Pregenerated sensors for OLFR1254 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075074Ensembl transcript IDs: ENSMUST00000099764.2, ENSMUST00000111523.3, ENSMUST00000216587.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGGCCTGTCAACACTTCATTAGCATGCACCTGCTAGGGAGGGGTTaGCACCAAGTGGTGACTAGCGCAGACACAGTAAGGTTGTTTATG | + |
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Preference number: 1 (lower is better) Translates to: SACQHFISMHLLGRG*HQVVTSADTVRLFM Trigger: CATAAACAACCTTACTGTGTCTGCGCTAGTCACCACTTGGTGCCAACCCCTCCCTAGCAGGTGCATGCTAATGAAGTGTTGACAGGCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR CCA 90 bp | GTGGATATCTGTGAGTTCAAGGCCAGCTTGATGGGAGAGGTGGGGTaGGGGACAGATATCCAGGAGCCAAAGCTACAAAGAGTAAATTCT | + |
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Preference number: 1 (lower is better) Translates to: VDICEFKASLMGEVG*GTDIQEPKLQRVNS Trigger: AGAATTTACTCTTTGTAGCTTTGGCTCCTGGATATCTGTCCCCCACCCCACCTCTCCCATCAAGCTGGCCTTGAACTCACAGATATCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCGATGCCACTACGGGGACCCCGGGCACCCAGGGAGGACTGCTTATATACACTGCTAGGGAGGGGTTaGCACCAAGTGGTGACTAGC | + |
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Preference number: 2 (lower is better) Translates to: ASMPLRGPRAPREDCLYTLLGRG*HQVVTS Trigger: GCTAGTCACCACTTGGTGCCAACCCCTCCCTAGCAG...TGTATATAAGCAGTCCTCCCTGGGTGCCCGGGGTCCCCGTAGTGGCATCGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCGATGCCACTACGGGGACCCCGGGCACCCAGGGAGGACTGCTTATATACAGCAGGTGGATATCTGTaGGTTCAAGGCCAGCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: ASMPLRGPRAPREDCLYTAGGYL*VQGQLD Trigger: ATCAAGCTGGCCTTGAACTCACAGATATCCACCTGC...TGTATATAAGCAGTCCTCCCTGGGTGCCCGGGGTCCCCGTAGTGGCATCGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCGATGCCACTACGGGGACCCCGGGCACCCAGGGAGGACTGCTTATATACACATTTGCATTTCCAATaGTATACCAAAAGTCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: ASMPLRGPRAPREDCLYTHLHFQ*YTKSPP Trigger: TGGGGGACTTTTGGTATAGCATTGGAAATGCAAATG...TGTATATAAGCAGTCCTCCCTGGGTGCCCGGGGTCCCCGTAGTGGCATCGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGGTGGTGGTGCACACCTTTAATCCAGCACTCCTGAGACAGAGGCAGGTGTTCTCAGCAACTACATaGTGGTTCACAACTATCTGT | + |
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Preference number: 2 (lower is better) Translates to: QVVVVHTFNPALLRQRQVFSATT*WFTTIC Trigger: ACAGATAGTTGTGAACCACCATGTAGTTGCTGAGAA...CACCTGCCTCTGTCTCAGGAGTGCTGGATTAAAGGTGTGCACCACCACCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTGACTGCTCTTCCAGATGTCCTGAGTTCAATTCTCAGCAACTACATGGTGTGTGTTGGAAGGCAGTaGCAGTGTATTCACATATAT | + |
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Preference number: 2 (lower is better) Translates to: ALTALPDVLSSILSNYMVCVGRQ*QCIHIY Trigger: ATATATGTGAATACACTGTCACTGCCTTCCAACACA...CACCATGTAGTTGCTGAGAATTGAACTCAGGACATCTGGAAGAGCAGTCAGTGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTCAGCAATTAAGAGCACTGACTGCTCTTCCAGATGTCCTGAGTTCAATTTCAGCAACTACATGGTaGTTCACAACTATCTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: MAQQLRALTALPDVLSSISATTW*FTTICN Trigger: ATTACAGATAGTTGTGAACCACCATGTAGTTGCTGA...AATTGAACTCAGGACATCTGGAAGAGCAGTCAGTGCTCTTAATTGCTGAGCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR CCA 72 bp | GCACCCAGGGAGGACTGCTTATATACACCGCAGCACTaGGGAGGGCTGTATGTCTTCCTGGGATTGGTCGGC | + |
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Preference number: 3 (lower is better) Translates to: APREDCLYTPQH*GGLYVFLGLVG Trigger: GCCGACCAATCCCAGGAAGACATACAGCCCTCCCCAGTGCTGCGGTGTATATAAGCAGTCCTCCCTGGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGTGGTGGTGGTGCACACCTTTAATCCAGCACTCCTGAGACAGAGGCAGGTGGAGTTCAAGGCCAGCTaGATGGGAGAGGTGGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: QVVVVHTFNPALLRQRQVEFKAS*MGEVGW Trigger: CCACCCCACCTCTCCCATCAAGCTGGCCTTGAACTC...CACCTGCCTCTGTCTCAGGAGTGCTGGATTAAAGGTGTGCACCACCACCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTCGATGCCACTACGGGGACCCCGGGCACCCAGGGAGGACTGCTTATATACATATGTCTTCCTGGGATaGGTCGGCCTGTCAACACTT | + |
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Preference number: 3 (lower is better) Translates to: ASMPLRGPRAPREDCLYTYVFLG*VGLSTL Trigger: AAGTGTTGACAGGCCGACCAATCCCAGGAAGACATA...TGTATATAAGCAGTCCTCCCTGGGTGCCCGGGGTCCCCGTAGTGGCATCGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR GCA 72 bp | ATTCTTCTCAACAGCTTTATTGCAGGAACGCCTCGATaGCACTACGGGGACCCCGGGCACCCAGGGAGGACT | + |
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Preference number: 3 (lower is better) Translates to: ILLNSFIAGTPR*HYGDPGHPGRT Trigger: AGTCCTCCCTGGGTGCCCGGGGTCCCCGTAGTGGCATCGAGGCGTTCCTGCAATAAAGCTGTTGAGAAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR CCA 72 bp | CAACACTTCATTAGCATGCACCTGCTAGGGAGGGGTTaGCACCAAGTGGTGACTAGCGCAGACACAGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: QHFISMHLLGRG*HQVVTSADTVR Trigger: CCTTACTGTGTCTGCGCTAGTCACCACTTGGTGCCAACCCCTCCCTAGCAGGTGCATGCTAATGAAGTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTCGATGCCACTACGGGGACCCCGGGCACCCAGGGAGGACTGCTTATATACATCCCTAGTGATTTCATaGAGCAAGCATAGTCATTGT | + |
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Preference number: 3 (lower is better) Translates to: ASMPLRGPRAPREDCLYTSLVIS*SKHSHC Trigger: ACAATGACTATGCTTGCTCAATGAAATCACTAGGGA...TGTATATAAGCAGTCCTCCCTGGGTGCCCGGGGTCCCCGTAGTGGCATCGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR TCA 72 bp | AGGTGGTGGTGGTGCACACCTTTAATCCAGCACTCCTaGGACAGAGGCAGGTGGATATCTGTGAGTTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: RWWWCTPLIQHS*DRGRWISVSSR Trigger: CCTTGAACTCACAGATATCCACCTGCCTCTGTCTCAGGAGTGCTGGATTAAAGGTGTGCACCACCACCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR CAA 90 bp | GCACTGACTGCTCTTCCAGATGTCCTGAGTTCAATTCTCAGCAACTACATGGTGAACTCCTCTGGTGTGTaGGAAGGCAGTGACAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: ALTALPDVLSSILSNYMVNSSGV*EGSDSV Trigger: TACACTGTCACTGCCTTCCAACACACCAGAGGAGTT...CACCATGTAGTTGCTGAGAATTGAACTCAGGACATCTGGAAGAGCAGTCAGTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR CAA 90 bp | GCACTGACTGCTCTTCCAGATGTCCTGAGTTCAATTCTCAGCAACTACATGGTGTCCCTAGTGATTTCATaGAGCAAGCATAGTCATTGT | + |
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Preference number: 3 (lower is better) Translates to: ALTALPDVLSSILSNYMVSLVIS*SKHSHC Trigger: ACAATGACTATGCTTGCTCAATGAAATCACTAGGGA...CACCATGTAGTTGCTGAGAATTGAACTCAGGACATCTGGAAGAGCAGTCAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGGTGGGGTGGGGGACAGATATCCAGGAGCCAAAGCTACAAAGAGTAAATTCAGGTATTTAGCTCATTaGCATTTCCAATGCTATACC | + |
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Preference number: 3 (lower is better) Translates to: RGGVGDRYPGAKATKSKFRYLAH*HFQCYT Trigger: GGTATAGCATTGGAAATGCAAATGAGCTAAATACCT...GAATTTACTCTTTGTAGCTTTGGCTCCTGGATATCTGTCCCCCACCCCACCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR TCA 90 bp | GCCTCGATGCCACTACGGGGACCCCGGGCACCCAGGGAGGACTGCTTATATACAAATAGCATCCATGAGTaGCAGATAGGCAAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: ASMPLRGPRAPREDCLYTNSIHE*QIGKEE Trigger: TTCTTCCTTGCCTATCTGTCACTCATGGATGCTATT...TGTATATAAGCAGTCCTCCCTGGGTGCCCGGGGTCCCCGTAGTGGCATCGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR TCA 90 bp | AGACAGAGGCAGGTGGATATCTGTGAGTTCAAGGCCAGCTTGATGGGAGAGGTGTGGCCAACAGGATCCTaGGTGAGACCCAGTAGAATA | + |
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Preference number: 4 (lower is better) Translates to: RQRQVDICEFKASLMGEVWPTGS*VRPSRI Trigger: TATTCTACTGGGTCTCACTCAGGATCCTGTTGGCCA...CACCTCTCCCATCAAGCTGGCCTTGAACTCACAGATATCCACCTGCCTCTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR TCA 90 bp | AGCTCATTTGCATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCTGGCCAACAGGATCCTaGGTGAGACCCAGTAGAATA | + |
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Preference number: 4 (lower is better) Translates to: SSFAFPMLYQKSPIPTHPWPTGS*VRPSRI Trigger: TATTCTACTGGGTCTCACTCAGGATCCTGTTGGCCA...GGGGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGCAAATGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR GCA 90 bp | GCACTGACTGCTCTTCCAGATGTCCTGAGTTCAATTCTCAGCAACTACATGGTGTTGAGCCATGGAGTGTaGAAACCCTCCAACCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ALTALPDVLSSILSNYMVLSHGV*KPSNPG Trigger: ACCTGGGTTGGAGGGTTTGCACACTCCATGGCTCAA...CACCATGTAGTTGCTGAGAATTGAACTCAGGACATCTGGAAGAGCAGTCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR GCA 90 bp | AGCTCATTTGCATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACCACCATACAGATTaGTCCATCGTTGGCAATGAC | + |
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Preference number: 4 (lower is better) Translates to: SSFAFPMLYQKSPIPTHPHHHTD*SIVGND Trigger: GTCATTGCCAACGATGGAGCAATCTGTATGGTGGTG...GGGGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGCAAATGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR TCA 90 bp | TCAGCAATTAAGAGCACTGACTGCTCTTCCAGATGTCCTGAGTTCAATTCTCAGATAACGACCATGATGTaGGAACTGCAAGTGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: SAIKSTDCSSRCPEFNSQITTMM*ELQVDR Trigger: CCTGTCCACTTGCAGTTCTCACATCATGGTCGTTAT...CTGAGAATTGAACTCAGGACATCTGGAAGAGCAGTCAGTGCTCTTAATTGCTGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR GCA 90 bp | CTAGTGATTTCATTGAGCAAGCATAGTCATTGTGACCACTTACTGTCTGCTGTTTTGAGCCATGGAGTGTaGAAACCCTCCAACCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LVISLSKHSHCDHLLSAVLSHGV*KPSNPG Trigger: ACCTGGGTTGGAGGGTTTGCACACTCCATGGCTCAA...AACAGCAGACAGTAAGTGGTCACAATGACTATGCTTGCTCAATGAAATCACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR TCA 90 bp | CTAGTGATTTCATTGAGCAAGCATAGTCATTGTGACCACTTACTGTCTGCTGTTATAACGACCATGATGTaGGAACTGCAAGTGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: LVISLSKHSHCDHLLSAVITTMM*ELQVDR Trigger: CCTGTCCACTTGCAGTTCTCACATCATGGTCGTTAT...AACAGCAGACAGTAAGTGGTCACAATGACTATGCTTGCTCAATGAAATCACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR CAA 90 bp | GCCTCGATGCCACTACGGGGACCCCGGGCACCCAGGGAGGACTGCTTATATACAACCACAATAATCAAATaGCCTGCCATGGTCACAATG | + |
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Preference number: 5 (lower is better) Translates to: ASMPLRGPRAPREDCLYTTTIIK*PAMVTM Trigger: CATTGTGACCATGGCAGGCAATTTGATTATTGTGGT...TGTATATAAGCAGTCCTCCCTGGGTGCCCGGGGTCCCCGTAGTGGCATCGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR CAA 90 bp | AGACAGAGGCAGGTGGATATCTGTGAGTTCAAGGCCAGCTTGATGGGAGAGGTGGTAAACAAAGAGAACTaGAGCCATGGAGTGTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: RQRQVDICEFKASLMGEVVNKEN*SHGVCK Trigger: TTTGCACACTCCATGGCTCAAGTTCTCTTTGTTTAC...CACCTCTCCCATCAAGCTGGCCTTGAACTCACAGATATCCACCTGCCTCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR CAA 90 bp | AGAGGTGGGGTGGGGGACAGATATCCAGGAGCCAAAGCTACAAAGAGTAAATTCCAGATTGCTCCATCGTaGGCAATGACAGTAAGACCA | + |
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Preference number: 5 (lower is better) Translates to: RGGVGDRYPGAKATKSKFQIAPS*AMTVRP Trigger: TGGTCTTACTGTCATTGCCAACGATGGAGCAATCTG...GAATTTACTCTTTGTAGCTTTGGCTCCTGGATATCTGTCCCCCACCCCACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR CAA 90 bp | AGAGGTGGGGTGGGGGACAGATATCCAGGAGCCAAAGCTACAAAGAGTAAATTCACCACAATAATCAAATaGCCTGCCATGGTCACAATG | + |
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Preference number: 5 (lower is better) Translates to: RGGVGDRYPGAKATKSKFTTIIK*PAMVTM Trigger: CATTGTGACCATGGCAGGCAATTTGATTATTGTGGT...GAATTTACTCTTTGTAGCTTTGGCTCCTGGATATCTGTCCCCCACCCCACCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR CAA 90 bp | TCAGCAATTAAGAGCACTGACTGCTCTTCCAGATGTCCTGAGTTCAATTCTCAGGTGTTCCACAAAGAGTaGGCCCATGCAAGCTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SAIKSTDCSSRCPEFNSQVFHKE*AHASSE Trigger: TTCAGAGCTTGCATGGGCCAACTCTTTGTGGAACAC...CTGAGAATTGAACTCAGGACATCTGGAAGAGCAGTCAGTGCTCTTAATTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR CAA 90 bp | ATGGCTCAGCAATTAAGAGCACTGACTGCTCTTCCAGATGTCCTGAGTTCAATTGTAAACAAAGAGAACTaGAGCCATGGAGTGTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: MAQQLRALTALPDVLSSIVNKEN*SHGVCK Trigger: TTTGCACACTCCATGGCTCAAGTTCTCTTTGTTTAC...AATTGAACTCAGGACATCTGGAAGAGCAGTCAGTGCTCTTAATTGCTGAGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS-3UTR CAA 90 bp | CTAGTGATTTCATTGAGCAAGCATAGTCATTGTGACCACTTACTGTCTGCTGTTCAGATTGCTCCATCGTaGGCAATGACAGTAAGACCA | + |
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Preference number: 5 (lower is better) Translates to: LVISLSKHSHCDHLLSAVQIAPS*AMTVRP Trigger: TGGTCTTACTGTCATTGCCAACGATGGAGCAATCTG...AACAGCAGACAGTAAGTGGTCACAATGACTATGCTTGCTCAATGAAATCACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS CAA 72 bp | CTTGAGCCATGGAGTGTGCAAACCCTCCAACCCAGGTaGCCATCACCAGGAGAATGCAAACCCGGTGATTCA | + |
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Preference number: 6 (lower is better) Translates to: LEPWSVQTLQPR*PSPGECKPGDS Trigger: TGAATCACCGGGTTTGCATTCTCCTGGTGATGGCAACCTGGGTTGGAGGGTTTGCACACTCCATGGCTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099764.2 ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS GCA 72 bp | AAGATCGTAAACAAAGAGAACTTGAGCCATGGAGTGTaGAAACCCTCCAACCCAGGTTGCCATCACCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: KIVNKENLSHGV*KPSNPGCHHQE Trigger: CTCCTGGTGATGGCAACCTGGGTTGGAGGGTTTGCACACTCCATGGCTCAAGTTCTCTTTGTTTACGATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099764.2 ENSMUST00000111523.3 ENSMUST00000216587.2 |
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| CDS CCA 72 bp | AGAAAGGAAGATCGTAAACAAAGAGAACTTGAGCCATaGAGTGTGCAAACCCTCCAACCCAGGTTGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: RKEDRKQRELEP*SVQTLQPRLPS Trigger: TGATGGCAACCTGGGTTGGAGGGTTTGCACACTCCATGGCTCAAGTTCTCTTTGTTTACGATCTTCCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099764.2 ENSMUST00000111523.3 ENSMUST00000216587.2 |
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