGTAAATCTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099619.6 ENSMUST00000214760.2 |
||