Pregenerated sensors for OLFR1255 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045148Ensembl transcript IDs: ENSMUST00000057369.2, ENSMUST00000214508.2
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ATTGTCAGTTCTAGGGGCATCTATAGCCTCTCTGTCCCCCAGGCATaGCTTCTCCTTCCTTGTGCACACACATGCGTTCAGATATACAGA | + |
Preference number: 1 (lower is better) Translates to: IVSSRGIYSLSVPQA*LLLPCAHTCVQIYR Trigger: TCTGTATATCTGAACGCATGTGTGTGCACAAGGAAGGAGAAGTCATGCCTGGGGGACAGAGAGGCTATAGATGCCCCTAGAACTGACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214508.2 |
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3UTR-3UTR GCA 90 bp | GTTGATACTTTTATAGAAGATGAGGGTTTGTTGCTGATAACTAGTGAGTGGCTCACTTCTCCTTCCTTGTaGACACACATGCGTTCAGAT | + |
Preference number: 2 (lower is better) Translates to: VDTFIEDEGLLLITSEWLTSPSL*THMRSD Trigger: ATCTGAACGCATGTGTGTGCACAAGGAAGGAGAAGT...GAGCCACTCACTAGTTATCAGCAACAAACCCTCATCTTCTATAAAAGTATCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214508.2 |
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3UTR CCA 72 bp | ATAGAAGATGAGGGTTTGTTGCTGATAACTAGTGAGTaGCTCAAAACTTCCTGTATTGTCAGTTCTAGGGGC | + |
Preference number: 3 (lower is better) Translates to: IEDEGLLLITSE*LKTSCIVSSRG Trigger: GCCCCTAGAACTGACAATACAGGAAGTTTTGAGCCACTCACTAGTTATCAGCAACAAACCCTCATCTTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214508.2 |
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CDS-3UTR GCA 90 bp | TTGCTGATAACTAGTGAGTGGCTCAAAACTTCCTGTATTGTCAGTTCTAGGGGCAGGTGGAGAGAGCTTTaGGCCTGCCTTCTAAGCTAT | + |
Preference number: 4 (lower is better) Translates to: LLITSEWLKTSCIVSSRGRWREL*ACLLSY Trigger: ATAGCTTAGAAGGCAGGCGCAAAGCTCTCTCCACCT...GCCCCTAGAACTGACAATACAGGAAGTTTTGAGCCACTCACTAGTTATCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214508.2 |
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CDS-3UTR GCA 90 bp | TTGCTGATAACTAGTGAGTGGCTCAAAACTTCCTGTATTGTCAGTTCTAGGGGCAGAGAGCTTTGCGCCTaGCTTCTAAGCTATAGTTCT | + |
Preference number: 4 (lower is better) Translates to: LLITSEWLKTSCIVSSRGRELCA*LLSYSS Trigger: AGAACTATAGCTTAGAAGGCAGGCGCAAAGCTCTCT...GCCCCTAGAACTGACAATACAGGAAGTTTTGAGCCACTCACTAGTTATCAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214508.2 |
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CDS-3UTR GCA 90 bp | ACTTTTATAGAAGATGAGGGTTTGTTGCTGATAACTAGTGAGTGGCTCAAAACTGAGTGTGTGTGTCCATaGAAACAAGTTCCAACAATG | + |
Preference number: 4 (lower is better) Translates to: TFIEDEGLLLITSEWLKTECVCP*KQVPTM Trigger: CATTGTTGGAACTTGTTTGCATGGACACACACACTC...AGTTTTGAGCCACTCACTAGTTATCAGCAACAAACCCTCATCTTCTATAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214508.2 |
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3UTR CAA 72 bp | AGAGTAGTTGATACTTTTATAGAAGATGAGGGTTTGTaGCTGATAACTAGTGAGTGGCTCAAAACTTCCTGT | + |
Preference number: 4 (lower is better) Translates to: RVVDTFIEDEGL*LITSEWLKTSC Trigger: ACAGGAAGTTTTGAGCCACTCACTAGTTATCAGCAACAAACCCTCATCTTCTATAAAAGTATCAACTACTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214508.2 |
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3UTR CAA 72 bp | TTAAGAGTAGTTGATACTTTTATAGAAGATGAGGGTTaGTTGCTGATAACTAGTGAGTGGCTCAAAACTTCC | + |
Preference number: 4 (lower is better) Translates to: LRVVDTFIEDEG*LLITSEWLKTS Trigger: GGAAGTTTTGAGCCACTCACTAGTTATCAGCAACAAACCCTCATCTTCTATAAAAGTATCAACTACTCTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214508.2 |
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CDS-3UTR CAA 90 bp | TTGCTGATAACTAGTGAGTGGCTCAAAACTTCCTGTATTGTCAGTTCTAGGGGCTTCAGAGCCTGGCTGTaGATGACAGTGACCACAATG | + |
Preference number: 5 (lower is better) Translates to: LLITSEWLKTSCIVSSRGFRAWL*MTVTTM Trigger: CATTGTGGTCACTGTCATCAACAGCCAGGCTCTGAA...GCCCCTAGAACTGACAATACAGGAAGTTTTGAGCCACTCACTAGTTATCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214508.2 |
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CDS TCA 90 bp | GATGACTTTGTTCTCTTGAAGGGAGTCCGCAATCAGCTTTGGAGCTaGAGAAGAGGTGTAAATTGTATCTATCAAGGAGAGGTGGCTCAG | + |
Preference number: 5 (lower is better) Translates to: DDFVLLKGVRNQLWS*RRGVNCIYQGEVAQ Trigger: CTGAGCCACCTCTCCTTGATAGATACAATTTACACCTCTTCTTCAGCTCCAAAGCTGATTGCGGACTCCCTTCAAGAGAACAAAGTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057369.2 ENSMUST00000214508.2 |
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CDS-3UTR CAA 90 bp | GTTGATACTTTTATAGAAGATGAGGGTTTGTTGCTGATAACTAGTGAGTGGCTCGATGACTTTGTTCTCTaGAAGGGAGTCCGCAATCAG | + |
Preference number: 5 (lower is better) Translates to: VDTFIEDEGLLLITSEWLDDFVL*KGVRNQ Trigger: CTGATTGCGGACTCCCTTCAAGAGAACAAAGTCATC...GAGCCACTCACTAGTTATCAGCAACAAACCCTCATCTTCTATAAAAGTATCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214508.2 |
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CDS-3UTR CAA 90 bp | ACTTTTATAGAAGATGAGGGTTTGTTGCTGATAACTAGTGAGTGGCTCAAAACTAAGAAGAGGTGTAAATaGTATCTATCAAGGAGAGGT | + |
Preference number: 5 (lower is better) Translates to: TFIEDEGLLLITSEWLKTKKRCK*YLSRRG Trigger: ACCTCTCCTTGATAGATACAATTTACACCTCTTCTT...AGTTTTGAGCCACTCACTAGTTATCAGCAACAAACCCTCATCTTCTATAAAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214508.2 |
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CDS TCA 72 bp | GTTCTCTTGAAGGGAGTCCGCAATCAGCTTTGGAGCTaGAGAAGAGGTGTAAATTGTATCTATCAAGGAGAG | + |
Preference number: 6 (lower is better) Translates to: VLLKGVRNQLWS*RRGVNCIYQGE Trigger: CTCTCCTTGATAGATACAATTTACACCTCTTCTTCAGCTCCAAAGCTGATTGCGGACTCCCTTCAAGAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057369.2 ENSMUST00000214508.2 |