Pregenerated sensors for OLFR1256 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075073Ensembl transcript IDs: ENSMUST00000111520.3, ENSMUST00000213833.2, ENSMUST00000215613.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATaGATCACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTAACCAAG | + |
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Preference number: 1 (lower is better) Translates to: GPSKHRSGCSQSAIG*ITGPPVEELEKVTK Trigger: CTTGGTTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR GCA 90 bp | CTAGCTGCATATGTATCAGAAGTGGAAAGAGAGGCCCATTGGTCGTaGAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: LAAYVSEVEREAHWS*KLYLPQYRGMPGPR Trigger: TCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCAGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR TCA 90 bp | GTAAGGAGAAGCACTGGCATGGTGAATGTCTCCAAGTCCATACTCTaGCTGGCATTTCTACCTGTGTGTTTCAGCTCACTACAAACCAGC | + |
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Preference number: 1 (lower is better) Translates to: VRRSTGMVNVSKSIL*LAFLPVCFSSLQTS Trigger: GCTGGTTTGTAGTGAGCTGAAACACACAGGTAGAAATGCCAGTCAGAGTATGGACTTGGAGACATTCACCATGCCAGTGCTTCTCCTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR CCA 90 bp | ATATCTCTAGCTGCATATGTATCAGAAGTGGAAAGAGAGGCCCATTaGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: ISLAAYVSEVEREAH*SCKLYLPQYRGMPG Trigger: CCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCAGCTAGAGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR GCA 90 bp | TTCAAAGAGATTCAGAAATGGCTTTATATAATGGAATGCATGCTATaGTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: FKEIQKWLYIMECML*CAHSRRQCDKLLAS Trigger: GGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCATGCATTCCATTATATAAAGCCATTTCTGAATCTCTTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR TCA 90 bp | TATAATGGAATGCATGCTATGCTGTGCACACAGTCGGAGGCAGTGTaGCAAGTTGTTGGCTTCCCTTTAGCTACAAGAAGAACTTTATTA | + |
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Preference number: 1 (lower is better) Translates to: YNGMHAMLCTQSEAV*QVVGFPLATRRTLL Trigger: TAATAAAGTTCTTCTTGTAGCTAAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCATGCATTCCATTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR GCA 90 bp | CCACATATTTTTCATATATATGTTTTCTGGGCAGACCAATTGGTGTaGTCTTCCCTGGGAAAGACTATTTCTCTCCCGTTTAGCACTCCT | + |
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Preference number: 1 (lower is better) Translates to: PHIFHIYVFWADQLV*SSLGKTISLPFSTP Trigger: AGGAGTGCTAAACGGGAGAGAAATAGTCTTTCCCAGGGAAGAGCACACCAATTGGTCTGCCCAGAAAACATATATATGAAAAATATGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR CCA 90 bp | CTTTTGAGGTCTGTGTCTGCATATATAGCTTTTGATGTATGTGTCTaGCTTAAGTTGATAGGAGCTCAAGAGTGTGGTTGCCCATTTCTG | + |
|
Preference number: 1 (lower is better) Translates to: LLRSVSAYIAFDVCV*LKLIGAQECGCPFL Trigger: CAGAAATGGGCAACCACACTCTTGAGCTCCTATCAACTTAAGCCAGACACATACATCAAAAGCTATATATGCAGACACAGACCTCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
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| 3UTR CCA 90 bp | CTCTCTTTCTATTATGTGAGTCTCAGGGATTTAGTTGAAGTCCATTaGTCTTTGTGGCAGGTGCCTTTATTTTCTGAACCATCTCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: LSFYYVSLRDLVEVH*SLWQVPLFSEPSLW Trigger: CCAGAGAGATGGTTCAGAAAATAAAGGCACCTGCCACAAAGACCAATGGACTTCAACTAAATCCCTGAGACTCACATAATAGAAAGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR CCA 90 bp | TTCATATATATGTTTTCTGGGCAGACCAATTGGTGTGCTCTTCCCTaGGAAAGACTATTTCTCTCCCGTTTAGCACTCCTTAATTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: FIYMFSGQTNWCALP*ERLFLSRLALLNFL Trigger: TAGGAAATTAAGGAGTGCTAAACGGGAGAGAAATAGTCTTTCCCAGGGAAGAGCACACCAATTGGTCTGCCCAGAAAACATATATATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR TCA 90 bp | CACTGGCCTTCAAAAGCACACTCTTTCCCATTCAAACCAAAGCCCTaGAGGACATATGAATATGCACTCAATGCATTTCTTCATATTGAT | + |
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Preference number: 1 (lower is better) Translates to: HWPSKAHSFPFKPKP*RTYEYALNAFLHID Trigger: ATCAATATGAAGAAATGCATTGAGTGCATATTCATATGTCCTTCAGGGCTTTGGTTTGAATGGGAAAGAGTGTGCTTTTGAAGGCCAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTATGCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCCCTTTGTGGTGGTATTCGGGTaGGGGAGAGGGCCACTGATT | + |
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Preference number: 2 (lower is better) Translates to: CYAVHTVGGSVTSCWLPFVVVFG*GRGPLI Trigger: AATCAGTGGCCCTCTCCCTCACCCGAATACCACCAC...AAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTATGCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCCCTTTGTGCATATGCTTTGGTaGCATGGTACACCTAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: CYAVHTVGGSVTSCWLPFVHMLW*HGTPKG Trigger: ACCCTTAGGTGTACCATGGCACCAAAGCATATGCAC...AAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTATGCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCCCTTTGTTCATGTGCTTAGGTaGCATGGTGAATGTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: CYAVHTVGGSVTSCWLPFVHVLR*HGECVE Trigger: CTCCACACATTCACCATGGCACCTAAGCACATGAAC...AAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTATGCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCCCTTTCAAATATGCAAAATGTaGCTCTGTAGGGAGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: CYAVHTVGGSVTSCWLPFQICKM*LCREPE Trigger: CTCTGGCTCCCTACAGAGTCACATTTTGCATATTTG...AAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGATCCTGAGAAACTGTCTCTaGACCATTTCTTCATCAACA | + |
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Preference number: 2 (lower is better) Translates to: HRAPSGGARESNQGAKGILRNCL*TISSST Trigger: TGTTGATGAAGAAATGGTTCAGAGACAGTTTCTCAG...GATCCCTTTAGCTCCTTGGTTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTATGCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCCCTTTCCATCATTCTGTCTCTaGTCCTGTAAGCATGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: CYAVHTVGGSVTSCWLPFPSFCL*SCKHDC Trigger: ACAGTCATGCTTACAGGAGCAGAGACAGAATGATGG...AAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR CAA 90 bp | CATATCTCTAGCTGCATATGTATCAGAAGTGGAAAGAGAGGCCCATaGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: HISSCICIRSGKRGP*VVQTLSASVQGNAR Trigger: CCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCAGCTAGAGATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATATGTATCAGAAGTGGAAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTCAGTCGGAGGCAGTGTaGCAAGTTGTTGGCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: CICIRSGKRGPLVVQTLSQSEAV*QVVGFP Trigger: AGGGAAGCCAACAACTTGTCACACTGCCTCCGACTG...AGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGAATGTGTGGAGGACAGGAGGATAGGAACCTGTGACAGTTCTCTCTTTCTAGTGCATATGCTTTGGTaGCATGGTACACCTAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GECVEDRRIGTCDSSLFLVHMLW*HGTPKG Trigger: ACCCTTAGGTGTACCATGGCACCAAAGCATATGCAC...TAGAAAGAGAGAACTGTCACAGGTTCCTATCCTCCTGTCCTCCACACATTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTATGCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCCCTTTGTATGTATGTGCATATaGTTTGGTGCCATGGTACAC | + |
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Preference number: 2 (lower is better) Translates to: CYAVHTVGGSVTSCWLPFVCMCI*FGAMVH Trigger: GTGTACCATGGCACCAAAGCATATGCACATACATAC...AAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGATCTTGTTTGTATGTATGTaGATATGCTTTGGTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: HRAPSGGARESNQGAKGILFVCM*ICFGAM Trigger: CATGGCACCAAAGCATATGCACATACATACAAACAA...GATCCCTTTAGCTCCTTGGTTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGAATGTGTGGAGGACAGGAGGATAGGAACCTGTGACAGTTCTCTCTTTCTAGGTGCCTTTATTTTCTaGACCATCTCTCTGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: GECVEDRRIGTCDSSLFLGAFIF*TISLAL Trigger: AAGTGCCAGAGAGATGGTTCAGAAAATAAAGGCACC...TAGAAAGAGAGAACTGTCACAGGTTCCTATCCTCCTGTCCTCCACACATTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGAATGTGTGGAGGACAGGAGGATAGGAACCTGTGACAGTTCTCTCTTTCTACCATCATTCTGTCTCTaGTCCTGTAAGCATGACTGT | + |
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Preference number: 2 (lower is better) Translates to: GECVEDRRIGTCDSSLFLPSFCL*SCKHDC Trigger: ACAGTCATGCTTACAGGAGCAGAGACAGAATGATGG...TAGAAAGAGAGAACTGTCACAGGTTCCTATCCTCCTGTCCTCCACACATTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGATCGAGACAAACATGATTTaGAATACACATACACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: HRAPSGGARESNQGAKGIETNMI*NTHTQC Trigger: ACACTGTGTATGTGTATTCCAAATCATGTTTGTCTC...GATCCCTTTAGCTCCTTGGTTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATATGTATCAGAAGTGGAAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGAAGCACTGGCATGGTaGATGTCTCCAAGTCCATAC | + |
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Preference number: 2 (lower is better) Translates to: CICIRSGKRGPLVVQTLSEALAW*MSPSPY Trigger: GTATGGACTTGGAGACATTCACCATGCCAGTGCTTC...AGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGAATGTGTGGAGGACAGGAGGATAGGAACCTGTGACAGTTCTCTCTTTCTAGTATGTATGTGCATATaGTTTGGTGCCATGGTACAC | + |
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Preference number: 2 (lower is better) Translates to: GECVEDRRIGTCDSSLFLVCMCI*FGAMVH Trigger: GTGTACCATGGCACCAAAGCATATGCACATACATAC...TAGAAAGAGAGAACTGTCACAGGTTCCTATCCTCCTGTCCTCCACACATTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTATGCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCCCTTTATATGTATGTTCATGTaGTTAGGTGCCATGGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: CYAVHTVGGSVTSCWLPFICMFM*LGAMVN Trigger: ATTCACCATGGCACCTAAGCACATGAACATACATAT...AAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGAATGTGTGGAGGACAGGAGGATAGGAACCTGTGACAGTTCTCTCTTTCTATTGTTTGTATGTATGTaGATATGCTTTGGTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: GECVEDRRIGTCDSSLFLLFVCM*ICFGAM Trigger: CATGGCACCAAAGCATATGCACATACATACAAACAA...TAGAAAGAGAGAACTGTCACAGGTTCCTATCCTCCTGTCCTCCACACATTCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGAGGTCTGTGTCTGCATATATAGCTTTTGATGTATGTGTCTGGCTTAAGCCCATTTCTGGCCACTaGCCTTCAAAAGCACACTCT | + |
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Preference number: 2 (lower is better) Translates to: LLRSVSAYIAFDVCVWLKPISGH*PSKAHS Trigger: AGAGTGTGCTTTTGAAGGCCAGTGGCCAGAAATGGG...CTTAAGCCAGACACATACATCAAAAGCTATATATGCAGACACAGACCTCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTAGCTACAAGAAGAACTTTATTAGCACCATTGGTGAAAGGGCAATAAGCGGTGCCTTTATTTTCTaGACCATCTCTCTGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: PFSYKKNFISTIGERAISGAFIF*TISLAL Trigger: AAGTGCCAGAGAGATGGTTCAGAAAATAAAGGCACC...GCTTATTGCCCTTTCACCAATGGTGCTAATAAAGTTCTTCTTGTAGCTAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATATGTATCAGAAGTGGAAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGAGGATAGGAACCTGTaGCAGTTCTCTCTTTCTATT | + |
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Preference number: 2 (lower is better) Translates to: CICIRSGKRGPLVVQTLSEDRNL*QFSLSI Trigger: AATAGAAAGAGAGAACTGTCACAGGTTCCTATCCTC...AGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGAATGTGTGGAGGACAGGAGGATAGGAACCTGTGACAGTTCTCTCTTTCTATCTGAACCATCTCTCTaGCACTTAAAATTATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: GECVEDRRIGTCDSSLFLSEPSL*HLKLSL Trigger: AAGAGATAATTTTAAGTGCCAGAGAGATGGTTCAGA...TAGAAAGAGAGAACTGTCACAGGTTCCTATCCTCCTGTCCTCCACACATTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATATGTATCAGAAGTGGAAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTAGTCCATACTCTGACTaGCATTTCTACCTGTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: CICIRSGKRGPLVVQTLSSPYSD*HFYLCV Trigger: AACACACAGGTAGAAATGCCAGTCAGAGTATGGACT...AGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR CAA 90 bp | TTCTATTATGTGAGTCTCAGGGATTTAGTTGAAGTCCATTGGTCTTaGTGGCAGGTGCCTTTATTTTCTGAACCATCTCTCTGGCACTTA | + |
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Preference number: 2 (lower is better) Translates to: FYYVSLRDLVEVHWS*WQVPLFSEPSLWHL Trigger: TAAGTGCCAGAGAGATGGTTCAGAAAATAAAGGCACCTGCCACAAAGACCAATGGACTTCAACTAAATCCCTGAGACTCACATAATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTAGCTACAAGAAGAACTTTATTAGCACCATTGGTGAAAGGGCAATAAGCGGTCTTTGTGGCAGGTaGCTTTATTTTCTGAACCAT | + |
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Preference number: 2 (lower is better) Translates to: PFSYKKNFISTIGERAISGLCGR*LYFLNH Trigger: ATGGTTCAGAAAATAAAGGCACCTGCCACAAAGACC...GCTTATTGCCCTTTCACCAATGGTGCTAATAAAGTTCTTCTTGTAGCTAAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTAGCTACAAGAAGAACTTTATTAGCACCATTGGTGAAAGGGCAATAAGCTTACATCCCATTCATTaGCTGTCCAGGTATAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: PFSYKKNFISTIGERAISLHPIH*LSRYSD Trigger: ATCACTATACCTGGACAGGCAATGAATGGGATGTAA...GCTTATTGCCCTTTCACCAATGGTGCTAATAAAGTTCTTCTTGTAGCTAAAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATATGTATCAGAAGTGGAAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTCTTTATATAATGGAATaGATGCTATGCTGTGCACAC | + |
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Preference number: 2 (lower is better) Translates to: CICIRSGKRGPLVVQTLSLYIME*MLCCAH Trigger: GTGTGCACAGCATAGCATGCATTCCATTATATAAAG...AGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTAGCTACAAGAAGAACTTTATTAGCACCATTGGTGAAAGGGCAATAAGCATATGTATGTTCATGTaGTTAGGTGCCATGGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: PFSYKKNFISTIGERAISICMFM*LGAMVN Trigger: ATTCACCATGGCACCTAAGCACATGAACATACATAT...GCTTATTGCCCTTTCACCAATGGTGCTAATAAAGTTCTTCTTGTAGCTAAAGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCATATATAGCTTTTGATGTATGTGTCTGGCTTAAGTTGATAGGAGCTCAATTCAAACCAAAGCCCTaGAGGACATATGAATATGCA | + |
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Preference number: 2 (lower is better) Translates to: SAYIAFDVCVWLKLIGAQFKPKP*RTYEYA Trigger: TGCATATTCATATGTCCTTCAGGGCTTTGGTTTGAA...TTGAGCTCCTATCAACTTAAGCCAGACACATACATCAAAAGCTATATATGCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
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| 3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTaGCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: WKERPIGRANFI*LSTGECQGQEV Trigger: CACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR CCA 72 bp | AAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATaGATCACAGGGCCCCCAGTGGAGGAGCTAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: KHRSGCSQSAIG*ITGPPVEELEK Trigger: TTTCTCTAGCTCCTCCACTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR CCA 72 bp | AGGAGCTCAAGAGTGTGGTTGCCCATTTCTGGCCACTaGCCTTCAAAAGCACACTCTTTCCCATTCAAACCA | + |
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Preference number: 3 (lower is better) Translates to: RSSRVWLPISGH*PSKAHSFPFKP Trigger: TGGTTTGAATGGGAAAGAGTGTGCTTTTGAAGGCCAGTGGCCAGAAATGGGCAACCACACTCTTGAGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
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| 3UTR-3UTR CAA 90 bp | TGCTATGCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCCCTTTAACAGAGACTGGACTTaGGCAATTCAGCTTTTGGCA | + |
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Preference number: 3 (lower is better) Translates to: CYAVHTVGGSVTSCWLPFNRDWT*AIQLLA Trigger: TGCCAAAAGCTGAATTGCCAAAGTCCAGTCTCTGTT...AAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR TCA 72 bp | ATGCATGCTATGCTGTGCACACAGTCGGAGGCAGTGTaGCAAGTTGTTGGCTTCCCTTTAGCTACAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: MHAMLCTQSEAV*QVVGFPLATRR Trigger: TCTTCTTGTAGCTAAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCATGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR CCA 72 bp | GCTGCATATGTATCAGAAGTGGAAAGAGAGGCCCATTaGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: AAYVSEVEREAH*SCKLYLPQYRG Trigger: TCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGAATGTGTGGAGGACAGGAGGATAGGAACCTGTGACAGTTCTCTCTTTCTAAACAGAGACTGGACTTaGGCAATTCAGCTTTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GECVEDRRIGTCDSSLFLNRDWT*AIQLLA Trigger: TGCCAAAAGCTGAATTGCCAAAGTCCAGTCTCTGTT...TAGAAAGAGAGAACTGTCACAGGTTCCTATCCTCCTGTCCTCCACACATTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR GCA 72 bp | TATGTATCAGAAGTGGAAAGAGAGGCCCATTGGTCGTaGAAACTTTATCTGCCTCAGTACAGGGGAATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: YVSEVEREAHWS*KLYLPQYRGMP Trigger: TGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR CCA 72 bp | GCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTaGCTTCCCTTTAGCTACAAGAAGAACTTTATTAGC | + |
|
Preference number: 3 (lower is better) Translates to: AVHTVGGSVTSC*LPFSYKKNFIS Trigger: GCTAATAAAGTTCTTCTTGTAGCTAAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR CCA 72 bp | ATGTTTTCTGGGCAGACCAATTGGTGTGCTCTTCCCTaGGAAAGACTATTTCTCTCCCGTTTAGCACTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: MFSGQTNWCALP*ERLFLSRLALL Trigger: AAGGAGTGCTAAACGGGAGAGAAATAGTCTTTCCCAGGGAAGAGCACACCAATTGGTCTGCCCAGAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR TCA 72 bp | GTGTGTTTCAGCTCACTACAAACCAGCTGCATGGCCTaGTGTTTCATGCTAGAGGAATCTGCTAGAAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: VCFSSLQTSCMA*CFMLEESARNF Trigger: AAAGTTTCTAGCAGATTCCTCTAGCATGAAACATCAGGCCATGCAGCTGGTTTGTAGTGAGCTGAAACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR CCA 72 bp | CTGCATGCAGAATACCATAACTTCTTCTATTTTCTGTaGGGCTCCACCAAACACAGTGTTCCTCAGTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: LHAEYHNFFYFL*GSTKHSVPQLI Trigger: GATCAACTGAGGAACACTGTGTTTGGTGGAGCCCCACAGAAAATAGAAGAAGTTATGGTATTCTGCATGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
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| 3UTR CCA 72 bp | GCCTCACAAGCAAACAACAGTCAATGCCTCCTAATATaGTACCTGAGTAAACTTCAGCCTCTGTTGTTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: ASQANNSQCLLI*YLSKLQPLLLD Trigger: ATCTAACAACAGAGGCTGAAGTTTACTCAGGTACCATATTAGGAGGCATTGACTGTTGTTTGCTTGTGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR GCA 72 bp | TTTCATATATATGTTTTCTGGGCAGACCAATTGGTGTaGTCTTCCCTGGGAAAGACTATTTCTCTCCCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FHIYVFWADQLV*SSLGKTISLPF Trigger: AAACGGGAGAGAAATAGTCTTTCCCAGGGAAGAGCACACCAATTGGTCTGCCCAGAAAACATATATATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR CCA 72 bp | TCTGTGTCTGCATATATAGCTTTTGATGTATGTGTCTaGCTTAAGTTGATAGGAGCTCAAGAGTGTGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SVSAYIAFDVCV*LKLIGAQECGC Trigger: GCAACCACACTCTTGAGCTCCTATCAACTTAAGCCAGACACATACATCAAAAGCTATATATGCAGACACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
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| 3UTR-3UTR CAA 90 bp | TGCATATGTATCAGAAGTGGAAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGGAGACAAACATGATTaGGAATACACATACACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CICIRSGKRGPLVVQTLSGDKHD*EYTYTV Trigger: CACTGTGTATGTGTATTCCAAATCATGTTTGTCTCC...AGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR TCA 72 bp | TCTCTCTTTCTATTATGTGAGTCTCAGGGATTTAGTTaGAGTCCATTGGTCTTTGTGGCAGGTGCCTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: SLFLLCESQGFS*SPLVFVAGAFI Trigger: AATAAAGGCACCTGCCACAAAGACCAATGGACTTCAACTAAATCCCTGAGACTCACATAATAGAAAGAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR CCA 72 bp | AATAAATTAAAGTTTGCTCTGAGTAAGGAGAAGCACTaGCATGGTGAATGTCTCCAAGTCCATACTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: NKLKFALSKEKH*HGECLQVHTLT Trigger: AGTCAGAGTATGGACTTGGAGACATTCACCATGCCAGTGCTTCTCCTTACTCAGAGCAAACTTTAATTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR CCA 72 bp | ATATTTTTCATATATATGTTTTCTGGGCAGACCAATTaGTGTGCTCTTCCCTGGGAAAGACTATTTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: IFFIYMFSGQTN*CALPWERLFLS Trigger: GGAGAGAAATAGTCTTTCCCAGGGAAGAGCACACCAATTGGTCTGCCCAGAAAACATATATATGAAAAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| 3UTR TCA 72 bp | TTTCAAGTAAATATGGCTACACATACCAACCTTTTCTaGGAAACTGTCTCTGAACCATTTCTTCATCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: FQVNMATHTNLF*ETVSEPFLHQQ Trigger: TTGTTGATGAAGAAATGGTTCAGAGACAGTTTCTCAGAAAAGGTTGGTATGTGTAGCCATATTTACTTGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| CDS-3UTR TCA 90 bp | AAGAGTGTGGTTGCCCATTTCTGGCCACTGGCCTTCAAAAGCACACTCTTTCCCTTCCACCTCCCTTCCTaGTTAAGGTTCTTTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KSVVAHFWPLAFKSTLFPFHLPS*LRFFRE Trigger: CTCTCTAAAGAACCTTAATCAGGAAGGGAGGTGGAA...GGGAAAGAGTGTGCTTTTGAAGGCCAGTGGCCAGAAATGGGCAACCACACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
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| 3UTR CAA 72 bp | AGCTGCATATGTATCAGAAGTGGAAAGAGAGGCCCATaGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SCICIRSGKRGP*VVQTLSASVQG Trigger: CCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| CDS-3UTR TCA 90 bp | GGTGAATGTGTGGAGGACAGGAGGATAGGAACCTGTGACAGTTCTCTCTTTCTATTCCACCTCCCTTCCTaGTTAAGGTTCTTTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GECVEDRRIGTCDSSLFLFHLPS*LRFFRE Trigger: CTCTCTAAAGAACCTTAATCAGGAAGGGAGGTGGAA...TAGAAAGAGAGAACTGTCACAGGTTCCTATCCTCCTGTCCTCCACACATTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| CDS-3UTR CCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGATCATTAGGACCACAGAATaGAAGTCCATAAATAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HRAPSGGARESNQGAKGIIRTTE*KSINST Trigger: AGTACTATTTATGGACTTCCATTCTGTGGTCCTAAT...GATCCCTTTAGCTCCTTGGTTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| CDS-3UTR CCA 90 bp | TGCTATGCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCCCTTTATTAGGACCACAGAATaGAAGTCCATAAATAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: CYAVHTVGGSVTSCWLPFIRTTE*KSINST Trigger: AGTACTATTTATGGACTTCCATTCTGTGGTCCTAAT...AAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| 3UTR CAA 72 bp | GTGAGTCTCAGGGATTTAGTTGAAGTCCATTGGTCTTaGTGGCAGGTGCCTTTATTTTCTGAACCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLRDLVEVHWS*WQVPLFSEPSL Trigger: GAGAGATGGTTCAGAAAATAAAGGCACCTGCCACAAAGACCAATGGACTTCAACTAAATCCCTGAGACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| CDS-3UTR TCA 90 bp | CCCTTTAGCTACAAGAAGAACTTTATTAGCACCATTGGTGAAAGGGCAATAAGCTTCCACCTCCCTTCCTaGTTAAGGTTCTTTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSYKKNFISTIGERAISFHLPS*LRFFRE Trigger: CTCTCTAAAGAACCTTAATCAGGAAGGGAGGTGGAA...GCTTATTGCCCTTTCACCAATGGTGCTAATAAAGTTCTTCTTGTAGCTAAAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| CDS-3UTR CCA 90 bp | AATCTGCATGCAGAATACCATAACTTCTTCTATTTTCTGTGGGGCTCCACCAAAATTAGGACCACAGAATaGAAGTCCATAAATAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: NLHAEYHNFFYFLWGSTKIRTTE*KSINST Trigger: AGTACTATTTATGGACTTCCATTCTGTGGTCCTAAT...TTTGGTGGAGCCCCACAGAAAATAGAAGAAGTTATGGTATTCTGCATGCAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
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| CDS-3UTR CAA 90 bp | TGCTATGCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCCCTTTGTCCTTTCTGCACCTTaGGATTCTCTGAGAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CYAVHTVGGSVTSCWLPFVLSAP*DSLRGP Trigger: TGGGCCTCTCAGAGAATCCAAAGGTGCAGAAAGGAC...AAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| CDS-3UTR CAA 90 bp | CCCTTTAGCTACAAGAAGAACTTTATTAGCACCATTGGTGAAAGGGCAATAAGCGTCCTTTCTGCACCTTaGGATTCTCTGAGAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PFSYKKNFISTIGERAISVLSAP*DSLRGP Trigger: TGGGCCTCTCAGAGAATCCAAAGGTGCAGAAAGGAC...GCTTATTGCCCTTTCACCAATGGTGCTAATAAAGTTCTTCTTGTAGCTAAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| CDS-3UTR CAA 90 bp | TGCTATGCTGTGCACACAGTCGGAGGCAGTGTGACAAGTTGTTGGCTTCCCTTTAACACACTCAACATTTaGTCAATGGGGAAAGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CYAVHTVGGSVTSCWLPFNTLNI*SMGKVL Trigger: TAAGACTTTCCCCATTGACAAAATGTTGAGTGTGTT...AAAGGGAAGCCAACAACTTGTCACACTGCCTCCGACTGTGTGCACAGCATAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| CDS-3UTR CAA 90 bp | CAAAGCCCTGAAGGACATATGAATATGCACTCAATGCATTTCTTCATATTGATGGTCCTTTCTGCACCTTaGGATTCTCTGAGAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSPEGHMNMHSMHFFILMVLSAP*DSLRGP Trigger: TGGGCCTCTCAGAGAATCCAAAGGTGCAGAAAGGAC...CATCAATATGAAGAAATGCATTGAGTGCATATTCATATGTCCTTCAGGGCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
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| CDS-3UTR CAA 90 bp | GGTGAATGTGTGGAGGACAGGAGGATAGGAACCTGTGACAGTTCTCTCTTTCTAAACACACTCAACATTTaGTCAATGGGGAAAGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GECVEDRRIGTCDSSLFLNTLNI*SMGKVL Trigger: TAAGACTTTCCCCATTGACAAAATGTTGAGTGTGTT...TAGAAAGAGAGAACTGTCACAGGTTCCTATCCTCCTGTCCTCCACACATTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213833.2 ENSMUST00000215613.2 |
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| CDS-3UTR CAA 90 bp | CTGCATGCAGAATACCATAACTTCTTCTATTTTCTGTGGGGCTCCACCAAACACAACACACTCAACATTTaGTCAATGGGGAAAGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LHAEYHNFFYFLWGSTKHNTLNI*SMGKVL Trigger: TAAGACTTTCCCCATTGACAAAATGTTGAGTGTGTT...GTGTTTGGTGGAGCCCCACAGAAAATAGAAGAAGTTATGGTATTCTGCATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
||
| CDS-3UTR CAA 90 bp | TGCATATGTATCAGAAGTGGAAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTAAATCTGAAATCAACTaGGGAGAAATGGCTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CICIRSGKRGPLVVQTLSKSEIN*GEMAEE Trigger: TTCTTCAGCCATTTCTCCCAAGTTGATTTCAGATTT...AGATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACTTCTGATACATATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213833.2 |
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| CDS-3UTR CAA 90 bp | AATCTGCATGCAGAATACCATAACTTCTTCTATTTTCTGTGGGGCTCCACCAAAAAATCTGAAATCAACTaGGGAGAAATGGCTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NLHAEYHNFFYFLWGSTKKSEIN*GEMAEE Trigger: TTCTTCAGCCATTTCTCCCAAGTTGATTTCAGATTT...TTTGGTGGAGCCCCACAGAAAATAGAAGAAGTTATGGTATTCTGCATGCAGATT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111520.3 |
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