Pregenerated sensors for OLFR1265 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059910Ensembl transcript IDs: ENSMUST00000080311.2, ENSMUST00000214855.2
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCATCGGTGGAAAGAGAGGCCCATTAGTTGTGCAAACTTTATATaGCTCAGTACAGGGGAACGACAGGGCCAAGAAGTGGGAATGGGT | + |
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Preference number: 1 (lower is better) Translates to: GHRWKERPISCANFI*LSTGERQGQEVGMG Trigger: ACCCATTCCCACTTCTTGGCCCTGTCGTTCCCCTGTACTGAGGCATATAAAGTTTGCACAACTAATGGGCCTCTCTTTCCACCGATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR TCA 90 bp | TCAGACACACCAGAAGAGGGCATCACATACCATTGTAGGTGGTTGTaGGCCACCATGTGGTTGCTGGGAATTGAACTCAAGACCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SDTPEEGITYHCRWL*ATMWLLGIELKTSG Trigger: TCCAGAGGTCTTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCACCTACAATGGTATGTGATGCCCTCTTCTGGTGTGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR TCA 90 bp | AACTTCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: NFQTLTPLHTLARFC*KDPDIAVSCETMPG Trigger: CCCTGGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR GCA 90 bp | CCTTTAACTCTCAGAGAAACCTCAACATCACAAGTCAGAGCCAGTTaGTTCTCTAGTAATTCCCTTGATCCCTTTTCTAGAATATTTTTC | + |
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Preference number: 1 (lower is better) Translates to: PLTLRETSTSQVRAS*FSSNSLDPFSRIFF Trigger: GAAAAATATTCTAGAAAAGGGATCAAGGGAATTACTAGAGAAGCAACTGGCTCTGACTTGTGATGTTGAGGTTTCTCTGAGAGTTAAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR TCA 90 bp | ATTTATAAGTGTTTTAAGATATTTATCAGCTACAATAATGCTAAATaGGCAGTCCTTTCCCTCAGTGCCCATCAGTTTGGACTCAGCACC | + |
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Preference number: 1 (lower is better) Translates to: IYKCFKIFISYNNAK*AVLSLSAHQFGLST Trigger: GGTGCTGAGTCCAAACTGATGGGCACTGAGGGAAAGGACTGCTCATTTAGCATTATTGTAGCTGATAAATATCTTAAAACACTTATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR GCA 90 bp | AAAGGAGACAAGAAAGGATTACAGAGACAAATTGCATACTTCATCTaGAACTTCTCAATTCTTCGTTTATGTGAGTACACAATAGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: KGDKKGLQRQIAYFI*NFSILRLCEYTIAV Trigger: GACAGCTATTGTGTACTCACATAAACGAAGAATTGAGAAGTTGCAGATGAAGTATGCAATTTGTCTCTGTAATCCTTTCTTGTCTCCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGTTCCTCCCTACCTTCTCTCCCATCCAGATTCAACCATCTTCAGTCTCTCAAGTCCTTTCCCTCAGTaGCCATCAGTTTGGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: PVPPYLLSHPDSTIFSLSSPFPQ*PSVWTQ Trigger: CTGAGTCCAAACTGATGGGCACTGAGGGAAAGGACT...TGAGAGACTGAAGATGGTTGAATCTGGATGGGAGAGAAGGTAGGGAGGAACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR CCA 90 bp | GATAAGCATGCAGAAAAGAGCAACACCATCTGCATACTAGAAAGTGAGACATGCGACAGGGCCAAGAAGTaGGAATGGGTGGGTGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: DKHAEKSNTICILESETCDRAKK*EWVGGG Trigger: TCCCCCACCCACCCATTCCCACTTCTTGGCCCTGTC...GCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTTTTCTGCATGCTTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR CCA 90 bp | GATAAGCATGCAGAAAAGAGCAACACCATCTGCATACTAGAAAGTGAGACATGCGCCAAGAAGTGGGAATaGGTGGGTGGGGGAATGGGT | + |
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Preference number: 2 (lower is better) Translates to: DKHAEKSNTICILESETCAKKWE*VGGGMG Trigger: ACCCATTCCCCCACCCACCCATTCCCACTTCTTGGC...GCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTTTTCTGCATGCTTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGTTCCTCCCTACCTTCTCTCCCATCCAGATTCAACCATCTTCAGTCTCTCACAAGTCAGAGCCAGTTaGTTCTCTAGTAATTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: PVPPYLLSHPDSTIFSLSQVRAS*FSSNSL Trigger: AAGGGAATTACTAGAGAAGCAACTGGCTCTGACTTG...TGAGAGACTGAAGATGGTTGAATCTGGATGGGAGAGAAGGTAGGGAGGAACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTTCCTCCCTACCTTCTCTCCCATCCAGATTCAACCATCTTCAGTCTCTCACATTTGGAGAAGAGGTaGTTAAGAAGGTGCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: PVPPYLLSHPDSTIFSLSHLEKR*LRRCLF Trigger: AAACAAGCACCTTCTTAACCACCTCTTCTCCAAATG...TGAGAGACTGAAGATGGTTGAATCTGGATGGGAGAGAAGGTAGGGAGGAACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR GCA 90 bp | GATAAGCATGCAGAAAAGAGCAACACCATCTGCATACTAGAAAGTGAGACATGCTCTCTTGTGAGACTATaGCAGGGCCTAGCAAACACA | + |
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Preference number: 2 (lower is better) Translates to: DKHAEKSNTICILESETCSLVRL*QGLANT Trigger: TGTGTTTGCTAGGCCCTGGCATAGTCTCACAAGAGA...GCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTTTTCTGCATGCTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTTCCTCCCTACCTTCTCTCCCATCCAGATTCAACCATCTTCAGTCTCTCATTTGCTACAGTATTATaGATAGTGGTAAGGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: PVPPYLLSHPDSTIFSLSFATVL*IVVRMQ Trigger: TTGCATCCTTACCACTATCCATAATACTGTAGCAAA...TGAGAGACTGAAGATGGTTGAATCTGGATGGGAGAGAAGGTAGGGAGGAACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR TCA 90 bp | GATAAGCATGCAGAAAAGAGCAACACCATCTGCATACTAGAAAGTGAGACATGCTACAATAATGCTAAATaGGCAGTCCTTTCCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: DKHAEKSNTICILESETCYNNAK*AVLSLS Trigger: ACTGAGGGAAAGGACTGCTCATTTAGCATTATTGTA...GCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTTTTCTGCATGCTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR CAA 90 bp | CCTCAACATCACAAGTCAGAGCCAGTTGCTTCTCTAGTAATTCCCTaGATCCCTTTTCTAGAATATTTTTCTACCAGAATAGTATTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PQHHKSEPVASLVIP*IPFLEYFSTRIVLE Trigger: CTCCAATACTATTCTGGTAGAAAAATATTCTAGAAAAGGGATCAAGGGAATTACTAGAGAAGCAACTGGCTCTGACTTGTGATGTTGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR GCA 90 bp | GATAAGCATGCAGAAAAGAGCAACACCATCTGCATACTAGAAAGTGAGACATGCTTAAACCAAAATAAGTaGGGTCTAATATTCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: DKHAEKSNTICILESETCLNQNK*GLIFCG Trigger: GCCACAGAATATTAGACCGCACTTATTTTGGTTTAA...GCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTTTTCTGCATGCTTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR CAA 90 bp | AGGATGCTTCCATCAAAGGAGACAAGAAAGGATTACAGAGACAAATaGCATACTTCATCTGCAACTTCTCAATTCTTCGTTTATGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: RMLPSKETRKDYRDK*HTSSATSQFFVYVS Trigger: ACTCACATAAACGAAGAATTGAGAAGTTGCAGATGAAGTATGCAATTTGTCTCTGTAATCCTTTCTTGTCTCCTTTGATGGAAGCATCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR TCA 72 bp | CCAGAAGAGGGCATCACATACCATTGTAGGTGGTTGTaGGCCACCATGTGGTTGCTGGGAATTGAACTCAAG | + |
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Preference number: 3 (lower is better) Translates to: PEEGITYHCRWL*ATMWLLGIELK Trigger: CTTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCACCTACAATGGTATGTGATGCCCTCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR GCA 72 bp | CATACCATTGTAGGTGGTTGTGAGCCACCATGTGGTTaGTGGGAATTGAACTCAAGACCTCTGGAAGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: HTIVGGCEPPCG*WELNSRPLEEH Trigger: GTGCTCTTCCAGAGGTCTTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCACCTACAATGGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTAGTTGTGCAAACTTTATATaGCTCAGTACAGGGGAACGACAGGGCCAAGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: WKERPISCANFI*LSTGERQGQEV Trigger: CACTTCTTGGCCCTGTCGTTCCCCTGTACTGAGGCATATAAAGTTTGCACAACTAATGGGCCTCTCTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR CCA 72 bp | GGCAAACCAACATTTAGGGAGTTCCACTCTTCCATCTaGAGAGAGCTGATCCAGGAGCACATATCTCGCTTA | + |
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Preference number: 3 (lower is better) Translates to: GKPTFREFHSSI*RELIQEHISRL Trigger: TAAGCGAGATATGTGCTCCTGGATCAGCTCTCTCCAGATGGAAGAGTGGAACTCCCTAAATGTTGGTTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGTTCCTCCCTACCTTCTCTCCCATCCAGATTCAACCATCTTCAGTCTCTCAGCCAAAATAAATAAATaGCTGAGGACCAGCCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: PVPPYLLSHPDSTIFSLSAKINK*LRTSLS Trigger: ACTGAGGCTGGTCCTCAGCAATTTATTTATTTTGGC...TGAGAGACTGAAGATGGTTGAATCTGGATGGGAGAGAAGGTAGGGAGGAACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGTTCCTCCCTACCTTCTCTCCCATCCAGATTCAACCATCTTCAGTCTCTCAATCCTTAGGAGTACTTaGAAGGGGAGACAATTCTTC | + |
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Preference number: 3 (lower is better) Translates to: PVPPYLLSHPDSTIFSLSILRST*KGRQFF Trigger: GAAGAATTGTCTCCCCTTCAAAGTACTCCTAAGGAT...TGAGAGACTGAAGATGGTTGAATCTGGATGGGAGAGAAGGTAGGGAGGAACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR-3UTR CAA 90 bp | GATAAGCATGCAGAAAAGAGCAACACCATCTGCATACTAGAAAGTGAGACATGCTCAGTGCCCATCAGTTaGGACTCAGCACCATTCCAA | + |
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Preference number: 3 (lower is better) Translates to: DKHAEKSNTICILESETCSVPIS*DSAPFQ Trigger: TTGGAATGGTGCTGAGTCCAAACTGATGGGCACTGA...GCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTTTTCTGCATGCTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR CCA 72 bp | TTTACATGCATTCATTCTGAGGCTGACGTCCTTAAGTaGGAACCTAAAGGGAGCACTGGGAATACAGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: FTCIHSEADVLK*EPKGSTGNTVD Trigger: GTCAACTGTATTCCCAGTGCTCCCTTTAGGTTCCCACTTAAGGACGTCAGCCTCAGAATGAATGCATGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR TCA 72 bp | ACGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: TLTPLHTLARFC*KDPDIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR GCA 72 bp | AAGAGCAACACCATCTGCATACTAGAAAGTGAGACATaGATTACTCAGGTTGATGGTGCTCCTGTAGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: KSNTICILESET*ITQVDGAPVGK Trigger: TTTGCCTACAGGAGCACCATCAACCTGAGTAATGCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR GCA 72 bp | CTCAGAGAAACCTCAACATCACAAGTCAGAGCCAGTTaGTTCTCTAGTAATTCCCTTGATCCCTTTTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: LRETSTSQVRAS*FSSNSLDPFSR Trigger: TCTAGAAAAGGGATCAAGGGAATTACTAGAGAAGCAACTGGCTCTGACTTGTGATGTTGAGGTTTCTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR TCA 72 bp | TGTTTTAAGATATTTATCAGCTACAATAATGCTAAATaGGCAGTCCTTTCCCTCAGTGCCCATCAGTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: CFKIFISYNNAK*AVLSLSAHQFG Trigger: TCCAAACTGATGGGCACTGAGGGAAAGGACTGCTCATTTAGCATTATTGTAGCTGATAAATATCTTAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR CCA 72 bp | TTTATATGGTACCAGTTATCCTCTAGTGGTCTAACATaGAGTTTTAGGGATGTGGTCTTACATATGCATACT | + |
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Preference number: 3 (lower is better) Translates to: FIWYQLSSSGLT*SFRDVVLHMHT Trigger: AGTATGCATATGTAAGACCACATCCCTAAAACTCCATGTTAGACCACTAGAGGATAACTGGTACCATATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR TCA 72 bp | TCCTTGGAAACTGTAATACAAGCTGAGTTTCACTGTTaGTTCCTCTGGTATATAAGATGGTATGTAAGATGT | + |
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Preference number: 3 (lower is better) Translates to: SLETVIQAEFHC*FLWYIRWYVRC Trigger: ACATCTTACATACCATCTTATATACCAGAGGAATCAACAGTGAAACTCAGCTTGTATTACAGTTTCCAAGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR GCA 72 bp | AAGAAAGGATTACAGAGACAAATTGCATACTTCATCTaGAACTTCTCAATTCTTCGTTTATGTGAGTACACA | + |
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Preference number: 3 (lower is better) Translates to: KKGLQRQIAYFI*NFSILRLCEYT Trigger: TGTGTACTCACATAAACGAAGAATTGAGAAGTTGCAGATGAAGTATGCAATTTGTCTCTGTAATCCTTTCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS-3UTR TCA 90 bp | CCAGTTCCTCCCTACCTTCTCTCCCATCCAGATTCAACCATCTTCAGTCTCTCAAGGGCAAAGGAAAGATaGGAAGTATTTGGGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: PVPPYLLSHPDSTIFSLSRAKER*EVFGQR Trigger: CCTTTGCCCAAATACTTCTCATCTTTCCTTTGCCCT...TGAGAGACTGAAGATGGTTGAATCTGGATGGGAGAGAAGGTAGGGAGGAACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR CAA 72 bp | GCTGACAGGTCACTCATTGCTGTTCTGAAGATGAACTaGGATACAGCTTTCAGGTCCTCTCTTTCTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ADRSLIAVLKMN*DTAFRSSLSLS Trigger: AGAGAGAGAAAGAGAGGACCTGAAAGCTGTATCCAAGTTCATCTTCAGAACAGCAATGAGTGACCTGTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS-3UTR GCA 90 bp | GATAAGCATGCAGAAAAGAGCAACACCATCTGCATACTAGAAAGTGAGACATGCGCGCCACCAAAGAAGTaGATGAAGAAAAGCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: DKHAEKSNTICILESETCAPPKK*MKKSCV Trigger: GACACAGCTTTTCTTCATGCACTTCTTTGGTGGCGC...GCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTTTTCTGCATGCTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS-3UTR TCA 90 bp | GATAAGCATGCAGAAAAGAGCAACACCATCTGCATACTAGAAAGTGAGACATGCTTAGATGGAACAAGATaGCCACATAGGATGCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: DKHAEKSNTICILESETCLDGTR*PHRMLR Trigger: TCTTAGCATCCTATGTGGTCATCTTGTTCCATCTAA...GCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTTTTCTGCATGCTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS-3UTR GCA 90 bp | GATAAGCATGCAGAAAAGAGCAACACCATCTGCATACTAGAAAGTGAGACATGCGGTTTTCTTCACTTTTaGATTTCTCAGGGAGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: DKHAEKSNTICILESETCGFLHF*ISQGVD Trigger: ATCTACTCCCTGAGAAATGCAAAAGTGAAGAAAACC...GCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTTTTCTGCATGCTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS-3UTR CCA 90 bp | GTGGCAAATATTTGCTACAGTATTATGGATAGTGGTAAGGATGCAAACAATCTAGTTTTGGAGCTGTTGTaGAGGAGTAGCAGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VANICYSIMDSGKDANNLVLELL*RSSRSP Trigger: TGGAGATCTGCTACTCCTCCACAACAGCTCCAAAAC...TAGATTGTTTGCATCCTTACCACTATCCATAATACTGTAGCAAATATTTGCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| 3UTR CAA 72 bp | TCCAGCCCTGTAACTTCTCAATTCTTGGTACATCCTTaGGCAGTTTATAGTAGTACCAAACAGGTGAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SSPVTSQFLVHP*AVYSSTKQVSF Trigger: AAAACTCACCTGTTTGGTACTACTATAAACTGCCAAAGGATGTACCAAGAATTGAGAAGTTACAGGGCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS-3UTR TCA 90 bp | GTGGCAAATATTTGCTACAGTATTATGGATAGTGGTAAGGATGCAAACAATCTAAATAAGGAAGGTGTCTaGGCAGGCAAGTTTAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: VANICYSIMDSGKDANNLNKEGV*AGKFKQ Trigger: TTGCTTAAACTTGCCTGCTCAGACACCTTCCTTATT...TAGATTGTTTGCATCCTTACCACTATCCATAATACTGTAGCAAATATTTGCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS-3UTR GCA 90 bp | GTGGCAAATATTTGCTACAGTATTATGGATAGTGGTAAGGATGCAAACAATCTAATTTGGGCAAAGGAATaGACAAAGCCTCCTATCCAT | + |
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Preference number: 4 (lower is better) Translates to: VANICYSIMDSGKDANNLIWAKE*TKPPIH Trigger: ATGGATAGGAGGCTTTGTGCATTCCTTTGCCCAAAT...TAGATTGTTTGCATCCTTACCACTATCCATAATACTGTAGCAAATATTTGCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS-3UTR CCA 90 bp | GTGGCAAATATTTGCTACAGTATTATGGATAGTGGTAAGGATGCAAACAATCTAAAGATGAGAAGTATTTaGGCAAAGGAATGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: VANICYSIMDSGKDANNLKMRSI*AKECTK Trigger: CTTTGTGCATTCCTTTGCCCAAATACTTCTCATCTT...TAGATTGTTTGCATCCTTACCACTATCCATAATACTGTAGCAAATATTTGCCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS-3UTR CCA 90 bp | GTGGCAAATATTTGCTACAGTATTATGGATAGTGGTAAGGATGCAAACAATCTAACCATAGACTCTTCATaGTTTTCTTCACTTTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: VANICYSIMDSGKDANNLTIDSS*FSSLLH Trigger: ATGCAAAAGTGAAGAAAACCATGAAGAGTCTATGGT...TAGATTGTTTGCATCCTTACCACTATCCATAATACTGTAGCAAATATTTGCCAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS GCA 90 bp | GATGAGAAGTATTTGGGCAAAGGAATGCACAAAGCCTCCTATCCATaGTGTTCCTACGAGGACTGCACACACATTTCGGTTCATAATGCT | + |
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Preference number: 5 (lower is better) Translates to: DEKYLGKGMHKASYP*CSYEDCTHISVHNA Trigger: AGCATTATGAACCGAAATGTGTGTGCAGTCCTCGTAGGAACAGCATGGATAGGAGGCTTTGTGCATTCCTTTGCCCAAATACTTCTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080311.2 ENSMUST00000214855.2 |
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| CDS-3UTR CAA 90 bp | GATAAGCATGCAGAAAAGAGCAACACCATCTGCATACTAGAAAGTGAGACATGCTGGTTTTCTTCACTTTaGCATTTCTCAGGGAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: DKHAEKSNTICILESETCWFSSL*HFSGSR Trigger: TCTACTCCCTGAGAAATGCAAAAGTGAAGAAAACCA...GCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTTTTCTGCATGCTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS-3UTR CAA 90 bp | GATAAGCATGCAGAAAAGAGCAACACCATCTGCATACTAGAAAGTGAGACATGCAAAGATGAGAAGTATTaGGGCAAAGGAATGCACAAA | + |
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Preference number: 5 (lower is better) Translates to: DKHAEKSNTICILESETCKDEKY*GKGMHK Trigger: TTTGTGCATTCCTTTGCCCAAATACTTCTCATCTTT...GCATGTCTCACTTTCTAGTATGCAGATGGTGTTGCTCTTTTCTGCATGCTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214855.2 |
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| CDS CAA 72 bp | AGGACCACAAAGCTGATCACTGACAGAGTTCCCGCATaGGCAACAATCAGTAGGCCAATAAGGAAGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RTTKLITDRVPA*ATISRPIRKVS Trigger: AGACACCTTCCTTATTGGCCTACTGATTGTTGCCAATGCGGGAACTCTGTCAGTGATCAGCTTTGTGGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080311.2 ENSMUST00000214855.2 |
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| CDS GCA 72 bp | TATTTGGGCAAAGGAATGCACAAAGCCTCCTATCCATaGTGTTCCTACGAGGACTGCACACACATTTCGGTT | + |
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Preference number: 6 (lower is better) Translates to: YLGKGMHKASYP*CSYEDCTHISV Trigger: AACCGAAATGTGTGTGCAGTCCTCGTAGGAACAGCATGGATAGGAGGCTTTGTGCATTCCTTTGCCCAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080311.2 ENSMUST00000214855.2 |
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| CDS GCA 72 bp | GGCAAAGGAAAGATGAGAAGTATTTGGGCAAAGGAATaGACAAAGCCTCCTATCCATGCTGTTCCTACGAGG | + |
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Preference number: 6 (lower is better) Translates to: GKGKMRSIWAKE*TKPPIHAVPTR Trigger: CCTCGTAGGAACAGCATGGATAGGAGGCTTTGTGCATTCCTTTGCCCAAATACTTCTCATCTTTCCTTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080311.2 ENSMUST00000214855.2 |
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