Pregenerated sensors for OLFR1250 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075078Ensembl transcript IDs: ENSMUST00000111527.4, ENSMUST00000215730.3
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCCTAGCAAAAACATAAGTGGATGCTCACAGTCAGCTATTGGATaGGTCACACGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GPSKNISGCSQSAIG*VTRPPMEELEKVPK Trigger: CTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCGTGTGACCCATCCAATAGCTGACTGTGAGCATCCACTTATGTTTTTGCTAGGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CCA 90 bp | ACCAATACCCCAGAGCTCTTGTCTAGCTGCATATGTATCAAAAGATaGCCTAGTCAGCCATCACTAGAAAGAGAGGCCCTTTGGACTTGC | + |
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Preference number: 1 (lower is better) Translates to: TNTPELLSSCICIKR*PSQPSLEREALWTC Trigger: GCAAGTCCAAAGGGCCTCTCTTTCTAGTGATGGCTGACTAGGCCATCTTTTGATACATATGCAGCTAGACAAGAGCTCTGGGGTATTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CCA 90 bp | TCTTCCTTAGTGTTTCTACTGAAACTGGGGCTATCCCTTCACGAGTaGCCATTCCTTGTCACTCATAGCACCAAATCCCAGCATCTCAAT | + |
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Preference number: 1 (lower is better) Translates to: SSLVFLLKLGLSLHE*PFLVTHSTKSQHLN Trigger: ATTGAGATGCTGGGATTTGGTGCTATGAGTGACAAGGAATGGCCACTCGTGAAGGGATAGCCCCAGTTTCAGTAGAAACACTAAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR TCA 90 bp | ACAGCCCGGGTTCCTTCTGGGTCAGAGCTTCTAAGTACTGATCACTaGAATAGTTCCCAGAAGACTTTGCCTATTATGCTGGTCTCTTTT | + |
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Preference number: 1 (lower is better) Translates to: TARVPSGSELLSTDH*NSSQKTLPIMLVSF Trigger: AAAAGAGACCAGCATAATAGGCAAAGTCTTCTGGGAACTATTTCAGTGATCAGTACTTAGAAGCTCTGACCCAGAAGGAACCCGGGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR GCA 90 bp | CTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGAAGGACACATaGTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: LGIYPEDVPTGKKDT*STMFIAALFIIARS Trigger: GCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGTTGGGACATCTTCTGGATATATGCCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CCA 90 bp | TGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGATGCCCCACAACAGAGGAATGGATACAGAAA | + |
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Preference number: 1 (lower is better) Translates to: CSTMFIAALFIIARS*KEPRCPTTEEWIQK Trigger: TTTCTGTATCCATTCCTCTGTTGTGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CCA 90 bp | AAATGGGAACAAAACACCCATGGAAGGAGTAACAGAGACAAAATTTaGAGCTGTGATGAAAGGATGCACCATCTAGTGATTGCCATATCC | + |
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Preference number: 1 (lower is better) Translates to: KWEQNTHGRSNRDKI*SCDERMHHLVIAIS Trigger: GGATATGGCAATCACTAGATGGTGCATCCTTTCATCACAGCTCCAAATTTTGTCTCTGTTACTCCTTCCATGGGTGTTTTGTTCCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR TCA 90 bp | AATTCAAACTATTACATAATGTTGGATACATTCTTTACTTCCCTCTaGAACTTCACAAGCCAAGCCTTCATCATCAGCATTACTCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: NSNYYIMLDTFFTSL*NFTSQAFIISITPN Trigger: GTTGGGAGTAATGCTGATGATGAAGGCTTGGCTTGTGAAGTTTCAGAGGGAAGTAAAGAATGTATCCAACATTATGTAATAGTTTGAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCACGAGTGGCCATTCCTTGTCACTCATAGCACCAAATCCCAGCATCTCAAGCCCGGGTTCCTTCTaGGTCAGAGCTTCTAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: PFTSGHSLSLIAPNPSISSPGSF*VRASKY Trigger: GTACTTAGAAGCTCTGACCCAGAAGGAACCCGGGCT...TGAGATGCTGGGATTTGGTGCTATGAGTGACAAGGAATGGCCACTCGTGAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCACGAGTGGCCATTCCTTGTCACTCATAGCACCAAATCCCAGCATCTCAGCACCATCTAGTGATTaGCATATCCAGGGATCCATC | + |
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Preference number: 2 (lower is better) Translates to: PFTSGHSLSLIAPNPSISAPSSD*HIQGSI Trigger: GATGGATCCCTGGATATGGCAATCACTAGATGGTGC...TGAGATGCTGGGATTTGGTGCTATGAGTGACAAGGAATGGCCACTCGTGAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CAA 90 bp | GCGAGGATGTGGAGAAAGAGGAACACTCCTACATTGTTGATGGGATaGCAAGCATGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ARMWRKRNTPTLLMG*QACTTTLEISLAVP Trigger: AGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACATGCTTGCAATCCCATCAACAATGTAGGAGTGTTCCTCTTTCTCCACATCCTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR GCA 90 bp | TGGATGGACCTGGAAGGCATCATCCTGAGTGAGGTAACCCAATCACAAAGGAACGGAGCTAAAGGGAACTaGAACCCTATAGGTGGAACA | + |
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Preference number: 2 (lower is better) Translates to: WMDLEGIILSEVTQSQRNGAKGN*NPIGGT Trigger: TGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCC...GTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCCTTCCAGGTCCATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR GCA 90 bp | TGGATGGACCTGGAAGGCATCATCCTGAGTGAGGTAACCCAATCACAAAGGAACGCACCATCTAGTGATTaGCATATCCAGGGATCCATC | + |
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Preference number: 2 (lower is better) Translates to: WMDLEGIILSEVTQSQRNAPSSD*HIQGSI Trigger: GATGGATCCCTGGATATGGCAATCACTAGATGGTGC...GTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCCTTCCAGGTCCATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR GCA 90 bp | CCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAACTGCAACCCTAGAGGCCCTTTGGACTTaGAAATTTTATATGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PMEELEKVPKELKGTATLEALWT*KFYMPQ Trigger: CTGGGGCATATAAAATTTGCAAGTCCAAAGGGCCTC...TAGGGTTGCAGTTCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCACGAGTGGCCATTCCTTGTCACTCATAGCACCAAATCCCAGCATCTCAGTCCTCACTGATAAGTaGATATTAGCCCAGAAACTT | + |
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Preference number: 2 (lower is better) Translates to: PFTSGHSLSLIAPNPSISVLTDK*ILAQKL Trigger: AAGTTTCTGGGCTAATATCCACTTATCAGTGAGGAC...TGAGATGCTGGGATTTGGTGCTATGAGTGACAAGGAATGGCCACTCGTGAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCACGAGTGGCCATTCCTTGTCACTCATAGCACCAAATCCCAGCATCTCAATTTGCAATGCATGGTaGTTTCATACTACACTATGC | + |
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Preference number: 2 (lower is better) Translates to: PFTSGHSLSLIAPNPSISICNAW*FHTTLC Trigger: GCATAGTGTAGTATGAAATCACCATGCATTGCAAAT...TGAGATGCTGGGATTTGGTGCTATGAGTGACAAGGAATGGCCACTCGTGAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR GCA 90 bp | CCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAACTGCAACCCTAGAGCTCTTGTCTAGCTaGATATGTATCAAAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: PMEELEKVPKELKGTATLELLSS*ICIKRW Trigger: CCATCTTTTGATACATATGCAGCTAGACAAGAGCTC...TAGGGTTGCAGTTCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR TCA 90 bp | AACATCCTTAATCATCTGGAAATGCACATCAAAACAACCCTGAGATTCCACCTCGATCAAAAATTCAGGTaGCAGCAGATGCTGGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: NILNHLEMHIKTTLRFHLDQKFR*QQMLAR Trigger: CCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATC...GAGGTGGAATCTCAGGGTTGTTTTGATGTGCATTTCCAGATGATTAAGGATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CCA 90 bp | GATCATTTCATGGTTTCAAAACCTGTACCATCTAGGAAACCCTACATATCCTCAAGCCCGGGTTCCTTCTaGGTCAGAGCTTCTAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: DHFMVSKPVPSRKPYISSSPGSF*VRASKY Trigger: GTACTTAGAAGCTCTGACCCAGAAGGAACCCGGGCT...TGAGGATATGTAGGGTTTCCTAGATGGTACAGGTTTTGAAACCATGAAATGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CCA 90 bp | AACATCCTTAATCATCTGGAAATGCACATCAAAACAACCCTGAGATTCCACCTCGCCCCTTCAAAGAAATaGGAACAAAACACCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: NILNHLEMHIKTTLRFHLAPSKK*EQNTHG Trigger: TCCATGGGTGTTTTGTTCCCATTTCTTTGAAGGGGC...GAGGTGGAATCTCAGGGTTGTTTTGATGTGCATTTCCAGATGATTAAGGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR TCA 90 bp | GATCATTTCATGGTTTCAAAACCTGTACCATCTAGGAAACCCTACATATCCTCAGTCAGGACACAAACCTaGAACAAGAGTCTAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: DHFMVSKPVPSRKPYISSVRTQT*NKSLES Trigger: TGACTCTAGACTCTTGTTTCAGGTTTGTGTCCTGAC...TGAGGATATGTAGGGTTTCCTAGATGGTACAGGTTTTGAAACCATGAAATGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR GCA 90 bp | GATCATTTCATGGTTTCAAAACCTGTACCATCTAGGAAACCCTACATATCCTCAGAGGCCCTTTGGACTTaGAAATTTTATATGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: DHFMVSKPVPSRKPYISSEALWT*KFYMPQ Trigger: CTGGGGCATATAAAATTTGCAAGTCCAAAGGGCCTC...TGAGGATATGTAGGGTTTCCTAGATGGTACAGGTTTTGAAACCATGAAATGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCAAGAAGAACGAAGACCAAAGTGTAGACACTTTGCCCCTTCAAAGAAATGGGAGCTCTTGTCTAGCTaGATATGTATCAAAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: TQEERRPKCRHFAPSKKWELLSS*ICIKRW Trigger: CCATCTTTTGATACATATGCAGCTAGACAAGAGCTC...CCATTTCTTTGAAGGGGCAAAGTGTCTACACTTTGGTCTTCGTTCTTCTTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCATCTCAATGATCATTTCATGGTTTCAAAACCTGTACCATCTAGGAAACCCGTCCTCACTGATAAGTaGATATTAGCCCAGAAACTT | + |
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Preference number: 2 (lower is better) Translates to: QHLNDHFMVSKPVPSRKPVLTDK*ILAQKL Trigger: AAGTTTCTGGGCTAATATCCACTTATCAGTGAGGAC...GGGTTTCCTAGATGGTACAGGTTTTGAAACCATGAAATGATCATTGAGATGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCCAAGCCAATTCTTCAGCTATAACATCCCAGAACCACAGATTCTTAATTATTTGCAATGCATGGTaGTTTCATACTACACTATGC | + |
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Preference number: 2 (lower is better) Translates to: QSQANSSAITSQNHRFLIICNAW*FHTTLC Trigger: GCATAGTGTAGTATGAAATCACCATGCATTGCAAAT...AATTAAGAATCTGTGGTTCTGGGATGTTATAGCTGAAGAATTGGCTTGGCTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCCAAGCCAATTCTTCAGCTATAACATCCCAGAACCACAGATTCTTAATTAATTTGCTAAACGCATaGAACTCAAGAAGAACGAAG | + |
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Preference number: 2 (lower is better) Translates to: QSQANSSAITSQNHRFLINLLNA*NSRRTK Trigger: CTTCGTTCTTCTTGAGTTTCATGCGTTTAGCAAATT...AATTAAGAATCTGTGGTTCTGGGATGTTATAGCTGAAGAATTGGCTTGGCTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCATCTCAATGATCATTTCATGGTTTCAAAACCTGTACCATCTAGGAAACCCTTGTTTTACCATAGCTaGCCAATAGAAATTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: QHLNDHFMVSKPVPSRKPLFYHS*PIEIVP Trigger: TGGGACAATTTCTATTGGTCAGCTATGGTAAAACAA...GGGTTTCCTAGATGGTACAGGTTTTGAAACCATGAAATGATCATTGAGATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CCA 90 bp | AACATCCTTAATCATCTGGAAATGCACATCAAAACAACCCTGAGATTCCACCTCGAAAGAGAGGCCCTTTaGACTTGCAAATTTTATATG | + |
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Preference number: 2 (lower is better) Translates to: NILNHLEMHIKTTLRFHLEREAL*TCKFYM Trigger: CATATAAAATTTGCAAGTCCAAAGGGCCTCTCTTTC...GAGGTGGAATCTCAGGGTTGTTTTGATGTGCATTTCCAGATGATTAAGGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR TCA 90 bp | ATGATCATTTCATGGTTTCAAAACCTGTACCATCTAGGAAACCCTACATATCCTAATTTGCTAAACGCATaGAACTCAAGAAGAACGAAG | + |
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Preference number: 2 (lower is better) Translates to: MIISWFQNLYHLGNPTYPNLLNA*NSRRTK Trigger: CTTCGTTCTTCTTGAGTTTCATGCGTTTAGCAAATT...AGGATATGTAGGGTTTCCTAGATGGTACAGGTTTTGAAACCATGAAATGATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCCCAACATTCTTATTTTCCAAGATCTCATAGATCACTCTATTGATCTCTCAAGGAAAGTGTTTATTTaGTCTTACAGTTGTAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: TPNILIFQDLIDHSIDLSRKVFI*SYSCSP Trigger: TGGACTACAACTGTAAGACCAAATAAACACTTTCCT...TGAGAGATCAATAGAGTGATCTATGAGATCTTGGAAAATAAGAATGTTGGGAGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CCA 72 bp | GTGTTTCTACTGAAACTGGGGCTATCCCTTCACGAGTaGCCATTCCTTGTCACTCATAGCACCAAATCCCAG | + |
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Preference number: 3 (lower is better) Translates to: VFLLKLGLSLHE*PFLVTHSTKSQ Trigger: CTGGGATTTGGTGCTATGAGTGACAAGGAATGGCCACTCGTGAAGGGATAGCCCCAGTTTCAGTAGAAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CCA 72 bp | AAAAACATAAGTGGATGCTCACAGTCAGCTATTGGATaGGTCACACGGCCCCCAATGGAGGAGCTAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: KNISGCSQSAIG*VTRPPMEELEK Trigger: TTTCTCTAGCTCCTCCATTGGGGGCCGTGTGACCCATCCAATAGCTGACTGTGAGCATCCACTTATGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR TCA 72 bp | AGGCAAATGGATGGACCTGGAAGGCATCATCCTGAGTaGGGTAACCCAATCACAAAGGAACTCGCACAATAT | + |
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Preference number: 3 (lower is better) Translates to: RQMDGPGRHHPE*GNPITKELAQY Trigger: ATATTGTGCGAGTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCCTTCCAGGTCCATCCATTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CCA 72 bp | CCAGAGCTCTTGTCTAGCTGCATATGTATCAAAAGATaGCCTAGTCAGCCATCACTAGAAAGAGAGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: PELLSSCICIKR*PSQPSLEREAL Trigger: AAGGGCCTCTCTTTCTAGTGATGGCTGACTAGGCCATCTTTTGATACATATGCAGCTAGACAAGAGCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CAA 90 bp | TGGATGGACCTGGAAGGCATCATCCTGAGTGAGGTAACCCAATCACAAAGGAACCAAACGCTGACACTATaGCATACACTAGCAAGATTT | + |
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Preference number: 3 (lower is better) Translates to: WMDLEGIILSEVTQSQRNQTLTL*HTLARF Trigger: AAATCTTGCTAGTGTATGCAATAGTGTCAGCGTTTG...GTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCCTTCCAGGTCCATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CCA 72 bp | ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGATGCCCCACAACAGAGGAATGG | + |
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Preference number: 3 (lower is better) Translates to: MFIAALFIIARS*KEPRCPTTEEW Trigger: CCATTCCTCTGTTGTGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR TCA 72 bp | GTTCCTTCTGGGTCAGAGCTTCTAAGTACTGATCACTaGAATAGTTCCCAGAAGACTTTGCCTATTATGCTG | + |
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Preference number: 3 (lower is better) Translates to: VPSGSELLSTDH*NSSQKTLPIML Trigger: CAGCATAATAGGCAAAGTCTTCTGGGAACTATTTCAGTGATCAGTACTTAGAAGCTCTGACCCAGAAGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CAA 90 bp | AACATCCTTAATCATCTGGAAATGCACATCAAAACAACCCTGAGATTCCACCTCAGAGGCCCTTTGGACTaGCAAATTTTATATGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: NILNHLEMHIKTTLRFHLRGPLD*QILYAP Trigger: TGGGGCATATAAAATTTGCAAGTCCAAAGGGCCTCT...GAGGTGGAATCTCAGGGTTGTTTTGATGTGCATTTCCAGATGATTAAGGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CAA 90 bp | CAGAGCCAAGCCAATTCTTCAGCTATAACATCCCAGAACCACAGATTCTTAATTAATACCCCAGAGCTCTaGTCTAGCTGCATATGTATC | + |
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Preference number: 3 (lower is better) Translates to: QSQANSSAITSQNHRFLINTPEL*SSCICI Trigger: GATACATATGCAGCTAGACAAGAGCTCTGGGGTATT...AATTAAGAATCTGTGGTTCTGGGATGTTATAGCTGAAGAATTGGCTTGGCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CAA 90 bp | AACATCCTTAATCATCTGGAAATGCACATCAAAACAACCCTGAGATTCCACCTCCAAAGTGTAGACACTTaGCCCCTTCAAAGAAATGGG | + |
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Preference number: 3 (lower is better) Translates to: NILNHLEMHIKTTLRFHLQSVDT*PLQRNG Trigger: CCCATTTCTTTGAAGGGGCAAAGTGTCTACACTTTG...GAGGTGGAATCTCAGGGTTGTTTTGATGTGCATTTCCAGATGATTAAGGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCATCTCAATGATCATTTCATGGTTTCAAAACCTGTACCATCTAGGAAACCCAGTTCCCAGAAGACTTaGCCTATTATGCTGGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: QHLNDHFMVSKPVPSRKPSSQKT*PIMLVS Trigger: AGAGACCAGCATAATAGGCAAAGTCTTCTGGGAACT...GGGTTTCCTAGATGGTACAGGTTTTGAAACCATGAAATGATCATTGAGATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CCA 72 bp | CAAAACACCCATGGAAGGAGTAACAGAGACAAAATTTaGAGCTGTGATGAAAGGATGCACCATCTAGTGATT | + |
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Preference number: 3 (lower is better) Translates to: QNTHGRSNRDKI*SCDERMHHLVI Trigger: AATCACTAGATGGTGCATCCTTTCATCACAGCTCCAAATTTTGTCTCTGTTACTCCTTCCATGGGTGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CAA 90 bp | GATCATTTCATGGTTTCAAAACCTGTACCATCTAGGAAACCCTACATATCCTCAAAGCATTCAGGGACTTaGCTTAGGATCTTTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: DHFMVSKPVPSRKPYISSKHSGT*LRIFLS Trigger: AGAGAGAAAGATCCTAAGCAAAGTCCCTGAATGCTT...TGAGGATATGTAGGGTTTCCTAGATGGTACAGGTTTTGAAACCATGAAATGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CCA 72 bp | ATAGCACCAAATCCCAGCATCTCAATGATCATTTCATaGTTTCAAAACCTGTACCATCTAGGAAACCCTACA | + |
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Preference number: 3 (lower is better) Translates to: IAPNPSISMIIS*FQNLYHLGNPT Trigger: TGTAGGGTTTCCTAGATGGTACAGGTTTTGAAACCATGAAATGATCATTGAGATGCTGGGATTTGGTGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CAA 90 bp | ACTCCCAACATTCTTATTTTCCAAGATCTCATAGATCACTCTATTGATCTCTCAAGAGGCCCTTTGGACTaGCAAATTTTATATGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: TPNILIFQDLIDHSIDLSRGPLD*QILYAP Trigger: TGGGGCATATAAAATTTGCAAGTCCAAAGGGCCTCT...TGAGAGATCAATAGAGTGATCTATGAGATCTTGGAAAATAAGAATGTTGGGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCATCTCAATGATCATTTCATGGTTTCAAAACCTGTACCATCTAGGAAACCCAGAAAGAGAGGCCCTTaGGACTTGCAAATTTTATAT | + |
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Preference number: 3 (lower is better) Translates to: QHLNDHFMVSKPVPSRKPRKRGP*DLQILY Trigger: ATATAAAATTTGCAAGTCCAAAGGGCCTCTCTTTCT...GGGTTTCCTAGATGGTACAGGTTTTGAAACCATGAAATGATCATTGAGATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CAA 90 bp | CAGAGCCAAGCCAATTCTTCAGCTATAACATCCCAGAACCACAGATTCTTAATTAGAAAGAGAGGCCCTTaGGACTTGCAAATTTTATAT | + |
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Preference number: 3 (lower is better) Translates to: QSQANSSAITSQNHRFLIRKRGP*DLQILY Trigger: ATATAAAATTTGCAAGTCCAAAGGGCCTCTCTTTCT...AATTAAGAATCTGTGGTTCTGGGATGTTATAGCTGAAGAATTGGCTTGGCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR-3UTR CAA 90 bp | ACTCCCAACATTCTTATTTTCCAAGATCTCATAGATCACTCTATTGATCTCTCACAAACGCTGACACTATaGCATACACTAGCAAGATTT | + |
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Preference number: 3 (lower is better) Translates to: TPNILIFQDLIDHSIDLSQTLTL*HTLARF Trigger: AAATCTTGCTAGTGTATGCAATAGTGTCAGCGTTTG...TGAGAGATCAATAGAGTGATCTATGAGATCTTGGAAAATAAGAATGTTGGGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CAA 72 bp | CCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATaGGACATAGTACTACCGGAGGATCCCGCAATACCT | + |
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Preference number: 4 (lower is better) Translates to: PLWKSVWRFLRK*DIVLPEDPAIP Trigger: AGGTATTGCGGGATCCTCCGGTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| CDS-3UTR TCA 90 bp | CCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAACTGCAACCCTATATTGCCAACTACAGTaGGTCCAAGGAAATAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PMEELEKVPKELKGTATLYCQLQ*VQGNRC Trigger: ACACCTATTTCCTTGGACTCACTGTAGTTGGCAATA...TAGGGTTGCAGTTCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| 3UTR CAA 72 bp | AAACTCAAGAAGAACGAAGACCAAAGTGTAGACACTTaGCCCCTTCAAAGAAATGGGAACAAAACACCCATG | + |
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Preference number: 4 (lower is better) Translates to: KLKKNEDQSVDT*PLQRNGNKTPM Trigger: CATGGGTGTTTTGTTCCCATTTCTTTGAAGGGGCAAAGTGTCTACACTTTGGTCTTCGTTCTTCTTGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| CDS-3UTR TCA 90 bp | CAGAGCCAAGCCAATTCTTCAGCTATAACATCCCAGAACCACAGATTCTTAATTTATTGCCAACTACAGTaGGTCCAAGGAAATAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: QSQANSSAITSQNHRFLIYCQLQ*VQGNRC Trigger: ACACCTATTTCCTTGGACTCACTGTAGTTGGCAATA...AATTAAGAATCTGTGGTTCTGGGATGTTATAGCTGAAGAATTGGCTTGGCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| CDS-3UTR CAA 90 bp | CCCTTCACGAGTGGCCATTCCTTGTCACTCATAGCACCAAATCCCAGCATCTCAGACATTGCTCCATTATaGCCAACTACAGTGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: PFTSGHSLSLIAPNPSISDIAPL*PTTVSP Trigger: TGGACTCACTGTAGTTGGCAATAATGGAGCAATGTC...TGAGATGCTGGGATTTGGTGCTATGAGTGACAAGGAATGGCCACTCGTGAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| CDS-3UTR CAA 90 bp | TGGATGGACCTGGAAGGCATCATCCTGAGTGAGGTAACCCAATCACAAAGGAACGACATTGCTCCATTATaGCCAACTACAGTGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: WMDLEGIILSEVTQSQRNDIAPL*PTTVSP Trigger: TGGACTCACTGTAGTTGGCAATAATGGAGCAATGTC...GTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCCTTCCAGGTCCATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| CDS-3UTR CAA 90 bp | AATATGCCGGGGCCTAGCAAAAACATAAGTGGATGCTCACAGTCAGCTATTGGAAAATCTGTAAGCAACTaGGGCAAGATGGCAGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: NMPGPSKNISGCSQSAIGKSVSN*GKMAVE Trigger: TTCTACTGCCATCTTGCCCAAGTTGCTTACAGATTT...TCCAATAGCTGACTGTGAGCATCCACTTATGTTTTTGCTAGGCCCCGGCATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| CDS-3UTR CAA 90 bp | GATCATTTCATGGTTTCAAAACCTGTACCATCTAGGAAACCCTACATATCCTCAGATGAACAATACTTTTaGCCCAGCAGGATCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: DHFMVSKPVPSRKPYISSDEQYF*PSRILS Trigger: ACTCAGGATCCTGCTGGGCAAAAAGTATTGTTCATC...TGAGGATATGTAGGGTTTCCTAGATGGTACAGGTTTTGAAACCATGAAATGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| CDS-3UTR CAA 90 bp | CAGAGCCAAGCCAATTCTTCAGCTATAACATCCCAGAACCACAGATTCTTAATTAAATCTGTAAGCAACTaGGGCAAGATGGCAGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: QSQANSSAITSQNHRFLIKSVSN*GKMAVE Trigger: TTCTACTGCCATCTTGCCCAAGTTGCTTACAGATTT...AATTAAGAATCTGTGGTTCTGGGATGTTATAGCTGAAGAATTGGCTTGGCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| CDS-3UTR CAA 90 bp | CAAAGTGTAGACACTTTGCCCCTTCAAAGAAATGGGAACAAAACACCCATGGAAATACACAGAGATAACTaGAAGCAGAGCATGTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: QSVDTLPLQRNGNKTPMEIHRDN*KQSMCK Trigger: TTTGCACATGCTCTGCTTCAAGTTATCTCTGTGTAT...TTCCATGGGTGTTTTGTTCCCATTTCTTTGAAGGGGCAAAGTGTCTACACTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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| CDS-3UTR CAA 90 bp | ACTCCCAACATTCTTATTTTCCAAGATCTCATAGATCACTCTATTGATCTCTCAGATGAACAATACTTTTaGCCCAGCAGGATCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: TPNILIFQDLIDHSIDLSDEQYF*PSRILS Trigger: ACTCAGGATCCTGCTGGGCAAAAAGTATTGTTCATC...TGAGAGATCAATAGAGTGATCTATGAGATCTTGGAAAATAAGAATGTTGGGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111527.4 ENSMUST00000215730.3 |
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