Pregenerated sensors for OLFR1262 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051313Ensembl transcript IDs: ENSMUST00000111508.9
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCCCACAGAAACTACAAGCTTAGCCCAGAGGGAAATCTGGTCCTaGTTCTGTTGGGTCCAGTCTCCTCCTTCCTCCAGAGGACTAAGA | + |
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Preference number: 1 (lower is better) Translates to: LPTETTSLAQREIWS*FCWVQSPPSSRGLR Trigger: TCTTAGTCCTCTGGAGGAAGGAGGAGACTGGACCCAACAGAACCAGGACCAGATTTCCCTCTGGGCTAAGCTTGTAGTTTCTGTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CCA 90 bp | AGGCAGGCAGGCAGCAGATTCAGGGACAGCCCCAGCACCTGTTGTTaGGGAATCCACATGAAGACAATGCTGAAAAGAATATTACTCCTT | + |
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Preference number: 1 (lower is better) Translates to: RQAGSRFRDSPSTCC*GIHMKTMLKRILLL Trigger: AAGGAGTAATATTCTTTTCAGCATTGTCTTCATGTGGATTCCCCAACAACAGGTGCTGGGGCTGTCCCTGAATCTGCTGCCTGCCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CCA 90 bp | GGTATTGGTGTGCTCTTCCCTGAAGAAGACTATTTTTCCTGCTCTTaGTACTCCTTAGTTGCCTGTGGTTCTTTGTGTAGGGCTGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: GIGVLFPEEDYFSCS*YSLVACGSLCRAES Trigger: GGACTCAGCCCTACACAAAGAACCACAGGCAACTAAGGAGTACCAAGAGCAGGAAAAATAGTCTTCTTCAGGGAAGAGCACACCAATACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR TCA 90 bp | AGTTTCTTTATTTTTGGCAGTATCACACTTATAGACAGTGCGGTATaGTCATATGCACTGCCCACTAGCCGCCCTCTAACAACCCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: SFFIFGSITLIDSAV*SYALPTSRPLTTLL Trigger: TAAGAGGGTTGTTAGAGGGCGGCTAGTGGGCAGTGCATATGATCATACCGCACTGTCTATAAGTGTGATACTGCCAAAAATAAAGAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CCA 90 bp | GCTAAAGTCTCTTTGAGTTCATATGTGCATCAGTCTTACTGTGTCTaGAAGATACTGTTTTCTTGGACTCATCCATTCCCTCTGGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: AKVSLSSYVHQSYCV*KILFSWTHPFPLAL Trigger: AAGAGCCAGAGGGAATGGATGAGTCCAAGAAAACAGTATCTTCCAGACACAGTAAGACTGATGCACATATGAACTCAAAGAGACTTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR GCA 90 bp | ATGGATTGCACTGTGGCATTTTTACATGTGCTTTCTTCTCATGTGTaGCTCCCTACTGCTCTGTATCTTCCTTTTATTAATTTGCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: MDCTVAFLHVLSSHV*LPTALYLPFINLLL Trigger: GAGCAGCAAATTAATAAAAGGAAGATACAGAGCAGTAGGGAGGCACACATGAGAAGAAAGCACATGTAAAAATGCCACAGTGCAATCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR GCA 90 bp | GTTAGTCATTTTTCAGGTCAGTTCCAGCTTGACTTACCCATGTCCTaGATTCAAACTGTATGCTATCTTCAACAAAAGGTTCTTGCAATC | + |
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Preference number: 1 (lower is better) Translates to: VSHFSGQFQLDLPMS*IQTVCYLQQKVLAI Trigger: GATTGCAAGAACCTTTTGTTGAAGATAGCATACAGTTTGAATGCAGGACATGGGTAAGTCAAGCTGGAACTGACCTGAAAAATGACTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CCA 90 bp | CTTATGTGGTTAATATACACAGACTCCATTGGAGAGTCTGTGTATTaGACATTGGAGTCATTGGAGACTCCATTTTTCCTTTGCAATCTG | + |
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Preference number: 1 (lower is better) Translates to: LMWLIYTDSIGESVY*TLESLETPFFLCNL Trigger: CAGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTCCAATACACAGACTCTCCAATGGAGTCTGTGTATATTAACCACATAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR TCA 90 bp | GCAAACACCCCATTTAGAATTGCGTGTTCCAAGATTTCTCATTCTTaGTATGTACTCCAGTTGTGGGTCTCTGTGTTAGTTTTCATCTAT | + |
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Preference number: 1 (lower is better) Translates to: ANTPFRIACSKISHS*YVLQLWVSVLVFIY Trigger: ATAGATGAAAACTAACACAGAGACCCACAACTGGAGTACATATCAAGAATGAGAAATCTTGGAACACGCAATTCTAAATGGGGTGTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR GCA 90 bp | ATATTACAAAAACCCGTGTATTGTCACACATGCATAACAATGGATTaGACTGTGGCATTTTTACATGTGCTTTCTTCTCATGTGTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: ILQKPVYCHTCITMD*TVAFLHVLSSHVCL Trigger: GAGGCACACATGAGAAGAAAGCACATGTAAAAATGCCACAGTGCAATCCATTGTTATGCATGTGTGACAATACACGGGTTTTTGTAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR TCA 90 bp | GCTCTTTTTAATGTTCTATATATGAAGTTGACCTGTTGTAAAGTCTaGAAGCACAGGAATTTCTGGCAGCAGAAGATATTCCAGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: ALFNVLYMKLTCCKV*KHRNFWQQKIFQFL Trigger: CAGAAACTGGAATATCTTCTGCTGCCAGAAATTCCTGTGCTTTCAGACTTTACAACAGGTCAACTTCATATATAGAACATTAAAAAGAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR GCA 90 bp | CATGTCCTGCATTCAAACTGTATGCTATCTTCAACAAAAGGTTCTTaGAATCTGATCTGTTTTGCATCAAGAGGAATGGCAATAGTTTAT | + |
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Preference number: 1 (lower is better) Translates to: HVLHSNCMLSSTKGS*NLICFASRGMAIVY Trigger: ATAAACTATTGCCATTCCTCTTGATGCAAAACAGATCAGATTGCAAGAACCTTTTGTTGAAGATAGCATACAGTTTGAATGCAGGACATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR GCA 90 bp | CAAGAATGCCTTCTTATATTACAAAAACCCGTGTATTGTCACACATaGATAACAATGGATTGCACTGTGGCATTTTTACATGTGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: QECLLILQKPVYCHT*ITMDCTVAFLHVLS Trigger: AGAAAGCACATGTAAAAATGCCACAGTGCAATCCATTGTTATGCATGTGTGACAATACACGGGTTTTTGTAATATAAGAAGGCATTCTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR TCA 90 bp | GAACATCCTCTCCCACTGAGGCCAGGCAAAGCAGCCCAGTTAGGGGAACAGGATCAACTTCTGGCACTGTaGAGGTTAGTCATTTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: EHPLPLRPGKAAQLGEQDQLLAL*RLVIFQ Trigger: CTGAAAAATGACTAACCTTCACAGTGCCAGAAGTTG...ATCCTGTTCCCCTAACTGGGCTGCTTTGCCTGGCCTCAGTGGGAGAGGATGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CCA 90 bp | GAACATCCTCTCCCACTGAGGCCAGGCAAAGCAGCCCAGTTAGGGGAACAGGATATACACAGACTCCATTaGAGAGTCTGTGTATTGGAC | + |
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Preference number: 2 (lower is better) Translates to: EHPLPLRPGKAAQLGEQDIHRLH*RVCVLD Trigger: GTCCAATACACAGACTCTCCAATGGAGTCTGTGTAT...ATCCTGTTCCCCTAACTGGGCTGCTTTGCCTGGCCTCAGTGGGAGAGGATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR TCA 90 bp | GAACATCCTCTCCCACTGAGGCCAGGCAAAGCAGCCCAGTTAGGGGAACAGGATGAAAAAGACTCTAACTaGTTTCCATTGTGGCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: EHPLPLRPGKAAQLGEQDEKDSN*FPLWLH Trigger: ATGCAGCCACAATGGAAATCAGTTAGAGTCTTTTTC...ATCCTGTTCCCCTAACTGGGCTGCTTTGCCTGGCCTCAGTGGGAGAGGATGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR TCA 90 bp | GAACATCCTCTCCCACTGAGGCCAGGCAAAGCAGCCCAGTTAGGGGAACAGGATTATCAGATAAATTTCTaGGCTCCCCACAGAAACTAC | + |
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Preference number: 2 (lower is better) Translates to: EHPLPLRPGKAAQLGEQDYQINF*APHRNY Trigger: GTAGTTTCTGTGGGGAGCTCAGAAATTTATCTGATA...ATCCTGTTCCCCTAACTGGGCTGCTTTGCCTGGCCTCAGTGGGAGAGGATGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CCA 90 bp | GAACATCCTCTCCCACTGAGGCCAGGCAAAGCAGCCCAGTTAGGGGAACAGGATCAGTGTTTCCCACTTTaGATCTGGATTATCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: EHPLPLRPGKAAQLGEQDQCFPL*IWIISF Trigger: GAATGAGATAATCCAGATCCAAAGTGGGAAACACTG...ATCCTGTTCCCCTAACTGGGCTGCTTTGCCTGGCCTCAGTGGGAGAGGATGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CCA 90 bp | GAACATCCTCTCCCACTGAGGCCAGGCAAAGCAGCCCAGTTAGGGGAACAGGATTATGTACTCCAGTTGTaGGTCTCTGTGTTAGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: EHPLPLRPGKAAQLGEQDYVLQL*VSVLVF Trigger: GAAAACTAACACAGAGACCCACAACTGGAGTACATA...ATCCTGTTCCCCTAACTGGGCTGCTTTGCCTGGCCTCAGTGGGAGAGGATGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR GCA 90 bp | CCACAATGTTCTTTGGGTCTTAGAGGGGGAGATGAAGATGCCTTGATTAGGTCTTGTTTATCCCCCTGCTaGCCATCACTCCCACTTTCC | + |
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Preference number: 2 (lower is better) Translates to: PQCSLGLRGGDEDALIRSCLSPC*PSLPLS Trigger: GGAAAGTGGGAGTGATGGGCAGCAGGGGGATAAACA...AGACCTAATCAAGGCATCTTCATCTCCCCCTCTAAGACCCAAAGAACATTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR GCA 90 bp | GAACATCCTCTCCCACTGAGGCCAGGCAAAGCAGCCCAGTTAGGGGAACAGGATTCAACAAAAGGTTCTTaGAATCTGATCTGTTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: EHPLPLRPGKAAQLGEQDSTKGS*NLICFA Trigger: TGCAAAACAGATCAGATTGCAAGAACCTTTTGTTGA...ATCCTGTTCCCCTAACTGGGCTGCTTTGCCTGGCCTCAGTGGGAGAGGATGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CCA 90 bp | GAACATCCTCTCCCACTGAGGCCAGGCAAAGCAGCCCAGTTAGGGGAACAGGATGAGTTAATTTTGTGTTaGTCATTTACTGCTGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: EHPLPLRPGKAAQLGEQDELILC*SFTAEH Trigger: ATGCTCAGCAGTAAATGACCAACACAAAATTAACTC...ATCCTGTTCCCCTAACTGGGCTGCTTTGCCTGGCCTCAGTGGGAGAGGATGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 90 bp | TACACAGACTCCATTGGAGAGTCTGTGTATTGGACATTGGAGTCATaGGAGACTCCATTTTTCCTTTGCAATCTGATGTCAGTAGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: YTDSIGESVYWTLES*ETPFFLCNLMSVGD Trigger: ATCTCCTACTGACATCAGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTCCAATACACAGACTCTCCAATGGAGTCTGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR GCA 90 bp | GACATTGGAGTCATTGGAGACTCCATTTTTCCTTTGCAATCTGATGTCAGTAGGTTGGTTGTAGGTCAATaGCCTTTAAGGAAATGCCCA | + |
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Preference number: 2 (lower is better) Translates to: DIGVIGDSIFPLQSDVSRLVVGQ*PLRKCP Trigger: TGGGCATTTCCTTAAAGGGCATTGACCTACAACCAA...CCTACTGACATCAGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR GCA 90 bp | CCACAATGTTCTTTGGGTCTTAGAGGGGGAGATGAAGATGCCTTGATTAGGTCTGAAGACTATTTTTCCTaGTCTTGGTACTCCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: PQCSLGLRGGDEDALIRSEDYFS*SWYSLV Trigger: AACTAAGGAGTACCAAGAGCAGGAAAAATAGTCTTC...AGACCTAATCAAGGCATCTTCATCTCCCCCTCTAAGACCCAAAGAACATTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CCA 90 bp | CCACAATGTTCTTTGGGTCTTAGAGGGGGAGATGAAGATGCCTTGATTAGGTCTGGACATAATTTACCTTaGGAGGTTGGAATAAGGATT | + |
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Preference number: 2 (lower is better) Translates to: PQCSLGLRGGDEDALIRSGHNLP*EVGIRI Trigger: AATCCTTATTCCAACCTCCCAAGGTAAATTATGTCC...AGACCTAATCAAGGCATCTTCATCTCCCCCTCTAAGACCCAAAGAACATTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CCA 90 bp | CCACAATGTTCTTTGGGTCTTAGAGGGGGAGATGAAGATGCCTTGATTAGGTCTCAACTAGAAAGCAGTTaGCTATATCCAAAACAGTCT | + |
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Preference number: 2 (lower is better) Translates to: PQCSLGLRGGDEDALIRSQLESS*LYPKQS Trigger: AGACTGTTTTGGATATAGCCAACTGCTTTCTAGTTG...AGACCTAATCAAGGCATCTTCATCTCCCCCTCTAAGACCCAAAGAACATTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR GCA 90 bp | CAAACACCCCATTTAGAATTGCGTGTTCCAAGATTTCTCATTCTTGATATGTACGAGTTCCCCTTCCCTTaGATTCTCCACAGCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: QTPHLELRVPRFLILDMYEFPFP*ILHSIC Trigger: ACAAATGCTGTGGAGAATGCAAGGGAAGGGGAACTC...GTACATATCAAGAATGAGAAATCTTGGAACACGCAATTCTAAATGGGGTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 90 bp | GAGACTCCATTTTTCCTTTGCAATCTGATGTCAGTAGGAGATAGCTaGTTGGTTAGGATTGAGAATTTATGTTCATTTCACCGTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: ETPFFLCNLMSVGDS*LVRIENLCSFHRLC Trigger: GCAGAGACGGTGAAATGAACATAAATTCTCAATCCTAACCAACAAGCTATCTCCTACTGACATCAGATTGCAAAGGAAAAATGGAGTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 90 bp | TGGTTAATATACACAGACTCCATTGGAGAGTCTGTGTATTGGACATaGGAGTCATTGGAGACTCCATTTTTCCTTTGCAATCTGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: WLIYTDSIGESVYWT*ESLETPFFLCNLMS Trigger: TGACATCAGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTCCAATACACAGACTCTCCAATGGAGTCTGTGTATATTAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 90 bp | CCTTATGTGGTTAATATACACAGACTCCATTGGAGAGTCTGTGTATaGGACATTGGAGTCATTGGAGACTCCATTTTTCCTTTGCAATCT | + |
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Preference number: 2 (lower is better) Translates to: PYVVNIHRLHWRVCV*DIGVIGDSIFPLQS Trigger: AGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTCCAATACACAGACTCTCCAATGGAGTCTGTGTATATTAACCACATAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR TCA 90 bp | CAAACACCCCATTTAGAATTGCGTGTTCCAAGATTTCTCATTCTTGATATGTACTGGTGTGCTCTTCCCTaGAGAAGACTATTTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: QTPHLELRVPRFLILDMYWCALP*RRLFFL Trigger: CAGGAAAAATAGTCTTCTTCAGGGAAGAGCACACCA...GTACATATCAAGAATGAGAAATCTTGGAACACGCAATTCTAAATGGGGTGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR GCA 90 bp | TATAGCTTTGGCATTATTAGGAGACACACCCTCAGAGAAAACTCCATCATCGTTACCACTAGGTATTCCTaGCTTGCTATAACAAATGAC | + |
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Preference number: 2 (lower is better) Translates to: YSFGIIRRHTLRENSIIVTTRYS*LAITND Trigger: GTCATTTGTTATAGCAAGGCAGGAATACCTAGTGGT...AACGATGATGGAGTTTTCTCTGAGGGTGTGTCTCCTAATAATGCCAAAGCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 90 bp | ACTCCATTTTTCCTTTGCAATCTGATGTCAGTAGGAGATAGCTTGTaGGTTAGGATTGAGAATTTATGTTCATTTCACCGTCTCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: TPFFLCNLMSVGDSL*VRIENLCSFHRLCM Trigger: CATGCAGAGACGGTGAAATGAACATAAATTCTCAATCCTAACCAACAAGCTATCTCCTACTGACATCAGATTGCAAAGGAAAAATGGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 90 bp | AGCAACGTGAGACATAAAGTTTACAAAACTACCAGTGAGTTAATTTaGTGTTGGTCATTTACTGCTGAGCATAGGCCCCTAACCTTATGT | + |
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Preference number: 2 (lower is better) Translates to: SNVRHKVYKTTSELI*CWSFTAEHRPLTLC Trigger: ACATAAGGTTAGGGGCCTATGCTCAGCAGTAAATGACCAACACAAAATTAACTCACTGGTAGTTTTGTAAACTTTATGTCTCACGTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CCA 90 bp | GACATTGGAGTCATTGGAGACTCCATTTTTCCTTTGCAATCTGATGTCAGTAGGAGACAATCATATCTGTaGGACTTTATGAGTATAGCT | + |
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Preference number: 2 (lower is better) Translates to: DIGVIGDSIFPLQSDVSRRQSYL*DFMSIA Trigger: AGCTATACTCATAAAGTCCCACAGATATGATTGTCT...CCTACTGACATCAGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CCA 90 bp | CAAACACCCCATTTAGAATTGCGTGTTCCAAGATTTCTCATTCTTGATATGTACCAGAAAAACAGTATTTaGGTTTCCCCAAGGCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: QTPHLELRVPRFLILDMYQKNSI*VSPRLV Trigger: TACCAGCCTTGGGGAAACCCAAATACTGTTTTTCTG...GTACATATCAAGAATGAGAAATCTTGGAACACGCAATTCTAAATGGGGTGTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 90 bp | CCTTTTATTAATTTGCTGCTCTCCCTCCTCTCCAGGCTCCATCACTaGCACTTGATTTCATCTCATATTTATTCTATTGAGAATTATGAA | + |
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Preference number: 2 (lower is better) Translates to: PFINLLLSLLSRLHH*HLISSHIYSIENYE Trigger: TTCATAATTCTCAATAGAATAAATATGAGATGAAATCAAGTGCAAGTGATGGAGCCTGGAGAGGAGGGAGAGCAGCAAATTAATAAAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR GCA 90 bp | CAAACACCCCATTTAGAATTGCGTGTTCCAAGATTTCTCATTCTTGATATGTACTTAGTTTTCATCTATTaGCCGAAGAGGCTTCTATTA | + |
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Preference number: 2 (lower is better) Translates to: QTPHLELRVPRFLILDMYLVFIY*PKRLLL Trigger: TAATAGAAGCCTCTTCGGGCAATAGATGAAAACTAA...GTACATATCAAGAATGAGAAATCTTGGAACACGCAATTCTAAATGGGGTGTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CCA 72 bp | GAAACTACAAGCTTAGCCCAGAGGGAAATCTGGTCCTaGTTCTGTTGGGTCCAGTCTCCTCCTTCCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: ETTSLAQREIWS*FCWVQSPPSSR Trigger: TCTGGAGGAAGGAGGAGACTGGACCCAACAGAACCAGGACCAGATTTCCCTCTGGGCTAAGCTTGTAGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CCA 72 bp | GGCAGCAGATTCAGGGACAGCCCCAGCACCTGTTGTTaGGGAATCCACATGAAGACAATGCTGAAAAGAATA | + |
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Preference number: 3 (lower is better) Translates to: GSRFRDSPSTCC*GIHMKTMLKRI Trigger: TATTCTTTTCAGCATTGTCTTCATGTGGATTCCCCAACAACAGGTGCTGGGGCTGTCCCTGAATCTGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CAA 90 bp | GACATTGGAGTCATTGGAGACTCCATTTTTCCTTTGCAATCTGATGTCAGTAGGGGAGTTCCCCTTCCCTaGCATTCTCCACAGCATTTG | + |
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Preference number: 3 (lower is better) Translates to: DIGVIGDSIFPLQSDVSRGVPLP*HSPQHL Trigger: CAAATGCTGTGGAGAATGCAAGGGAAGGGGAACTCC...CCTACTGACATCAGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CAA 90 bp | GACATTGGAGTCATTGGAGACTCCATTTTTCCTTTGCAATCTGATGTCAGTAGGGTTGCCTGTGGTTCTTaGTGTAGGGCTGAGTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: DIGVIGDSIFPLQSDVSRVACGS*CRAESS Trigger: AGAGGACTCAGCCCTACACAAAGAACCACAGGCAAC...CCTACTGACATCAGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR TCA 72 bp | TCATTTCACCGTCTCTGCATGGGACCCTGTATAGCTTaGACCTATCCAAGGCCTATATGTGCTGCTAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: SFHRLCMGPCIA*TYPRPICAAKV Trigger: GACTTTAGCAGCACATATAGGCCTTGGATAGGTTCAAGCTATACAGGGTCCCATGCAGAGACGGTGAAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CAA 90 bp | CCACAATGTTCTTTGGGTCTTAGAGGGGGAGATGAAGATGCCTTGATTAGGTCTTATACACAGACTCCATaGGAGAGTCTGTGTATTGGA | + |
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Preference number: 3 (lower is better) Translates to: PQCSLGLRGGDEDALIRSYTQTP*ESLCIG Trigger: TCCAATACACAGACTCTCCAATGGAGTCTGTGTATA...AGACCTAATCAAGGCATCTTCATCTCCCCCTCTAAGACCCAAAGAACATTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CCA 72 bp | GCAGTAGCCTCAGCTAATGTATGTTCAAGATTGCAGTaGCCATGTCACATGTACAAGATGGTATTTCATAGC | + |
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Preference number: 3 (lower is better) Translates to: AVASANVCSRLQ*PCHMYKMVFHS Trigger: GCTATGAAATACCATCTTGTACATGTGACATGGCCACTGCAATCTTGAACATACATTAGCTGAGGCTACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CAA 90 bp | CCACAATGTTCTTTGGGTCTTAGAGGGGGAGATGAAGATGCCTTGATTAGGTCTCAAGATTTCTCATTCTaGATATGTACTCCAGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: PQCSLGLRGGDEDALIRSQDFSF*ICTPVV Trigger: CACAACTGGAGTACATATCAAGAATGAGAAATCTTG...AGACCTAATCAAGGCATCTTCATCTCCCCCTCTAAGACCCAAAGAACATTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CAA 90 bp | CCACAATGTTCTTTGGGTCTTAGAGGGGGAGATGAAGATGCCTTGATTAGGTCTACCAGTGAGTTAATTTaGTGTTGGTCATTTACTGCT | + |
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Preference number: 3 (lower is better) Translates to: PQCSLGLRGGDEDALIRSTSELI*CWSFTA Trigger: AGCAGTAAATGACCAACACAAAATTAACTCACTGGT...AGACCTAATCAAGGCATCTTCATCTCCCCCTCTAAGACCCAAAGAACATTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR TCA 72 bp | CAGAAGATATTCCAGTTTCTGTATCAGATAAATTTCTaGGCTCCCCACAGAAACTACAAGCTTAGCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: QKIFQFLYQINF*APHRNYKLSPE Trigger: CTCTGGGCTAAGCTTGTAGTTTCTGTGGGGAGCTCAGAAATTTATCTGATACAGAAACTGGAATATCTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR GCA 72 bp | TGGACATTGGAGTCATTGGAGACTCCATTTTTCCTTTaGAATCTGATGTCAGTAGGAGATAGCTTGTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: WTLESLETPFFL*NLMSVGDSLLV Trigger: AACCAACAAGCTATCTCCTACTGACATCAGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR-3UTR CAA 90 bp | CAAACACCCCATTTAGAATTGCGTGTTCCAAGATTTCTCATTCTTGATATGTACGCAGAAAAACAGTATTaGGGTTTCCCCAAGGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: QTPHLELRVPRFLILDMYAEKQY*GFPKAG Trigger: ACCAGCCTTGGGGAAACCCAAATACTGTTTTTCTGC...GTACATATCAAGAATGAGAAATCTTGGAACACGCAATTCTAAATGGGGTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR GCA 72 bp | ACTGTGGCATTTTTACATGTGCTTTCTTCTCATGTGTaGCTCCCTACTGCTCTGTATCTTCCTTTTATTAAT | + |
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Preference number: 3 (lower is better) Translates to: TVAFLHVLSSHV*LPTALYLPFIN Trigger: ATTAATAAAAGGAAGATACAGAGCAGTAGGGAGGCACACATGAGAAGAAAGCACATGTAAAAATGCCACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CCA 72 bp | TTAATATACACAGACTCCATTGGAGAGTCTGTGTATTaGACATTGGAGTCATTGGAGACTCCATTTTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: LIYTDSIGESVY*TLESLETPFFL Trigger: AAGGAAAAATGGAGTCTCCAATGACTCCAATGTCCAATACACAGACTCTCCAATGGAGTCTGTGTATATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR GCA 72 bp | CATTCAAACTGTATGCTATCTTCAACAAAAGGTTCTTaGAATCTGATCTGTTTTGCATCAAGAGGAATGGCA | + |
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Preference number: 3 (lower is better) Translates to: HSNCMLSSTKGS*NLICFASRGMA Trigger: TGCCATTCCTCTTGATGCAAAACAGATCAGATTGCAAGAACCTTTTGTTGAAGATAGCATACAGTTTGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CCA 72 bp | ATCCTTGTTCAGTTCATGTGTAGACAATCATATCTGTaGGACTTTATGAGTATAGCTTTGGCATTATTAGGA | + |
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Preference number: 3 (lower is better) Translates to: ILVQFMCRQSYL*DFMSIALALLG Trigger: TCCTAATAATGCCAAAGCTATACTCATAAAGTCCCACAGATATGATTGTCTACACATGAACTGAACAAGGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR GCA 72 bp | CTTCTTATATTACAAAAACCCGTGTATTGTCACACATaGATAACAATGGATTGCACTGTGGCATTTTTACAT | + |
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Preference number: 3 (lower is better) Translates to: LLILQKPVYCHT*ITMDCTVAFLH Trigger: ATGTAAAAATGCCACAGTGCAATCCATTGTTATGCATGTGTGACAATACACGGGTTTTTGTAATATAAGAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | TCCTGCTCTTGGTACTCCTTAGTTGCCTGTGGTTCTTaGTGTAGGGCTGAGTCCTCTCGGCCTTTCCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SCSWYSLVACGS*CRAESSRPFPH Trigger: ATGGGGGAAAGGCCGAGAGGACTCAGCCCTACACAAAGAACCACAGGCAACTAAGGAGTACCAAGAGCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| CDS-3UTR TCA 90 bp | CAAACACCCCATTTAGAATTGCGTGTTCCAAGATTTCTCATTCTTGATATGTACAGTGGCCCCAGAGTGTaGGTGTCAGTGCAGGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: QTPHLELRVPRFLILDMYSGPRV*VSVQAN Trigger: GTTGGCCTGCACTGACACTCACACTCTGGGGCCACT...GTACATATCAAGAATGAGAAATCTTGGAACACGCAATTCTAAATGGGGTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| CDS-3UTR TCA 90 bp | CTGATTTCCATTGTGGCTGCATTAGTTTACCCTTCTATCAAGGTGAATAGGAGTTTAGGGAGCGAAGGATaGCCACATAGGAAGCAACCA | + |
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Preference number: 4 (lower is better) Translates to: LISIVAALVYPSIKVNRSLGSEG*PHRKQP Trigger: TGGTTGCTTCCTATGTGGTCATCCTTCGCTCCCTAA...ACTCCTATTCACCTTGATAGAAGGGTAAACTAATGCAGCCACAATGGAAATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | CTCTCGGCCTTTCCCCCATTCACATTAGCATGCCTATaGCTGTTATCCTTGTTCAGTTCATGTGTAGACAAT | + |
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Preference number: 4 (lower is better) Translates to: LSAFPPFTLACL*LLSLFSSCVDN Trigger: ATTGTCTACACATGAACTGAACAAGGATAACAGCAATAGGCATGCTAATGTGAATGGGGGAAAGGCCGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| CDS-3UTR TCA 90 bp | CCACAATGTTCTTTGGGTCTTAGAGGGGGAGATGAAGATGCCTTGATTAGGTCTTGGAAATCAGCAAGATaGTTTCAGCTGCAGCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: PQCSLGLRGGDEDALIRSWKSAR*FQLQQK Trigger: TTTTTGCTGCAGCTGAAATCATCTTGCTGATTTCCA...AGACCTAATCAAGGCATCTTCATCTCCCCCTCTAAGACCCAAAGAACATTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| CDS-3UTR GCA 90 bp | CCACAATGTTCTTTGGGTCTTAGAGGGGGAGATGAAGATGCCTTGATTAGGTCTGATGAGCATGTTACCTaGCAGTGTGATCAAATAGAT | + |
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Preference number: 4 (lower is better) Translates to: PQCSLGLRGGDEDALIRSDEHVT*QCDQID Trigger: ATCTATTTGATCACACTGGCAGGTAACATGCTCATC...AGACCTAATCAAGGCATCTTCATCTCCCCCTCTAAGACCCAAAGAACATTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| CDS-3UTR TCA 90 bp | TATAGCTTTGGCATTATTAGGAGACACACCCTCAGAGAAAACTCCATCATCGTTATACATGTCGGTTCATaGTGGTCATGTAGTGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: YSFGIIRRHTLRENSIIVIHVGS*WSCSAR Trigger: CCTTGCACTACATGACCATCATGAACCGACATGTAT...AACGATGATGGAGTTTTCTCTGAGGGTGTGTCTCCTAATAATGCCAAAGCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | TCCATTGGAGAGTCTGTGTATTGGACATTGGAGTCATaGGAGACTCCATTTTTCCTTTGCAATCTGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: SIGESVYWTLES*ETPFFLCNLMS Trigger: TGACATCAGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTCCAATACACAGACTCTCCAATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | TCTGATGCAGTAGCCTCAGCTAATGTATGTTCAAGATaGCAGTGGCCATGTCACATGTACAAGATGGTATTT | + |
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Preference number: 4 (lower is better) Translates to: SDAVASANVCSR*QWPCHMYKMVF Trigger: AAATACCATCTTGTACATGTGACATGGCCACTGCAATCTTGAACATACATTAGCTGAGGCTACTGCATCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| CDS-3UTR CCA 90 bp | GACATTGGAGTCATTGGAGACTCCATTTTTCCTTTGCAATCTGATGTCAGTAGGACAATTTTGTCAATGTaGAAGGAGATCACTGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: DIGVIGDSIFPLQSDVSRTILSM*KEITGL Trigger: GAGACCAGTGATCTCCTTCCACATTGACAAAATTGT...CCTACTGACATCAGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| CDS-3UTR GCA 90 bp | CTGATTTCCATTGTGGCTGCATTAGTTTACCCTTCTATCAAGGTGAATAGGAGTATAAATAAGAGTTTCTaGAGATCTGGGTCTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LISIVAALVYPSIKVNRSINKSF*RSGSWV Trigger: GACCCAAGACCCAGATCTGCAGAAACTCTTATTTAT...ACTCCTATTCACCTTGATAGAAGGGTAAACTAATGCAGCCACAATGGAAATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| CDS-3UTR CCA 90 bp | CTGATTTCCATTGTGGCTGCATTAGTTTACCCTTCTATCAAGGTGAATAGGAGTCCACAGAAGGGTAATTaGGCTATAAATGTAGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LISIVAALVYPSIKVNRSPQKGN*AINVVC Trigger: ACAGACTACATTTATAGCCCAATTACCCTTCTGTGG...ACTCCTATTCACCTTGATAGAAGGGTAAACTAATGCAGCCACAATGGAAATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | AGGAGACACACCCTCAGAGAAAACTCCATCATCGTTTaGTCTCTGACTATATACATTATGATCACACACACA | + |
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Preference number: 4 (lower is better) Translates to: RRHTLRENSIIV*SLTIYIMITHT Trigger: TGTGTGTGTGATCATAATGTATATAGTCAGAGACAAAACGATGATGGAGTTTTCTCTGAGGGTGTGTCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | AGACAATCATATCTGTGGGACTTTATGAGTATAGCTTaGGCATTATTAGGAGACACACCCTCAGAGAAAACT | + |
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Preference number: 4 (lower is better) Translates to: RQSYLWDFMSIA*ALLGDTPSEKT Trigger: AGTTTTCTCTGAGGGTGTGTCTCCTAATAATGCCAAAGCTATACTCATAAAGTCCCACAGATATGATTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | GCATTCAAACTGTATGCTATCTTCAACAAAAGGTTCTaGCAATCTGATCTGTTTTGCATCAAGAGGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: AFKLYAIFNKRF*QSDLFCIKRNG Trigger: GCCATTCCTCTTGATGCAAAACAGATCAGATTGCAAGAACCTTTTGTTGAAGATAGCATACAGTTTGAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | TCAAGAATGCCTTCTTATATTACAAAAACCCGTGTATaGTCACACATGCATAACAATGGATTGCACTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SRMPSYITKTRV*SHMHNNGLHCG Trigger: GCCACAGTGCAATCCATTGTTATGCATGTGTGACAATACACGGGTTTTTGTAATATAAGAAGGCATTCTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | AAGGGGAAAGGTTTAATGCAAACACCCCATTTAGAATaGCGTGTTCCAAGATTTCTCATTCTTGATATGTAC | + |
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Preference number: 4 (lower is better) Translates to: KGKGLMQTPHLE*RVPRFLILDMY Trigger: GTACATATCAAGAATGAGAAATCTTGGAACACGCAATTCTAAATGGGGTGTTTGCATTAAACCTTTCCCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | TTCCTTTGCAATCTGATGTCAGTAGGAGATAGCTTGTaGGTTAGGATTGAGAATTTATGTTCATTTCACCGT | + |
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Preference number: 4 (lower is better) Translates to: FLCNLMSVGDSL*VRIENLCSFHR Trigger: ACGGTGAAATGAACATAAATTCTCAATCCTAACCAACAAGCTATCTCCTACTGACATCAGATTGCAAAGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | AGACATAAAGTTTACAAAACTACCAGTGAGTTAATTTaGTGTTGGTCATTTACTGCTGAGCATAGGCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: RHKVYKTTSELI*CWSFTAEHRPL Trigger: TAGGGGCCTATGCTCAGCAGTAAATGACCAACACAAAATTAACTCACTGGTAGTTTTGTAAACTTTATGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| 3UTR CAA 72 bp | TTTTTCCTTTGCAATCTGATGTCAGTAGGAGATAGCTaGTTGGTTAGGATTGAGAATTTATGTTCATTTCAC | + |
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Preference number: 4 (lower is better) Translates to: FFLCNLMSVGDS*LVRIENLCSFH Trigger: GTGAAATGAACATAAATTCTCAATCCTAACCAACAAGCTATCTCCTACTGACATCAGATTGCAAAGGAAAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| CDS-3UTR CAA 90 bp | CCACAATGTTCTTTGGGTCTTAGAGGGGGAGATGAAGATGCCTTGATTAGGTCTTTCTTCATAACCCTTTaGACCTCCTCATTTCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: PQCSLGLRGGDEDALIRSFFITL*TSSFLR Trigger: CCTCAGAAATGAGGAGGTCAAAAGGGTTATGAAGAA...AGACCTAATCAAGGCATCTTCATCTCCCCCTCTAAGACCCAAAGAACATTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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| CDS-3UTR CAA 90 bp | GACATTGGAGTCATTGGAGACTCCATTTTTCCTTTGCAATCTGATGTCAGTAGGAACACACTCACAATTTaGTCAATGTGGAAGGAGATC | + |
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Preference number: 5 (lower is better) Translates to: DIGVIGDSIFPLQSDVSRNTLTI*SMWKEI Trigger: GATCTCCTTCCACATTGACAAAATTGTGAGTGTGTT...CCTACTGACATCAGATTGCAAAGGAAAAATGGAGTCTCCAATGACTCCAATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111508.9 |
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