Pregenerated sensors for OLFR1243 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075084Ensembl transcript IDs: ENSMUST00000099775.2, ENSMUST00000144885.3
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAACTAAACTGTACTGGGAGTGATGCTAAAATAGTAGATTTGGCTAGATTTACAATCAACATGCCTACATaGGGAGAGCACAGCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: QLNCTGSDAKIVDLARFTINMPT*GEHSIP Trigger: AGGGATGCTGTGCTCTCCTCATGTAGGCATGTTGAT...TGTAAATCTAGCCAAATCTACTATTTTAGCATCACTCCCAGTACAGTTTAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| 3UTR-3UTR GCA 90 bp | CAACTAAACTGTACTGGGAGTGATGCTAAAATAGTAGATTTGGCTAGATTTACATGTATGATATCAACATaGCTACATGAGGAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: QLNCTGSDAKIVDLARFTCMIST*LHEEST Trigger: TGTGCTCTCCTCATGTAGGCATGTTGATATCATACA...TGTAAATCTAGCCAAATCTACTATTTTAGCATCACTCCCAGTACAGTTTAGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| 3UTR-3UTR CAA 90 bp | CAACTAAACTGTACTGGGAGTGATGCTAAAATAGTAGATTTGGCTAGATTTACAGTTCTTCAAGAAAATTaGACATTGTTTGCAGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: QLNCTGSDAKIVDLARFTVLQEN*TLFAVA Trigger: TGCCACTGCAAACAATGTCAAATTTTCTTGAAGAAC...TGTAAATCTAGCCAAATCTACTATTTTAGCATCACTCCCAGTACAGTTTAGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR GCA 90 bp | ATGAGGAGAGCACAGCATCCCTTGTTAGAATTTACCTCTGATTTTCAATTTACAAGGTGGACAGAGCTTTaGGCCTTCCTTCCTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: MRRAQHPLLEFTSDFQFTRWTEL*AFLPGC Trigger: ACAGCCAGGAAGGAAGGCGCAAAGCTCTGTCCACCT...TGTAAATTGAAAATCAGAGGTAAATTCTAACAAGGGATGCTGTGCTCTCCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR CCA 90 bp | CAACTAAACTGTACTGGGAGTGATGCTAAAATAGTAGATTTGGCTAGATTTACATTGCGCCTTCCTTCCTaGCTGTGGGTCTTAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLNCTGSDAKIVDLARFTLRLPS*LWVLRE Trigger: CTCTCTTAAGACCCACAGCCAGGAAGGAAGGCGCAA...TGTAAATCTAGCCAAATCTACTATTTTAGCATCACTCCCAGTACAGTTTAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR CCA 90 bp | ATGAGGAGAGCACAGCATCCCTTGTTAGAATTTACCTCTGATTTTCAATTTACATGCTCTACAAAGAGCTaGAGCATGCAAGCTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: MRRAQHPLLEFTSDFQFTCSTKS*SMQALK Trigger: CTTCAGAGCTTGCATGCTCCAGCTCTTTGTAGAGCA...TGTAAATTGAAAATCAGAGGTAAATTCTAACAAGGGATGCTGTGCTCTCCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR TCA 90 bp | ATGAGGAGAGCACAGCATCCCTTGTTAGAATTTACCTCTGATTTTCAATTTACATTCCCAGCAGGATCTTaGGTAAGGTCCACAAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: MRRAQHPLLEFTSDFQFTFPAGS*VRSTKM Trigger: CATTTTTGTGGACCTTACTCAAGATCCTGCTGGGAA...TGTAAATTGAAAATCAGAGGTAAATTCTAACAAGGGATGCTGTGCTCTCCTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR TCA 90 bp | ATGAGGAGAGCACAGCATCCCTTGTTAGAATTTACCTCTGATTTTCAATTTACAAAAAGCATCCAGGACTaGCAGACAGGCAAGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MRRAQHPLLEFTSDFQFTKSIQD*QTGKKE Trigger: TTCTTTCTTGCCTGTCTGTCAGTCCTGGATGCTTTT...TGTAAATTGAAAATCAGAGGTAAATTCTAACAAGGGATGCTGTGCTCTCCTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR GCA 90 bp | ATGAGGAGAGCACAGCATCCCTTGTTAGAATTTACCTCTGATTTTCAATTTACATCAATGAGTGTAAGATaGCTCCAACTCCAGCTACCA | + |
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Preference number: 4 (lower is better) Translates to: MRRAQHPLLEFTSDFQFTSMSVR*LQLQLP Trigger: TGGTAGCTGGAGTTGGAGGCATCTTACACTCATTGA...TGTAAATTGAAAATCAGAGGTAAATTCTAACAAGGGATGCTGTGCTCTCCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR CCA 90 bp | ATGAGGAGAGCACAGCATCCCTTGTTAGAATTTACCTCTGATTTTCAATTTACACTTCCTTCCTGGCTGTaGGTCTTAAGAGAGTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MRRAQHPLLEFTSDFQFTLPSWL*VLREFR Trigger: TCTAAACTCTCTTAAGACCCACAGCCAGGAAGGAAG...TGTAAATTGAAAATCAGAGGTAAATTCTAACAAGGGATGCTGTGCTCTCCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR CCA 90 bp | CAACTAAACTGTACTGGGAGTGATGCTAAAATAGTAGATTTGGCTAGATTTACAACAACCACCATGATGTaGGAACTACAGGTGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLNCTGSDAKIVDLARFTTTTMM*ELQVDR Trigger: TCTGTCCACCTGTAGTTCCCACATCATGGTGGTTGT...TGTAAATCTAGCCAAATCTACTATTTTAGCATCACTCCCAGTACAGTTTAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| 3UTR CAA 72 bp | TATCAACATGCCTACATGAGGAGAGCACAGCATCCCTaGTTAGAATTTACCTCTGATTTTCAATTTACAGTT | + |
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Preference number: 4 (lower is better) Translates to: YQHAYMRRAQHP*LEFTSDFQFTV Trigger: AACTGTAAATTGAAAATCAGAGGTAAATTCTAACAAGGGATGCTGTGCTCTCCTCATGTAGGCATGTTGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR TCA 90 bp | ATGAGGAGAGCACAGCATCCCTTGTTAGAATTTACCTCTGATTTTCAATTTACAGGAGCATGCAAGCTCTaGAGGAGATATTATTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: MRRAQHPLLEFTSDFQFTGACKL*RRYYFY Trigger: ATAAAAATAATATCTCCTTCAGAGCTTGCATGCTCC...TGTAAATTGAAAATCAGAGGTAAATTCTAACAAGGGATGCTGTGCTCTCCTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR TCA 90 bp | ATGAGGAGAGCACAGCATCCCTTGTTAGAATTTACCTCTGATTTTCAATTTACATACACAGTGAGAACTTaGATCAATGAGTGTAAGATG | + |
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Preference number: 4 (lower is better) Translates to: MRRAQHPLLEFTSDFQFTYTVRT*INECKM Trigger: CATCTTACACTCATTGATTCAAGTTCTCACTGTGTA...TGTAAATTGAAAATCAGAGGTAAATTCTAACAAGGGATGCTGTGCTCTCCTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR CAA 90 bp | CAACTAAACTGTACTGGGAGTGATGCTAAAATAGTAGATTTGGCTAGATTTACACAGATTACTCCACCATaGGCAATGACAGTGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: QLNCTGSDAKIVDLARFTQITPP*AMTVMP Trigger: TGGCATCACTGTCATTGCCAATGGTGGAGTAATCTG...TGTAAATCTAGCCAAATCTACTATTTTAGCATCACTCCCAGTACAGTTTAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS-3UTR CAA 90 bp | CAACTAAACTGTACTGGGAGTGATGCTAAAATAGTAGATTTGGCTAGATTTACATTTCCCAGCAGGATCTaGAGTAAGGTCCACAAAAAT | + |
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Preference number: 5 (lower is better) Translates to: QLNCTGSDAKIVDLARFTFPSRI*SKVHKN Trigger: ATTTTTGTGGACCTTACTCAAGATCCTGCTGGGAAA...TGTAAATCTAGCCAAATCTACTATTTTAGCATCACTCCCAGTACAGTTTAGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144885.3 |
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| CDS TCA 72 bp | GGACCACAAAAAGGAAGTTTATACACAGTGAGAACTTaGATCAATGAGTGTAAGATGCCTCCAACTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GPQKGSLYTVRT*INECKMPPTPA Trigger: AGCTGGAGTTGGAGGCATCTTACACTCATTGATTCAAGTTCTCACTGTGTATAAACTTCCTTTTTGTGGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099775.2 ENSMUST00000144885.3 |
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