Pregenerated sensors for OLFR1271 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075062Ensembl transcript IDs: ENSMUST00000216383.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCCTGGCAAATACAGAAGCAGATGCTCACAGTCATCAATAGGATaGAACACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GPGKYRSRCSQSSIG*NTGPPVEELEKVPK Trigger: CTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTGTTCCATCCTATTGATGACTGTGAGCATCTGCTTCTGTATTTGCCAGGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR GCA 90 bp | GTCTCTTATGAACCTATGCCAGGGCCTGGCAAATACAGAAGCAGATaGTCACAGTCATCAATAGGATGGAACACAGGGCCCCCAGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: VSYEPMPGPGKYRSR*SQSSIGWNTGPPVE Trigger: CTCCACTGGGGGCCCTGTGTTCCATCCTATTGATGACTGTGAGCATCTGCTTCTGTATTTGCCAGGCCCTGGCATAGGTTCATAAGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 90 bp | GCTGCCTTGTCTGGACTCAGTGGGAGAAGAAGCATCTCAGAAACTTaGAGTGCCAGGGTGAGAGAAGATTTCCAAGAGGCCCATCCCATT | + |
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Preference number: 1 (lower is better) Translates to: AALSGLSGRRSISET*SARVREDFQEAHPI Trigger: AATGGGATGGGCCTCTTGGAAATCTTCTCTCACCCTGGCACTTCAAGTTTCTGAGATGCTTCTTCTCCCACTGAGTCCAGACAAGGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CCA 90 bp | ACTCAAACAGATACAGACACTCACACCCAAAGTTTGGATGGAGCTTaGGGACTCTTATGGAAGAATAGGTGGAAGCATTGTGGACCCCTA | + |
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Preference number: 1 (lower is better) Translates to: TQTDTDTHTQSLDGA*GLLWKNRWKHCGPL Trigger: TAGGGGTCCACAATGCTTCCACCTATTCTTCCATAAGAGTCCCCAAGCTCCATCCAAACTTTGGGTGTGAGTGTCTGTATCTGTTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CCA 90 bp | AAGGGGAGAGGAACTCTACAGGGAGACCAACAGAGTCAATTACCCTaGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: KGRGTLQGDQQSQLP*TIGAFRSELPTKEH Trigger: ATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATTGACTCTGTTGGTCTCCCTGTAGAGTTCCTCTCCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 90 bp | ATAAGTTATAATTCTCAGGTTGTTCCATTCTGTCTACTGAGGACATaGATGCCCACTTTGCCATGGTTATTCATGTGTATGCCACCCAAC | + |
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Preference number: 1 (lower is better) Translates to: ISYNSQVVPFCLLRT*MPTLPWLFMCMPPN Trigger: GTTGGGTGGCATACACATGAATAACCATGGCAAAGTGGGCATTCATGTCCTCAGTAGACAGAATGGAACAACCTGAGAATTATAACTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 90 bp | GATAGTCTGTCCATTGTAGAGAGATTGTGGGTGACATGGAAATTCTaGAAGGTGAAATGGCATTTTAGGCACACTTCTCTGGTATTTCTC | + |
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Preference number: 1 (lower is better) Translates to: DSLSIVERLWVTWKF*KVKWHFRHTSLVFL Trigger: GAGAAATACCAGAGAAGTGTGCCTAAAATGCCATTTCACCTTTCAGAATTTCCATGTCACCCACAATCTCTCTACAATGGACAGACTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 90 bp | ATTAATTTACCTGGTCTGGATAAATATCAACAGATGCACAGAAAATaGAGTGCAGGCCACAGTCATCTCAAAGCTGAAAGGGGCCAACTT | + |
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Preference number: 1 (lower is better) Translates to: INLPGLDKYQQMHRK*SAGHSHLKAERGQL Trigger: AAGTTGGCCCCTTTCAGCTTTGAGATGACTGTGGCCTGCACTTCATTTTCTGTGCATCTGTTGATATTTATCCAGACCAGGTAAATTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 90 bp | TTCAGTTTGTCTACTCCTCTTCTACCAAATGTAGTATATCTTGCCTaGGGAATGGTGGCATACACTGTGGATGAGTTGACTATTAATCAA | + |
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Preference number: 1 (lower is better) Translates to: FSLSTPLLPNVVYLA*GMVAYTVDELTINQ Trigger: TTGATTAATAGTCAACTCATCCACAGTGTATGCCACCATTCCTCAGGCAAGATATACTACATTTGGTAGAAGAGGAGTAGACAAACTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 90 bp | AGTGAGGCAACCCAGGCCCTAAAGGACATGCATGGCAGGAGCATGTaGTCCTCTGAGAGGCTCAACCTAGCAGCTGACTCAAACAGATAC | + |
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Preference number: 2 (lower is better) Translates to: SEATQALKDMHGRSM*SSERLNLAADSNRY Trigger: GTATCTGTTTGAGTCAGCTGCTAGGTTGAGCCTCTCAGAGGACAACATGCTCCTGCCATGCATGTCCTTTAGGGCCTGGGTTGCCTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 90 bp | GGCTGCCTTGTCTGGACTCAGTGGGAGAAGAAGCATCTCAGAAACTaGAAGTGCCAGGGTGAGAGAAGATTTCCAAGAGGCCCATCCCAT | + |
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Preference number: 2 (lower is better) Translates to: GCLVWTQWEKKHLRN*KCQGERRFPRGPSH Trigger: ATGGGATGGGCCTCTTGGAAATCTTCTCTCACCCTGGCACTTCAAGTTTCTGAGATGCTTCTTCTCCCACTGAGTCCAGACAAGGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR TCA 90 bp | TATGCCCCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGATAGGCAGAACCCATTTCAATaGGCACAAAACCCAAGACAT | + |
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Preference number: 2 (lower is better) Translates to: YAPVQGNARAKKWEWVDRQNPFQ*AQNPRH Trigger: ATGTCTTGGGTTTTGTGCTCATTGAAATGGGTTCTG...CCTATCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGGGGGTATCCCAAAACCTGTTTCCTGTATGTGAGATATCTTCTACTAGCGCCAGGGCCAAGAAGTaGGAGTGGGTGGATAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: WKGVSQNLFPVCEISSTSARAKK*EWVDRG Trigger: TCCCCTATCCACCCACTCCCACTTCTTGGCCCTGGC...GCTAGTAGAAGATATCTCACATACAGGAAACAGGTTTTGGGATACCCCCTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGGGGGTATCCCAAAACCTGTTTCCTGTATGTGAGATATCTTCTACTAGCGGACGGACCACTCTCTaGTGTGTGACAGCTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: WKGVSQNLFPVCEISSTSGRTTL*CVTALQ Trigger: CTGCAGAGCTGTCACACAGCAGAGAGTGGTCCGTCC...GCTAGTAGAAGATATCTCACATACAGGAAACAGGTTTTGGGATACCCCCTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR GCA 90 bp | TATGCCCCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGATAGGCTAGAAGAAGTGATGTaGTCAAACACAAGGTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: YAPVQGNARAKKWEWVDRLEEVM*SNTRFL Trigger: CAAAAACCTTGTGTTTGAGCACATCACTTCTTCTAG...CCTATCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR GCA 90 bp | TATGCCCCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGATAGGCCAGCATTCATTGCATaGTTATCTTTTACAAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: YAPVQGNARAKKWEWVDRPAFIA*LSFTSV Trigger: CACACTTGTAAAAGATAAGCATGCAATGAATGCTGG...CCTATCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CCA 90 bp | TATGCCCCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGATAGGTTGATCCATTTTCTCTaGAAGCTGCTGGCATTAATT | + |
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Preference number: 2 (lower is better) Translates to: YAPVQGNARAKKWEWVDRLIHFL*KLLALI Trigger: AATTAATGCCAGCAGCTTCCAGAGAAAATGGATCAA...CCTATCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACACCCAAAGTTTGGATGGAGCTTGGGGACTCTTATGGAAGAATAGGTGGATTGCCTGAGGAATGGTaGCATACACTGTGGATGAGT | + |
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Preference number: 2 (lower is better) Translates to: LTPKVWMELGDSYGRIGGLPEEW*HTLWMS Trigger: ACTCATCCACAGTGTATGCCACCATTCCTCAGGCAA...TCCACCTATTCTTCCATAAGAGTCCCCAAGCTCCATCCAAACTTTGGGTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGGGGGTATCCCAAAACCTGTTTCCTGTATGTGAGATATCTTCTACTAGCCAAGTGGACTGTCCTTaGAGCTGTGACAGGCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: WKGVSQNLFPVCEISSTSQVDCP*SCDRLF Trigger: AAACAGCCTGTCACAGCTTCAAGGACAGTCCACTTG...GCTAGTAGAAGATATCTCACATACAGGAAACAGGTTTTGGGATACCCCCTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR GCA 90 bp | AATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCATACCCAGTACAGGGGAATaGCAGGGCCAAGAAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: NYPGPLELSDLNYQQKSIPSTGE*QGQEVG Trigger: TCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGG...TATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 90 bp | GAGGAACTCTACAGGGAGACCAACAGAGTCAATTACCCTGGACCATaGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCATACACTGG | + |
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Preference number: 2 (lower is better) Translates to: EELYRETNRVNYPGP*ELSDLNYQQKSIHW Trigger: CCAGTGTATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATTGACTCTGTTGGTCTCCCTGTAGAGTTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACACCCAAAGTTTGGATGGAGCTTGGGGACTCTTATGGAAGAATAGGTGGAATGCCCACTTTGCCATaGTTATTCATGTGTATGCCA | + |
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Preference number: 2 (lower is better) Translates to: LTPKVWMELGDSYGRIGGMPTLP*LFMCMP Trigger: TGGCATACACATGAATAACCATGGCAAAGTGGGCAT...TCCACCTATTCTTCCATAAGAGTCCCCAAGCTCCATCCAAACTTTGGGTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACACCCAAAGTTTGGATGGAGCTTGGGGACTCTTATGGAAGAATAGGTGGATGGAGCTTTCAGATCTaGATTACCAACAAAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LTPKVWMELGDSYGRIGGWSFQI*ITNKRA Trigger: TGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCA...TCCACCTATTCTTCCATAAGAGTCCCCAAGCTCCATCCAAACTTTGGGTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGGGGGTATCCCAAAACCTGTTTCCTGTATGTGAGATATCTTCTACTAGCACAGGCTGTTTAGTGTaGAACTTGGGACTTTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: WKGVSQNLFPVCEISSTSTGCLV*NLGLLW Trigger: CCACAAAAGTCCCAAGTTCCACACTAAACAGCCTGT...GCTAGTAGAAGATATCTCACATACAGGAAACAGGTTTTGGGATACCCCCTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR GCA 90 bp | CTCACACCCAAAGTTTGGATGGAGCTTGGGGACTCTTATGGAAGAATAGGTGGAAAATACAGAAGCAGATaGTCACAGTCATCAATAGGA | + |
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Preference number: 2 (lower is better) Translates to: LTPKVWMELGDSYGRIGGKYRSR*SQSSIG Trigger: TCCTATTGATGACTGTGAGCATCTGCTTCTGTATTT...TCCACCTATTCTTCCATAAGAGTCCCCAAGCTCCATCCAAACTTTGGGTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGTGCTCATCTACATATTaGGCCGGTATCCCTAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SQLPWTIGAFRSELPTKECSSTY*AGIPKR Trigger: TCTCTTAGGGATACCGGCTCAATATGTAGATGAGCA...CTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR TCA 90 bp | AATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCATATATAACTGTCTCTTATaGACCTATGCCAGGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: NYPGPLELSDLNYQQKSIYNCLL*TYARAW Trigger: CCAGGCCCTGGCATAGGTTCATAAGAGACAGTTATA...TATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACACCCAAAGTTTGGATGGAGCTTGGGGACTCTTATGGAAGAATAGGTGGAGTGACTGAAAACTATTaGTATAGGCATAAAAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LTPKVWMELGDSYGRIGGVTENY*YRHKKV Trigger: GACCTTTTTATGCCTATACCAATAGTTTTCAGTCAC...TCCACCTATTCTTCCATAAGAGTCCCCAAGCTCCATCCAAACTTTGGGTGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGGTTCTTGTAAGAGCATaGACAAGACAAGTGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: SQLPWTIGAFRSELPTKEVLVRA*TRQVDC Trigger: ACAGTCCACTTGTCTTGTTCATGCTCTTACAAGAAC...CTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR GCA 90 bp | AATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCATACTCAGAAACTTGAAGTaGCAGGGTGAGAGAAGATTT | + |
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Preference number: 2 (lower is better) Translates to: NYPGPLELSDLNYQQKSILRNLK*QGERRF Trigger: AAATCTTCTCTCACCCTGGCACTTCAAGTTTCTGAG...TATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAAGAATAACCAGCATTCATTGCATGCTTATCTTTTACAAGTGTGTGGCTCATTCCATTCTGTCTACTaGGGACATGAATGCCCACTT | + |
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Preference number: 2 (lower is better) Translates to: IKNNQHSLHAYLLQVCGSFHSVY*GHECPL Trigger: AAGTGGGCATTCATGTCCTCAGTAGACAGAATGGAA...TGAGCCACACACTTGTAAAAGATAAGCATGCAATGAATGCTGGTTATTCTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR GCA 90 bp | AATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCATAATCACACATCTAGCATaGTTGATCCATTTTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: NYPGPLELSDLNYQQKSIITHLA*LIHFLW Trigger: CCAGAGAAAATGGATCAAGCATGCTAGATGTGTGAT...TATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CCA 90 bp | AATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCATATCTTTTACAAGTGTGTaGCTCATGAGCCATCAACTT | + |
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Preference number: 2 (lower is better) Translates to: NYPGPLELSDLNYQQKSISFTSV*LMSHQL Trigger: AAGTTGATGGCTCATGAGCCACACACTTGTAAAAGA...TATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 90 bp | CATGCTGACAAATGTCCAAGTGACATAAAATCACTCAGGGCTTCCTaGAGCATAAAGAATAACCAGCATTCATTGCATGCTTATCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: HADKCPSDIKSLRAS*SIKNNQHSLHAYLL Trigger: TAAAAGATAAGCATGCAATGAATGCTGGTTATTCTTTATGCTCAAGGAAGCCCTGAGTGATTTTATGTCACTTGGACATTTGTCAGCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR GCA 90 bp | AATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCATAAAATGTAGTATATCTTaGCTGAGGAATGGTGGCATA | + |
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Preference number: 2 (lower is better) Translates to: NYPGPLELSDLNYQQKSIKCSIS*LRNGGI Trigger: TATGCCACCATTCCTCAGGCAAGATATACTACATTT...TATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CCA 90 bp | AATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCATAAATGGCAGAAAGCATTaGATTAAGTCAAGCATGTTT | + |
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Preference number: 2 (lower is better) Translates to: NYPGPLELSDLNYQQKSINGRKH*IKSSMF Trigger: AAACATGCTTGACTTAATCCAATGCTTTCTGCCATT...TATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 90 bp | CAGCACCATTTGTTAGAGATACTTCCTTTTGTCCATTGTATGGTTTaGGCTTCTTTGTCAAAAATCAAGTGTCACATTATATCCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: QHHLLEILPFVHCMV*ASLSKIKCHIISTV Trigger: AACTGTGGATATAATGTGACACTTGATTTTTGACAAAGAAGCCAAAACCATACAATGGACAAAAGGAAGTATCTCTAACAAATGGTGCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR GCA 72 bp | GAACCTATGCCAGGGCCTGGCAAATACAGAAGCAGATaGTCACAGTCATCAATAGGATGGAACACAGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: EPMPGPGKYRSR*SQSSIGWNTGP Trigger: GGGCCCTGTGTTCCATCCTATTGATGACTGTGAGCATCTGCTTCTGTATTTGCCAGGCCCTGGCATAGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CAA 90 bp | TATGCCCCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGATAGGGACCCTTTTGGATTTTaGTTTAACTCTGCTACAGGA | + |
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Preference number: 3 (lower is better) Translates to: YAPVQGNARAKKWEWVDRDPFGF*FNSATG Trigger: TCCTGTAGCAGAGTTAAACAAAAATCCAAAAGGGTC...CCTATCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CAA 90 bp | TATGCCCCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGATAGGTTGTTGTTCTTCAGTTaGTCTACTCCTCTTCTACCA | + |
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Preference number: 3 (lower is better) Translates to: YAPVQGNARAKKWEWVDRLLFFS*STPLLP Trigger: TGGTAGAAGAGGAGTAGACAAACTGAAGAACAACAA...CCTATCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CAA 90 bp | TATGCCCCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGATAGGATGGTTTTGGCTTCTTaGTCAAAAATCAAGTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: YAPVQGNARAKKWEWVDRMVLAS*SKIKCH Trigger: GTGACACTTGATTTTTGACAAAGAAGCCAAAACCAT...CCTATCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CCA 72 bp | GCATTCAGGATGACCAACATGTGGGTCCTGACCAACTaGAAGGGGGTATCCCAAAACCTGTTTCCTGTATGT | + |
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Preference number: 3 (lower is better) Translates to: AFRMTNMWVLTN*KGVSQNLFPVC Trigger: ACATACAGGAAACAGGTTTTGGGATACCCCCTTCCAGTTGGTCAGGACCCACATGTTGGTCATCCTGAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CCA 72 bp | CACACCCAAAGTTTGGATGGAGCTTGGGGACTCTTATaGAAGAATAGGTGGAAGCATTGTGGACCCCTAAGG | + |
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Preference number: 3 (lower is better) Translates to: HTQSLDGAWGLL*KNRWKHCGPLR Trigger: CCTTAGGGGTCCACAATGCTTCCACCTATTCTTCCATAAGAGTCCCCAAGCTCCATCCAAACTTTGGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CCA 72 bp | TGGACTGTCCTTGAAGCTGTGACAGGCTGTTTAGTGTaGAACTTGGGACTTTTGTGGCTTCTCCCTAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: WTVLEAVTGCLV*NLGLLWLLPKS Trigger: AGACTTAGGGAGAAGCCACAAAAGTCCCAAGTTCCACACTAAACAGCCTGTCACAGCTTCAAGGACAGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CCA 72 bp | AAATACAGAAGCAGATGCTCACAGTCATCAATAGGATaGAACACAGGGCCCCCAGTGGAGGAGCTAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: KYRSRCSQSSIG*NTGPPVEELEK Trigger: TTTCTCTAGCTCCTCCACTGGGGGCCCTGTGTTCCATCCTATTGATGACTGTGAGCATCTGCTTCTGTATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 72 bp | GAGTCAATTACCCTGGACCATTGGAGCTTTCAGATCTaGATTACCAACAAAAGAGCATACACTGGCTGGACC | + |
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Preference number: 3 (lower is better) Translates to: ESITLDHWSFQI*ITNKRAYTGWT Trigger: GGTCCAGCCAGTGTATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR GCA 72 bp | CCCAACTCTCAGTCACACTGTGTCAAGCCCACAGCCTaGTGTCATAGCTCAAATGTAACCCTTATTTTACTT | + |
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Preference number: 3 (lower is better) Translates to: PNSQSHCVKPTA*CHSSNVTLILL Trigger: AAGTAAAATAAGGGTTACATTTGAGCTATGACAGCAGGCTGTGGGCTTGACACAGTGTGACTGAGAGTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CCA 72 bp | GGAACTCTACAGGGAGACCAACAGAGTCAATTACCCTaGACCATTGGAGCTTTCAGATCTGAATTACCAACA | + |
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Preference number: 3 (lower is better) Translates to: GTLQGDQQSQLP*TIGAFRSELPT Trigger: TGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATTGACTCTGTTGGTCTCCCTGTAGAGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CCA 72 bp | GATACAGACACTCACACCCAAAGTTTGGATGGAGCTTaGGGACTCTTATGGAAGAATAGGTGGAAGCATTGT | + |
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Preference number: 3 (lower is better) Translates to: DTDTHTQSLDGA*GLLWKNRWKHC Trigger: ACAATGCTTCCACCTATTCTTCCATAAGAGTCCCCAAGCTCCATCCAAACTTTGGGTGTGAGTGTCTGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CAA 90 bp | CTCACACCCAAAGTTTGGATGGAGCTTGGGGACTCTTATGGAAGAATAGGTGGAAGGCATAAAAAGGTCTaGTGTTTCCTGATGCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LTPKVWMELGDSYGRIGGRHKKV*CFLMPF Trigger: AAATGGCATCAGGAAACACAAGACCTTTTTATGCCT...TCCACCTATTCTTCCATAAGAGTCCCCAAGCTCCATCCAAACTTTGGGTGTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CAA 90 bp | CTCACACCCAAAGTTTGGATGGAGCTTGGGGACTCTTATGGAAGAATAGGTGGAGCCATGATAGTTCCATaGCTTGGTTCCTTTTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: LTPKVWMELGDSYGRIGGAMIVP*LGSFSK Trigger: TTTAGAAAAGGAACCAAGCAATGGAACTATCATGGC...TCCACCTATTCTTCCATAAGAGTCCCCAAGCTCCATCCAAACTTTGGGTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 72 bp | CCTGGTCTGGATAAATATCAACAGATGCACAGAAAATaGAGTGCAGGCCACAGTCATCTCAAAGCTGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGLDKYQQMHRK*SAGHSHLKAER Trigger: CCTTTCAGCTTTGAGATGACTGTGGCCTGCACTTCATTTTCTGTGCATCTGTTGATATTTATCCAGACCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CAA 90 bp | CTCACACCCAAAGTTTGGATGGAGCTTGGGGACTCTTATGGAAGAATAGGTGGACCATCAAAGACCCTTTaGGATTTTTGTTTAACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LTPKVWMELGDSYGRIGGPSKTL*DFCLTL Trigger: CAGAGTTAAACAAAAATCCAAAAGGGTCTTTGATGG...TCCACCTATTCTTCCATAAGAGTCCCCAAGCTCCATCCAAACTTTGGGTGTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 72 bp | TCTACTCCTCTTCTACCAAATGTAGTATATCTTGCCTaGGGAATGGTGGCATACACTGTGGATGAGTTGACT | + |
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Preference number: 3 (lower is better) Translates to: STPLLPNVVYLA*GMVAYTVDELT Trigger: AGTCAACTCATCCACAGTGTATGCCACCATTCCTCAGGCAAGATATACTACATTTGGTAGAAGAGGAGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CAA 90 bp | AATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCATAAAGCATCTCAGAAACTaGAAGTGCCAGGGTGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: NYPGPLELSDLNYQQKSIKHLRN*KCQGER Trigger: TCTCTCACCCTGGCACTTCAAGTTTCTGAGATGCTT...TATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 72 bp | AATTCTCAGGTTGTTCCATTCTGTCTACTGAGGACATaGATGCCCACTTTGCCATGGTTATTCATGTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: NSQVVPFCLLRT*MPTLPWLFMCM Trigger: CATACACATGAATAACCATGGCAAAGTGGGCATTCATGTCCTCAGTAGACAGAATGGAACAACCTGAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 72 bp | ACCCAGACACTATTGCATATGCCAGCAAGATTTTGCTaGAAGGACCCTGATATAACTGTCTCTTATGAACCT | + |
|
Preference number: 3 (lower is better) Translates to: TQTLLHMPARFC*KDPDITVSYEP Trigger: AGGTTCATAAGAGACAGTTATATCAGGGTCCTTTCAGCAAAATCTTGCTGGCATATGCAATAGTGTCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CAA 90 bp | AATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCATACTTTGTATTTACACTTaGCTTCAAGCCAGAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: NYPGPLELSDLNYQQKSILCIYT*LQARDV Trigger: CACATCTCTGGCTTGAAGCAAAGTGTAAATACAAAG...TATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCAATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGAGTCAAGCATGTTTGTaGTTCTTCAGTTTGTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: SQLPWTIGAFRSELPTKESQACL*FFSLST Trigger: AGTAGACAAACTGAAGAACAACAAACATGCTTGACT...CTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 72 bp | TTCTTTGTATTTACACTTTGCTTCAAGCCAGAGATGTaGCTGAATGTCATGGATACAAACACGTTCTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: FFVFTLCFKPEM*LNVMDTNTFCK Trigger: TTTGCAGAACGTGTTTGTATCCATGACATTCAGTCACATCTCTGGCTTGAAGCAAAGTGTAAATACAAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 72 bp | ACTATTGGTATAGGCATAAAAAGGTCTTGTGTTTCCTaGTGCCATTTATTAAAACAAACGGAGGGAAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TIGIGIKRSCVS*CHLLKQTEGKV Trigger: AACCTTTCCCTCCGTTTGTTTTAATAAATGGCATCAGGAAACACAAGACCTTTTTATGCCTATACCAATAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR TCA 72 bp | TTGTATTTACACTTTGCTTCAAGCCAGAGATGTGACTaGATGTCATGGATACAAACACGTTCTGCAAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: LYLHFASSQRCD*MSWIQTRSAKI Trigger: TATTTTTGCAGAACGTGTTTGTATCCATGACATTCAGTCACATCTCTGGCTTGAAGCAAAGTGTAAATACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 72 bp | ACCCAGGCCCTAAAGGACATGCATGGCAGGAGCATGTaGTCCTCTGAGAGGCTCAACCTAGCAGCTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQALKDMHGRSM*SSERLNLAADS Trigger: TGAGTCAGCTGCTAGGTTGAGCCTCTCAGAGGACAACATGCTCCTGCCATGCATGTCCTTTAGGGCCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| CDS-3UTR CCA 90 bp | TATGCCCCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGATAGGACCACAGAAGGGCAATaGAATAGTGATGATGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: YAPVQGNARAKKWEWVDRTTEGQ*NSDDDL Trigger: CAGATCATCATCACTATTCCATTGCCCTTCTGTGGT...CCTATCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 72 bp | GCTGTGACAGGCTGTTTAGTGTGGAACTTGGGACTTTaGTGGCTTCTCCCTAAGTCTACACTAACTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVTGCLVWNLGL*WLLPKSTLTPA Trigger: GGCAGGAGTTAGTGTAGACTTAGGGAGAAGCCACAAAAGTCCCAAGTTCCACACTAAACAGCCTGTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 72 bp | GTCTGGACTCAGTGGGAGAAGAAGCATCTCAGAAACTaGAAGTGCCAGGGTGAGAGAAGATTTCCAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VWTQWEKKHLRN*KCQGERRFPRG Trigger: GCCTCTTGGAAATCTTCTCTCACCCTGGCACTTCAAGTTTCTGAGATGCTTCTTCTCCCACTGAGTCCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| CDS-3UTR CCA 90 bp | GTGACAGGCTGTTTAGTGTGGAACTTGGGACTTTTGTGGCTTCTCCCTAAGTCTCACCTTCTGAACCTCTaGATCCTGGAAAAGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTGCLVWNLGLLWLLPKSHLLNL*ILEKAS Trigger: ACTGGCCTTTTCCAGGATCCAGAGGTTCAGAAGGTG...AGACTTAGGGAGAAGCCACAAAAGTCCCAAGTTCCACACTAAACAGCCTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| CDS-3UTR CCA 90 bp | TGGAAGGGGGTATCCCAAAACCTGTTTCCTGTATGTGAGATATCTTCTACTAGCCGTTGCCCAGCAATGTaGCCAGGTACACAGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WKGVSQNLFPVCEISSTSRCPAM*PGTQEG Trigger: TCCTTCCTGTGTACCTGGCCACATTGCTGGGCAACG...GCTAGTAGAAGATATCTCACATACAGGAAACAGGTTTTGGGATACCCCCTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 72 bp | CCTGTATGTGAGATATCTTCTACTAGCTGGGCTGCCTaGTCTGGACTCAGTGGGAGAAGAAGCATCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVCEISSTSWAA*SGLSGRRSISE Trigger: TTCTGAGATGCTTCTTCTCCCACTGAGTCCAGACAAGGCAGCCCAGCTAGTAGAAGATATCTCACATACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 72 bp | GTCCTTGAAGCTGTGACAGGCTGTTTAGTGTGGAACTaGGGACTTTTGTGGCTTCTCCCTAAGTCTACACTA | + |
|
Preference number: 4 (lower is better) Translates to: VLEAVTGCLVWN*GLLWLLPKSTL Trigger: TAGTGTAGACTTAGGGAGAAGCCACAAAAGTCCCAAGTTCCACACTAAACAGCCTGTCACAGCTTCAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 72 bp | TACAGGGAGACCAACAGAGTCAATTACCCTGGACCATaGGAGCTTTCAGATCTGAATTACCAACAAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRETNRVNYPGP*ELSDLNYQQKS Trigger: GCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATTGACTCTGTTGGTCTCCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 72 bp | ATGCCCATAGGCCAAGCTAAACTAGACAATTCCTCATaGAAATTTCCTTCCCAGGTGATTCTAGATTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MPIGQAKLDNSS*KFPSQVILDFV Trigger: GACAAAATCTAGAATCACCTGGGAAGGAAATTTCAATGAGGAATTGTCTAGTTTAGCTTGGCCTATGGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 72 bp | AAATGTCCAAGTGACATAAAATCACTCAGGGCTTCCTaGAGCATAAAGAATAACCAGCATTCATTGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: KCPSDIKSLRAS*SIKNNQHSLHA Trigger: AGCATGCAATGAATGCTGGTTATTCTTTATGCTCAAGGAAGCCCTGAGTGATTTTATGTCACTTGGACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 72 bp | TTACAAAGCTGTTCTGTGTCACCATCAAAGACCCTTTaGGATTTTTGTTTAACTCTGCTACAGGAAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSCSVSPSKTL*DFCLTLLQETP Trigger: TGGAGTTTCCTGTAGCAGAGTTAAACAAAAATCCAAAAGGGTCTTTGATGGTGACACAGAACAGCTTTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 72 bp | ATGGCAGAAAGCATTGGATTAAGTCAAGCATGTTTGTaGTTCTTCAGTTTGTCTACTCCTCTTCTACCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MAESIGLSQACL*FFSLSTPLLPN Trigger: ATTTGGTAGAAGAGGAGTAGACAAACTGAAGAACAACAAACATGCTTGACTTAATCCAATGCTTTCTGCCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| CDS-3UTR GCA 90 bp | AATTACCCTGGACCATTGGAGCTTTCAGATCTGAATTACCAACAAAAGAGCATATCTCATATAAATAAATaGACCAGGTCCAAAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: NYPGPLELSDLNYQQKSISHINK*TRSKVQ Trigger: CTGTACTTTGGACCTGGTGCATTTATTTATATGAGA...TATGCTCTTTTGTTGGTAATTCAGATCTGAAAGCTCCAATGGTCCAGGGTAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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| 3UTR CAA 72 bp | AATATTCTCATGGCCAAATATGCCATGATAGTTCCATaGCTTGGTTCCTTTTCTAAACACAAGTTGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: NILMAKYAMIVP*LGSFSKHKLLS Trigger: AGATAACAACTTGTGTTTAGAAAAGGAACCAAGCAATGGAACTATCATGGCATATTTGGCCATGAGAATATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216383.2 |
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