RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1259 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000068806

Ensembl transcript IDs: ENSMUST00000090695.3, ENSMUST00000214846.2

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TACCACCACCCGTCAGCACCATTATCATGGTCTCAGTGGAAGATTTaGAGCTTGTTAACTTTATCAAAGGAGTTTATTTTGTACCAGCTT +
Preference number: 1 (lower is better)
Translates to: YHHPSAPLSWSQWKI*SLLTLSKEFILYQL
Trigger: AAGCTGGTACAAAATAAACTCCTTTGATAAAGTTAACAAGCTTCAAATCTTCCACTGAGACCATGATAATGGTGCTGACGGGTGGTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
3UTR TCA 90 bp ATTAATTTCCAAAGTGTGCCTGTCTGTTCTTTGATGAGTATGTTCTaGAGTATCATTCCTCTGCAGCTTAGGCTGTCAATTCAAGACAAG +
Preference number: 1 (lower is better)
Translates to: INFQSVPVCSLMSMF*SIIPLQLRLSIQDK
Trigger: CTTGTCTTGAATTGACAGCCTAAGCTGCAGAGGAATGATACTTCAGAACATACTCATCAAAGAACAGACAGGCACACTTTGGAAATTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
3UTR-3UTR TCA 90 bp GAACAGAAGTTACTACTCCTAACTAAGAAGTTATTTGCATTTAATACCTGCTGGCCAATAGAGTGTCACTaGGCATATCAACCATGTTCC +
Preference number: 2 (lower is better)
Translates to: EQKLLLLTKKLFAFNTCWPIECH*AYQPCS
Trigger: GGAACATGGTTGATATGCTCAGTGACACTCTATTGG...CCAGCAGGTATTAAATGCAAATAACTTCTTAGTTAGGAGTAGTAACTTCTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
3UTR CAA 90 bp GATAAGTTAAATTCACTATACATTTGCTTCCAGTGTCTCTCCAGGTaGTATTTTTCTACCCATCATTCTGAAATATCTTGGGCACTCTTG +
Preference number: 2 (lower is better)
Translates to: DKLNSLYICFQCLSR*YFSTHHSEISWALL
Trigger: CAAGAGTGCCCAAGATATTTCAGAATGATGGGTAGAAAAATACAACCTGGAGAGACACTGGAAGCAAATGTATAGTGAATTTAACTTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
3UTR-3UTR CCA 90 bp GAACAGAAGTTACTACTCCTAACTAAGAAGTTATTTGCATTTAATACCTGCTGGGAAAGAACATATGGTTaGATAAGGAAGGAAATGGGA +
Preference number: 2 (lower is better)
Translates to: EQKLLLLTKKLFAFNTCWERTYG*IRKEMG
Trigger: TCCCATTTCCTTCCTTATCCAACCATATGTTCTTTC...CCAGCAGGTATTAAATGCAAATAACTTCTTAGTTAGGAGTAGTAACTTCTGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
3UTR TCA 72 bp GTGTCTCTCCAGGTTGTATTTTTCTACCCATCATTCTaGAATATCTTGGGCACTCTTGGTGTTAAGAATTTG +
Preference number: 3 (lower is better)
Translates to: VSLQVVFFYPSF*NILGTLGVKNL
Trigger: CAAATTCTTAACACCAAGAGTGCCCAAGATATTTCAGAATGATGGGTAGAAAAATACAACCTGGAGAGACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
3UTR-3UTR CAA 90 bp GAACAGAAGTTACTACTCCTAACTAAGAAGTTATTTGCATTTAATACCTGCTGGAACTTGTCTATGCTTTaGCCTTCTTGTTTAGTGGTG +
Preference number: 3 (lower is better)
Translates to: EQKLLLLTKKLFAFNTCWNLSML*PSCLVV
Trigger: CACCACTAAACAAGAAGGCAAAAGCATAGACAAGTT...CCAGCAGGTATTAAATGCAAATAACTTCTTAGTTAGGAGTAGTAACTTCTGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
3UTR-3UTR CAA 90 bp GAACAGAAGTTACTACTCCTAACTAAGAAGTTATTTGCATTTAATACCTGCTGGAAATTCACTATACATTaGCTTCCAGTGTCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: EQKLLLLTKKLFAFNTCWKFTIH*LPVSLQ
Trigger: CTGGAGAGACACTGGAAGCAAATGTATAGTGAATTT...CCAGCAGGTATTAAATGCAAATAACTTCTTAGTTAGGAGTAGTAACTTCTGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
3UTR GCA 72 bp CTCAAAATCGATGATAAGTTAAATTCACTATACATTTaGTTCCAGTGTCTCTCCAGGTTGTATTTTTCTACC +
Preference number: 3 (lower is better)
Translates to: LKIDDKLNSLYI*FQCLSRLYFST
Trigger: GGTAGAAAAATACAACCTGGAGAGACACTGGAAGCAAATGTATAGTGAATTTAACTTATCATCGATTTTGAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
CDS-3UTR GCA 90 bp CACCACCACCACCACCACCACCACCACTACCACCACCCGTCAGCACCATTATCAACGAACACTACTTTCTaGATTTGGGGGTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: HHHHHHHHHYHHPSAPLSTNTTF*IWGFCV
Trigger: TACACAGAACCCCCAAATGCAGAAAGTAGTGTTCGT...TGATAATGGTGCTGACGGGTGGTGGTAGTGGTGGTGGTGGTGGTGGTGGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
3UTR CAA 72 bp CCCCAGCTGTTATCTGTATCTAACTTGTCTATGCTTTaGCCTTCTTGTTTAGTGGTGTCCCACCTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: PQLLSVSNLSML*PSCLVVSHLLV
Trigger: TACCAGAAGGTGGGACACCACTAAACAAGAAGGCAAAAGCATAGACAAGTTAGATACAGATAACAGCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
CDS-3UTR TCA 90 bp AACTCATTTGTTTCCTTTGAGAGAAAACGTCATCAAATCACACTAGTACCGATTATAGCTTGTGGCTCATaGTGGTCATATAGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: NSFVSFERKRHQITLVPIIACGS*WSYSAE
Trigger: CTCTGCACTATATGACCATCATGAGCCACAAGCTAT...AATCGGTACTAGTGTGATTTGATGACGTTTTCTCTCAAAGGAAACAAATGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
CDS-3UTR TCA 90 bp TTTATCTGTTCTAGTCAGAGATACTTTGTGGTCTGTCTCCTGATTGGATTTCAATTAAAGAGCGCAAGATaGTCACATAGGATCCCATCA +
Preference number: 4 (lower is better)
Translates to: FICSSQRYFVVCLLIGFQLKSAR*SHRIPS
Trigger: TGATGGGATCCTATGTGATCATCTTGCGCTCTTTAA...TTGAAATCCAATCAGGAGACAGACCACAAAGTATCTCTGACTAGAACAGATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
CDS-3UTR GCA 90 bp TTTATCTGTTCTAGTCAGAGATACTTTGTGGTCTGTCTCCTGATTGGATTTCAAGGATGTGTGTGTCCATaGAAACAAGTTCCAACAATG +
Preference number: 4 (lower is better)
Translates to: FICSSQRYFVVCLLIGFQGCVCP*KQVPTM
Trigger: CATTGTTGGAACTTGTTTGCATGGACACACACATCC...TTGAAATCCAATCAGGAGACAGACCACAAAGTATCTCTGACTAGAACAGATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
CDS-3UTR TCA 90 bp GAACAGAAGTTACTACTCCTAACTAAGAAGTTATTTGCATTTAATACCTGCTGGATAAAACTACCACTGTaGTATGAGACACACAGGTGG +
Preference number: 4 (lower is better)
Translates to: EQKLLLLTKKLFAFNTCWIKLPL*YETHRW
Trigger: CCACCTGTGTGTCTCATATCACAGTGGTAGTTTTAT...CCAGCAGGTATTAAATGCAAATAACTTCTTAGTTAGGAGTAGTAACTTCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
3UTR CAA 72 bp TTGTTATCTTCATGGGCACTTTCCCACAAAACTCATTaGTTTCCTTTGAGAGAAAACGTCATCAAATCACAC +
Preference number: 4 (lower is better)
Translates to: LLSSWALSHKTH*FPLRENVIKSH
Trigger: GTGTGATTTGATGACGTTTTCTCTCAAAGGAAACAAATGAGTTTTGTGGGAAAGTGCCCATGAAGATAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
3UTR CAA 72 bp AATTCACTATACATTTGCTTCCAGTGTCTCTCCAGGTaGTATTTTTCTACCCATCATTCTGAAATATCTTGG +
Preference number: 4 (lower is better)
Translates to: NSLYICFQCLSR*YFSTHHSEISW
Trigger: CCAAGATATTTCAGAATGATGGGTAGAAAAATACAACCTGGAGAGACACTGGAAGCAAATGTATAGTGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214846.2
CDS TCA 90 bp GATGACTTTGTTCTCTTGAAGGGAGTCCGCAATCAGCTTTGGAGCTaGAGAAGAAGTGTAAATTGTATCTATCAAGGAGAGGTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: DDFVLLKGVRNQLWS*RRSVNCIYQGEVAQ
Trigger: CTGAGCCACCTCTCCTTGATAGATACAATTTACACTTCTTCTTCAGCTCCAAAGCTGATTGCGGACTCCCTTCAAGAGAACAAAGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090695.3
ENSMUST00000214846.2