Pregenerated sensors for OLFR1247 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075081Ensembl transcript IDs: ENSMUST00000111532.4, ENSMUST00000216424.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCACCATTGTTGGTaGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGG | + |
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Preference number: 1 (lower is better) Translates to: CWRGCGERGTLHHCW*DCKLVQPLWKSVWR Trigger: CCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGTGGAGTGTTCCTCTTTCTCCACATCCACGCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR TCA 90 bp | CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATaGACTAACCAGTACCCCAGAGCTCTTGACTCTAGCTGCATATGT | + |
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Preference number: 1 (lower is better) Translates to: QGAKGICNPIGGTTL*TNQYPRALDSSCIC Trigger: ACATATGCAGCTAGAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR TCA 90 bp | TTGAGGTCATTGAGGCTCTTGGACTTGAGTTTGTGTGGTGGTAAATaGGTCCATTTGCATTCTTCTACATGTAGACAGCCAGTTAGACCA | + |
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Preference number: 1 (lower is better) Translates to: LRSLRLLDLSLCGGK*VHLHSSTCRQPVRP Trigger: TGGTCTAACTGGCTGTCTACATGTAGAAGAATGCAAATGGACTCATTTACCACCACACAAACTCAAGTCCAAGAGCCTCAATGACCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR GCA 90 bp | AGATCGAGAATCGACAAATGGGACCTCATAAAATTGCAAAGCTTCTaGAAGGCAAAAGATACCGTCAATAAGACAAATAGGCCACCAACA | + |
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Preference number: 1 (lower is better) Translates to: RSRIDKWDLIKLQSF*KAKDTVNKTNRPPT Trigger: TGTTGGTGGCCTATTTGTCTTATTGACGGTATCTTTTGCCTTGCAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTCGATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CCA 90 bp | TACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATaGATGGACCTAGAGAGCATCATCCTGAGTGAGGTAACACATTCA | + |
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Preference number: 1 (lower is better) Translates to: YSAIKKNEFMKFLAK*MDLESIILSEVTHS Trigger: TGAATGTGTTACCTCACTCAGGATGATGCTCTCTAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTGAGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CAA 90 bp | CAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCACCATTGTaGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: QMLAWMWRKRNTPPL*VGLQACTTTLEISL Trigger: CAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGTGGAGTGTTCCTCTTTCTCCACATCCACGCCAGCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGGAGAAAGAGGAACACTCCACCATTGTTGGTGGGATTGCAAGCTTGTACAAATAATAGCCAGAAGCTaGAAAGAACCCAGACGCCCC | + |
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Preference number: 2 (lower is better) Translates to: CGERGTLHHCWWDCKLVQIIARS*KEPRRP Trigger: GGGGCGTCTGGGTTCTTTCCAGCTTCTGGCTATTAT...TTGTACAAGCTTGCAATCCCACCAACAATGGTGGAGTGTTCCTCTTTCTCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR-3UTR GCA 90 bp | CCACCCATTTGCCTCAAGTCTCTCCTTAAAGAGAGTGGCTTACTATTTGTCCTGGAGGCCCATTGGACATaGAAACTTTATATGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PPICLKSLLKESGLLFVLEAHWT*KLYMPQ Trigger: CTGGGGCATATAAAGTTTGCATGTCCAATGGGCCTC...CAGGACAAATAGTAAGCCACTCTCTTTAAGGAGAGACTTGAGGCAAATGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGAACCCAGACGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCCATGCAAACTTTATATaGCCCAGTACAGGGGAACAC | + |
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Preference number: 2 (lower is better) Translates to: KEPRRPSTEEWIQKMWYIHANFI*PSTGEH Trigger: GTGTTCCCCTGTACTGGGGCATATAAAGTTTGCATG...GATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCGTCTGGGTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR-3UTR TCA 90 bp | CCACCCATTTGCCTCAAGTCTCTCCTTAAAGAGAGTGGCTTACTATTTGTCCTGCCAACCACAACAAAATaGTATGCGATGGAACAAAAG | + |
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Preference number: 2 (lower is better) Translates to: PPICLKSLLKESGLLFVLPTTTK*YAMEQK Trigger: CTTTTGTTCCATCGCATATCATTTTGTTGTGGTTGG...CAGGACAAATAGTAAGCCACTCTCTTTAAGGAGAGACTTGAGGCAAATGGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR-3UTR CCA 90 bp | CCACCCATTTGCCTCAAGTCTCTCCTTAAAGAGAGTGGCTTACTATTTGTCCTGGTATTTCATAGAAACTaGTCAAGTGGGATGTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: PPICLKSLLKESGLLFVLVFHRN*SSGMSN Trigger: GTTGGACATCCCACTTGACCAGTTTCTATGAAATAC...CAGGACAAATAGTAAGCCACTCTCTTTAAGGAGAGACTTGAGGCAAATGGGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CAA 90 bp | TCCCCACTTTCACTTCTGTTAGTCTGTAATGTGTCCAGTTTTATATaGAGGTCATTGAGGCTCTTGGACTTGAGTTTGTGTGGTGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: SPLSLLLVCNVSSFI*RSLRLLDLSLCGGK Trigger: TTTACCACCACACAAACTCAAGTCCAAGAGCCTCAATGACCTCAATATAAAACTGGACACATTACAGACTAACAGAAGTGAAAGTGGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CAA 90 bp | TTAGAGTCTACAATACCTCCTTCCAGGCCTTCTGGCTTTAAGAGTTaGTTCAGAAATCAGTATAATTCTAATGGGTCTGCCTTTATATGT | + |
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Preference number: 2 (lower is better) Translates to: LESTIPPSRPSGFKS*FRNQYNSNGSAFIC Trigger: ACATATAAAGGCAGACCCATTAGAATTATACTGATTTCTGAACAAACTCTTAAAGCCAGAAGGCCTGGAAGGAGGTATTGTAGACTCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGATACACATAAACATGAATACCTAGTCATAAAAACTCCAGCAATCCAGGTATTTCATAGAAACTaGTCAAGTGGGATGTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: LCDTHKHEYLVIKTPAIQVFHRN*SSGMSN Trigger: GTTGGACATCCCACTTGACCAGTTTCTATGAAATAC...CTGGATTGCTGGAGTTTTTATGACTAGGTATTCATGTTTATGTGTATCACAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111532.4 ENSMUST00000216424.2 |
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| 3UTR GCA 72 bp | GGAGAAAGAGGAACACTCCACCATTGTTGGTGGGATTaGAAGCTTGTACAACCACTCTGGAAATCAGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: GERGTLHHCWWD*KLVQPLWKSVW Trigger: CCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGTGGAGTGTTCCTCTTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CCA 72 bp | CTATGCCCCTCCTTAGAAGTGGGAACAAAACACCCATaGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: LCPSLEVGTKHP*KELQRQSLELR Trigger: CCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCACTTCTAAGGAGGGGCATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CCA 72 bp | CGTGGATGTGGAGAAAGAGGAACACTCCACCATTGTTaGTGGGATTGCAAGCTTGTACAACCACTCTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: RGCGERGTLHHC*WDCKLVQPLWK Trigger: TTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGTGGAGTGTTCCTCTTTCTCCACATCCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR TCA 72 bp | ACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTaGGGCGAAAGGATGGACCATGTAGATACTGCCATA | + |
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Preference number: 3 (lower is better) Translates to: THGRSYRDKVWS*GERMDHVDTAI Trigger: TATGGCAGTATCTACATGGTCCATCCTTTCGCCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CCA 72 bp | AGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATaGCCTAGTCGGCCATCACTGGAAATAGAGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: RALDSSCICIKR*PSRPSLEIEAH Trigger: ATGGGCCTCTATTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CCA 72 bp | ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGACGCCCCTCAACAGAGGAATGG | + |
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Preference number: 3 (lower is better) Translates to: MFIAALFIIARS*KEPRRPSTEEW Trigger: CCATTCCTCTGTTGAGGGGCGTCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CCA 72 bp | GCAATGGCTTGTGCTGTAAGATCGAGAATCGACAAATaGGACCTCATAAAATTGCAAAGCTTCTGCAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: AMACAVRSRIDK*DLIKLQSFCKA Trigger: TGCCTTGCAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTCGATCTTACAGCACAAGCCATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR TCA 72 bp | ACGCTGACACCATTGCATACACTAGCAAGATTTTATTaGAAGGACCCAGATGTAGCTGTCTCTTGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: TLTPLHTLARFY*KDPDVAVSCET Trigger: AGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCAATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR TCA 72 bp | TTTGCTAAACACATGAAACTCAAGAAAAATGAAGACTaGAGTGTGGACACTATGCCCCTCCTTAGAAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: FAKHMKLKKNED*SVDTMPLLRSG Trigger: CCCACTTCTAAGGAGGGGCATAGTGTCCACACTTCAGTCTTCATTTTTCTTGAGTTTCATGTGTTTAGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CCA 72 bp | TATTATGCAGCAGGAGGATTTTCTTTTCTGATCCAATaGGACTTTCTAACTCAATGGTACTGTGTCCAACAG | + |
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Preference number: 3 (lower is better) Translates to: YYAAGGFSFLIQ*DFLTQWYCVQQ Trigger: CTGTTGGACACAGTACCATTGAGTTAGAAAGTCCCATTGGATCAGAAAAGAAAATCCTCCTGCTGCATAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR GCA 72 bp | ACTCTAAACAAAATGCATATATTCCTATTCCAACACTaGCACACAGGTAGTCATGAGCACAAATACTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: TLNKMHIFLFQH*HTGSHEHKYSL Trigger: TAAGGAGTATTTGTGCTCATGACTACCTGTGTGGCAGTGTTGGAATAGGAATATATGCATTTTGTTTAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| CDS-3UTR TCA 90 bp | CCACCCATTTGCCTCAAGTCTCTCCTTAAAGAGAGTGGCTTACTATTTGTCCTGTGCCCAGTAGGATCCTaGGTGAGGCCCAGAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: PPICLKSLLKESGLLFVLCPVGS*VRPRRT Trigger: TGTCCTTCTGGGCCTCACTCAGGATCCTACTGGGCA...CAGGACAAATAGTAAGCCACTCTCTTTAAGGAGAGACTTGAGGCAAATGGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CAA 72 bp | GAGGAACACTCCACCATTGTTGGTGGGATTGCAAGCTaGTACAACCACTCTGGAAATCAGTCTGGCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: EEHSTIVGGIAS*YNHSGNQSGGS Trigger: GGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGTGGAGTGTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CAA 72 bp | CCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATaGGACATAGTACTACCGGAGGATCCCACGATACCT | + |
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Preference number: 4 (lower is better) Translates to: PLWKSVWRFLRK*DIVLPEDPTIP Trigger: AGGTATCGTGGGATCCTCCGGTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CAA 72 bp | GCGTGGATGTGGAGAAAGAGGAACACTCCACCATTGTaGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: AWMWRKRNTPPL*VGLQACTTTLE Trigger: TTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGTGGAGTGTTCCTCTTTCTCCACATCCACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| CDS-3UTR CCA 90 bp | CCACCCATTTGCCTCAAGTCTCTCCTTAAAGAGAGTGGCTTACTATTTGTCCTGAATTCAAGGAGGGGCTaGCAATCACTGTCCCCACGA | + |
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Preference number: 4 (lower is better) Translates to: PPICLKSLLKESGLLFVLNSRRG*QSLSPR Trigger: TCGTGGGGACAGTGATTGCCAGCCCCTCCTTGAATT...CAGGACAAATAGTAAGCCACTCTCTTTAAGGAGAGACTTGAGGCAAATGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CAA 72 bp | TGGAGAAAGAGGAACACTCCACCATTGTTGGTGGGATaGCAAGCTTGTACAACCACTCTGGAAATCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: WRKRNTPPLLVG*QACTTTLEISL Trigger: CAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGTGGAGTGTTCCTCTTTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| CDS-3UTR TCA 90 bp | CTCTGTGATACACATAAACATGAATACCTAGTCATAAAAACTCCAGCAATCCAGTGCCCAGTAGGATCCTaGGTGAGGCCCAGAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: LCDTHKHEYLVIKTPAIQCPVGS*VRPRRT Trigger: TGTCCTTCTGGGCCTCACTCAGGATCCTACTGGGCA...CTGGATTGCTGGAGTTTTTATGACTAGGTATTCATGTTTATGTGTATCACAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111532.4 ENSMUST00000216424.2 |
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| CDS-3UTR TCA 90 bp | CCACCCATTTGCCTCAAGTCTCTCCTTAAAGAGAGTGGCTTACTATTTGTCCTGAACAGCATCCATGAGTaGCAGAAAGGCAAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PPICLKSLLKESGLLFVLNSIHE*QKGKEE Trigger: TTCTTCCTTGCCTTTCTGTCACTCATGGATGCTGTT...CAGGACAAATAGTAAGCCACTCTCTTTAAGGAGAGACTTGAGGCAAATGGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CAA 72 bp | ACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTaGGAGCTGAGGCGAAAGGATGGACCATGTAGATAC | + |
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Preference number: 4 (lower is better) Translates to: TKHPWKELQRQS*ELRRKDGPCRY Trigger: GTATCTACATGGTCCATCCTTTCGCCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| CDS-3UTR TCA 90 bp | CCACCCATTTGCCTCAAGTCTCTCCTTAAAGAGAGTGGCTTACTATTTGTCCTGAATAAACAGCATCCATaGGTGACAGAAAGGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: PPICLKSLLKESGLLFVLNKQHP*VTERQG Trigger: TCCTTGCCTTTCTGTCACTCATGGATGCTGTTTATT...CAGGACAAATAGTAAGCCACTCTCTTTAAGGAGAGACTTGAGGCAAATGGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| CDS-3UTR CCA 90 bp | CTCTGTGATACACATAAACATGAATACCTAGTCATAAAAACTCCAGCAATCCAGAATTCAAGGAGGGGCTaGCAATCACTGTCCCCACGA | + |
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Preference number: 4 (lower is better) Translates to: LCDTHKHEYLVIKTPAIQNSRRG*QSLSPR Trigger: TCGTGGGGACAGTGATTGCCAGCCCCTCCTTGAATT...CTGGATTGCTGGAGTTTTTATGACTAGGTATTCATGTTTATGTGTATCACAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111532.4 ENSMUST00000216424.2 |
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| 3UTR CAA 72 bp | CTTTATGAGATGTTGATCTTAGAGCCTGAGCTACTGTaGTTCTGTTCAGGATTTGTCTCCAGTGCCAACATG | + |
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Preference number: 4 (lower is better) Translates to: LYEMLILEPELL*FCSGFVSSANM Trigger: CATGTTGGCACTGGAGACAAATCCTGAACAGAACAACAGTAGCTCAGGCTCTAAGATCAACATCTCATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| CDS-3UTR TCA 90 bp | TTTCATAGAAACTGGTCAAGTGGGATGTCCAACAAACAAATGAAAATGTGCTCAAACAGCATCCATGAGTaGCAGAAAGGCAAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: FHRNWSSGMSNKQMKMCSNSIHE*QKGKEE Trigger: TTCTTCCTTGCCTTTCTGTCACTCATGGATGCTGTT...TGAGCACATTTTCATTTGTTTGTTGGACATCCCACTTGACCAGTTTCTATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111532.4 ENSMUST00000216424.2 |
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| CDS-3UTR TCA 90 bp | TTTCATAGAAACTGGTCAAGTGGGATGTCCAACAAACAAATGAAAATGTGCTCAGAACCAGACAAGCTGTaGAGGAGATGGTCTTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: FHRNWSSGMSNKQMKMCSEPDKL*RRWSFY Trigger: ATAAAAAGACCATCTCCTTCACAGCTTGTCTGGTTC...TGAGCACATTTTCATTTGTTTGTTGGACATCCCACTTGACCAGTTTCTATGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111532.4 ENSMUST00000216424.2 |
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| CDS-3UTR TCA 90 bp | CTCTGTGATACACATAAACATGAATACCTAGTCATAAAAACTCCAGCAATCCAGGAACCAGACAAGCTGTaGAGGAGATGGTCTTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: LCDTHKHEYLVIKTPAIQEPDKL*RRWSFY Trigger: ATAAAAAGACCATCTCCTTCACAGCTTGTCTGGTTC...CTGGATTGCTGGAGTTTTTATGACTAGGTATTCATGTTTATGTGTATCACAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111532.4 ENSMUST00000216424.2 |
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| 3UTR CAA 72 bp | AGTAGTAGTAGTAGTAGTGTGTATGCTTCTTTTCCTTaGGTCTCCTGGTATGGGGTAATTTATTTCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SSSSSSVYASFP*VSWYGVIYFLR Trigger: TCTCAGGAAATAAATTACCCCATACCAGGAGACCAAAGGAAAAGAAGCATACACACTACTACTACTACTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CAA 72 bp | TTAGTCTGTAATGTGTCCAGTTTTATATTGAGGTCATaGAGGCTCTTGGACTTGAGTTTGTGTGGTGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LVCNVSSFILRS*RLLDLSLCGGK Trigger: TTTACCACCACACAAACTCAAGTCCAAGAGCCTCAATGACCTCAATATAAAACTGGACACATTACAGACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| 3UTR CAA 72 bp | TCACTTCTGTTAGTCTGTAATGTGTCCAGTTTTATATaGAGGTCATTGAGGCTCTTGGACTTGAGTTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SLLLVCNVSSFI*RSLRLLDLSLC Trigger: ACACAAACTCAAGTCCAAGAGCCTCAATGACCTCAATATAAAACTGGACACATTACAGACTAACAGAAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| CDS-3UTR CAA 90 bp | ATGAAATTCCTAGCCAAATGGATGGACCTAGAGAGCATCATCCTGAGTGAGGTACACATGGCTCCATTATaGGCAACTACCGTGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: MKFLAKWMDLESIILSEVHMAPL*ATTVRP Trigger: TGGCCTCACGGTAGTTGCCAATAATGGAGCCATGTG...TACCTCACTCAGGATGATGCTCTCTAGGTCCATCCATTTGGCTAGGAATTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| CDS-3UTR CAA 90 bp | CTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGATATACAGAGAGAACTaGAACCAGAGCATGTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: LWKSVWRFLRKLDIVLPEIYREN*NQSMCK Trigger: TTTGCACATGCTCTGGTTCAAGTTCTCTCTGTATAT...CTCCGGTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111532.4 |
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| CDS-3UTR CAA 90 bp | TTTCATAGAAACTGGTCAAGTGGGATGTCCAACAAACAAATGAAAATGTGCTCACACATGGCTCCATTATaGGCAACTACCGTGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FHRNWSSGMSNKQMKMCSHMAPL*ATTVRP Trigger: TGGCCTCACGGTAGTTGCCAATAATGGAGCCATGTG...TGAGCACATTTTCATTTGTTTGTTGGACATCCCACTTGACCAGTTTCTATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111532.4 ENSMUST00000216424.2 |
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| CDS-3UTR CAA 90 bp | TTTCATAGAAACTGGTCAAGTGGGATGTCCAACAAACAAATGAAAATGTGCTCAATATACAGAGAGAACTaGAACCAGAGCATGTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: FHRNWSSGMSNKQMKMCSIYREN*NQSMCK Trigger: TTTGCACATGCTCTGGTTCAAGTTCTCTCTGTATAT...TGAGCACATTTTCATTTGTTTGTTGGACATCCCACTTGACCAGTTTCTATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111532.4 ENSMUST00000216424.2 |
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