Pregenerated sensors for OLFR1253 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075075Ensembl transcript IDs: ENSMUST00000213484.2, ENSMUST00000215185.2, ENSMUST00000215988.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTAGAAGAGGAGGTGGAGAGAATGTAAGCGCCAGAGGTGATGTATaGCTTCCAGGACACAGTGTTTTTCTGACACTGGTTCACATACCA | + |
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Preference number: 1 (lower is better) Translates to: CRRGGGENVSARGDV*LPGHSVFLTLVHIP Trigger: TGGTATGTGAACCAGTGTCAGAAAAACACTGTGTCCTGGAAGTCATACATCACCTCTGGCGCTTACATTCTCTCCACCTCCTCTTCTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR GCA 90 bp | AGGTTTTCATGGACATTTGCAATTACTGAGGCTCTTTTCTCAGAGTaGAGCTCAATGGGCCATGAGGTGATTATGGCCATTTCAAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: RFSWTFAITEALFSE*SSMGHEVIMAISSK Trigger: TTTACTTGAAATGGCCATAATCACCTCATGGCCCATTGAGCTGCACTCTGAGAAAAGAGCCTCAGTAATTGCAAATGTCCATGAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGAGAATGTAAGCGCCAGAGGTGATGTATaGCTTCCAGGACACAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LLSMLRELCRRGGGENVSARGDV*LPGHSV Trigger: AACACTGTGTCCTGGAAGTCATACATCACCTCTGGC...GCTTACATTCTCTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGAGAATGTAAGCAATTCACAGAGACTGTaGGAGCTTGCACAAGACCTG | + |
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Preference number: 2 (lower is better) Translates to: LLSMLRELCRRGGGENVSNSQRL*ELAQDL Trigger: CAGGTCTTGTGCAAGCTCTCACAGTCTCTGTGAATT...GCTTACATTCTCTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTTAATGACTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGGCCAGAGGTGATGTATaGCTTCCAGGACACAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SLNDSFQCSGNYVEEEVEARGDV*LPGHSV Trigger: AACACTGTGTCCTGGAAGTCATACATCACCTCTGGC...CTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAGTCATTAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR GCA 90 bp | TCACTTAATGACTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGAGCTTGCACAAGACCTaGACAAATACAGTCCAGACA | + |
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Preference number: 2 (lower is better) Translates to: SLNDSFQCSGNYVEEEVESLHKT*TNTVQT Trigger: TGTCTGGACTGTATTTGTGCAGGTCTTGTGCAAGCT...CTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAGTCATTAAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTTAATGACTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGAGTAGCAAGTGGGATTaGGAACCTTCAAGCAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SLNDSFQCSGNYVEEEVESSKWD*EPSSRN Trigger: GTTTCTGCTTGAAGGTTCCCAATCCCACTTGCTACT...CTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAGTCATTAAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGAGAATGTAAGCATTTACAGTAGCAAGTaGGATTGGGAACCTTCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLSMLRELCRRGGGENVSIYSSK*DWEPSS Trigger: GCTTGAAGGTTCCCAATCCCACTTGCTACTGTAAAT...GCTTACATTCTCTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGAGAATGTAAGCCAGAGACATAGAACATaGAGTTGGTTGAGAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LLSMLRELCRRGGGENVSQRHRT*SWLRKE Trigger: TTCCTTTCTCAACCAACTTCATGTTCTATGTCTCTG...GCTTACATTCTCTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGAGAATGTAAGCTTGACCAACAGAAAATaGACTCCATGGGTTTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: LLSMLRELCRRGGGENVSLTNRK*TPWVWI Trigger: AATCCAAACCCATGGAGTTCATTTTCTGTTGGTCAA...GCTTACATTCTCTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGAGAATGTAAGCTGCAGGCAGCTATACTaGATGCAAAATTTGACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLSMLRELCRRGGGENVSCRQLY*MQNLTK Trigger: CTTTGTCAAATTTTGCATGCAGTATAGCTGCCTGCA...GCTTACATTCTCTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGTTGTGTGCAACCTAACATGGTTTTTCTTCAATGAAGGTTTTCATGGACATCAGCTCAATGGGCCATaGGGTGATTATGGCCATTTC | + |
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Preference number: 2 (lower is better) Translates to: SVVCNLTWFFFNEGFHGHQLNGP*GDYGHF Trigger: GAAATGGCCATAATCACCTCATGGCCCATTGAGCTG...ATGTCCATGAAAACCTTCATTGAAGAAAAACCATGTTAGGTTGCACACAACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR GCA 90 bp | TCACTTAATGACTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGTGCAGGCAGCTATACTaGATGCAAAATTTGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: SLNDSFQCSGNYVEEEVECRQLY*MQNLTK Trigger: CTTTGTCAAATTTTGCATGCAGTATAGCTGCCTGCA...CTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAGTCATTAAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGAGAATGTAAGCAAACACAAAGTTCCATaGCTACTCAGAAGCTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: LLSMLRELCRRGGGENVSKHKVP*LLRSYV Trigger: TACATAGCTTCTGAGTAGGCATGGAACTTTGTGTTT...GCTTACATTCTCTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR GCA 90 bp | GACATCAGGACTTCTCTAAACTGCCTACACATTCAACAAGCTATCTGCCAAAATAGCTTGCACAAGACCTaGACAAATACAGTCCAGACA | + |
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Preference number: 2 (lower is better) Translates to: DIRTSLNCLHIQQAICQNSLHKT*TNTVQT Trigger: TGTCTGGACTGTATTTGTGCAGGTCTTGTGCAAGCT...ATTTTGGCAGATAGCTTGTTGAATGTGTAGGCAGTTTAGAGAAGTCCTGATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR CCA 90 bp | GACATCAGGACTTCTCTAAACTGCCTACACATTCAACAAGCTATCTGCCAAAATATTTACAGTAGCAAGTaGGATTGGGAACCTTCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: DIRTSLNCLHIQQAICQNIYSSK*DWEPSS Trigger: GCTTGAAGGTTCCCAATCCCACTTGCTACTGTAAAT...ATTTTGGCAGATAGCTTGTTGAATGTGTAGGCAGTTTAGAGAAGTCCTGATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR TCA 90 bp | GACATCAGGACTTCTCTAAACTGCCTACACATTCAACAAGCTATCTGCCAAAATCAGAGACATAGAACATaGAGTTGGTTGAGAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: DIRTSLNCLHIQQAICQNQRHRT*SWLRKE Trigger: TTCCTTTCTCAACCAACTTCATGTTCTATGTCTCTG...ATTTTGGCAGATAGCTTGTTGAATGTGTAGGCAGTTTAGAGAAGTCCTGATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGTTGTGTGCAACCTAACATGGTTTTTCTTCAATGAAGGTTTTCATGGACATAGCTTGCACAAGACCTaGACAAATACAGTCCAGACA | + |
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Preference number: 2 (lower is better) Translates to: SVVCNLTWFFFNEGFHGHSLHKT*TNTVQT Trigger: TGTCTGGACTGTATTTGTGCAGGTCTTGTGCAAGCT...ATGTCCATGAAAACCTTCATTGAAGAAAAACCATGTTAGGTTGCACACAACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR GCA 90 bp | GACATCAGGACTTCTCTAAACTGCCTACACATTCAACAAGCTATCTGCCAAAATAAACACAAAGTTCCATaGCTACTCAGAAGCTATGTA | + |
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Preference number: 2 (lower is better) Translates to: DIRTSLNCLHIQQAICQNKHKVP*LLRSYV Trigger: TACATAGCTTCTGAGTAGGCATGGAACTTTGTGTTT...ATTTTGGCAGATAGCTTGTTGAATGTGTAGGCAGTTTAGAGAAGTCCTGATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR GCA 90 bp | GACATCAGGACTTCTCTAAACTGCCTACACATTCAACAAGCTATCTGCCAAAATAATGACTCCTTTCAATaGTCAGGGAACTATGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: DIRTSLNCLHIQQAICQNNDSFQ*SGNYVE Trigger: TTCTACATAGTTCCCTGAGCATTGAAAGGAGTCATT...ATTTTGGCAGATAGCTTGTTGAATGTGTAGGCAGTTTAGAGAAGTCCTGATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR CCA 90 bp | CACATTCAACAAGCTATCTGCCAAAATGCATCCTATTTTGGAAATATTGTTTGCAGTAGCAAGTGGGATTaGGAACCTTCAAGCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: HIQQAICQNASYFGNIVCSSKWD*EPSSRN Trigger: GTTTCTGCTTGAAGGTTCCCAATCCCACTTGCTACT...GCAAACAATATTTCCAAAATAGGATGCATTTTGGCAGATAGCTTGTTGAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR TCA 90 bp | CACATTCAACAAGCTATCTGCCAAAATGCATCCTATTTTGGAAATATTGTTTGCTTGACCAACAGAAAATaGACTCCATGGGTTTGGATT | + |
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Preference number: 2 (lower is better) Translates to: HIQQAICQNASYFGNIVCLTNRK*TPWVWI Trigger: AATCCAAACCCATGGAGTTCATTTTCTGTTGGTCAA...GCAAACAATATTTCCAAAATAGGATGCATTTTGGCAGATAGCTTGTTGAATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR GCA 90 bp | CACATTCAACAAGCTATCTGCCAAAATGCATCCTATTTTGGAAATATTGTTTGCTGCAGGCAGCTATACTaGATGCAAAATTTGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: HIQQAICQNASYFGNIVCCRQLY*MQNLTK Trigger: CTTTGTCAAATTTTGCATGCAGTATAGCTGCCTGCA...GCAAACAATATTTCCAAAATAGGATGCATTTTGGCAGATAGCTTGTTGAATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTGTGTGCAACCTAACATGGTTTTTCTTCAATGAAGGTTTTCATGGACATCAAAGCCTGCTTCAGTaGTACCTAGTAATAAATCAA | + |
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Preference number: 2 (lower is better) Translates to: SVVCNLTWFFFNEGFHGHQSLLQ*YLVINQ Trigger: TTGATTTATTACTAGGTACCACTGAAGCAGGCTTTG...ATGTCCATGAAAACCTTCATTGAAGAAAAACCATGTTAGGTTGCACACAACTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR GCA 90 bp | CACATTCAACAAGCTATCTGCCAAAATGCATCCTATTTTGGAAATATTGTTTGCAATGACTCCTTTCAATaGTCAGGGAACTATGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: HIQQAICQNASYFGNIVCNDSFQ*SGNYVE Trigger: TTCTACATAGTTCCCTGAGCATTGAAAGGAGTCATT...GCAAACAATATTTCCAAAATAGGATGCATTTTGGCAGATAGCTTGTTGAATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR GCA 72 bp | CCAATTCACAGAGACTGTGAGAGCTTGCACAAGACCTaGACAAATACAGTCCAGACAAAAGTCCCAGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: PIHRDCESLHKT*TNTVQTKVPVL Trigger: TAGCACTGGGACTTTTGTCTGGACTGTATTTGTGCAGGTCTTGTGCAAGCTCTCACAGTCTCTGTGAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR TCA 72 bp | GGACTGGCTTCATGCCTAAAGTTGACCAACAGAAAATaGACTCCATGGGTTTGGATTGTTGGAGGAGAACCT | + |
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Preference number: 3 (lower is better) Translates to: GLASCLKLTNRK*TPWVWIVGGEP Trigger: AGGTTCTCCTCCAACAATCCAAACCCATGGAGTTCATTTTCTGTTGGTCAACTTTAGGCATGAAGCCAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR TCA 72 bp | TCTGACACTGGTTCACATACCAATTCACAGAGACTGTaGGAGCTTGCACAAGACCTGCACAAATACAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: SDTGSHTNSQRL*ELAQDLHKYSP Trigger: TGGACTGTATTTGTGCAGGTCTTGTGCAAGCTCTCACAGTCTCTGTGAATTGGTATGTGAACCAGTGTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR GCA 72 bp | TGGACATTTGCAATTACTGAGGCTCTTTTCTCAGAGTaGAGCTCAATGGGCCATGAGGTGATTATGGCCATT | + |
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Preference number: 3 (lower is better) Translates to: WTFAITEALFSE*SSMGHEVIMAI Trigger: AATGGCCATAATCACCTCATGGCCCATTGAGCTGCACTCTGAGAAAAGAGCCTCAGTAATTGCAAATGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR CAA 90 bp | TCACTTAATGACTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGGCGTTTTCCTTTGTTTaGCTGGTTTTTCTTTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: SLNDSFQCSGNYVEEEVEAFSFV*LVFLWG Trigger: CCCCCAAAGAAAAACCAGCAAAACAAAGGAAAACGC...CTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAGTCATTAAGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR GCA 72 bp | TGGTTCACATACCAATTCACAGAGACTGTGAGAGCTTaGACAAGACCTGCACAAATACAGTCCAGACAAAAG | + |
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Preference number: 3 (lower is better) Translates to: WFTYQFTETVRA*TRPAQIQSRQK Trigger: CTTTTGTCTGGACTGTATTTGTGCAGGTCTTGTGCAAGCTCTCACAGTCTCTGTGAATTGGTATGTGAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR CAA 90 bp | TCACTTAATGACTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGTTGGAGGAGAACCTTTaGTTTCATTTTGTTTGCGTT | + |
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Preference number: 3 (lower is better) Translates to: SLNDSFQCSGNYVEEEVELEENL*FHFVCV Trigger: AACGCAAACAAAATGAAACAAAAGGTTCTCCTCCAA...CTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAGTCATTAAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR CAA 90 bp | GACATCAGGACTTCTCTAAACTGCCTACACATTCAACAAGCTATCTGCCAAAATATGGGGAATATTTTGTaGCTTTCCAAAGCCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: DIRTSLNCLHIQQAICQNMGNIL*LSKACF Trigger: GAAGCAGGCTTTGGAAAGCAACAAAATATTCCCCAT...ATTTTGGCAGATAGCTTGTTGAATGTGTAGGCAGTTTAGAGAAGTCCTGATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR CAA 90 bp | CACATTCAACAAGCTATCTGCCAAAATGCATCCTATTTTGGAAATATTGTTTGCGCGTTTTCCTTTGTTTaGCTGGTTTTTCTTTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: HIQQAICQNASYFGNIVCAFSFV*LVFLWG Trigger: CCCCCAAAGAAAAACCAGCAAAACAAAGGAAAACGC...GCAAACAATATTTCCAAAATAGGATGCATTTTGGCAGATAGCTTGTTGAATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR GCA 72 bp | TTAAATGGAATATCTTCACTTAATGACTCCTTTCAATaGTCAGGGAACTATGTAGAAGAGGAGGTGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LNGISSLNDSFQ*SGNYVEEEVER Trigger: TCTCTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAGTCATTAAGTGAAGATATTCCATTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR-3UTR CAA 90 bp | CACATTCAACAAGCTATCTGCCAAAATGCATCCTATTTTGGAAATATTGTTTGCTTGGAGGAGAACCTTTaGTTTCATTTTGTTTGCGTT | + |
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Preference number: 3 (lower is better) Translates to: HIQQAICQNASYFGNIVCLEENL*FHFVCV Trigger: AACGCAAACAAAATGAAACAAAAGGTTCTCCTCCAA...GCAAACAATATTTCCAAAATAGGATGCATTTTGGCAGATAGCTTGTTGAATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR GCA 72 bp | GCTAAATCCCTATATACTGAGACTGATTCAGTTGTGTaGAACCTAACATGGTTTTTCTTCAATGAAGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: AKSLYTETDSVV*NLTWFFFNEGF Trigger: AAAACCTTCATTGAAGAAAAACCATGTTAGGTTGCACACAACTGAATCAGTCTCAGTATATAGGGATTTAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| CDS-3UTR TCA 90 bp | TCACTTAATGACTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGCTCCCTTCCTTACTGTaGTTCTGGAGAGATCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: SLNDSFQCSGNYVEEEVELPSLL*FWRDLR Trigger: CCTAAGATCTCTCCAGAATCACAGTAAGGAAGGGAG...CTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAGTCATTAAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| CDS-3UTR CCA 90 bp | TCACTTAATGACTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGTGCTCTATAAAGAGCTaGCTTATGCAAGCTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SLNDSFQCSGNYVEEEVECSIKS*LMQALK Trigger: CTTCAGAGCTTGCATAAGCCAGCTCTTTATAGAGCA...CTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAGTCATTAAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| CDS-3UTR GCA 90 bp | CTCCTTTCAATGCTCAGGGAACTATGTAGAAGAGGAGGTGGAGAGAATGTAAGCGGACTTAACATTTTCTaGAGGAGCTTTTCCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: LLSMLRELCRRGGGENVSGLNIF*RSFSIE Trigger: TTCTATGGAAAAGCTCCTGCAGAAAATGTTAAGTCC...GCTTACATTCTCTCCACCTCCTCTTCTACATAGTTCCCTGAGCATTGAAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| CDS-3UTR TCA 90 bp | TCAGTTGTGTGCAACCTAACATGGTTTTTCTTCAATGAAGGTTTTCATGGACATCTCCCTTCCTTACTGTaGTTCTGGAGAGATCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: SVVCNLTWFFFNEGFHGHLPSLL*FWRDLR Trigger: CCTAAGATCTCTCCAGAATCACAGTAAGGAAGGGAG...ATGTCCATGAAAACCTTCATTGAAGAAAAACCATGTTAGGTTGCACACAACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| CDS-3UTR TCA 90 bp | CACATTCAACAAGCTATCTGCCAAAATGCATCCTATTTTGGAAATATTGTTTGCCTCCCTTCCTTACTGTaGTTCTGGAGAGATCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: HIQQAICQNASYFGNIVCLPSLL*FWRDLR Trigger: CCTAAGATCTCTCCAGAATCACAGTAAGGAAGGGAG...GCAAACAATATTTCCAAAATAGGATGCATTTTGGCAGATAGCTTGTTGAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| CDS-3UTR TCA 90 bp | TCAGTTGTGTGCAACCTAACATGGTTTTTCTTCAATGAAGGTTTTCATGGACATAGAGAAAAACCACAGTaGTATGGGAAATGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SVVCNLTWFFFNEGFHGHREKPQ*YGKCRW Trigger: CCACCTGCATTTCCCATATCACTGTGGTTTTTCTCT...ATGTCCATGAAAACCTTCATTGAAGAAAAACCATGTTAGGTTGCACACAACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| CDS-3UTR TCA 90 bp | CACATTCAACAAGCTATCTGCCAAAATGCATCCTATTTTGGAAATATTGTTTGCAGAGAAAAACCACAGTaGTATGGGAAATGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HIQQAICQNASYFGNIVCREKPQ*YGKCRW Trigger: CCACCTGCATTTCCCATATCACTGTGGTTTTTCTCT...GCAAACAATATTTCCAAAATAGGATGCATTTTGGCAGATAGCTTGTTGAATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| CDS-3UTR CCA 90 bp | TCAGTTGTGTGCAACCTAACATGGTTTTTCTTCAATGAAGGTTTTCATGGACATTGCTCTATAAAGAGCTaGCTTATGCAAGCTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SVVCNLTWFFFNEGFHGHCSIKS*LMQALK Trigger: CTTCAGAGCTTGCATAAGCCAGCTCTTTATAGAGCA...ATGTCCATGAAAACCTTCATTGAAGAAAAACCATGTTAGGTTGCACACAACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| CDS-3UTR GCA 90 bp | CACATTCAACAAGCTATCTGCCAAAATGCATCCTATTTTGGAAATATTGTTTGCGGACTTAACATTTTCTaGAGGAGCTTTTCCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: HIQQAICQNASYFGNIVCGLNIF*RSFSIE Trigger: TTCTATGGAAAAGCTCCTGCAGAAAATGTTAAGTCC...GCAAACAATATTTCCAAAATAGGATGCATTTTGGCAGATAGCTTGTTGAATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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| 3UTR CAA 72 bp | GAGGTGATTATGGCCATTTCAAGTAAACTCAAAGACTaGTTAGTGGGAGAAGCTTTACAAACAGATTTGATT | + |
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Preference number: 4 (lower is better) Translates to: EVIMAISSKLKD*LVGEALQTDLI Trigger: AATCAAATCTGTTTGTAAAGCTTCTCCCACTAACAAGTCTTTGAGTTTACTTGAAATGGCCATAATCACCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213484.2 ENSMUST00000215185.2 ENSMUST00000215988.2 |
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