Pregenerated sensors for OLFR1276 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063844Ensembl transcript IDs: ENSMUST00000073322.2, ENSMUST00000218065.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAATCCACCCACATCTACTGCCTGGCCCTGACATTCCCCTACACTaGGGCATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTG | + |
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Preference number: 1 (lower is better) Translates to: PIHPHLLPGPDIPLH*GIEPSQDQGPLLPL Trigger: CAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATGCCCCAGTGTAGGGGAATGTCAGGGCCAGGCAGTAGATGTGGGTGGATTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR TCA 90 bp | TATTCCGCCTGCATTAAGCTCTCTGCCGACACAGAAATGAACAACTaGAAATACAGGAACACACCTTCATACAATGTGGGGGCAGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: YSACIKLSADTEMNN*KYRNTPSYNVGAGH Trigger: ATGGCCTGCCCCCACATTGTATGAAGGTGTGTTCCTGTATTTTCAGTTGTTCATTTCTGTGTCGGCAGAGAGCTTAATGCAGGCGGAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 90 bp | ATCCTTTCTATAGCTCCTTCATTGGGGACCCTGTGCTCAGTCCAATaGATGGGTGCAAGAATTTACCTCTATATTTGTCAGTCACTGGTG | + |
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Preference number: 1 (lower is better) Translates to: ILSIAPSLGTLCSVQ*MGARIYLYICQSLV Trigger: CACCAGTGACTGACAAATATAGAGGTAAATTCTTGCACCCATCCATTGGACTGAGCACAGGGTCCCCAATGAAGGAGCTATAGAAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR TCA 90 bp | ATACCAAATATTCCGCCTGCATTAAGCTCTCTGCCGACACAGAAATaGACAACTGAAAATACAGGAACACACCTTCATACAATGTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: IPNIPPALSSLPTQK*TTENTGTHLHTMWG Trigger: CCCCCACATTGTATGAAGGTGTGTTCCTGTATTTTCAGTTGTTCATTTCTGTGTCGGCAGAGAGCTTAATGCAGGCGGAATATTTGGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR TCA 90 bp | GCACAGCTGCAAGTTCTTGATTTCCCCAAAAGCCACATTTACATCTaGATCAACAAGTACCAGGACAGGGTTAGATACATTTCTTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: AQLQVLDFPKSHIYI*INKYQDRVRYISLG Trigger: ACCCAAAGAAATGTATCTAACCCTGTCCTGGTACTTGTTGATTCAGATGTAAATGTGGCTTTTGGGGAAATCAAGAACTTGCAGCTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR TCA 90 bp | ATTCTACCATGGAAGGAGGCTCTTCTTAAAATGGTCACTGCTTCCTaGGGATTTATAGTATGGCAAGAGCAGATAAGGAAAGGAGAGACA | + |
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Preference number: 1 (lower is better) Translates to: ILPWKEALLKMVTAS*GFIVWQEQIRKGET Trigger: TGTCTCTCCTTTCCTTATCTGCTCTTGCCATACTATAAATCCTCAGGAAGCAGTGACCATTTTAAGAAGAGCCTCCTTCCATGGTAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 90 bp | AATGGATGGGTGCAAGAATTTACCTCTATATTTGTCAGTCACTGGTaGAAGATTCAATTCACAAACCGCATGAAACTCAAGATGAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: NGWVQEFTSIFVSHW*KIQFTNRMKLKMKG Trigger: TCCCTTCATCTTGAGTTTCATGCGGTTTGTGAATTGAATCTTCCACCAGTGACTGACAAATATAGAGGTAAATTCTTGCACCCATCCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 90 bp | TCCAATGGATGGGTGCAAGAATTTACCTCTATATTTGTCAGTCACTaGTGGAAGATTCAATTCACAAACCGCATGAAACTCAAGATGAAG | + |
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Preference number: 1 (lower is better) Translates to: SNGWVQEFTSIFVSH*WKIQFTNRMKLKMK Trigger: CTTCATCTTGAGTTTCATGCGGTTTGTGAATTGAATCTTCCACCAGTGACTGACAAATATAGAGGTAAATTCTTGCACCCATCCATTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 90 bp | TTGGCTAAATGCTCTTACTCCTGTAAACAACCTAATAAAATGCATTaGGTCACAAGAGAAGTCATGGATGCAGAAATGATGCTTGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: LAKCSYSCKQPNKMH*VTREVMDAEMMLVG Trigger: ACCAACAAGCATCATTTCTGCATCCATGACTTCTCTTGTGACCCAATGCATTTTATTAGGTTGTTTACAGGAGTAAGAGCATTTAGCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR TCA 90 bp | CTTACAATAGTGACAAGTCTGTCATGGGAGAAACCAGTCACTTTCTaGCTGCTTATATGCTTGATAGGTAAGTCAGAATTCATGTTCATT | + |
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Preference number: 1 (lower is better) Translates to: LTIVTSLSWEKPVTF*LLICLIGKSEFMFI Trigger: AATGAACATGAATTCTGACTTACCTATCAAGCATATAAGCAGTCAGAAAGTGACTGGTTTCTCCCATGACAGACTTGTCACTATTGTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCACCAATCCACCCACATCTACTGCCTGGCCCTGACATTCCCCTACACTGGGCAGTTTCAGAGGAACTaGTACCCACTCTGGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: PHQSTHIYCLALTFPYTGQFQRN*YPLWHP Trigger: TGGATGCCAGAGTGGGTATCAGTTCCTCTGAAACTG...CCCAGTGTAGGGGAATGTCAGGGCCAGGCAGTAGATGTGGGTGGATTGGTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR TCA 90 bp | TACATATGCAGCTGGAGCCATGAGTCCCACCTTGTGTACTCTTTGGTGGGTGATAGAGACTGCCCTACCTaGGGATCTATCCCATATACA | + |
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Preference number: 2 (lower is better) Translates to: YICSWSHESHLVYSLVGDRDCPT*GSIPYT Trigger: TGTATATGGGATAGATCCTCAGGTAGGGCAGTCTCT...ATCACCCACCAAAGAGTACACAAGGTGGGACTCATGGCTCCAGCTGCATATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCAGCTCCTTAGATCCTTTCTATAGCTCCTTCATTGGGGACCCTGTGCTCGTGGAAACCAACAAGTaGTTACTGACAGAAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PFSSLDPFYSSFIGDPVLVETNK*LLTEAC Trigger: ACAGGCTTCTGTCAGTAAGCACTTGTTGGTTTCCAC...GAGCACAGGGTCCCCAATGAAGGAGCTATAGAAAGGATCTAAGGAGCTGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR TCA 90 bp | TACATATGCAGCTGGAGCCATGAGTCCCACCTTGTGTACTCTTTGGTGGGTGATCTGCCGACACAGAAATaGACAACTGAAAATACAGGA | + |
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Preference number: 2 (lower is better) Translates to: YICSWSHESHLVYSLVGDLPTQK*TTENTG Trigger: TCCTGTATTTTCAGTTGTTCATTTCTGTGTCGGCAG...ATCACCCACCAAAGAGTACACAAGGTGGGACTCATGGCTCCAGCTGCATATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTATACATGCAGCTGGAGCCATaGGTCCCACCTTGTGTACTC | + |
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Preference number: 2 (lower is better) Translates to: GRSEDRERANQTTLKSLYMQLEP*VPPCVL Trigger: GAGTACACAAGGTGGGACTCATGGCTCCAGCTGCAT...GTATAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCAGCTCCTTAGATCCTTTCTATAGCTCCTTCATTGGGGACCCTGTGCTCTACCAGACACTTTTGTaGAAACCAACAAGTGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: PFSSLDPFYSSFIGDPVLYQTLL*KPTSAY Trigger: GTAAGCACTTGTTGGTTTCCACAAAAGTGTCTGGTA...GAGCACAGGGTCCCCAATGAAGGAGCTATAGAAAGGATCTAAGGAGCTGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCAGCTCCTTAGATCCTTTCTATAGCTCCTTCATTGGGGACCCTGTGCTCACAGAAATGAACAACTaGAAATACAGGAACACACCT | + |
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Preference number: 2 (lower is better) Translates to: PFSSLDPFYSSFIGDPVLTEMNN*KYRNTP Trigger: AGGTGTGTTCCTGTATTTTCAGTTGTTCATTTCTGT...GAGCACAGGGTCCCCAATGAAGGAGCTATAGAAAGGATCTAAGGAGCTGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCAGAGACTGCCCTACCTGAGGATCTATCCCATATACAATCACCAAATACCTCATGGATGCAGAAATaGTGCTTGTTGGTAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: HPETALPEDLSHIQSPNTSWMQK*CLLVRC Trigger: GCATCTTACCAACAAGCATCATTTCTGCATCCATGA...GGTATTTGGTGATTGTATATGGGATAGATCCTCAGGTAGGGCAGTCTCTGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR TCA 90 bp | TACATATGCAGCTGGAGCCATGAGTCCCACCTTGTGTACTCTTTGGTGGGTGATAAACCAGTCACTTTCTaGCTGCTTATATGCTTGATA | + |
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Preference number: 2 (lower is better) Translates to: YICSWSHESHLVYSLVGDKPVTF*LLICLI Trigger: TATCAAGCATATAAGCAGTCAGAAAGTGACTGGTTT...ATCACCCACCAAAGAGTACACAAGGTGGGACTCATGGCTCCAGCTGCATATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTATACCAGAGACTTAAGGAATaGCCATCCAGAGACTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GRSEDRERANQTTLKSLYQRLKE*PSRDCP Trigger: AGGGCAGTCTCTGGATGGTCATTCCTTAAGTCTCTG...GTATAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR GCA 90 bp | CCAATGGATGGGTGCAAGAATTTACCTCTATATTTGTCAGTCACTGGTGGAAGAGGCATCCACAGTCACTaGATGTATGCAATGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: PMDGCKNLPLYLSVTGGRGIHSH*MYAMNG Trigger: CCCATTCATTGCATACATGCAGTGACTGTGGATGCC...TCTTCCACCAGTGACTGACAAATATAGAGGTAAATTCTTGCACCCATCCATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR GCA 90 bp | CATCCAGAGACTGCCCTACCTGAGGATCTATCCCATATACAATCACCAAATACCTGCTCTGTCTTCTCTTaGCTGGTTGATTCGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: HPETALPEDLSHIQSPNTCSVFS*LVDSIF Trigger: AAAGATCGAATCAACCAGGCAAGAGAAGACAGAGCA...GGTATTTGGTGATTGTATATGGGATAGATCCTCAGGTAGGGCAGTCTCTGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR GCA 90 bp | CATCCAGAGACTGCCCTACCTGAGGATCTATCCCATATACAATCACCAAATACCATCTCTTTACCTCCCTaGTTTATTCACACCCATGCT | + |
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Preference number: 2 (lower is better) Translates to: HPETALPEDLSHIQSPNTISLPP*FIHTHA Trigger: AGCATGGGTGTGAATAAAGCAGGGAGGTAAAGAGAT...GGTATTTGGTGATTGTATATGGGATAGATCCTCAGGTAGGGCAGTCTCTGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTATCATTGGGGACCCTGTaGTCAGTCCAATGGATGGGT | + |
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Preference number: 2 (lower is better) Translates to: IGRSEDRERANQTTLKSLSLGTL*SVQWMG Trigger: ACCCATCCATTGGACTGAGCACAGGGTCCCCAATGA...TAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CCA 90 bp | TACATATGCAGCTGGAGCCATGAGTCCCACCTTGTGTACTCTTTGGTGGGTGATTTAGATACATTTCTTTaGGTTTCCCTTTGGCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: YICSWSHESHLVYSLVGDLDTFL*VSLWPV Trigger: TACAGGCCAAAGGGAAACCCAAAGAAATGTATCTAA...ATCACCCACCAAAGAGTACACAAGGTGGGACTCATGGCTCCAGCTGCATATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTATCCTACATATGCAGCTaGAGCCATGAGTCCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: IGRSEDRERANQTTLKSLSYICS*SHESHL Trigger: AAGGTGGGACTCATGGCTCCAGCTGCATATGTAGGA...TAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTATACCTTTATTCACACCCATaGTCTGTCTTCTCTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GRSEDRERANQTTLKSLYLYSHP*SVFSCL Trigger: CAGGCAAGAGAAGACAGAGCATGGGTGTGAATAAAG...GTATAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTATACGTGACAAGTCTGTCATaGGAGAAACCAGTCACTTTC | + |
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Preference number: 2 (lower is better) Translates to: GRSEDRERANQTTLKSLYVTSLS*EKPVTF Trigger: GAAAGTGACTGGTTTCTCCCATGACAGACTTGTCAC...GTATAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR GCA 90 bp | ATATCAGGGAAGATATTCTTTGCAATGAACAATGGTGAAGCGCAGATGCATAGCCAGTCACTGCATGTATaGAATGAATGGGGTATGCAA | + |
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Preference number: 2 (lower is better) Translates to: ISGKIFFAMNNGEAQMHSQSLHV*NEWGMQ Trigger: TTGCATACCCCATTCATTGCATACATGCAGTGACTG...GCTATGCATCTGCGCTTCACCATTGTTCATTGCAAAGAATATCTTCCCTGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCACTGTACCTAGACAGCAAAAATTGCTAAAGACACCACATACCTCTAAGCAGAGGTATAGCCATTaGCTAAATGCTCTTACTCCT | + |
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Preference number: 2 (lower is better) Translates to: FATVPRQQKLLKTPHTSKQRYSH*LNALTP Trigger: AGGAGTAAGAGCATTTAGCCAATGGCTATACCTCTG...CTTAGAGGTATGTGGTGTCTTTAGCAATTTTTGCTGTCTAGGTACAGTGGCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CAA 90 bp | GCATTGGAAATCACAACAGCTATGACTATTTTCATAAGTTCTCCATaGGATAGGGCCTATAAGTATTCTACCATGGAAGGAGGCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: ALEITTAMTIFISSP*DRAYKYSTMEGGSS Trigger: AGAAGAGCCTCCTTCCATGGTAGAATACTTATAGGCCCTATCCAATGGAGAACTTATGAAAATAGTCATAGCTGTTGTGATTTCCAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTAATGGTCACTGCTTCCTaGGGATTTATAGTATGGCAA | + |
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Preference number: 2 (lower is better) Translates to: IGRSEDRERANQTTLKSLMVTAS*GFIVWQ Trigger: TTGCCATACTATAAATCCTCAGGAAGCAGTGACCAT...TAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR GCA 90 bp | CAATCACCAAATACCAGACACTTTTGTGGAAACCAACAAGTGCTTACTGACAGAAAGAGAAGTCATGGATaGAGAAATGATGCTTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: QSPNTRHFCGNQQVLTDRKRSHG*RNDACW Trigger: CCAACAAGCATCATTTCTGCATCCATGACTTCTCTT...TCTGTCAGTAAGCACTTGTTGGTTTCCACAAAAGTGTCTGGTATTTGGTGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCAATGGATGGGTGCAAGAATTTACCTCTATATTTGTCAGTCACTGGTGGAATGCTTGTTGGTAAGATaGATGAGATTAGATGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: VQWMGARIYLYICQSLVECLLVR*MRLDGK Trigger: TTTACCATCTAATCTCATGCATCTTACCAACAAGCA...TTCCACCAGTGACTGACAAATATAGAGGTAAATTCTTGCACCCATCCATTGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTATACAGTCCAATGGATGGGTaGAAGAATTTACCTCTATAT | + |
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Preference number: 2 (lower is better) Translates to: GRSEDRERANQTTLKSLYSPMDG*KNLPLY Trigger: ATATAGAGGTAAATTCTTGCACCCATCCATTGGACT...GTATAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTATACAGAGAGATAACTCAGTaGTTAAGAGCAGTTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: GRSEDRERANQTTLKSLYREITQ*LRAVVL Trigger: AAGAACAACTGCTCTTAACCACTGAGTTATCTCTCT...GTATAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CCA 90 bp | CAATCACCAAATACCAGACACTTTTGTGGAAACCAACAAGTGCTTACTGACAGAATAAGTATTCTACCATaGAAGGAGGCTCTTCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: QSPNTRHFCGNQQVLTDRISILP*KEALLK Trigger: TTTAAGAAGAGCCTCCTTCCATGGTAGAATACTTAT...TCTGTCAGTAAGCACTTGTTGGTTTCCACAAAAGTGTCTGGTATTTGGTGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CAA 90 bp | AATGTAAAGGTAATGTTGACTTCTGAGTGTGACAGGACTGTTGCATaGGAAATCACAACAGCTATGACTATTTTCATAAGTTCTCCATTG | + |
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Preference number: 2 (lower is better) Translates to: NVKVMLTSECDRTVA*EITTAMTIFISSPL Trigger: CAATGGAGAACTTATGAAAATAGTCATAGCTGTTGTGATTTCCAATGCAACAGTCCTGTCACACTCAGAAGTCAACATTACCTTTACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTAGGCTTTTGTGTATTCTaGTGGAGGTTTACTAATAAA | + |
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Preference number: 2 (lower is better) Translates to: IGRSEDRERANQTTLKSLGFCVF*WRFTNK Trigger: TTTATTAGTAAACCTCCAGCAGAATACACAAAAGCC...TAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CAA 90 bp | AATTGCCATTATAGTTGGTTTGCCACTGTACCTAGACAGCAAAAATaGCTAAAGACACCACATACCTCTAAGTACATACAGAAATTAATC | + |
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Preference number: 2 (lower is better) Translates to: NCHYSWFATVPRQQK*LKTPHTSKYIQKLI Trigger: GATTAATTTCTGTATGTACTTAGAGGTATGTGGTGTCTTTAGCAATTTTTGCTGTCTAGGTACAGTGGCAAACCAACTATAATGGCAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 72 bp | CCACATCTACTGCCTGGCCCTGACATTCCCCTACACTaGGGCATAGAGCCTTCACAGGACCAAGGGCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: PHLLPGPDIPLH*GIEPSQDQGPL Trigger: GAGAGGCCCTTGGTCCTGTGAAGGCTCTATGCCCCAGTGTAGGGGAATGTCAGGGCCAGGCAGTAGATGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR GCA 72 bp | GCACGCCCACCTTATGTCTGTATCTCTTTACCTCCCTaGTTTATTCACACCCATGCTCTGTCTTCTCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: ARPPYVCISLPP*FIHTHALSSLA Trigger: GGCAAGAGAAGACAGAGCATGGGTGTGAATAAAGCAGGGAGGTAAAGAGATACAGACATAAGGTGGGCGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CAA 90 bp | TACATATGCAGCTGGAGCCATGAGTCCCACCTTGTGTACTCTTTGGTGGGTGATCCTATTGTGGGGCTTTaGTGTATTCTGCTGGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: YICSWSHESHLVYSLVGDPIVGL*CILLEV Trigger: AACCTCCAGCAGAATACACAAAAGCCCCACAATAGG...ATCACCCACCAAAGAGTACACAAGGTGGGACTCATGGCTCCAGCTGCATATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTTCAGCTCCTTAGATCCTTTCTATAGCTCCTTCATTGGGGACCCTGTGCTCGTTAGATACATTTCTTaGGGTTTCCCTTTGGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: PFSSLDPFYSSFIGDPVLVRYIS*GFPLAC Trigger: ACAGGCCAAAGGGAAACCCAAAGAAATGTATCTAAC...GAGCACAGGGTCCCCAATGAAGGAGCTATAGAAAGGATCTAAGGAGCTGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 72 bp | CTCCTTCATTGGGGACCCTGTGCTCAGTCCAATGGATaGGTGCAAGAATTTACCTCTATATTTGTCAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: LLHWGPCAQSNG*VQEFTSIFVSH Trigger: GTGACTGACAAATATAGAGGTAAATTCTTGCACCCATCCATTGGACTGAGCACAGGGTCCCCAATGAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTTCAGCTCCTTAGATCCTTTCTATAGCTCCTTCATTGGGGACCCTGTGCTCTTCATAAGTTCTCCATaGGATAGGGCCTATAAGTAT | + |
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Preference number: 3 (lower is better) Translates to: PFSSLDPFYSSFIGDPVLFISSP*DRAYKY Trigger: ATACTTATAGGCCCTATCCAATGGAGAACTTATGAA...GAGCACAGGGTCCCCAATGAAGGAGCTATAGAAAGGATCTAAGGAGCTGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 72 bp | ATAGCTCCTTCATTGGGGACCCTGTGCTCAGTCCAATaGATGGGTGCAAGAATTTACCTCTATATTTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: IAPSLGTLCSVQ*MGARIYLYICQ Trigger: CTGACAAATATAGAGGTAAATTCTTGCACCCATCCATTGGACTGAGCACAGGGTCCCCAATGAAGGAGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 72 bp | GTTCTCCATTGGATAGGGCCTATAAGTATTCTACCATaGAAGGAGGCTCTTCTTAAAATGGTCACTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VLHWIGPISILP*KEALLKMVTAS Trigger: GGAAGCAGTGACCATTTTAAGAAGAGCCTCCTTCCATGGTAGAATACTTATAGGCCCTATCCAATGGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR TCA 72 bp | GCCTTTGAAAAAGACACTCTAATGGTCAGGGGGCCATaGCATGCAGCTGATATGGAAGTGTTAAAGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: AFEKDTLMVRGP*HAADMEVLKEK Trigger: TTTTTCCTTTAACACTTCCATATCAGCTGCATGTCATGGCCCCCTGACCATTAGAGTGTCTTTTTCAAAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTACACAGCTGCAAGTTCTaGATTTCCCCAAAAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: IGRSEDRERANQTTLKSLHSCKF*ISPKAT Trigger: TGTGGCTTTTGGGGAAATCAAGAACTTGCAGCTGTG...TAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGCCACTGTACCTAGACAGCAAAAATTGCTAAAGACACCACATACCTCTAAGAGTGTGACAGGACTGTaGCATTGGAAATCACAACAG | + |
|
Preference number: 3 (lower is better) Translates to: FATVPRQQKLLKTPHTSKSVTGL*HWKSQQ Trigger: CTGTTGTGATTTCCAATGCAACAGTCCTGTCACACT...CTTAGAGGTATGTGGTGTCTTTAGCAATTTTTGCTGTCTAGGTACAGTGGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR TCA 72 bp | TTAGATACATTTCTTTGGGTTTCCCTTTGGCCTGTATaGGTGTTAGTAACCTCCACCATGGCAGTTAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LDTFLWVSLWPV*VLVTSTMAVSF Trigger: AAAGCTAACTGCCATGGTGGAGGTTACTAACACTCATACAGGCCAAAGGGAAACCCAAAGAAATGTATCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR TCA 72 bp | TGCATTGGGTCACAAGAGAAGTCATGGATGCAGAAATaGTGCTTGTTGGTAAGATGCATGAGATTAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: CIGSQEKSWMQK*CLLVRCMRLDG Trigger: ACCATCTAATCTCATGCATCTTACCAACAAGCATCATTTCTGCATCCATGACTTCTCTTGTGACCCAATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR GCA 72 bp | GAAGTATTCCTCAGCTCCCATAACAATACAAGCAATTaGCATTATAGTTGGTTTGCCACTGTACCTAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: EVFLSSHNNTSN*HYSWFATVPRQ Trigger: CTGTCTAGGTACAGTGGCAAACCAACTATAATGGCAATTGCTTGTATTGTTATGGGAGCTGAGGAATACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR TCA 72 bp | TTGATTCGATCTTTCCCTAGCACAGCTGCAAGTTCTTaGTTTCCCCAAAAGCCACATTTACATCTGAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LIRSFPSTAASS*FPQKPHLHLNQ Trigger: TTGATTCAGATGTAAATGTGGCTTTTGGGGAAATCAAGAACTTGCAGCTGTGCTAGGGAAAGATCGAATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 72 bp | TGGGTGCAAGAATTTACCTCTATATTTGTCAGTCACTaGTGGAAGATTCAATTCACAAACCGCATGAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: WVQEFTSIFVSH*WKIQFTNRMKL Trigger: GAGTTTCATGCGGTTTGTGAATTGAATCTTCCACCAGTGACTGACAAATATAGAGGTAAATTCTTGCACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 72 bp | GGAAAGGAGAGACATTTTCTTCAGAGGTATAGCCATTaGCTAAATGCTCTTACTCCTGTAAACAACCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: GKERHFLQRYSH*LNALTPVNNLI Trigger: TATTAGGTTGTTTACAGGAGTAAGAGCATTTAGCCAATGGCTATACCTCTGAAGAAAATGTCTCTCCTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 72 bp | GTGCAAGAATTTACCTCTATATTTGTCAGTCACTGGTaGAAGATTCAATTCACAAACCGCATGAAACTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VQEFTSIFVSHW*KIQFTNRMKLK Trigger: CTTGAGTTTCATGCGGTTTGTGAATTGAATCTTCCACCAGTGACTGACAAATATAGAGGTAAATTCTTGCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR GCA 72 bp | CACCAAATACCAGACACTTTTGTGGAAACCAACAAGTaGTTACTGACAGAAGCCTGTTATATAAATCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: HQIPDTFVETNK*LLTEACYINLK Trigger: CTTAAGATTTATATAACAGGCTTCTGTCAGTAAGCACTTGTTGGTTTCCACAAAAGTGTCTGGTATTTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR TCA 72 bp | GTGGAAGATTTGGAGAATGGTAATCTTTATTGTAGTTaGGCATGTAAACAGTTCTATAAACCATGGAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VEDLENGNLYCS*ACKQFYKPWKA Trigger: TGCTTTCCATGGTTTATAGAACTGTTTACATGCTCAACTACAATAAAGATTACCATTCTCCAAATCTTCCAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CCA 72 bp | AAGAAGTTGTTCATTGGAGCTAGAGAGATAACTCAGTaGTTAAGAGCAGTTGTTCTTATAGGAAATATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KKLFIGAREITQ*LRAVVLIGNID Trigger: ATCTATATTTCCTATAAGAACAACTGCTCTTAACCACTGAGTTATCTCTCTAGCTCCAATGAACAACTTCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CAA 72 bp | TGCAGCTGGAGCCATGAGTCCCACCTTGTGTACTCTTaGGTGGGTGATTTAGTCCCTGGGAGCTCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSWSHESHLVYS*VGDLVPGSSGG Trigger: ACCCCCAGAGCTCCCAGGGACTAAATCACCCACCAAAGAGTACACAAGGTGGGACTCATGGCTCCAGCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR TCA 90 bp | CCTCACCAATCCACCCACATCTACTGCCTGGCCCTGACATTCCCCTACACTGGGGATGCCCCAAGAACATaGAGAACAAATATCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHQSTHIYCLALTFPYTGDAPRT*RTNIWK Trigger: CTTCCAGATATTTGTTCTTCATGTTCTTGGGGCATC...CCCAGTGTAGGGGAATGTCAGGGCCAGGCAGTAGATGTGGGTGGATTGGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR CCA 90 bp | CCCTTCAGCTCCTTAGATCCTTTCTATAGCTCCTTCATTGGGGACCCTGTGCTCTCCTCAGCGTGTAAATaGCAGGGTTCAGGATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFSSLDPFYSSFIGDPVLSSACK*QGSGWV Trigger: CACCCATCCTGAACCCTGCCATTTACACGCTGAGGA...GAGCACAGGGTCCCCAATGAAGGAGCTATAGAAAGGATCTAAGGAGCTGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CAA 72 bp | CAGGACAGGGTTAGATACATTTCTTTGGGTTTCCCTTaGGCCTGTATGAGTGTTAGTAACCTCCACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QDRVRYISLGFP*ACMSVSNLHHG Trigger: GCCATGGTGGAGGTTACTAACACTCATACAGGCCAAAGGGAAACCCAAAGAAATGTATCTAACCCTGTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR TCA 90 bp | CCAATGGATGGGTGCAAGAATTTACCTCTATATTTGTCAGTCACTGGTGGAAGAGTGAGCAGAAAGTGTTaGGAGGGCCTTGGACAAATC | + |
|
Preference number: 4 (lower is better) Translates to: PMDGCKNLPLYLSVTGGRVSRKC*EGLGQI Trigger: GATTTGTCCAAGGCCCTCTCAACACTTTCTGCTCAC...TCTTCCACCAGTGACTGACAAATATAGAGGTAAATTCTTGCACCCATCCATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR CCA 90 bp | CATCCAGAGACTGCCCTACCTGAGGATCTATCCCATATACAATCACCAAATACCAACCCTGGAATGAGATaGTATTATGCCCAGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HPETALPEDLSHIQSPNTNPGMR*YYAQRT Trigger: TGTCCTCTGGGCATAATACCATCTCATTCCAGGGTT...GGTATTTGGTGATTGTATATGGGATAGATCCTCAGGTAGGGCAGTCTCTGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR TCA 90 bp | GGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTATACACTACCACGGAGATGTaGGCAGAAAGTGTTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRSEDRERANQTTLKSLYTTTEM*AESVER Trigger: CCTCTCAACACTTTCTGCTCACATCTCCGTGGTAGT...GTATAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR TCA 90 bp | CAATCACCAAATACCAGACACTTTTGTGGAAACCAACAAGTGCTTACTGACAGAGACACAACCCTGGAATaGGATGGTATTATGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSPNTRHFCGNQQVLTDRDTTLE*DGIMPR Trigger: TCTGGGCATAATACCATCTCATTCCAGGGTTGTGTC...TCTGTCAGTAAGCACTTGTTGGTTTCCACAAAAGTGTCTGGTATTTGGTGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR CCA 90 bp | ATAGGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTAATCTGTCCCAGGCCATaGCTACCAGCAATACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IGRSEDRERANQTTLKSLICPRP*LPAIPS Trigger: AGATGGTATTGCTGGTAGCCATGGCCTGGGACAGAT...TAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR GCA 90 bp | CCAATGGATGGGTGCAAGAATTTACCTCTATATTTGTCAGTCACTGGTGGAAGAAATGAGATGGTATTATaGCCAGAGGACAGGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PMDGCKNLPLYLSVTGGRNEMVL*PEDRSE Trigger: TTCTGACCTGTCCTCTGGGCATAATACCATCTCATT...TCTTCCACCAGTGACTGACAAATATAGAGGTAAATTCTTGCACCCATCCATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR CCA 90 bp | CCAATGGATGGGTGCAAGAATTTACCTCTATATTTGTCAGTCACTGGTGGAAGAGTACACGAAGATGCATaGTCCAAAGAACAAAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: PMDGCKNLPLYLSVTGGRVHEDA*SKEQNY Trigger: GTAGTTTTGTTCTTTGGACCATGCATCTTCGTGTAC...TCTTCCACCAGTGACTGACAAATATAGAGGTAAATTCTTGCACCCATCCATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR GCA 90 bp | CCAATGGATGGGTGCAAGAATTTACCTCTATATTTGTCAGTCACTGGTGGAAGAACATGTACACGAAGATaGATGGTCCAAAGAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PMDGCKNLPLYLSVTGGRTCTRR*MVQRTK Trigger: TTTTGTTCTTTGGACCATGCATCTTCGTGTACATGT...TCTTCCACCAGTGACTGACAAATATAGAGGTAAATTCTTGCACCCATCCATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR CCA 90 bp | ATAGGAAGAAGTGAAGATAGAGAGAGGGCCAACCAAACTACTTTGAAAAGCTTATGGAAGACACAACCCTaGAATGAGATGGTATTATGC | + |
|
Preference number: 4 (lower is better) Translates to: IGRSEDRERANQTTLKSLWKTQP*NEMVLC Trigger: GCATAATACCATCTCATTCCAGGGTTGTGTCTTCCA...TAAGCTTTTCAAAGTAGTTTGGTTGGCCCTCTCTCTATCTTCACTTCTTCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS-3UTR CCA 90 bp | ATATCAGGGAAGATATTCTTTGCAATGAACAATGGTGAAGCGCAGATGCATAGCCCACAAAATCTCAAATaGACAACAAAACCTAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISGKIFFAMNNGEAQMHSPQNLK*TTKPSW Trigger: CCAACTAGGTTTTGTTGTCCATTTGAGATTTTGTGG...GCTATGCATCTGCGCTTCACCATTGTTCATTGCAAAGAATATCTTCCCTGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CAA 72 bp | TATAGTTGGTTTGCCACTGTACCTAGACAGCAAAAATaGCTAAAGACACCACATACCTCTAAGTACATACAG | + |
|
Preference number: 4 (lower is better) Translates to: YSWFATVPRQQK*LKTPHTSKYIQ Trigger: CTGTATGTACTTAGAGGTATGTGGTGTCTTTAGCAATTTTTGCTGTCTAGGTACAGTGGCAAACCAACTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| 3UTR CAA 72 bp | GTAATGTTGACTTCTGAGTGTGACAGGACTGTTGCATaGGAAATCACAACAGCTATGACTATTTTCATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VMLTSECDRTVA*EITTAMTIFIS Trigger: ACTTATGAAAATAGTCATAGCTGTTGTGATTTCCAATGCAACAGTCCTGTCACACTCAGAAGTCAACATTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS CCA 90 bp | GATGGGTGTAATCATGAAGTCCAGAATGGCAAGGAACTTATCCACTaGCACAGTAGGAAACGGCCACATGTACACGAAGATGCATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DGCNHEVQNGKELIH*HSRKRPHVHEDAWS Trigger: GGACCATGCATCTTCGTGTACATGTGGCCGTTTCCTACTGTGCCAGTGGATAAGTTCCTTGCCATTCTGGACTTCATGATTACACCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073322.2 ENSMUST00000218065.2 |
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| CDS TCA 90 bp | CCCAAGAACATGAAGAACAAATATCTGGAAGACACAACCCTGGAATaGGATGGTATTATGCCCAGAGGACAGGTCAGAAATCATCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PKNMKNKYLEDTTLE*DGIMPRGQVRNHLG Trigger: CCCAAGATGATTTCTGACCTGTCCTCTGGGCATAATACCATCTCATTCCAGGGTTGTGTCTTCCAGATATTTGTTCTTCATGTTCTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073322.2 ENSMUST00000218065.2 |
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| CDS-3UTR CAA 90 bp | CCAATGGATGGGTGCAAGAATTTACCTCTATATTTGTCAGTCACTGGTGGAAGATCTATGCAGGCCAGTTaGATAAACCTAGGAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: PMDGCKNLPLYLSVTGGRSMQAS*INLGRS Trigger: TGATCTTCCTAGGTTTATCAAACTGGCCTGCATAGA...TCTTCCACCAGTGACTGACAAATATAGAGGTAAATTCTTGCACCCATCCATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218065.2 |
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| CDS CCA 72 bp | AATCATGAAGTCCAGAATGGCAAGGAACTTATCCACTaGCACAGTAGGAAACGGCCACATGTACACGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: NHEVQNGKELIH*HSRKRPHVHED Trigger: ATCTTCGTGTACATGTGGCCGTTTCCTACTGTGCCAGTGGATAAGTTCCTTGCCATTCTGGACTTCATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073322.2 ENSMUST00000218065.2 |
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| CDS TCA 72 bp | GCTACCAGCAATACCATCTCAGATGCCCCAAGAACATaGAGAACAAATATCTGGAAGACACAACCCTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: ATSNTISDAPRT*RTNIWKTQPWN Trigger: ATTCCAGGGTTGTGTCTTCCAGATATTTGTTCTTCATGTTCTTGGGGCATCTGAGATGGTATTGCTGGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073322.2 ENSMUST00000218065.2 |
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| CDS CAA 90 bp | TGGAATGAGATGGTATTATGCCCAGAGGACAGGTCAGAAATCATCTaGGGTACGGTTAAGGTGGAAAGACATAAGTCAATAAATGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WNEMVLCPEDRSEII*GTVKVERHKSINER Trigger: CCTCTCATTTATTGACTTATGTCTTTCCACCTTAACCGTACCCAAGATGATTTCTGACCTGTCCTCTGGGCATAATACCATCTCATTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073322.2 ENSMUST00000218065.2 |
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| CDS TCA 72 bp | ATGAAGAACAAATATCTGGAAGACACAACCCTGGAATaGGATGGTATTATGCCCAGAGGACAGGTCAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: MKNKYLEDTTLE*DGIMPRGQVRN Trigger: ATTTCTGACCTGTCCTCTGGGCATAATACCATCTCATTCCAGGGTTGTGTCTTCCAGATATTTGTTCTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073322.2 ENSMUST00000218065.2 |
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| CDS CAA 72 bp | ATGGTATTATGCCCAGAGGACAGGTCAGAAATCATCTaGGGTACGGTTAAGGTGGAAAGACATAAGTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: MVLCPEDRSEII*GTVKVERHKSI Trigger: TATTGACTTATGTCTTTCCACCTTAACCGTACCCAAGATGATTTCTGACCTGTCCTCTGGGCATAATACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073322.2 ENSMUST00000218065.2 |
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