Pregenerated sensors for OLFR125 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050613Ensembl transcript IDs: ENSMUST00000050255.5, ENSMUST00000213857.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGCCAGAATACCAGTGAAGATACAGTCAGAACTAATTACTGACTaGTTGGTTGGGTGTAGAGAGAAGATAGCATTCAATTACATGAAC | + |
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Preference number: 1 (lower is better) Translates to: SARIPVKIQSELITD*LVGCREKIAFNYMN Trigger: GTTCATGTAATTGAATGCTATCTTCTCTCTACACCCAACCAACCAGTCAGTAATTAGTTCTGACTGTATCTTCACTGGTATTCTGGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAAGATGCAACCCACTGTTAAACTCATGTAGGAGAAAGGGTGAGTCACAAGGGAAAGACTTAACTTaGGCATTTTCACTGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: PGRCNPLLNSCRRKGESQGKDLT*AFSLME Trigger: TTCCATCAGTGAAAATGCTCAAGTTAAGTCTTTCCC...TTGTGACTCACCCTTTCTCCTACATGAGTTTAACAGTGGGTTGCATCTTCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR CAA 90 bp | GCCAGAATACCAGTGAAGATACAGTCAGAACTAATTACTGACTGGTaGGTTGGGTGTAGAGAGAAGATAGCATTCAATTACATGAACAAG | + |
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Preference number: 2 (lower is better) Translates to: ARIPVKIQSELITDW*VGCREKIAFNYMNK Trigger: CTTGTTCATGTAATTGAATGCTATCTTCTCTCTACACCCAACCAACCAGTCAGTAATTAGTTCTGACTGTATCTTCACTGGTATTCTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAATACAGTGGATAAAACAGTAGTACCCAGGAAGATGCAACCCACTGTTAAAGTGCTTTGCTTCATTTaGACACTGAGGGTAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: RNTVDKTVVPRKMQPTVKVLCFI*TLRVKD Trigger: ATCTTTTACCCTCAGTGTTCAAATGAAGCAAAGCAC...TTTAACAGTGGGTTGCATCTTCCTGGGTACTACTGTTTTATCCACTGTATTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAATACAGTGGATAAAACAGTAGTACCCAGGAAGATGCAACCCACTGTTAAACTTGAGCATTTTCACTaGTGGAAAAGAAGATTCTTG | + |
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Preference number: 2 (lower is better) Translates to: RNTVDKTVVPRKMQPTVKLEHFH*WKRRFL Trigger: CAAGAATCTTCTTTTCCATCAGTGAAAATGCTCAAG...TTTAACAGTGGGTTGCATCTTCCTGGGTACTACTGTTTTATCCACTGTATTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACTGATACATGTGAATACTACTTTGGTTCTGTGAGTGTTTTGATTGAGGTTGAAGAAGGGAGCCCATaGATATCCTTACTGGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: LTDTCEYYFGSVSVLIEVEEGSP*ISLLVN Trigger: ATTGACCAGTAAGGATATCCATGGGCTCCCTTCTTC...AACCTCAATCAAAACACTCACAGAACCAAAGTAGTATTCACATGTATCAGTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACTGATACATGTGAATACTACTTTGGTTCTGTGAGTGTTTTGATTGAGGTTCCCAGTGCAGGAATCTaGGAAAATGTTTATCTACAG | + |
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Preference number: 2 (lower is better) Translates to: LTDTCEYYFGSVSVLIEVPSAGI*ENVYLQ Trigger: CTGTAGATAAACATTTTCTCAGATTCCTGCACTGGG...AACCTCAATCAAAACACTCACAGAACCAAAGTAGTATTCACATGTATCAGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR TCA 90 bp | AATCTAAAACACCTATTGTTCCAACCCTGCTCATTCCTAATGTCATTAGAATGTGATCTACTTCATTACTaGGTTGTAATCATGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: NLKHLLFQPCSFLMSLECDLLHY*VVIMCP Trigger: GGGACACATGATTACAACTCAGTAATGAAGTAGATC...ACATTCTAATGACATTAGGAATGAGCAGGGTTGGAACAATAGGTGTTTTAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACTGATACATGTGAATACTACTTTGGTTCTGTGAGTGTTTTGATTGAGGTTAATGCCATTCATTTCTaGTACACACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: LTDTCEYYFGSVSVLIEVNAIHF*YTHTHT Trigger: TGTGTGTGTGTGTGTGTATCAGAAATGAATGGCATT...AACCTCAATCAAAACACTCACAGAACCAAAGTAGTATTCACATGTATCAGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTAAAACACCTATTGTTCCAACCCTGCTCATTCCTAATGTCATTAGAATGTTGGGAACAAAGCATTTaGATTGTGAGACATATAGGT | + |
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Preference number: 2 (lower is better) Translates to: NLKHLLFQPCSFLMSLECWEQSI*IVRHIG Trigger: ACCTATATGTCTCACAATGCAAATGCTTTGTTCCCA...ACATTCTAATGACATTAGGAATGAGCAGGGTTGGAACAATAGGTGTTTTAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR GCA 90 bp | TTGACTGATACATGTGAATACTACTTTGGTTCTGTGAGTGTTTTGATTGAGGTTGAACTATTTACCCAGTaGAGGAATCTGAGAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: LTDTCEYYFGSVSVLIEVELFTQ*RNLRKC Trigger: ACATTTTCTCAGATTCCTGCACTGGGTAAATAGTTC...AACCTCAATCAAAACACTCACAGAACCAAAGTAGTATTCACATGTATCAGTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTAAAACACCTATTGTTCCAACCCTGCTCATTCCTAATGTCATTAGAATGTAGGGATCTAGTATCATaGAGAGAAAATCAGTTTATC | + |
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Preference number: 2 (lower is better) Translates to: NLKHLLFQPCSFLMSLECRDLVS*RENQFI Trigger: GATAAACTGATTTTCTCTGCATGATACTAGATCCCT...ACATTCTAATGACATTAGGAATGAGCAGGGTTGGAACAATAGGTGTTTTAGATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR CCA 90 bp | AATCTAAAACACCTATTGTTCCAACCCTGCTCATTCCTAATGTCATTAGAATGTCATGGATATCCTTACTaGTCAATTATCTTTCACTTG | + |
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Preference number: 2 (lower is better) Translates to: NLKHLLFQPCSFLMSLECHGYPY*SIIFHL Trigger: CAAGTGAAAGATAATTGACCAGTAAGGATATCCATG...ACATTCTAATGACATTAGGAATGAGCAGGGTTGGAACAATAGGTGTTTTAGATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGAAGATGCAACCCACTGTTAAACTCATGTAGGAGAAAGGGTGAGTCACAAAGGGAAAGACTTAACTaGAGCATTTTCACTGATGGA | + |
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Preference number: 3 (lower is better) Translates to: PGRCNPLLNSCRRKGESQRERLN*SIFTDG Trigger: TCCATCAGTGAAAATGCTCAAGTTAAGTCTTTCCCT...TTGTGACTCACCCTTTCTCCTACATGAGTTTAACAGTGGGTTGCATCTTCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR GCA 72 bp | GGCTCACCCCTTCAACAACAGTTCAGTCTAATGATATaGAAAGATGGCAAAGATCAAAGAACATTCCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: GSPLQQQFSLMI*KDGKDQRTFPL Trigger: AAGGGGGAATGTTCTTTGATCTTTGCCATCTTTGCATATCATTAGACTGAACTGTTGTTGAAGGGGTGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGAAGATGCAACCCACTGTTAAACTCATGTAGGAGAAAGGGTGAGTCACAAAGAATAGAGGGAAACTaGACAGTAAGTAATAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: PGRCNPLLNSCRRKGESQRIEGN*TVSNKG Trigger: TCCCTTATTACTTACTGTCAAGTTTCCCTCTATTCT...TTGTGACTCACCCTTTCTCCTACATGAGTTTAACAGTGGGTTGCATCTTCCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR TCA 72 bp | CCTCAGAATAGCACACTCAGCAACAAACTTTCCAGCTaGAGAGTGAATGATATAAACCCAGAAAGGGAAACA | + |
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Preference number: 3 (lower is better) Translates to: PQNSTLSNKLSS*RVNDINPERET Trigger: TGTTTCCCTTTCTGGGTTTATATCATTCACTCTTCAGCTGGAAAGTTTGTTGCTGAGTGTGCTATTCTGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR CCA 72 bp | GATTGGAGGAAGAAGGGAGCCCATGGATATCCTTACTaGTCAATTATCTTTCACTTGATAGAACTATCTCTG | + |
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Preference number: 3 (lower is better) Translates to: DWRKKGAHGYPY*SIIFHLIELSL Trigger: CAGAGATAGTTCTATCAAGTGAAAGATAATTGACCAGTAAGGATATCCATGGGCTCCCTTCTTCCTCCAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAATACAGTGGATAAAACAGTAGTACCCAGGAAGATGCAACCCACTGTTAAATTGGGAACAAAGCATTaGCATTGTGAGACATATAGG | + |
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Preference number: 3 (lower is better) Translates to: RNTVDKTVVPRKMQPTVKLGTKH*HCETYR Trigger: CCTATATGTCTCACAATGCAAATGCTTTGTTCCCAA...TTTAACAGTGGGTTGCATCTTCCTGGGTACTACTGTTTTATCCACTGTATTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAATACAGTGGATAAAACAGTAGTACCCAGGAAGATGCAACCCACTGTTAAATGTGCTTTGCTTCATTaGAACACTGAGGGTAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: RNTVDKTVVPRKMQPTVKCALLH*NTEGKR Trigger: TCTTTTACCCTCAGTGTTCAAATGAAGCAAAGCACA...TTTAACAGTGGGTTGCATCTTCCTGGGTACTACTGTTTTATCCACTGTATTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR TCA 72 bp | CACACTCAGCAACAAACTTTCCAGCTGAAGAGTGAATaGTATAAACCCAGAAAGGGAAACAACTGTGTAATG | + |
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Preference number: 3 (lower is better) Translates to: HTQQQTFQLKSE*YKPRKGNNCVM Trigger: CATTACACAGTTGTTTCCCTTTCTGGGTTTATATCATTCACTCTTCAGCTGGAAAGTTTGTTGCTGAGTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR CAA 90 bp | AATCTAAAACACCTATTGTTCCAACCCTGCTCATTCCTAATGTCATTAGAATGTGAAATAATATTGGGATaGGAGGAAGAAGGGAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: NLKHLLFQPCSFLMSLECEIILG*EEEGSP Trigger: TGGGCTCCCTTCTTCCTCCAATCCCAATATTATTTC...ACATTCTAATGACATTAGGAATGAGCAGGGTTGGAACAATAGGTGTTTTAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR CCA 72 bp | GAAATAATATTGGGATTGGAGGAAGAAGGGAGCCCATaGATATCCTTACTGGTCAATTATCTTTCACTTGAT | + |
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Preference number: 3 (lower is better) Translates to: EIILGLEEEGSP*ISLLVNYLSLD Trigger: ATCAAGTGAAAGATAATTGACCAGTAAGGATATCCATGGGCTCCCTTCTTCCTCCAATCCCAATATTATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR-3UTR CAA 90 bp | AATCTAAAACACCTATTGTTCCAACCCTGCTCATTCCTAATGTCATTAGAATGTCTGACTGTAAGGATCTaGCTGGAGTCTCTTTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: NLKHLLFQPCSFLMSLECLTVRI*LESLFV Trigger: TACAAAAAGAGACTCCAGCAAGATCCTTACAGTCAG...ACATTCTAATGACATTAGGAATGAGCAGGGTTGGAACAATAGGTGTTTTAGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR GCA 72 bp | TATTCCCCGAGTAAAAGACATAACAAATCATACTACTaGAACGTAGATGCCCTATACCTATGTAATAGAATA | + |
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Preference number: 3 (lower is better) Translates to: YSPSKRHNKSYY*NVDALYLCNRI Trigger: TATTCTATTACATAGGTATAGGGCATCTACGTTGCAGTAGTATGATTTGTTATGTCTTTTACTCGGGGAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR CCA 90 bp | AGGAATACAGTGGATAAAACAGTAGTACCCAGGAAGATGCAACCCACTGTTAAATGTCTCATACTGCAGTaGCCGACAGATGGCAACATA | + |
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Preference number: 4 (lower is better) Translates to: RNTVDKTVVPRKMQPTVKCLILQ*PTDGNI Trigger: TATGTTGCCATCTGTCGGCCACTGCAGTATGAGACA...TTTAACAGTGGGTTGCATCTTCCTGGGTACTACTGTTTTATCCACTGTATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR TCA 90 bp | AGGAATACAGTGGATAAAACAGTAGTACCCAGGAAGATGCAACCCACTGTTAAAACCATTGTCCATGAGTaGGTTTGCAATAGACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RNTVDKTVVPRKMQPTVKTIVHE*VCNRLR Trigger: CCTCAGTCTATTGCAAACTCACTCATGGACAATGGT...TTTAACAGTGGGTTGCATCTTCCTGGGTACTACTGTTTTATCCACTGTATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR TCA 90 bp | AGGAATACAGTGGATAAAACAGTAGTACCCAGGAAGATGCAACCCACTGTTAAAATGAGGCCAGAGCTATaGAGAAGAAAACCTGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: RNTVDKTVVPRKMQPTVKMRPEL*RRKPEA Trigger: TGCTTCAGGTTTTCTTCTTCATAGCTCTGGCCTCAT...TTTAACAGTGGGTTGCATCTTCCTGGGTACTACTGTTTTATCCACTGTATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR TCA 90 bp | CCAGGAAGATGCAACCCACTGTTAAACTCATGTAGGAGAAAGGGTGAGTCACAAAATTCTCATCACAGTTaGGAAGATCTGAGTATAGGA | + |
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Preference number: 4 (lower is better) Translates to: PGRCNPLLNSCRRKGESQNSHHS*EDLSIG Trigger: TCCTATACTCAGATCTTCTCAACTGTGATGAGAATT...TTGTGACTCACCCTTTCTCCTACATGAGTTTAACAGTGGGTTGCATCTTCCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR CCA 90 bp | GAACTATTTACCCAGTGCAGGAATCTGAGAAAATGTTTATCTACAGTGCCAGAAGCACACTTGCAGGCATaGGGATCCATAATTGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: ELFTQCRNLRKCLSTVPEAHLQA*GSIIVS Trigger: TGAGACAATTATGGATCCCCATGCCTGCAAGTGTGC...TTCTGGCACTGTAGATAAACATTTTCTCAGATTCCTGCACTGGGTAAATAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR TCA 90 bp | AGGAATACAGTGGATAAAACAGTAGTACCCAGGAAGATGCAACCCACTGTTAAATGGCCAACAGGTATGTaGTCAAAAAGAGCACTGAAT | + |
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Preference number: 4 (lower is better) Translates to: RNTVDKTVVPRKMQPTVKWPTGM*SKRALN Trigger: ATTCAGTGCTCTTTTTGATCACATACCTGTTGGCCA...TTTAACAGTGGGTTGCATCTTCCTGGGTACTACTGTTTTATCCACTGTATTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR CCA 90 bp | AGGAATACAGTGGATAAAACAGTAGTACCCAGGAAGATGCAACCCACTGTTAAAGAGTGGATTGAGTGTTaGAGGTATCACAGTGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: RNTVDKTVVPRKMQPTVKEWIEC*RYHSVE Trigger: TTCTACACTGTGATACCTCCAACACTCAATCCACTC...TTTAACAGTGGGTTGCATCTTCCTGGGTACTACTGTTTTATCCACTGTATTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR TCA 90 bp | GAACTATTTACCCAGTGCAGGAATCTGAGAAAATGTTTATCTACAGTGCCAGAACCCACAAAGAGGAATTaGGAAATTAACACCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: ELFTQCRNLRKCLSTVPEPTKRN*EINTCV Trigger: CACACAGGTGTTAATTTCTCAATTCCTCTTTGTGGG...TTCTGGCACTGTAGATAAACATTTTCTCAGATTCCTGCACTGGGTAAATAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR TCA 90 bp | AATCTAAAACACCTATTGTTCCAACCCTGCTCATTCCTAATGTCATTAGAATGTTTCAAAGCCTGCAGCTaGGAGGAAGAACATGACTAC | + |
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Preference number: 4 (lower is better) Translates to: NLKHLLFQPCSFLMSLECFKACS*EEEHDY Trigger: GTAGTCATGTTCTTCCTCTCAGCTGCAGGCTTTGAA...ACATTCTAATGACATTAGGAATGAGCAGGGTTGGAACAATAGGTGTTTTAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR GCA 90 bp | AGGAATACAGTGGATAAAACAGTAGTACCCAGGAAGATGCAACCCACTGTTAAATGTGGATGTTGTAAATaGAGCCACTGCAATCTCATT | + |
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Preference number: 4 (lower is better) Translates to: RNTVDKTVVPRKMQPTVKCGCCK*SHCNLI Trigger: AATGAGATTGCAGTGGCTGCATTTACAACATCCACA...TTTAACAGTGGGTTGCATCTTCCTGGGTACTACTGTTTTATCCACTGTATTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR GCA 90 bp | AATCTAAAACACCTATTGTTCCAACCCTGCTCATTCCTAATGTCATTAGAATGTCACTTTCCTCAGAGCTaGTTTCATGGCCTCATTCCT | + |
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Preference number: 4 (lower is better) Translates to: NLKHLLFQPCSFLMSLECHFPQS*FHGLIP Trigger: AGGAATGAGGCCATGAAAGCAGCTCTGAGGAAAGTG...ACATTCTAATGACATTAGGAATGAGCAGGGTTGGAACAATAGGTGTTTTAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR CAA 72 bp | CCAGTGAAGATACAGTCAGAACTAATTACTGACTGGTaGGTTGGGTGTAGAGAGAAGATAGCATTCAATTAC | + |
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Preference number: 4 (lower is better) Translates to: PVKIQSELITDW*VGCREKIAFNY Trigger: GTAATTGAATGCTATCTTCTCTCTACACCCAACCAACCAGTCAGTAATTAGTTCTGACTGTATCTTCACTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR TCA 90 bp | GAACTATTTACCCAGTGCAGGAATCTGAGAAAATGTTTATCTACAGTGCCAGAAACTGAATGTAAAATCTaGAGGTTACGCTCATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ELFTQCRNLRKCLSTVPETECKI*RLRSSE Trigger: CTCTGATGAGCGTAACCTTCAGATTTTACATTCAGT...TTCTGGCACTGTAGATAAACATTTTCTCAGATTCCTGCACTGGGTAAATAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR TCA 90 bp | AATCTAAAACACCTATTGTTCCAACCCTGCTCATTCCTAATGTCATTAGAATGTAGTCCGACTATCAGCTaGTGGAATTCTCATCACAGT | + |
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Preference number: 4 (lower is better) Translates to: NLKHLLFQPCSFLMSLECSPTIS*WNSHHS Trigger: ACTGTGATGAGAATTCCATCAGCTGATAGTCGGACT...ACATTCTAATGACATTAGGAATGAGCAGGGTTGGAACAATAGGTGTTTTAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR TCA 90 bp | TTGACTGATACATGTGAATACTACTTTGGTTCTGTGAGTGTTTTGATTGAGGTTAGAATATGGAGAATATaGGGTCCATTGCTGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: LTDTCEYYFGSVSVLIEVRIWRI*GPLLTG Trigger: CCCTGTCAGCAATGGACCTCATATTCTCCATATTCT...AACCTCAATCAAAACACTCACAGAACCAAAGTAGTATTCACATGTATCAGTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR TCA 90 bp | TTGACTGATACATGTGAATACTACTTTGGTTCTGTGAGTGTTTTGATTGAGGTTCTGAGAGGAAGAACATaGCTACAAACAAATGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: LTDTCEYYFGSVSVLIEVLRGRT*LQTNVV Trigger: TACCACATTTGTTTGTAGTCATGTTCTTCCTCTCAG...AACCTCAATCAAAACACTCACAGAACCAAAGTAGTATTCACATGTATCAGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR GCA 90 bp | GAACTATTTACCCAGTGCAGGAATCTGAGAAAATGTTTATCTACAGTGCCAGAATGTAAATGCAGCCACTaGAATCTCATTAATGAATTC | + |
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Preference number: 4 (lower is better) Translates to: ELFTQCRNLRKCLSTVPECKCSH*NLINEF Trigger: GAATTCATTAATGAGATTGCAGTGGCTGCATTTACA...TTCTGGCACTGTAGATAAACATTTTCTCAGATTCCTGCACTGGGTAAATAGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR CAA 72 bp | AGAAAATCTTGTAGCTATGTAAGAATAGAGGGAAACTaGACAGTAAGTAATAAGGGATCTAGTATCATGCAG | + |
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Preference number: 4 (lower is better) Translates to: RKSCSYVRIEGN*TVSNKGSSIMQ Trigger: CTGCATGATACTAGATCCCTTATTACTTACTGTCAAGTTTCCCTCTATTCTTACATAGCTACAAGATTTTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR CAA 72 bp | ATTGAAATAAGTCTATATTGCATTCAAAACAGAAAGTaGGTAGGAACTATTTACCCAGTGCAGGAATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: IEISLYCIQNRK*VGTIYPVQESE Trigger: CTCAGATTCCTGCACTGGGTAAATAGTTCCTACCAACTTTCTGTTTTGAATGCAATATAGACTTATTTCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| 3UTR CAA 72 bp | GATACATGTGAATACTACTTTGGTTCTGTGAGTGTTTaGATTGAGGTTGGTAATTTAAATGGTGGCATTCAA | + |
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Preference number: 4 (lower is better) Translates to: DTCEYYFGSVSV*IEVGNLNGGIQ Trigger: TTGAATGCCACCATTTAAATTACCAACCTCAATCAAAACACTCACAGAACCAAAGTAGTATTCACATGTATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS TCA 90 bp | CTGAAGCATACACTGACCAAGAGAAATGAAACCATTGTCCATGAGTaGGTTTGCAATAGACTGAGGAACAGTAACAGAGATGAAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LKHTLTKRNETIVHE*VCNRLRNSNRDEAE Trigger: CTCTGCTTCATCTCTGTTACTGTTCCTCAGTCTATTGCAAACTCACTCATGGACAATGGTTTCATTTCTCTTGGTCAGTGTATGCTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050255.5 ENSMUST00000213857.2 |
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| CDS-3UTR CAA 90 bp | AATCTAAAACACCTATTGTTCCAACCCTGCTCATTCCTAATGTCATTAGAATGTGCTATCACTGCACACTaGCAGGCATGGGGATCCATA | + |
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Preference number: 5 (lower is better) Translates to: NLKHLLFQPCSFLMSLECAITAH*QAWGSI Trigger: TATGGATCCCCATGCCTGCAAGTGTGCAGTGATAGC...ACATTCTAATGACATTAGGAATGAGCAGGGTTGGAACAATAGGTGTTTTAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR CAA 90 bp | CCAGGAAGATGCAACCCACTGTTAAACTCATGTAGGAGAAAGGGTGAGTCACAAGAGAAAATTCTTCTTTaGACAACACTTTCCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: PGRCNPLLNSCRRKGESQEKILL*TTLSSE Trigger: CTCTGAGGAAAGTGTTGTCAAAAGAAGAATTTTCTC...TTGTGACTCACCCTTTCTCCTACATGAGTTTAACAGTGGGTTGCATCTTCCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR CAA 90 bp | AGGAATACAGTGGATAAAACAGTAGTACCCAGGAAGATGCAACCCACTGTTAAAGAATTCTCATCACAGTaGAGAAGATCTGAGTATAGG | + |
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Preference number: 5 (lower is better) Translates to: RNTVDKTVVPRKMQPTVKEFSSQ*RRSEYR Trigger: CCTATACTCAGATCTTCTCAACTGTGATGAGAATTC...TTTAACAGTGGGTTGCATCTTCCTGGGTACTACTGTTTTATCCACTGTATTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS-3UTR CAA 90 bp | TTGACTGATACATGTGAATACTACTTTGGTTCTGTGAGTGTTTTGATTGAGGTTAGAGAAATGAAACCATaGTCCATGAGTGAGTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: LTDTCEYYFGSVSVLIEVREMKP*SMSEFA Trigger: TGCAAACTCACTCATGGACAATGGTTTCATTTCTCT...AACCTCAATCAAAACACTCACAGAACCAAAGTAGTATTCACATGTATCAGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213857.2 |
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| CDS CAA 90 bp | AGCCCAGATAGTCCTCCAGCCATCCATACAGCTATCACTGCACACTaGCAGGCATGGGGATCCATAATTGTCTCATACTGCAGTGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: SPDSPPAIHTAITAH*QAWGSIIVSYCSGR Trigger: TCGGCCACTGCAGTATGAGACAATTATGGATCCCCATGCCTGCAAGTGTGCAGTGATAGCTGTATGGATGGCTGGAGGACTATCTGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050255.5 ENSMUST00000213857.2 |
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| CDS CAA 72 bp | AGTCCTCCAGCCATCCATACAGCTATCACTGCACACTaGCAGGCATGGGGATCCATAATTGTCTCATACTGC | + |
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Preference number: 6 (lower is better) Translates to: SPPAIHTAITAH*QAWGSIIVSYC Trigger: GCAGTATGAGACAATTATGGATCCCCATGCCTGCAAGTGTGCAGTGATAGCTGTATGGATGGCTGGAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050255.5 ENSMUST00000213857.2 |
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| CDS CAA 90 bp | GAATGCAGACGTTGGTCCAAGGTGATGATGGTGATAATGAGCAGATaGCCCATGATGGCCAACAGGTATGTGATCAAAAAGAGCACTGAA | + |
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Preference number: 6 (lower is better) Translates to: ECRRWSKVMMVIMSR*PMMANRYVIKKSTE Trigger: TTCAGTGCTCTTTTTGATCACATACCTGTTGGCCATCATGGGCAATCTGCTCATTATCACCATCATCACCTTGGACCAACGTCTGCATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050255.5 ENSMUST00000213857.2 |
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| CDS TCA 72 bp | GTGTTGGAGGTATCACAGTGTAGAATATGGAGAATATaGGGTCCATTGCTGACAGGGAATCTGAAGGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VLEVSQCRIWRI*GPLLTGNLKEV Trigger: GACCTCCTTCAGATTCCCTGTCAGCAATGGACCTCATATTCTCCATATTCTACACTGTGATACCTCCAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050255.5 ENSMUST00000213857.2 |
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| CDS CAA 72 bp | CGTTGGTCCAAGGTGATGATGGTGATAATGAGCAGATaGCCCATGATGGCCAACAGGTATGTGATCAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: RWSKVMMVIMSR*PMMANRYVIKK Trigger: CTTTTTGATCACATACCTGTTGGCCATCATGGGCAATCTGCTCATTATCACCATCATCACCTTGGACCAACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050255.5 ENSMUST00000213857.2 |
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| CDS TCA 72 bp | TTAGAAATTCAAAGCCTGCAGCTGAGAGGAAGAACATaGCTACAAACAAATGTGGTAGACAGGTGGAGAACA | + |
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Preference number: 6 (lower is better) Translates to: LEIQSLQLRGRT*LQTNVVDRWRT Trigger: TGTTCTCCACCTGTCTACCACATTTGTTTGTAGTCATGTTCTTCCTCTCAGCTGCAGGCTTTGAATTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050255.5 ENSMUST00000213857.2 |
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