Pregenerated sensors for OLFR1260 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042894Ensembl transcript IDs: ENSMUST00000111512.10
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTACAGGGTCAGAGGTTCAGTCCATTGTCATCAAGGTGGGAGCATaGCAGCATTTAGGCAGGCATGGCGCAGGCAGAGCTGAGAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: LTGSEVQSIVIKVGA*QHLGRHGAGRAESS Trigger: AGAACTCTCAGCTCTGCCTGCGCCATGCCTGCCTAAATGCTGCCATGCTCCCACCTTGATGACAATGGACTGAACCTCTGACCCTGTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 90 bp | AGGTGTCAGCCTTTGGAGGCTGATTATGGGATGGATCCCTGGATATaGCAGTCTCGAGATGGTCCATTCTTTTGTCTCTGTAACTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: RCQPLEADYGMDPWI*QSRDGPFFCLCNSF Trigger: GAAGGAGTTACAGAGACAAAAGAATGGACCATCTCGAGACTGCCATATCCAGGGATCCATCCCATAATCAGCCTCCAAAGGCTGACACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 90 bp | GCTAGTGTATGCAAAGGTGTCAGCCTTTGGAGGCTGATTATGGGATaGATCCCTGGATATGGCAGTCTCGAGATGGTCCATTCTTTTGTC | + |
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Preference number: 1 (lower is better) Translates to: ASVCKGVSLWRLIMG*IPGYGSLEMVHSFV Trigger: GACAAAAGAATGGACCATCTCGAGACTGCCATATCCAGGGATCCATCCCATAATCAGCCTCCAAAGGCTGACACCTTTGCATACACTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR TCA 90 bp | CTGGGGCATATAAAGTTTGCATGTACAATGGGCCTCTCTTTCCAGTaGTGGCCGACTAGGCCATCTTCTGATACATACGCAGCTAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: LGHIKFACTMGLSFQ*WPTRPSSDTYAARN Trigger: GTTTCTAGCTGCGTATGTATCAGAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGTACATGCAAACTTTATATGCCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 90 bp | ATGCAAAGGTGTCAGCCTTTGGAGGCTGATTATGGGATGGATCCCTaGATATGGCAGTCTCGAGATGGTCCATTCTTTTGTCTCTGTAAC | + |
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Preference number: 1 (lower is better) Translates to: MQRCQPLEADYGMDP*IWQSRDGPFFCLCN Trigger: GTTACAGAGACAAAAGAATGGACCATCTCGAGACTGCCATATCCAGGGATCCATCCCATAATCAGCCTCCAAAGGCTGACACCTTTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 90 bp | TCCTTTCAGCAAAATCTTGCTAGTGTATGCAAAGGTGTCAGCCTTTaGAGGCTGATTATGGGATGGATCCCTGGATATGGCAGTCTCGAG | + |
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Preference number: 1 (lower is better) Translates to: SFQQNLASVCKGVSL*RLIMGWIPGYGSLE Trigger: CTCGAGACTGCCATATCCAGGGATCCATCCCATAATCAGCCTCCAAAGGCTGACACCTTTGCATACACTAGCAAGATTTTGCTGAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR GCA 90 bp | GAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATaGAAAGGTGTCAGCCTTTGGAGGCTGATTATGGGATGGATCCCT | + |
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Preference number: 1 (lower is better) Translates to: ETAISGSFQQNLASV*KGVSLWRLIMGWIP Trigger: AGGGATCCATCCCATAATCAGCCTCCAAAGGCTGACACCTTTGCATACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 90 bp | CACACCTATTTCAACAAGGCCACACCTCAAAATGGTACCGCTCCCTaGTCCAAGAATATACAATCCATCACAACAGGGAAGCAAGAATAT | + |
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Preference number: 1 (lower is better) Translates to: HTYFNKATPQNGTAP*SKNIQSITTGKQEY Trigger: ATATTCTTGCTTCCCTGTTGTGATGGATTGTATATTCTTGGACCAGGGAGCGGTACCATTTTGAGGTGTGGCCTTGTTGAAATAGGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTAGCTCCTCCACTGGGGGCCCTGTGATCCATCCAATAGCTGACTATGAGTATGGGATGGATCCCTaGATATGGCAGTCTCGAGAT | + |
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Preference number: 2 (lower is better) Translates to: FSSSSTGGPVIHPIADYEYGMDP*IWQSRD Trigger: ATCTCGAGACTGCCATATCCAGGGATCCATCCCATA...CTCATAGTCAGCTATTGGATGGATCACAGGGCCCCCAGTGGAGGAGCTAGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CAA 90 bp | TCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTaGGTTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTGATCCAT | + |
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Preference number: 2 (lower is better) Translates to: SYCCSTYRVADPFSS*VTFSSSSTGGPVIH Trigger: ATGGATCACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR GCA 90 bp | GTCAGAGGTTCAGTCCATTGTCATCAAGGTGGGAGCATGGCAGCATTTAGGCAGGGACATGCCTCATCATaGCAAGATGAGGAAACATTC | + |
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Preference number: 2 (lower is better) Translates to: VRGSVHCHQGGSMAAFRQGHASS*QDEETF Trigger: GAATGTTTCCTCATCTTGGCATGATGAGGCATGTCC...CTGCCTAAATGCTGCCATGCTCCCACCTTGATGACAATGGACTGAACCTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTAGCTCCTCCACTGGGGGCCCTGTGATCCATCCAATAGCTGACTATGAGCTCATTAATCCAGGTTaGTTCCTTAAAGACACCTCC | + |
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Preference number: 2 (lower is better) Translates to: FSSSSTGGPVIHPIADYELINPG*FLKDTS Trigger: GGAGGTGTCTTTAAGGAACCAACCTGGATTAATGAG...CTCATAGTCAGCTATTGGATGGATCACAGGGCCCCCAGTGGAGGAGCTAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR CCA 90 bp | TTAGGCAGGCATGGCGCAGGCAGAGCTGAGAGTTCTACATCTTCATCCAAAGGCCATTGTTCCTGGAATTaGGTAGTATGGCTGTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: LGRHGAGRAESSTSSSKGHCSWN*VVWLSK Trigger: TTTAGACAGCCATACTACCCAATTCCAGGAACAATG...GCCTTTGGATGAAGATGTAGAACTCTCAGCTCTGCCTGCGCCATGCCTGCCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR TCA 90 bp | GTCAGAGGTTCAGTCCATTGTCATCAAGGTGGGAGCATGGCAGCATTTAGGCAGCTCATCATGCCAAGATaGGGAAACATTCATAAGACA | + |
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Preference number: 2 (lower is better) Translates to: VRGSVHCHQGGSMAAFRQLIMPR*GNIHKT Trigger: TGTCTTATGAATGTTTCCTCATCTTGGCATGATGAG...CTGCCTAAATGCTGCCATGCTCCCACCTTGATGACAATGGACTGAACCTCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR CCA 90 bp | GATCCCTGGATATGGCAGTCTCGAGATGGTCCATTCTTTTGTCTCTGTAACTCCAAAACAACATTTAATTaGGGCTGGCTTACAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: DPWIWQSRDGPFFCLCNSKTTFN*GWLTGS Trigger: TGACCCTGTAAGCCAGCCCCAATTAAATGTTGTTTT...GGAGTTACAGAGACAAAAGAATGGACCATCTCGAGACTGCCATATCCAGGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR GCA 90 bp | GATCCCTGGATATGGCAGTCTCGAGATGGTCCATTCTTTTGTCTCTGTAACTCCCATTTACATCATTTCTaGCTCTTTTCTCTCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: DPWIWQSRDGPFFCLCNSHLHHF*LFSLHL Trigger: CAGATGGAGAGAAAAGAGGCAGAAATGATGTAAATG...GGAGTTACAGAGACAAAAGAATGGACCATCTCGAGACTGCCATATCCAGGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR CCA 90 bp | TGGATCCCTGGATATGGCAGTCTCGAGATGGTCCATTCTTTTGTCTCTGTAACTCTGAAACAACTAGGCTaGAAAATGATGGCAGCATAT | + |
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Preference number: 2 (lower is better) Translates to: WIPGYGSLEMVHSFVSVTLKQLG*KMMAAY Trigger: ATATGCTGCCATCATTTTCCAGCCTAGTTGTTTCAG...AGTTACAGAGACAAAAGAATGGACCATCTCGAGACTGCCATATCCAGGGATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR CCA 90 bp | ACAACAGGGAAGCAAGAATATACAAACCATCACAACAGGGAAGTTGCATGCATATGTCAACATTGTTCCTaGAATTGGGTAGTATGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TTGKQEYTNHHNREVACICQHCS*NWVVWL Trigger: CAGCCATACTACCCAATTCCAGGAACAATGTTGACA...TATGCATGCAACTTCCCTGTTGTGATGGTTTGTATATTCTTGCTTCCCTGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGCAAGAATATACAAACCATCACAACAGGGAAGTTGCATGCATAGAATCCCACACTATCTACAACTaGATATGCAGATTTGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: GKQEYTNHHNREVACIESHTIYN*ICRFEC Trigger: ACACTCAAATCTGCATATGCAGTTGTAGATAGTGTG...GGATTCTATGCATGCAACTTCCCTGTTGTGATGGTTTGTATATTCTTGCTTCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGCAAGAATATACAAACCATCACAACAGGGAAGTTGCATGCATAGAATCCTGGAATTGGGTAGTATaGCTGTCTAAATTTTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: GKQEYTNHHNREVACIESWNWVV*LSKFWD Trigger: ATCCCAAAATTTAGACAGCCATACTACCCAATTCCA...GGATTCTATGCATGCAACTTCCCTGTTGTGATGGTTTGTATATTCTTGCTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 72 bp | TCAGAGGTTCAGTCCATTGTCATCAAGGTGGGAGCATaGCAGCATTTAGGCAGGCATGGCGCAGGCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SEVQSIVIKVGA*QHLGRHGAGRA Trigger: AGCTCTGCCTGCGCCATGCCTGCCTAAATGCTGCCATGCTCCCACCTTGATGACAATGGACTGAACCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 72 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTaGTTACTTTCTCTAGCTCCTCCACTGGGGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: VPPIGLQIPLAP*LLSLAPPLGAL Trigger: CAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR TCA 72 bp | ATGGCAGCATTTAGGCAGGCATGGCGCAGGCAGAGCTaGGAGTTCTACATCTTCATCCAAAGGCTGCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: MAAFRQAWRRQS*EFYIFIQRLLV Trigger: CACTAGCAGCCTTTGGATGAAGATGTAGAACTCTCAGCTCTGCCTGCGCCATGCCTGCCTAAATGCTGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR CAA 90 bp | GTCAGAGGTTCAGTCCATTGTCATCAAGGTGGGAGCATGGCAGCATTTAGGCAGGCTGCTAGTGGAAGATaGACTTCCAGTCACCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: VRGSVHCHQGGSMAAFRQAASGR*TSSHLG Trigger: CCCTAGGTGACTGGAAGTCAATCTTCCACTAGCAGC...CTGCCTAAATGCTGCCATGCTCCCACCTTGATGACAATGGACTGAACCTCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 72 bp | TGCAAAGGTGTCAGCCTTTGGAGGCTGATTATGGGATaGATCCCTGGATATGGCAGTCTCGAGATGGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: CKGVSLWRLIMG*IPGYGSLEMVH Trigger: ATGGACCATCTCGAGACTGCCATATCCAGGGATCCATCCCATAATCAGCCTCCAAAGGCTGACACCTTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR TCA 72 bp | TTGCTAGTGTATGCAAAGGTGTCAGCCTTTGGAGGCTaGTTATGGGATGGATCCCTGGATATGGCAGTCTCG | + |
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Preference number: 3 (lower is better) Translates to: LLVYAKVSAFGG*LWDGSLDMAVS Trigger: CGAGACTGCCATATCCAGGGATCCATCCCATAATCAGCCTCCAAAGGCTGACACCTTTGCATACACTAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 72 bp | TGTCAGCCTTTGGAGGCTGATTATGGGATGGATCCCTaGATATGGCAGTCTCGAGATGGTCCATTCTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: CQPLEADYGMDP*IWQSRDGPFFC Trigger: ACAAAAGAATGGACCATCTCGAGACTGCCATATCCAGGGATCCATCCCATAATCAGCCTCCAAAGGCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR CAA 90 bp | TTAGGCAGGCATGGCGCAGGCAGAGCTGAGAGTTCTACATCTTCATCCAAAGGCGTTATAATGTCAACATaGTTCCTGGAATTGGGTAGT | + |
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Preference number: 3 (lower is better) Translates to: LGRHGAGRAESSTSSSKGVIMST*FLELGS Trigger: ACTACCCAATTCCAGGAACAATGTTGACATTATAAC...GCCTTTGGATGAAGATGTAGAACTCTCAGCTCTGCCTGCGCCATGCCTGCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 72 bp | TTCAACAAGGCCACACCTCAAAATGGTACCGCTCCCTaGTCCAAGAATATACAATCCATCACAACAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: FNKATPQNGTAP*SKNIQSITTGK Trigger: CTTCCCTGTTGTGATGGATTGTATATTCTTGGACCAGGGAGCGGTACCATTTTGAGGTGTGGCCTTGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 72 bp | CAAAATCTTGCTAGTGTATGCAAAGGTGTCAGCCTTTaGAGGCTGATTATGGGATGGATCCCTGGATATGGC | + |
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Preference number: 3 (lower is better) Translates to: QNLASVCKGVSL*RLIMGWIPGYG Trigger: GCCATATCCAGGGATCCATCCCATAATCAGCCTCCAAAGGCTGACACCTTTGCATACACTAGCAAGATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR TCA 72 bp | ATAAAGTTTGCATGTACAATGGGCCTCTCTTTCCAGTaGTGGCCGACTAGGCCATCTTCTGATACATACGCA | + |
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Preference number: 3 (lower is better) Translates to: IKFACTMGLSFQ*WPTRPSSDTYA Trigger: TGCGTATGTATCAGAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGTACATGCAAACTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 72 bp | AGGTCACACCTATTTCAACAAGGCCACACCTCAAAATaGTACCGCTCCCTGGTCCAAGAATATACAATCCAT | + |
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Preference number: 3 (lower is better) Translates to: RSHLFQQGHTSK*YRSLVQEYTIH Trigger: ATGGATTGTATATTCTTGGACCAGGGAGCGGTACCATTTTGAGGTGTGGCCTTGTTGAAATAGGTGTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR CAA 90 bp | GATCCCTGGATATGGCAGTCTCGAGATGGTCCATTCTTTTGTCTCTGTAACTCCGGAGTAAGCTGCATTTaGTTGTGGTTACATAAACAC | + |
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Preference number: 3 (lower is better) Translates to: DPWIWQSRDGPFFCLCNSGVSCI*LWLHKH Trigger: GTGTTTATGTAACCACAACAAAATGCAGCTTACTCC...GGAGTTACAGAGACAAAAGAATGGACCATCTCGAGACTGCCATATCCAGGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR GCA 72 bp | ATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATaGAAAGGTGTCAGCCTTTGGAGGCTGATTATGGGA | + |
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Preference number: 3 (lower is better) Translates to: ISGSFQQNLASV*KGVSLWRLIMG Trigger: TCCCATAATCAGCCTCCAAAGGCTGACACCTTTGCATACACTAGCAAGATTTTGCTGAAAGGACCCAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR TCA 72 bp | GCAAGAGCTTGGGGAAGGATCCTATGTGTCAATTATTaGTCAGGAGTAAGCTGCATTTTGTTGTGGTTACAT | + |
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Preference number: 3 (lower is better) Translates to: ARAWGRILCVNY*SGVSCILLWLH Trigger: ATGTAACCACAACAAAATGCAGCTTACTCCTGATCAATAATTGACACATAGGATCCTTCCCCAAGCTCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 72 bp | ATCCAGGTTGGTTCCTTAAAGACACCTCCAGCTCAATaGATACCTTCTAGCTTTACTACATCAGGGAAAAAT | + |
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Preference number: 3 (lower is better) Translates to: IQVGSLKTPPAQ*IPSSFTTSGKN Trigger: ATTTTTCCCTGATGTAGTAAAGCTAGAAGGTATCCATTGAGCTGGAGGTGTCTTTAAGGAACCAACCTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR-3UTR CAA 90 bp | TTAACCTTGTCTCTAGGATCCCTAGTTCCAGTATTGTCTAGGGTTTCTAGTGATATAGGGAACTTGTTCTaGGAGACAACTGATCATCCT | + |
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Preference number: 3 (lower is better) Translates to: LTLSLGSLVPVLSRVSSDIGNLF*ETTDHP Trigger: AGGATGATCAGTTGTCTCCAAGAACAAGTTCCCTAT...ATCACTAGAAACCCTAGACAATACTGGAACTAGGGATCCTAGAGACAAGGTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR GCA 72 bp | CTGCCTAATGAAAATCCCAGAGGACATGCCTCATCATaGCAAGATGAGGAAACATTCATAAGACACTATTTA | + |
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Preference number: 3 (lower is better) Translates to: LPNENPRGHASS*QDEETFIRHYL Trigger: TAAATAGTGTCTTATGAATGTTTCCTCATCTTGGCATGATGAGGCATGTCCTCTGGGATTTTCATTAGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 72 bp | TGGTGGAGTGATCTGCATGGAAAACCATTCTCTATATaGTTACTCATTAATCCAGGTTGGTTCCTTAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: WWSDLHGKPFSI*LLINPGWFLKD Trigger: GTCTTTAAGGAACCAACCTGGATTAATGAGTAACCATATAGAGAATGGTTTTCCATGCAGATCACTCCACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CCA 72 bp | CACATACAATTTCATTACCTGCTCACTCAGTATTGGTaGAGTGATCTGCATGGAAAACCATTCTCTATATGG | + |
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Preference number: 3 (lower is better) Translates to: HIQFHYLLTQYW*SDLHGKPFSIW Trigger: CCATATAGAGAATGGTTTTCCATGCAGATCACTCCACCAATACTGAGTGAGCAGGTAATGAAATTGTATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR GCA 72 bp | TTCATTACCTGCTCACTCAGTATTGGTGGAGTGATCTaGATGGAAAACCATTCTCTATATGGTTACTCATTA | + |
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Preference number: 3 (lower is better) Translates to: FITCSLSIGGVI*MENHSLYGYSL Trigger: TAATGAGTAACCATATAGAGAATGGTTTTCCATGCAGATCACTCCACCAATACTGAGTGAGCAGGTAATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| CDS-3UTR TCA 90 bp | TTAGGCAGGCATGGCGCAGGCAGAGCTGAGAGTTCTACATCTTCATCCAAAGGCGAGTCATGCAGCCATTaGAGGAGATTGTTTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LGRHGAGRAESSTSSSKGESCSH*RRLFSF Trigger: AAAGGAAAACAATCTCCTTCAATGGCTGCATGACTC...GCCTTTGGATGAAGATGTAGAACTCTCAGCTCTGCCTGCGCCATGCCTGCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CAA 72 bp | CATCCAATAGCTGACTATGAGCATCCACTTCTGTGTTaGCTAGGCCCCTGCATAGTCTCAAAAGAGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: HPIADYEHPLLC*LGPCIVSKETA Trigger: AGCTGTCTCTTTTGAGACTATGCAGGGGCCTAGCAAACACAGAAGTGGATGCTCATAGTCAGCTATTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CAA 72 bp | AAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTaGCTAGTGTATGCAAAGGTGTCAGCCTTTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KRQLYLGPFSKI*LVYAKVSAFGG Trigger: GCCTCCAAAGGCTGACACCTTTGCATACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| CDS-3UTR CCA 90 bp | ACAACAGGGAAGCAAGAATATACAAACCATCACAACAGGGAAGTTGCATGCATAGAGTTTCTGCACATCTaGGTTCTGTGTCAGCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: TTGKQEYTNHHNREVACIEFLHI*VLCQPK Trigger: CTTGGGCTGACACAGAACCCAGATGTGCAGAAACTC...TATGCATGCAACTTCCCTGTTGTGATGGTTTGTATATTCTTGCTTCCCTGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CAA 72 bp | GGCAAGAGCTTGGGGAAGGATCCTATGTGTCAATTATaGATCAGGAGTAAGCTGCATTTTGTTGTGGTTACA | + |
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Preference number: 4 (lower is better) Translates to: GKSLGKDPMCQL*IRSKLHFVVVT Trigger: TGTAACCACAACAAAATGCAGCTTACTCCTGATCAATAATTGACACATAGGATCCTTCCCCAAGCTCTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CAA 72 bp | CATTCTTTTGTCTCTGTAACTCCTTCCATGGGTGTTTaGTTCCCAATTCTAAGAGAGGGCAAAGTGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: HSFVSVTPSMGV*FPILREGKVST Trigger: TGTGGACACTTTGCCCTCTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| CDS-3UTR TCA 90 bp | TTAACCTTGTCTCTAGGATCCCTAGTTCCAGTATTGTCTAGGGTTTCTAGTGATCTCTCCTGTTCATTGTaGTCATGTAGTGTAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LTLSLGSLVPVLSRVSSDLSCSL*SCSVVA Trigger: AGCCACTACACTACATGATCACAATGAACAGGAGAG...ATCACTAGAAACCCTAGACAATACTGGAACTAGGGATCCTAGAGACAAGGTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| CDS-3UTR GCA 90 bp | AATGGTTGTCTAATCAAGACCTGCCTAATGAAAATCCCAGAGGACATGCCTCATTCAGCTGTTCTTCAGTaGTATGAGTCTTTAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: NGCLIKTCLMKIPEDMPHSAVLQ*YESLES Trigger: GCTCTCTAAAGACTCATAGCACTGAAGAACAGCTGA...ATGAGGCATGTCCTCTGGGATTTTCATTAGGCAGGTCTTGATTAGACAACCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| CDS-3UTR GCA 90 bp | ACAACAGGGAAGCAAGAATATACAAACCATCACAACAGGGAAGTTGCATGCATAAGATGTGGTTGTCAGTaGAGGAAAGTTTTAAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: TTGKQEYTNHHNREVACIRCGCQ*RKVLRA Trigger: CGCTCTTAAAACTTTCCTGCACTGACAACCACATCT...TATGCATGCAACTTCCCTGTTGTGATGGTTTGTATATTCTTGCTTCCCTGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| CDS-3UTR GCA 90 bp | TTAACCTTGTCTCTAGGATCCCTAGTTCCAGTATTGTCTAGGGTTTCTAGTGATAAGGGAGTAGATGAGTaGAAATATGACAAGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: LTLSLGSLVPVLSRVSSDKGVDE*KYDKQE Trigger: CTCTTGCTTGTCATATTTGCACTCATCTACTCCCTT...ATCACTAGAAACCCTAGACAATACTGGAACTAGGGATCCTAGAGACAAGGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| CDS-3UTR CCA 90 bp | TTAACCTTGTCTCTAGGATCCCTAGTTCCAGTATTGTCTAGGGTTTCTAGTGATTTCCCAGGTTTTCTTTaGTTCCAGAGTTTTCTCATG | + |
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Preference number: 4 (lower is better) Translates to: LTLSLGSLVPVLSRVSSDFPGFL*FQSFLM Trigger: CATGAGAAAACTCTGGAACCAAAGAAAACCTGGGAA...ATCACTAGAAACCCTAGACAATACTGGAACTAGGGATCCTAGAGACAAGGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| 3UTR CAA 72 bp | TACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTaGCAGATCCCTTTAGCTCCTTGGTTACTTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: YWLVHIVVPPIG*QIPLAPWLLSL Trigger: TAGAGAAAGTAACCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| CDS-3UTR CAA 90 bp | TCCATCACAACAGGGAAGCAAGAATATACAAACCATCACAACAGGGAAGTTGCAAACACAGCCACAGCTTaGTCAAAGGGGAAGATGACC | + |
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Preference number: 5 (lower is better) Translates to: SITTGKQEYTNHHNREVANTATA*SKGKMT Trigger: GGTCATCTTCCCCTTTGACAAAGCTGTGGCTGTGTT...TGCAACTTCCCTGTTGTGATGGTTTGTATATTCTTGCTTCCCTGTTGTGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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| CDS-3UTR CAA 90 bp | ACCTCAAAATGGTACCGCTCCCTGGTCCAAGAATATACAATCCATCACAACAGGTTTCCCAGGTTTTCTTaGGTTCCAGAGTTTTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: TSKWYRSLVQEYTIHHNRFPRFS*VPEFSH Trigger: ATGAGAAAACTCTGGAACCAAAGAAAACCTGGGAAA...CCTGTTGTGATGGATTGTATATTCTTGGACCAGGGAGCGGTACCATTTTGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111512.10 |
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