Pregenerated sensors for OLFR1263 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059112Ensembl transcript IDs: ENSMUST00000214382.2, ENSMUST00000217065.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGGTTCATTTTCCAGCACCCATGTGGCAACTCATAGTTGCCTGTaGCTCCCATTCCAGGGGATCCAAACCCTCTTATGTCTCTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: LGSFSSTHVATHSCL*LPFQGIQTLLCLFR Trigger: CCTGAAGAGACATAAGAGGGTTTGGATCCCCTGGAATGGGAGTCACAGGCAACTATGAGTTGCCACATGGGTGCTGGAAAATGAACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR TCA 90 bp | TTAGGAGCATCAGGAGGTTGGAGTGGATCTGAACAGAGTGCATGGTaGATACGATCAGAATATGTTGCATGGTTTTCACTATATCACATT | + |
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Preference number: 1 (lower is better) Translates to: LGASGGWSGSEQSAW*IRSEYVAWFSLYHI Trigger: AATGTGATATAGTGAAAACCATGCAACATATTCTGATCGTATTCACCATGCACTCTGTTCAGATCCACTCCAACCTCCTGATGCTCCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR GCA 90 bp | TGCTCCCAGTTCCAAGAATTTCCTGTGTCTCCAGACATTGCAGTATaGATGTATTCATCCTGTGTGAAGTTAGTTTTTGCAATGATCTAT | + |
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Preference number: 1 (lower is better) Translates to: CSQFQEFPVSPDIAV*MYSSCVKLVFAMIY Trigger: ATAGATCATTGCAAAAACTAACTTCACACAGGATGAATACATGCATACTGCAATGTCTGGAGACACAGGAAATTCTTGGAACTGGGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR TCA 90 bp | ATCTTCTGTCTTAAAACATGGCATTTGATGCTGGAGAGATGGCTTTaGAATTTAAAGCACTTAATGTTCTTTCAAGAGGACCTGGGTTCA | + |
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Preference number: 1 (lower is better) Translates to: IFCLKTWHLMLERWL*NLKHLMFFQEDLGS Trigger: TGAACCCAGGTCCTCTTGAAAGAACATTAAGTGCTTTAAATTTCAAAGCCATCTCTCCAGCATCAAATGCCATGTTTTAAGACAGAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR GCA 90 bp | ACACACACACACACATACATATATACATGTATGTATATATATGTCTaGTCCCAGTTCCAAGAATTTCCTGTGTCTCCAGACATTGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: THTHTYIYTCMYIYV*SQFQEFPVSPDIAV Trigger: TACTGCAATGTCTGGAGACACAGGAAATTCTTGGAACTGGGAGCAGACATATATATACATACATGTATATATGTATGTGTGTGTGTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR TCA 90 bp | GCACCCATGTGGCAACTCATAGTTGCCTGTGACTCCCATTCCAGGGGATCCAAAGCATATAAATCTTTATaGTCCTGGTTCCTTGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: APMWQLIVACDSHSRGSKAYKSL*SWFLAP Trigger: GGGGGCAAGGAACCAGGATCATAAAGATTTATATGC...TTTGGATCCCCTGGAATGGGAGTCACAGGCAACTATGAGTTGCCACATGGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR TCA 90 bp | GCACCCATGTGGCAACTCATAGTTGCCTGTGACTCCCATTCCAGGGGATCCAAATACCGAGATTTATTGTaGCCTCTTCATGCTGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: APMWQLIVACDSHSRGSKYRDLL*PLHAAH Trigger: ATGAGCAGCATGAAGAGGTCACAATAAATCTCGGTA...TTTGGATCCCCTGGAATGGGAGTCACAGGCAACTATGAGTTGCCACATGGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR GCA 90 bp | GCACCCATGTGGCAACTCATAGTTGCCTGTGACTCCCATTCCAGGGGATCCAAACCAGACATTGCAGTATaGATGTATTCATCCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: APMWQLIVACDSHSRGSKPDIAV*MYSSCV Trigger: CACACAGGATGAATACATGCATACTGCAATGTCTGG...TTTGGATCCCCTGGAATGGGAGTCACAGGCAACTATGAGTTGCCACATGGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR GCA 90 bp | GCACCCATGTGGCAACTCATAGTTGCCTGTGACTCCCATTCCAGGGGATCCAAATGTGAAGTTAGTTTTTaGAATGATCTATCCACTCAC | + |
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Preference number: 2 (lower is better) Translates to: APMWQLIVACDSHSRGSKCEVSF*NDLSTH Trigger: GTGAGTGGATAGATCATTGCAAAAACTAACTTCACA...TTTGGATCCCCTGGAATGGGAGTCACAGGCAACTATGAGTTGCCACATGGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTCCAAGAATTTCCTGTGTCTCCAGACATTGCAGTATGCATGTATTCATCCTTACCGAGATTTATTGTaGCCTCTTCATGCTGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: SSKNFLCLQTLQYACIHPYRDLL*PLHAAH Trigger: ATGAGCAGCATGAAGAGGTCACAATAAATCTCGGTA...AGGATGAATACATGCATACTGCAATGTCTGGAGACACAGGAAATTCTTGGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGAAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTGCATATAAATCTTTATaGTCCTGGTTCCTTGCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: CVKLVFAMIYPLTTSMTSAYKSL*SWFLAP Trigger: GGGGGCAAGGAACCAGGATCATAAAGATTTATATGC...AGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTTCACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGAAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTCACCAGGGCAAATACTaGATGTCCTCACTCATATGT | + |
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Preference number: 2 (lower is better) Translates to: CVKLVFAMIYPLTTSMTSHQGKY*MSSLIC Trigger: ACATATGAGTGAGGACATGCAGTATTTGCCCTGGTG...AGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTTCACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR GCA 90 bp | AGTTCCAAGAATTTCCTGTGTCTCCAGACATTGCAGTATGCATGTATTCATCCTATGATCCTGGTTCCTTaGCCCCAAATTCATCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: SSKNFLCLQTLQYACIHPMILVP*PQIHPY Trigger: ATAAGGATGAATTTGGGGGCAAGGAACCAGGATCAT...AGGATGAATACATGCATACTGCAATGTCTGGAGACACAGGAAATTCTTGGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR CCA 90 bp | AAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTTTACTAGGAGCATCAGGAGGTTaGAGTGGATCTGAACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: KLVFAMIYPLTTSMTSLLGASGG*SGSEQS Trigger: ACTCTGTTCAGATCCACTCCAACCTCCTGATGCTCC...TAGTAAAGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR CCA 90 bp | AAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTTTACTAGCAGCTGATGGGAACTaGAGCTTGGTTCATATTAGA | + |
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Preference number: 2 (lower is better) Translates to: KLVFAMIYPLTTSMTSLLAADGN*SLVHIR Trigger: TCTAATATGAACCAAGCTCCAGTTCCCATCAGCTGC...TAGTAAAGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGAAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTATGGGAACTGGAGCTTaGTTCATATTAGATAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: CVKLVFAMIYPLTTSMTSMGTGA*FILDSE Trigger: TTCACTATCTAATATGAACCAAGCTCCAGTTCCCAT...AGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTTCACACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGAAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTCTCATTTCAAATTTATaGATAACACCCTTATGGGCT | + |
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Preference number: 2 (lower is better) Translates to: CVKLVFAMIYPLTTSMTSLISNL*ITPLWA Trigger: AGCCCATAAGGGTGTTATGCATAAATTTGAAATGAG...AGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTTCACACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR CCA 90 bp | GAGTGCATGGTGAATACGATCAGAATATGTTGCATGGTTTTCACTATATCACATGTCCTCACTCATATGTaGAAGTCAAAGCATTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: ECMVNTIRICCMVFTISHVLTHM*KSKHFY Trigger: ATAAAAATGCTTTGACTTCCACATATGAGTGAGGAC...ATGTGATATAGTGAAAACCATGCAACATATTCTGATCGTATTCACCATGCACTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR GCA 90 bp | AAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTTTACTACTCATTTCAAATTTATaGATAACACCCTTATGGGCT | + |
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Preference number: 2 (lower is better) Translates to: KLVFAMIYPLTTSMTSLLLISNL*ITPLWA Trigger: AGCCCATAAGGGTGTTATGCATAAATTTGAAATGAG...TAGTAAAGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR CCA 72 bp | TTCAAGAGGACCTGGGTTCATTTTCCAGCACCCATGTaGCAACTCATAGTTGCCTGTGACTCCCATTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: FKRTWVHFPAPM*QLIVACDSHSR Trigger: CCTGGAATGGGAGTCACAGGCAACTATGAGTTGCCACATGGGTGCTGGAAAATGAACCCAGGTCCTCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR CAA 90 bp | GCACCCATGTGGCAACTCATAGTTGCCTGTGACTCCCATTCCAGGGGATCCAAATATGATCCTGGTTCCTaGCCCCCAAATTCATCCTTA | + |
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Preference number: 3 (lower is better) Translates to: APMWQLIVACDSHSRGSKYDPGS*PPNSSL Trigger: TAAGGATGAATTTGGGGGCAAGGAACCAGGATCATA...TTTGGATCCCCTGGAATGGGAGTCACAGGCAACTATGAGTTGCCACATGGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR TCA 72 bp | TTTTCCAGCACCCATGTGGCAACTCATAGTTGCCTGTaGCTCCCATTCCAGGGGATCCAAACCCTCTTATGT | + |
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Preference number: 3 (lower is better) Translates to: FSSTHVATHSCL*LPFQGIQTLLC Trigger: ACATAAGAGGGTTTGGATCCCCTGGAATGGGAGTCACAGGCAACTATGAGTTGCCACATGGGTGCTGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR TCA 72 bp | CATGAAGTTAGGAGCATCAGGAGGTTGGAGTGGATCTaGACAGAGTGCATGGTGAATACGATCAGAATATGT | + |
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Preference number: 3 (lower is better) Translates to: HEVRSIRRLEWI*TECMVNTIRIC Trigger: ACATATTCTGATCGTATTCACCATGCACTCTGTTCAGATCCACTCCAACCTCCTGATGCTCCTAACTTCATG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR CCA 72 bp | CCACCAGGGCAAATACTGCATGTCCTCACTCATATGTaGAAGTCAAAGCATTTTTATCTCACTGAAGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: PPGQILHVLTHM*KSKHFYLTEAE Trigger: CTCAGCTTCAGTGAGATAAAAATGCTTTGACTTCCACATATGAGTGAGGACATGCAGTATTTGCCCTGGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR TCA 72 bp | TCAGGAGGTTGGAGTGGATCTGAACAGAGTGCATGGTaGATACGATCAGAATATGTTGCATGGTTTTCACTA | + |
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Preference number: 3 (lower is better) Translates to: SGGWSGSEQSAW*IRSEYVAWFSL Trigger: TAGTGAAAACCATGCAACATATTCTGATCGTATTCACCATGCACTCTGTTCAGATCCACTCCAACCTCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR CAA 90 bp | AAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTTTACTACATTTTCTGGGTGCATaGGTAAGTAATGAATACAGT | + |
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Preference number: 3 (lower is better) Translates to: KLVFAMIYPLTTSMTSLLHFLGA*VSNEYS Trigger: ACTGTATTCATTACTTACCAATGCACCCAGAAAATG...TAGTAAAGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR CAA 90 bp | GAGAATAGCCTCATTTCAAATTTATGCATAACACCCTTATGGGCTGAAAAACTTCATTTTCTGGGTGCATaGGTAAGTAATGAATACAGT | + |
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Preference number: 3 (lower is better) Translates to: ENSLISNLCITPLWAEKLHFLGA*VSNEYS Trigger: ACTGTATTCATTACTTACCAATGCACCCAGAAAATG...AAGTTTTTCAGCCCATAAGGGTGTTATGCATAAATTTGAAATGAGGCTATTCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| 3UTR-3UTR CAA 90 bp | AAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTTTACTAATAGACAGCACAAATTaGTCTCAATGTCCTATCCAA | + |
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Preference number: 3 (lower is better) Translates to: KLVFAMIYPLTTSMTSLLIDSTN*SQCPIQ Trigger: TTGGATAGGACATTGAGACAAATTTGTGCTGTCTAT...TAGTAAAGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR TCA 90 bp | GCACCCATGTGGCAACTCATAGTTGCCTGTGACTCCCATTCCAGGGGATCCAAAAGGGGTCCCAGAGTGTaGGTGTCAGTGCAGGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: APMWQLIVACDSHSRGSKRGPRV*VSVQAN Trigger: GTTGGCCTGCACTGACACTCACACTCTGGGACCCCT...TTTGGATCCCCTGGAATGGGAGTCACAGGCAACTATGAGTTGCCACATGGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR CCA 90 bp | GCACCCATGTGGCAACTCATAGTTGCCTGTGACTCCCATTCCAGGGGATCCAAAACAGAAAGAAGTACATaGGAGTGGCCAGGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: APMWQLIVACDSHSRGSKTERST*EWPGLG Trigger: GCCCAGCCCTGGCCACTCCCATGTACTTCTTTCTGT...TTTGGATCCCCTGGAATGGGAGTCACAGGCAACTATGAGTTGCCACATGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR TCA 90 bp | AGTTCCAAGAATTTCCTGTGTCTCCAGACATTGCAGTATGCATGTATTCATCCTAGGGGTCCCAGAGTGTaGGTGTCAGTGCAGGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: SSKNFLCLQTLQYACIHPRGPRV*VSVQAN Trigger: GTTGGCCTGCACTGACACTCACACTCTGGGACCCCT...AGGATGAATACATGCATACTGCAATGTCTGGAGACACAGGAAATTCTTGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR CCA 90 bp | AGTTCCAAGAATTTCCTGTGTCTCCAGACATTGCAGTATGCATGTATTCATCCTACAGAAAGAAGTACATaGGAGTGGCCAGGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SSKNFLCLQTLQYACIHPTERST*EWPGLG Trigger: GCCCAGCCCTGGCCACTCCCATGTACTTCTTTCTGT...AGGATGAATACATGCATACTGCAATGTCTGGAGACACAGGAAATTCTTGGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR CCA 90 bp | AGTTCCAAGAATTTCCTGTGTCTCCAGACATTGCAGTATGCATGTATTCATCCTTGGGGAAGGAGGTCATaGGCCTTAGGTACAGGTATG | + |
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Preference number: 4 (lower is better) Translates to: SSKNFLCLQTLQYACIHPWGRRS*ALGTGM Trigger: CATACCTGTACCTAAGGCCCATGACCTCCTTCCCCA...AGGATGAATACATGCATACTGCAATGTCTGGAGACACAGGAAATTCTTGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGAAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTACAACAACGGTGACATaGGAGGCACAGGTAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: CVKLVFAMIYPLTTSMTSTTTVT*EAQVDR Trigger: CCTGTCTACCTGTGCCTCTCATGTCACCGTTGTTGT...AGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTTCACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR CCA 90 bp | AAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTTTACTAGGGAGTGGCCAGGGCTaGGCTGATGAAAATGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: KLVFAMIYPLTTSMTSLLGSGQG*ADENGD Trigger: GTCACCATTTTCATCAGCCCAGCCCTGGCCACTCCC...TAGTAAAGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR CCA 90 bp | GAGAATAGCCTCATTTCAAATTTATGCATAACACCCTTATGGGCTGAAAAACTTGGGAGTGGCCAGGGCTaGGCTGATGAAAATGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: ENSLISNLCITPLWAEKLGSGQG*ADENGD Trigger: GTCACCATTTTCATCAGCCCAGCCCTGGCCACTCCC...AAGTTTTTCAGCCCATAAGGGTGTTATGCATAAATTTGAAATGAGGCTATTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGAAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTTGGGGAAGGAGGTCATaGGCCTTAGGTACAGGTATG | + |
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Preference number: 4 (lower is better) Translates to: CVKLVFAMIYPLTTSMTSWGRRS*ALGTGM Trigger: CATACCTGTACCTAAGGCCCATGACCTCCTTCCCCA...AGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTTCACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR TCA 90 bp | GAGTGCATGGTGAATACGATCAGAATATGTTGCATGGTTTTCACTATATCACATACAACAACGGTGACATaGGAGGCACAGGTAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: ECMVNTIRICCMVFTISHTTTVT*EAQVDR Trigger: CCTGTCTACCTGTGCCTCTCATGTCACCGTTGTTGT...ATGTGATATAGTGAAAACCATGCAACATATTCTGATCGTATTCACCATGCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR TCA 90 bp | GAGTGCATGGTGAATACGATCAGAATATGTTGCATGGTTTTCACTATATCACATTCAGGGAGCGAAGAATaGCCACATAGGAAGCAACCA | + |
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Preference number: 4 (lower is better) Translates to: ECMVNTIRICCMVFTISHSGSEE*PHRKQP Trigger: TGGTTGCTTCCTATGTGGTCATTCTTCGCTCCCTGA...ATGTGATATAGTGAAAACCATGCAACATATTCTGATCGTATTCACCATGCACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR TCA 90 bp | GAGAATAGCCTCATTTCAAATTTATGCATAACACCCTTATGGGCTGAAAAACTTTCAGGGAGCGAAGAATaGCCACATAGGAAGCAACCA | + |
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Preference number: 4 (lower is better) Translates to: ENSLISNLCITPLWAEKLSGSEE*PHRKQP Trigger: TGGTTGCTTCCTATGTGGTCATTCTTCGCTCCCTGA...AAGTTTTTCAGCCCATAAGGGTGTTATGCATAAATTTGAAATGAGGCTATTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR TCA 90 bp | CAAAGCATTTTTATCTCACTGAAGCTGAGAGTAGAATCTCAGAAGCTGAGGTCATGTTACCTGCCAGTGTaGTCAAATAGATTATTAAGC | + |
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Preference number: 4 (lower is better) Translates to: QSIFISLKLRVESQKLRSCYLPV*SNRLLS Trigger: GCTTAATAATCTATTTGATCACACTGGCAGGTAACA...TGACCTCAGCTTCTGAGATTCTACTCTCAGCTTCAGTGAGATAAAAATGCTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR TCA 90 bp | GAGTGCATGGTGAATACGATCAGAATATGTTGCATGGTTTTCACTATATCACATTGTTACCTGCCAGTGTaGTCAAATAGATTATTAAGC | + |
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Preference number: 4 (lower is better) Translates to: ECMVNTIRICCMVFTISHCYLPV*SNRLLS Trigger: GCTTAATAATCTATTTGATCACACTGGCAGGTAACA...ATGTGATATAGTGAAAACCATGCAACATATTCTGATCGTATTCACCATGCACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR TCA 90 bp | GAGAATAGCCTCATTTCAAATTTATGCATAACACCCTTATGGGCTGAAAAACTTAGTAGAAACCATCTATaGTGGACAAGTAGGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: ENSLISNLCITPLWAEKLSRNHL*WTSRTE Trigger: TTCTGTCCTACTTGTCCATCATAGATGGTTTCTACT...AAGTTTTTCAGCCCATAAGGGTGTTATGCATAAATTTGAAATGAGGCTATTCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR CCA 90 bp | GAGTGCATGGTGAATACGATCAGAATATGTTGCATGGTTTTCACTATATCACATTCATTTTGGGTGCTATaGAAGAAGAGTAGAAACCAT | + |
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Preference number: 4 (lower is better) Translates to: ECMVNTIRICCMVFTISHSFWVL*KKSRNH Trigger: ATGGTTTCTACTCTTCTTCCATAGCACCCAAAATGA...ATGTGATATAGTGAAAACCATGCAACATATTCTGATCGTATTCACCATGCACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR CAA 90 bp | GCACCCATGTGGCAACTCATAGTTGCCTGTGACTCCCATTCCAGGGGATCCAAACTGCAGATCTGGGTCTaGGGTCAGGCCCAGGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: APMWQLIVACDSHSRGSKLQIWV*GQAQEN Trigger: ATTCTCCTGGGCCTGACCCAAGACCCAGATCTGCAG...TTTGGATCCCCTGGAATGGGAGTCACAGGCAACTATGAGTTGCCACATGGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR CAA 90 bp | TGTGTGAAGTTAGTTTTTGCAATGATCTATCCACTCACTACCTCCATGACTTCTGAATACACACAGAGGTaGGCTCATGATGGTCATGTA | + |
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Preference number: 5 (lower is better) Translates to: CVKLVFAMIYPLTTSMTSEYTQR*AHDGHV Trigger: TACATGACCATCATGAGCCAACCTCTGTGTGTATTC...AGAAGTCATGGAGGTAGTGAGTGGATAGATCATTGCAAAAACTAACTTCACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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| CDS-3UTR CAA 90 bp | GAGAATAGCCTCATTTCAAATTTATGCATAACACCCTTATGGGCTGAAAAACTTGAATACACACAGAGGTaGGCTCATGATGGTCATGTA | + |
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Preference number: 5 (lower is better) Translates to: ENSLISNLCITPLWAEKLEYTQR*AHDGHV Trigger: TACATGACCATCATGAGCCAACCTCTGTGTGTATTC...AAGTTTTTCAGCCCATAAGGGTGTTATGCATAAATTTGAAATGAGGCTATTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214382.2 ENSMUST00000217065.3 |
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