Pregenerated sensors for OLFR1249 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075079Ensembl transcript IDs: ENSMUST00000099769.2, ENSMUST00000216124.3
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTACATGCAAAATACCAGTATTTTCACAGAATCAAGTAGTAGTATaGATGTTCAAGCTGGAACTCACAACCCAAGGGTCTGTTTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: ITCKIPVFSQNQVVV*MFKLELTTQGSVWD Trigger: ATCCCAAACAGACCCTTGGGTTGTGAGTTCCAGCTTGAACATTCATACTACTACTTGATTCTGTGAAAATACTGGTATTTTGCATGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216124.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGACTGCCTATATACTCAACAATCTATCAATCAACCCTACTCCTGTTTTGGAATACTCCAGTGTACATaGCATAATAAGTCGGTTATG | + |
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Preference number: 2 (lower is better) Translates to: QDCLYTQQSINQPYSCFGILQCT*HNKSVM Trigger: CATAACCGACTTATTATGTCATGTACACTGGAGTAT...TCCAAAACAGGAGTAGGGTTGATTGATAGATTGTTGAGTATATAGGCAGTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216124.3 |
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| CDS-3UTR TCA 90 bp | GAATCAAGTAGTAGTATGAATGTTCAAGCTGGAACTCACAACCCAAGGGTCTGTAATAGCATCCATGAGTaGCAGAGAGGCAAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: ESSSSMNVQAGTHNPRVCNSIHE*QRGKEE Trigger: TTCTTCCTTGCCTCTCTGTCACTCATGGATGCTATT...ACAGACCCTTGGGTTGTGAGTTCCAGCTTGAACATTCATACTACTACTTGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216124.3 |
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| CDS-3UTR TCA 90 bp | CAAGACTGCCTATATACTCAACAATCTATCAATCAACCCTACTCCTGTTTTGGACCATTGCCAGCAGAATaGCAATGTCAACCCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: QDCLYTQQSINQPYSCFGPLPAE*QCQPHQ Trigger: TTGGTGGGGTTGACATTGTCATTCTGCTGGCAATGG...TCCAAAACAGGAGTAGGGTTGATTGATAGATTGTTGAGTATATAGGCAGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216124.3 |
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| CDS-3UTR CCA 90 bp | AGTAGTAGTATGAATGTTCAAGCTGGAACTCACAACCCAAGGGTCTGTTTGGGAATTGGGACCACAGAATaGAAAATTATATACAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: SSSMNVQAGTHNPRVCLGIGTTE*KIIYSE Trigger: CTCGCTGTATATAATTTTCCATTCTGTGGTCCCAAT...TCCCAAACAGACCCTTGGGTTGTGAGTTCCAGCTTGAACATTCATACTACTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216124.3 |
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| CDS-3UTR TCA 90 bp | TCAACAATCTATCAATCAACCCTACTCCTGTTTTGGAAACACTGGTTAAGTAAATATACAGCGAGAACTTaGAACAAAGCATGTGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: STIYQSTLLLFWKHWLSKYTART*NKACAR Trigger: TCTTGCACATGCTTTGTTTCAAGTTCTCGCTGTATA...TTTACTTAACCAGTGTTTCCAAAACAGGAGTAGGGTTGATTGATAGATTGTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216124.3 |
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| CDS-3UTR CAA 90 bp | GAATCAAGTAGTAGTATGAATGTTCAAGCTGGAACTCACAACCCAAGGGTCTGTATATACAGCGAGAACTaGAAACAAAGCATGTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: ESSSSMNVQAGTHNPRVCIYSEN*KQSMCK Trigger: CTTGCACATGCTTTGTTTCAAGTTCTCGCTGTATAT...ACAGACCCTTGGGTTGTGAGTTCCAGCTTGAACATTCATACTACTACTTGATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216124.3 |
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| CDS-3UTR CAA 90 bp | TCAACAATCTATCAATCAACCCTACTCCTGTTTTGGAAACACTGGTTAAGTAAAAAGTCTACTATCAACTaGGGTGTGATGGCAGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: STIYQSTLLLFWKHWLSKKSTIN*GVMAVE Trigger: CTCCACTGCCATCACACCCAAGTTGATAGTAGACTT...TTTACTTAACCAGTGTTTCCAAAACAGGAGTAGGGTTGATTGATAGATTGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216124.3 |
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| CDS-3UTR CAA 90 bp | TCAACAATCTATCAATCAACCCTACTCCTGTTTTGGAAACACTGGTTAAGTAAAACAGCCGTATTCTACTaGGACTTAATGTTTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: STIYQSTLLLFWKHWLSKTAVFY*DLMFSA Trigger: TGCAGAAAACATTAAGTCCAAGTAGAATACGGCTGT...TTTACTTAACCAGTGTTTCCAAAACAGGAGTAGGGTTGATTGATAGATTGTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216124.3 |
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| CDS TCA 72 bp | GGACCACAGAATGGAAAATTATATACAGCGAGAACTTaGAACAAAGCATGTGCAAGACCTCCCGCCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GPQNGKLYTART*NKACARPPAQA Trigger: GGCCTGGGCGGGAGGTCTTGCACATGCTTTGTTTCAAGTTCTCGCTGTATATAATTTTCCATTCTGTGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099769.2 ENSMUST00000216124.3 |
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| CDS CAA 72 bp | GGGACCACAGAATGGAAAATTATATACAGCGAGAACTaGAAACAAAGCATGTGCAAGACCTCCCGCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GTTEWKIIYSEN*KQSMCKTSRPG Trigger: GCCTGGGCGGGAGGTCTTGCACATGCTTTGTTTCAAGTTCTCGCTGTATATAATTTTCCATTCTGTGGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099769.2 ENSMUST00000216124.3 |
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