Pregenerated sensors for OLFR1269 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000084336Ensembl transcript IDs: ENSMUST00000099756.5, ENSMUST00000214404.2, ENSMUST00000216493.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGCCCTTGGTTCTGTGAAGGTTCTATGGCCCAGTATAGGGGAATaGCAGGGCCAGGAAGCAGGAGTGGGTAGGTTGGGGAACAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: EALGSVKVLWPSIGE*QGQEAGVGRLGNRR Trigger: CCTCCTGTTCCCCAACCTACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTATACTGGGCCATAGAACCTTCACAGAACCAAGGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR CCA 90 bp | CAGTCATCAATGGGAGGAGAGGCCCTTGGTTCTGTGAAGGTTCTATaGCCCAGTATAGGGGAATGCCAGGGCCAGGAAGCAGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: QSSMGGEALGSVKVL*PSIGECQGQEAGVG Trigger: ACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTATACTGGGCCATAGAACCTTCACAGAACCAAGGGCCTCTCCTCCCATTGATGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR GCA 90 bp | AACCACCACTCAAAGAAAACACATGGTGGAACTCATGGCTCTAGCTaGATATATAGCAAAGGATGGCCTAGTCAGTCATCAATGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: NHHSKKTHGGTHGSS*IYSKGWPSQSSMGG Trigger: TCCTCCCATTGATGACTGACTAGGCCATCCTTTGCTATATATGCAGCTAGAGCCATGAGTTCCACCATGTGTTTTCTTTGAGTGGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR CCA 90 bp | AAAGTGCTTGGAAGGAATTGTGTAAGTACACCAAGGCTGATAGAATaGGATGGAGAACTACAACCAAAGCTTGAATTTTTCTTGTCTCTA | + |
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Preference number: 1 (lower is better) Translates to: KVLGRNCVSTPRLIE*DGELQPKLEFFLSL Trigger: TAGAGACAAGAAAAATTCAAGCTTTGGTTGTAGTTCTCCATCCCATTCTATCAGCCTTGGTGTACTTACACAATTCCTTCCAAGCACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTATCCCCAGAGCTCCCTGGGAATAAACCACCACTCAAAGAAAACACATGGCAGGAGTGGGTAGGTTaGGGAACAGGAGGAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: PVSPELPGNKPPLKENTWQEWVG*GTGGEG Trigger: CCCCTCTCCTCCTGTTCCCCAACCTACCCACTCCTG...CCATGTGTTTTCTTTGAGTGGTGGTTTATTCCCAGGGAGCTCTGGGGATACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCATCACCTCCTCCATCAGCACAGGAGTGGGTAGGTTaGGGAACAGGAGGAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: VLRIINQRPDVASPPPSAQEWVG*GTGGEG Trigger: CCCCTCTCCTCCTGTTCCCCAACCTACCCACTCCTG...TGCTGATGGAGGAGGTGATGCCACATCTGGCCTTTGGTTTATAATTCTCAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCATAGTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCATCACCTCCTCCGCCAGGAAGCAGGAGTaGGTAGGTTGGGGAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: LHSSENYKPKARCGITSSARKQE*VGWGTG Trigger: TCCTGTTCCCCAACCTACCCACTCCTGCTTCCTGGC...GGAGGAGGTGATGCCACATCTGGCCTTTGGTTTATAATTCTCAGAACTATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCCATTGGACAGAGCACAGGATCTCCAGTGAAGGAGCTAGAGAAAGTATCCCCAAGGCTGATAGAATaGGATGGAGAACTACAACCA | + |
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Preference number: 2 (lower is better) Translates to: PSIGQSTGSPVKELEKVSPRLIE*DGELQP Trigger: TGGTTGTAGTTCTCCATCCCATTCTATCAGCCTTGG...GGATACTTTCTCTAGCTCCTTCACTGGAGATCCTGTGCTCTGTCCAATGGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CCA 90 bp | AGCGAGGTTCAATCACAAAAGAACACACATGATATGCATTCACTGATAAGTGGAGCCAGGAAGCAGGAGTaGGTAGGTTGGGGAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: SEVQSQKNTHDMHSLISGARKQE*VGWGTG Trigger: TCCTGTTCCCCAACCTACCCACTCCTGCTTCCTGGC...TCCACTTATCAGTGAATGCATATCATGTGTGTTCTTTTGTGATTGAACCTCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCATAGTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCATCACCTCCTCCGAGAGGCTCTGCCAGTaGCTGACAAATACACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LHSSENYKPKARCGITSSERLCQ*LTNTQV Trigger: TACTTGTGTATTTGTCAGGCACTGGCAGAGCCTCTC...GGAGGAGGTGATGCCACATCTGGCCTTTGGTTTATAATTCTCAGAACTATGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR TCA 90 bp | AGCGAGGTTCAATCACAAAAGAACACACATGATATGCATTCACTGATAAGTGGACAGAGACTGAAGGAATaGCCATCCAGAGACTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SEVQSQKNTHDMHSLISGQRLKE*PSRDCP Trigger: GGGACAGTCTCTGGATGGTCATTCCTTCAGTCTCTG...TCCACTTATCAGTGAATGCATATCATGTGTGTTCTTTTGTGATTGAACCTCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCATCACCTCCTCCATCAGCAACTCATGGCTCTAGCTaGATATATAGCAAAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: VLRIINQRPDVASPPPSATHGSS*IYSKGW Trigger: CCATCCTTTGCTATATATGCAGCTAGAGCCATGAGT...TGCTGATGGAGGAGGTGATGCCACATCTGGCCTTTGGTTTATAATTCTCAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTATCCCCAGAGCTCCCTGGGAATAAACCACCACTCAAAGAAAACACATGGATATATAGCAAAGGATaGCCTAGTCAGTCATCAATG | + |
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Preference number: 2 (lower is better) Translates to: PVSPELPGNKPPLKENTWIYSKG*PSQSSM Trigger: CATTGATGACTGACTAGGCCATCCTTTGCTATATAT...CCATGTGTTTTCTTTGAGTGGTGGTTTATTCCCAGGGAGCTCTGGGGATACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGGAAGACCAAAGTGTGGATACTTCAATCCTTCTTAGAAGGGGGAACAAATTCACAGCCATCCATTaGACAGAGCACAGGATCTCC | + |
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Preference number: 2 (lower is better) Translates to: KKEDQSVDTSILLRRGNKFTAIH*TEHRIS Trigger: GGAGATCCTGTGCTCTGTCCAATGGATGGCTGTGAA...TTTGTTCCCCCTTCTAAGAAGGATTGAAGTATCCACACTTTGGTCTTCCTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR TCA 90 bp | TATGATCTACTTCTTCATAGTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCAGGCCCTTGGTTCTGTaGAGGTTCTATGGCCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: YDLLLHSSENYKPKARCGRPLVL*RFYGPV Trigger: TACTGGGCCATAGAACCTTCACAGAACCAAGGGCCT...GCCACATCTGGCCTTTGGTTTATAATTCTCAGAACTATGAAGAAGTAGATCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR TCA 90 bp | AGCGAGGTTCAATCACAAAAGAACACACATGATATGCATTCACTGATAAGTGGAGTTTGGAGCAGAGACTaGAGGAATGACCATCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SEVQSQKNTHDMHSLISGVWSRD*RNDHPE Trigger: CTCTGGATGGTCATTCCTTCAGTCTCTGCTCCAAAC...TCCACTTATCAGTGAATGCATATCATGTGTGTTCTTTTGTGATTGAACCTCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCATAGTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCATCACCTCCTCCATTGCTGTATGTCTCTaGAGTACAGCATATGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LHSSENYKPKARCGITSSIAVCL*STAYEE Trigger: CTCCTCATATGCTGTACTGCAGAGACATACAGCAAT...GGAGGAGGTGATGCCACATCTGGCCTTTGGTTTATAATTCTCAGAACTATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGATCAATTTACAACATGCACCTCCTATGATCTACTTCTTCATAGTTCTGAGGGAGCTGAAGGGGTTTaGAGCCCAATAGGAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: EDQFTTCTSYDLLLHSSEGAEGV*SPIGRT Trigger: TGTTCTTCCTATTGGGCTGCAAACCCCTTCAGCTCC...CTCAGAACTATGAAGAAGTAGATCATAGGAGGTGCATGTTGTAAATTGATCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CCA 90 bp | GACCTACCCACCTACAATGTGAAAAGCAGAAGATCAATTTACAACATGCACCTCGCTGATAGAATGGGATaGAGAACTACAACCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: DLPTYNVKSRRSIYNMHLADRMG*RTTTKA Trigger: AGCTTTGGTTGTAGTTCTCCATCCCATTCTATCAGC...GAGGTGCATGTTGTAAATTGATCTTCTGCTTTTCACATTGTAGGTGGGTAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCATAGTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCATCACCTCCTCCACAGGCAGCATTTCTTaGCTTCCCAATAAAATATCA | + |
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Preference number: 2 (lower is better) Translates to: LHSSENYKPKARCGITSSTGSIS*LPNKIS Trigger: TGATATTTTATTGGGAAGTCAAGAAATGCTGCCTGT...GGAGGAGGTGATGCCACATCTGGCCTTTGGTTTATAATTCTCAGAACTATGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR TCA 90 bp | AGCGAGGTTCAATCACAAAAGAACACACATGATATGCATTCACTGATAAGTGGAGGAAGAACAACAATATaGACTAACCAGTATCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SEVQSQKNTHDMHSLISGGRTTI*TNQYPQ Trigger: CTGGGGATACTGGTTAGTTCATATTGTTGTTCTTCC...TCCACTTATCAGTGAATGCATATCATGTGTGTTCTTTTGTGATTGAACCTCGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCATAGTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCATCACCTCCTCCACCCAAGATTCAATTTaGAAACCTCATGAAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: LHSSENYKPKARCGITSSTQDSI*KPHETQ Trigger: TTGAGTTTCATGAGGTTTGCAAATTGAATCTTGGGT...GGAGGAGGTGATGCCACATCTGGCCTTTGGTTTATAATTCTCAGAACTATGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGATAGTAAATTTTTGGAGAGGAAACTAGGAGAGGGGATAACATTTGAAATGCAGTGCCCATTAGTTTaGACTCAGCAGCATTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: EDSKFLERKLGEGITFEMQCPLV*TQQHSN Trigger: ATTGGAATGCTGCTGAGTCCAAACTAATGGGCACTG...CATTTCAAATGTTATCCCCTCTCCTAGTTTCCTCTCCAAAAATTTACTATCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGATCAATTTACAACATGCACCTCCTATGATCTACTTCTTCATAGTTCTGAGACTCATGGCTCTAGCTaGATATATAGCAAAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: EDQFTTCTSYDLLLHSSETHGSS*IYSKGW Trigger: CCATCCTTTGCTATATATGCAGCTAGAGCCATGAGT...CTCAGAACTATGAAGAAGTAGATCATAGGAGGTGCATGTTGTAAATTGATCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR TCA 72 bp | AGAGCTTGCTGGCAGGAGCCTGATGTAGCTGTCTCCTaGGAGGCTCTGCCAGTGCCTGACAAATACACAAGT | + |
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Preference number: 3 (lower is better) Translates to: RACWQEPDVAVS*EALPVPDKYTS Trigger: ACTTGTGTATTTGTCAGGCACTGGCAGAGCCTCTCAGGAGACAGCTACATCAGGCTCCTGCCAGCAAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR TCA 72 bp | GGAAGAAGTTACAGAGACAAAGTTTGGAGCAGAGACTaGAGGAATGACCATCCAGAGACTGTCCCACCTGGG | + |
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Preference number: 3 (lower is better) Translates to: GRSYRDKVWSRD*RNDHPETVPPG Trigger: CCCAGGTGGGACAGTCTCTGGATGGTCATTCCTTCAGTCTCTGCTCCAAACTTTGTCTCTGTAACTTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR CCA 72 bp | GGAACTCATGGCTCTAGCTGCATATATAGCAAAGGATaGCCTAGTCAGTCATCAATGGGAGGAGAGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: GTHGSSCIYSKG*PSQSSMGGEAL Trigger: AAGGGCCTCTCCTCCCATTGATGACTGACTAGGCCATCCTTTGCTATATATGCAGCTAGAGCCATGAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCATCACCTCCTCCATCAGCAGTTCACAGCCATCCATaGGACAGAGCACAGGATCTC | + |
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Preference number: 3 (lower is better) Translates to: VLRIINQRPDVASPPPSAVHSHP*DRAQDL Trigger: GAGATCCTGTGCTCTGTCCAATGGATGGCTGTGAAC...TGCTGATGGAGGAGGTGATGCCACATCTGGCCTTTGGTTTATAATTCTCAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CAA 90 bp | CCATCCATTGGACAGAGCACAGGATCTCCAGTGAAGGAGCTAGAGAAAGTATCCAGTGCTTGGAAGGAATaGTGTAAGTACACCAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: PSIGQSTGSPVKELEKVSSAWKE*CKYTKA Trigger: AGCCTTGGTGTACTTACACAATTCCTTCCAAGCACT...GGATACTTTCTCTAGCTCCTTCACTGGAGATCCTGTGCTCTGTCCAATGGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR TCA 72 bp | GAAGGGGTTTGCAGCCCAATAGGAAGAACAACAATATaGACTAACCAGTATCCCCAGAGCTCCCTGGGAATA | + |
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Preference number: 3 (lower is better) Translates to: EGVCSPIGRTTI*TNQYPQSSLGI Trigger: TATTCCCAGGGAGCTCTGGGGATACTGGTTAGTTCATATTGTTGTTCTTCCTATTGGGCTGCAAACCCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR TCA 72 bp | TTACAGAGACAAAGTTTGGAGCAGAGACTGAAGGAATaGCCATCCAGAGACTGTCCCACCTGGGTATCCATT | + |
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Preference number: 3 (lower is better) Translates to: LQRQSLEQRLKE*PSRDCPTWVSI Trigger: AATGGATACCCAGGTGGGACAGTCTCTGGATGGTCATTCCTTCAGTCTCTGCTCCAAACTTTGTCTCTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CAA 90 bp | CCATCCATTGGACAGAGCACAGGATCTCCAGTGAAGGAGCTAGAGAAAGTATCCGAGGATAGTAAATTTTaGGAGAGGAAACTAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: PSIGQSTGSPVKELEKVSEDSKF*ERKLGE Trigger: CTCTCCTAGTTTCCTCTCCAAAAATTTACTATCCTC...GGATACTTTCTCTAGCTCCTTCACTGGAGATCCTGTGCTCTGTCCAATGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CAA 90 bp | CCATCCATTGGACAGAGCACAGGATCTCCAGTGAAGGAGCTAGAGAAAGTATCCAAGCTTGAATTTTTCTaGTCTCTACACACAGGTACA | + |
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Preference number: 3 (lower is better) Translates to: PSIGQSTGSPVKELEKVSKLEFF*SLHTGT Trigger: TGTACCTGTGTGTAGAGACAAGAAAAATTCAAGCTT...GGATACTTTCTCTAGCTCCTTCACTGGAGATCCTGTGCTCTGTCCAATGGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR TCA 72 bp | GCATCACCTCCTCCATCAGCATTCCACCACACTGCATaGAAACTAAAATTTGATTTCCAAAGCAACAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: ASPPPSAFHHTA*KLKFDFQSNRK Trigger: TTTCCTGTTGCTTTGGAAATCAAATTTTAGTTTTCATGCAGTGTGGTGGAATGCTGATGGAGGAGGTGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CAA 90 bp | GACCTACCCACCTACAATGTGAAAAGCAGAAGATCAATTTACAACATGCACCTCAGCACAATAATGGTATaGCTGTATGTCTCTGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: DLPTYNVKSRRSIYNMHLSTIMV*LYVSAV Trigger: TACTGCAGAGACATACAGCAATACCATTATTGTGCT...GAGGTGCATGTTGTAAATTGATCTTCTGCTTTTCACATTGTAGGTGGGTAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CAA 90 bp | GACCTACCCACCTACAATGTGAAAAGCAGAAGATCAATTTACAACATGCACCTCGAGGATAGTAAATTTTaGGAGAGGAAACTAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: DLPTYNVKSRRSIYNMHLEDSKF*ERKLGE Trigger: CTCTCCTAGTTTCCTCTCCAAAAATTTACTATCCTC...GAGGTGCATGTTGTAAATTGATCTTCTGCTTTTCACATTGTAGGTGGGTAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR TCA 72 bp | CATCCTAAGCGAGGTTCAATCACAAAAGAACACACATaGTATGCATTCACTGATAAGTGGATATTAGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: HPKRGSITKEHT*YAFTDKWILAQ Trigger: CTGGGCTAATATCCACTTATCAGTGAATGCATATCATGTGTGTTCTTTTGTGATTGAACCTCGCTTAGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CAA 90 bp | AAGAAGGAAGACCAAAGTGTGGATACTTCAATCCTTCTTAGAAGGGGGAACAAAATGAGGTTCAATTGCTaGAAAGTAAAAAGGCATCTC | + |
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Preference number: 3 (lower is better) Translates to: KKEDQSVDTSILLRRGNKMRFNC*KVKRHL Trigger: GAGATGCCTTTTTACTTTCAAGCAATTGAACCTCAT...TTTGTTCCCCCTTCTAAGAAGGATTGAAGTATCCACACTTTGGTCTTCCTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CAA 90 bp | TATGATCTACTTCTTCATAGTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCTTACAGAGACAAAGTTaGGAGCAGAGACTGAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: YDLLLHSSENYKPKARCGLQRQS*EQRLKE Trigger: TTCCTTCAGTCTCTGCTCCAAACTTTGTCTCTGTAA...GCCACATCTGGCCTTTGGTTTATAATTCTCAGAACTATGAAGAAGTAGATCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR TCA 72 bp | AGCTCAGAATACCCAAGATTCAATTTGCAAACCTCATaGAACTCAAGAAGAAGGAAGACCAAAGTGTGGATA | + |
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Preference number: 3 (lower is better) Translates to: SSEYPRFNLQTS*NSRRRKTKVWI Trigger: TATCCACACTTTGGTCTTCCTTCTTCTTGAGTTTCATGAGGTTTGCAAATTGAATCTTGGGTATTCTGAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR-3UTR CAA 90 bp | AGCGAGGTTCAATCACAAAAGAACACACATGATATGCATTCACTGATAAGTGGAAAGCTTGAATTTTTCTaGTCTCTACACACAGGTACA | + |
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Preference number: 3 (lower is better) Translates to: SEVQSQKNTHDMHSLISGKLEFF*SLHTGT Trigger: TGTACCTGTGTGTAGAGACAAGAAAAATTCAAGCTT...TCCACTTATCAGTGAATGCATATCATGTGTGTTCTTTTGTGATTGAACCTCGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR TCA 72 bp | TCTACACACAGGTACACACACATGTATACACAATCCTaGGTACTTAATGAGGTTCAATTGCTTGAAAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: STHRYTHMYTQS*VLNEVQLLESK Trigger: TTTACTTTCAAGCAATTGAACCTCATTAAGTACTCAGGATTGTGTATACATGTGTGTGTACCTGTGTGTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | CCAGTATCCCCAGAGCTCCCTGGGAATAAACCACCACTCAAAGAAAACACATGGTCCATGCTGTTCCCATaGGGACTGCACACACACTTT | + |
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Preference number: 4 (lower is better) Translates to: PVSPELPGNKPPLKENTWSMLFP*GLHTHF Trigger: AAAGTGTGTGTGCAGTCCTCATGGGAACAGCATGGA...CCATGTGTTTTCTTTGAGTGGTGGTTTATTCCCAGGGAGCTCTGGGGATACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | CCAGTATCCCCAGAGCTCCCTGGGAATAAACCACCACTCAAAGAAAACACATGGAATGAGGAAGGTGTCTaGGCAGGCAAGTTTAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: PVSPELPGNKPPLKENTWNEEGV*AGKFKH Trigger: GTGCTTAAACTTGCCTGCTCAGACACCTTCCTCATT...CCATGTGTTTTCTTTGAGTGGTGGTTTATTCCCAGGGAGCTCTGGGGATACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | CTTCATAGTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCATCACCTCCTCCACTTTCTGCACCTCTTaGTTGGAAGAGAGCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LHSSENYKPKARCGITSSTFCTS*LEESPR Trigger: TCTGGGGCTCTCTTCCAATCAAGAGGTGCAGAAAGT...GGAGGAGGTGATGCCACATCTGGCCTTTGGTTTATAATTCTCAGAACTATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | AAAGTGCTTGGAAGGAATTGTGTAAGTACACCAAGGCTGATAGAATGGGATGGACAATCAGCAAACCAATaGGGAAGGTGTCTGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KVLGRNCVSTPRLIEWDGQSANQ*GRCLSR Trigger: CCTGCTCAGACACCTTCCTCATTGGTTTGCTGATTG...TCCATCCCATTCTATCAGCCTTGGTGTACTTACACAATTCCTTCCAAGCACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | GACCTACCCACCTACAATGTGAAAAGCAGAAGATCAATTTACAACATGCACCTCCAATCAGCAAACCAATaGGGAAGGTGTCTGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: DLPTYNVKSRRSIYNMHLQSANQ*GRCLSR Trigger: CCTGCTCAGACACCTTCCTCATTGGTTTGCTGATTG...GAGGTGCATGTTGTAAATTGATCTTCTGCTTTTCACATTGTAGGTGGGTAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR GCA 90 bp | GTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCATCACCTCCTCCATCAGCAAGAAAAGCTGTGTCATaGAGCCCCATACAGATATGG | + |
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Preference number: 4 (lower is better) Translates to: VLRIINQRPDVASPPPSARKAVS*SPIQIW Trigger: CCATATCTGTATGGGGCTGCATGACACAGCTTTTCT...TGCTGATGGAGGAGGTGATGCCACATCTGGCCTTTGGTTTATAATTCTCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR CCA 90 bp | AAAGTGCTTGGAAGGAATTGTGTAAGTACACCAAGGCTGATAGAATGGGATGGAGTTTGGGAGCTGTTGTaGAGGAGTAGCAGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KVLGRNCVSTPRLIEWDGVWELL*RSSRSP Trigger: TGGAGATCTGCTACTCCTCCACAACAGCTCCCAAAC...TCCATCCCATTCTATCAGCCTTGGTGTACTTACACAATTCCTTCCAAGCACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| 3UTR CAA 72 bp | ATCCATTCCATAAACAACTACCAATCCCAGACACTATaGCAGATGTCAACAAGAGCTTGCTGGCAGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: IHSINNYQSQTL*QMSTRACWQEP Trigger: AGGCTCCTGCCAGCAAGCTCTTGTTGACATCTGCAATAGTGTCTGGGATTGGTAGTTGTTTATGGAATGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | AAGAAGGAAGACCAAAGTGTGGATACTTCAATCCTTCTTAGAAGGGGGAACAAACTAGGAGATCCAAGATaGGTTTGGGAGCTGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: KKEDQSVDTSILLRRGNKLGDPR*VWELLW Trigger: CCACAACAGCTCCCAAACTCATCTTGGATCTCCTAG...TTTGTTCCCCCTTCTAAGAAGGATTGAAGTATCCACACTTTGGTCTTCCTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | CTTCATAGTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCATCACCTCCTCCACAGTGTTCCCCCATTaGCAACAATCAGCAAACCAA | + |
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Preference number: 4 (lower is better) Translates to: LHSSENYKPKARCGITSSTVFPH*QQSANQ Trigger: TTGGTTTGCTGATTGTTGTCAATGGGGGAACACTGT...GGAGGAGGTGATGCCACATCTGGCCTTTGGTTTATAATTCTCAGAACTATGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | AGCGAGGTTCAATCACAAAAGAACACACATGATATGCATTCACTGATAAGTGGAACTTTCTGCACCTCTTaGTTGGAAGAGAGCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SEVQSQKNTHDMHSLISGTFCTS*LEESPR Trigger: TCTGGGGCTCTCTTCCAATCAAGAGGTGCAGAAAGT...TCCACTTATCAGTGAATGCATATCATGTGTGTTCTTTTGTGATTGAACCTCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | GAAGATCAATTTACAACATGCACCTCCTATGATCTACTTCTTCATAGTTCTGAGCGTCCCTCAGCACTCTaGGTTCTCAGATGGAACAAG | + |
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Preference number: 4 (lower is better) Translates to: EDQFTTCTSYDLLLHSSERPSAL*VLRWNK Trigger: CTTGTTCCATCTGAGAACTCAGAGTGCTGAGGGACG...CTCAGAACTATGAAGAAGTAGATCATAGGAGGTGCATGTTGTAAATTGATCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | GAGGATAGTAAATTTTTGGAGAGGAAACTAGGAGAGGGGATAACATTTGAAATGCGTCCCTCAGCACTCTaGGTTCTCAGATGGAACAAG | + |
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Preference number: 4 (lower is better) Translates to: EDSKFLERKLGEGITFEMRPSAL*VLRWNK Trigger: CTTGTTCCATCTGAGAACTCAGAGTGCTGAGGGACG...CATTTCAAATGTTATCCCCTCTCCTAGTTTCCTCTCCAAAAATTTACTATCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR GCA 90 bp | GACCTACCCACCTACAATGTGAAAAGCAGAAGATCAATTTACAACATGCACCTCAGAAAAGCTGTGTCATaGAGCCCCATACAGATATGG | + |
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Preference number: 4 (lower is better) Translates to: DLPTYNVKSRRSIYNMHLRKAVS*SPIQIW Trigger: CCATATCTGTATGGGGCTGCATGACACAGCTTTTCT...GAGGTGCATGTTGTAAATTGATCTTCTGCTTTTCACATTGTAGGTGGGTAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR CCA 90 bp | CAGCATATGAGGAGTTGTGTCCCATCAAATGATCACATCTCTAGCGATGTTCATTCTGCACCTCTTGATTaGAAGAGAGCCCCAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: QHMRSCVPSNDHISSDVHSAPLD*KRAPEK Trigger: TTTTTCTGGGGCTCTCTTCCAATCAAGAGGTGCAGA...ATGAACATCGCTAGAGATGTGATCATTTGATGGGACACAACTCCTCATATGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR CCA 90 bp | GAACTACAACCAAAGCTTGAATTTTTCTTGTCTCTACACACAGGTACACACACAGTTTGGGAGCTGTTGTaGAGGAGTAGCAGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ELQPKLEFFLSLHTGTHTVWELL*RSSRSP Trigger: TGGAGATCTGCTACTCCTCCACAACAGCTCCCAAAC...TGTGTGTGTACCTGTGTGTAGAGACAAGAAAAATTCAAGCTTTGGTTGTAGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | GAAGATCAATTTACAACATGCACCTCCTATGATCTACTTCTTCATAGTTCTGAGCTAGGAGATCCAAGATaGGTTTGGGAGCTGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: EDQFTTCTSYDLLLHSSELGDPR*VWELLW Trigger: CCACAACAGCTCCCAAACTCATCTTGGATCTCCTAG...CTCAGAACTATGAAGAAGTAGATCATAGGAGGTGCATGTTGTAAATTGATCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | AAAGTGCTTGGAAGGAATTGTGTAAGTACACCAAGGCTGATAGAATGGGATGGATCAGATGGAACAAGATaGCTCCATAGGATGCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: KVLGRNCVSTPRLIEWDGSDGTR*LHRMLR Trigger: TCTTAGCATCCTATGGAGTCATCTTGTTCCATCTGA...TCCATCCCATTCTATCAGCCTTGGTGTACTTACACAATTCCTTCCAAGCACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | CAGCATATGAGGAGTTGTGTCCCATCAAATGATCACATCTCTAGCGATGTTCATAAGATGAGAAGTATTTaGGCAAAGGAATGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: QHMRSCVPSNDHISSDVHKMRSI*AKECTK Trigger: CTTTGTGCATTCCTTTGCTCAAATACTTCTCATCTT...ATGAACATCGCTAGAGATGTGATCATTTGATGGGACACAACTCCTCATATGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | GTCCCATCAAATGATCACATCTCTAGCGATGTTCATTGTGAGAAATTGTATAAAAATGAGGAAGGTGTCTaGGCAGGCAAGTTTAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: VPSNDHISSDVHCEKLYKNEEGV*AGKFKH Trigger: GTGCTTAAACTTGCCTGCTCAGACACCTTCCTCATT...TTTATACAATTTCTCACAATGAACATCGCTAGAGATGTGATCATTTGATGGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | TATGATCTACTTCTTCATAGTTCTGAGAATTATAAACCAAAGGCCAGATGTGGCACAGTGTTCCCCCATTaGCAACAATCAGCAAACCAA | + |
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Preference number: 4 (lower is better) Translates to: YDLLLHSSENYKPKARCGTVFPH*QQSANQ Trigger: TTGGTTTGCTGATTGTTGTCAATGGGGGAACACTGT...GCCACATCTGGCCTTTGGTTTATAATTCTCAGAACTATGAAGAAGTAGATCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | AGCGAGGTTCAATCACAAAAGAACACACATGATATGCATTCACTGATAAGTGGATCAGATGGAACAAGATaGCTCCATAGGATGCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: SEVQSQKNTHDMHSLISGSDGTR*LHRMLR Trigger: TCTTAGCATCCTATGGAGTCATCTTGTTCCATCTGA...TCCACTTATCAGTGAATGCATATCATGTGTGTTCTTTTGTGATTGAACCTCGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR CCA 90 bp | GAAGATCAATTTACAACATGCACCTCCTATGATCTACTTCTTCATAGTTCTGAGTCTGCACCTCTTGATTaGAAGAGAGCCCCAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: EDQFTTCTSYDLLLHSSESAPLD*KRAPEK Trigger: TTTTTCTGGGGCTCTCTTCCAATCAAGAGGTGCAGA...CTCAGAACTATGAAGAAGTAGATCATAGGAGGTGCATGTTGTAAATTGATCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR CCA 90 bp | GAAGATCAATTTACAACATGCACCTCCTATGATCTACTTCTTCATAGTTCTGAGACCATAGACTCTTCATaGCTTTCTTCACTTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: EDQFTTCTSYDLLLHSSETIDSS*LSSLLH Trigger: ATGCAGAAGTGAAGAAAGCCATGAAGAGTCTATGGT...CTCAGAACTATGAAGAAGTAGATCATAGGAGGTGCATGTTGTAAATTGATCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR TCA 90 bp | GTCCCATCAAATGATCACATCTCTAGCGATGTTCATTGTGAGAAATTGTATAAAAAGATGAGAAGTATTTaGGCAAAGGAATGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: VPSNDHISSDVHCEKLYKKMRSI*AKECTK Trigger: CTTTGTGCATTCCTTTGCTCAAATACTTCTCATCTT...TTTATACAATTTCTCACAATGAACATCGCTAGAGATGTGATCATTTGATGGGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR CAA 90 bp | CCATCCATTGGACAGAGCACAGGATCTCCAGTGAAGGAGCTAGAGAAAGTATCCAACTTTCTGCACCTCTaGATTGGAAGAGAGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PSIGQSTGSPVKELEKVSNFLHL*IGREPQ Trigger: CTGGGGCTCTCTTCCAATCAAGAGGTGCAGAAAGTT...GGATACTTTCTCTAGCTCCTTCACTGGAGATCCTGTGCTCTGTCCAATGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR CAA 90 bp | GACCTACCCACCTACAATGTGAAAAGCAGAAGATCAATTTACAACATGCACCTCAGATCCAAGATGAGTTaGGGAGCTGTTGTGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: DLPTYNVKSRRSIYNMHLRSKMS*GAVVEE Trigger: CTCCTCCACAACAGCTCCCAAACTCATCTTGGATCT...GAGGTGCATGTTGTAAATTGATCTTCTGCTTTTCACATTGTAGGTGGGTAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR CAA 90 bp | AGCGAGGTTCAATCACAAAAGAACACACATGATATGCATTCACTGATAAGTGGAAGATCCAAGATGAGTTaGGGAGCTGTTGTGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: SEVQSQKNTHDMHSLISGRSKMS*GAVVEE Trigger: CTCCTCCACAACAGCTCCCAAACTCATCTTGGATCT...TCCACTTATCAGTGAATGCATATCATGTGTGTTCTTTTGTGATTGAACCTCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR CAA 90 bp | GAAGATCAATTTACAACATGCACCTCCTATGATCTACTTCTTCATAGTTCTGAGAACTTTCTGCACCTCTaGATTGGAAGAGAGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: EDQFTTCTSYDLLLHSSENFLHL*IGREPQ Trigger: CTGGGGCTCTCTTCCAATCAAGAGGTGCAGAAAGTT...CTCAGAACTATGAAGAAGTAGATCATAGGAGGTGCATGTTGTAAATTGATCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS-3UTR CAA 90 bp | GAACTACAACCAAAGCTTGAATTTTTCTTGTCTCTACACACAGGTACACACACAGACAGTGTTCCCCCATaGACAACAATCAGCAAACCA | + |
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Preference number: 5 (lower is better) Translates to: ELQPKLEFFLSLHTGTHTDSVPP*TTISKP Trigger: TGGTTTGCTGATTGTTGTCAATGGGGGAACACTGTC...TGTGTGTGTACCTGTGTGTAGAGACAAGAAAAATTCAAGCTTTGGTTGTAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS CAA 72 bp | AGGACCACAAAGCTGATCACCGACAGTGTTCCCCCATaGACAACAATCAGCAAACCAATGAGGAAGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RTTKLITDSVPP*TTISKPMRKVS Trigger: AGACACCTTCCTCATTGGTTTGCTGATTGTTGTCAATGGGGGAACACTGTCGGTGATCAGCTTTGTGGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099756.5 ENSMUST00000214404.2 ENSMUST00000216493.2 |
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| CDS GCA 72 bp | TATTTGAGCAAAGGAATGCACAAAGCCTCCTATCCATaGTGTTCCCATGAGGACTGCACACACACTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: YLSKGMHKASYP*CSHEDCTHTLV Trigger: AACCAAAGTGTGTGTGCAGTCCTCATGGGAACAGCATGGATAGGAGGCTTTGTGCATTCCTTTGCTCAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099756.5 ENSMUST00000214404.2 ENSMUST00000216493.2 |
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