Pregenerated sensors for OLFR1240 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000111174Ensembl transcript IDs: ENSMUST00000215362.2, ENSMUST00000216123.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAGGCTTCTGCTGGCAGCTAATGGGAGCAGGTGCAGAGACCTGTaGCAAAACATTAGGGAGAGCTCTGTGATCCTAGATAGAAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: ERLLLAANGSRCRDL*QNIRESSVILDRKG Trigger: CCCTTTTCTATCTAGGATCACAGAGCTCTCCCTAATGTTTTGCCACAGGTCTCTGCACCTGCTCCCATTAGCTGCCAGCAGAAGCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR GCA 90 bp | CATTTGTCATCAGAGAGGCTTCTGCTGGCAGCTAATGGGAGCAGGTaGAGAGACCTGTGGCAAAACATTAGGGAGAGCTCTGTGATCCTA | + |
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Preference number: 1 (lower is better) Translates to: HLSSERLLLAANGSR*RDLWQNIRESSVIL Trigger: TAGGATCACAGAGCTCTCCCTAATGTTTTGCCACAGGTCTCTGCACCTGCTCCCATTAGCTGCCAGCAGAAGCCTCTCTGATGACAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR CCA 90 bp | CAGAGCAGAACATGTGGTAGTGACCAACAAATGACTGGTCCAACTTaGCCCATACCTGACACTGCCAGGATGACCAAAAACCAGACACTG | + |
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Preference number: 1 (lower is better) Translates to: QSRTCGSDQQMTGPT*PIPDTARMTKNQTL Trigger: CAGTGTCTGGTTTTTGGTCATCCTGGCAGTGTCAGGTATGGGCCAAGTTGGACCAGTCATTTGTTGGTCACTACCACATGTTCTGCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR GCA 90 bp | AGAAGAATTGTGGAAGCTATTGGGATCAAGGACACCACAAGAAAATaGACAGAATCAACTAATGCTCATAGGGGCTTACAAAGACTAAAC | + |
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Preference number: 1 (lower is better) Translates to: RRIVEAIGIKDTTRK*TESTNAHRGLQRLN Trigger: GTTTAGTCTTTGTAAGCCCCTATGAGCATTAGTTGATTCTGTGCATTTTCTTGTGGTGTCCTTGATCCCAATAGCTTCCACAATTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR CCA 90 bp | TATATTCCATTTGTGCTGTTCTTAACTGGAATTGTTCATCTCTCATaGCCATGTATTCATAACTCACACATGGTTGCTTTTTCCTATCTC | + |
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Preference number: 1 (lower is better) Translates to: YIPFVLFLTGIVHLS*PCIHNSHMVAFSYL Trigger: GAGATAGGAAAAAGCAACCATGTGTGAGTTATGAATACATGGCCATGAGAGATGAACAATTCCAGTTAAGAACAGCACAAATGGAATATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR CAA 90 bp | AGTCAATGGTATTCTGCTAGACCCATAGTTAGGAGCCTAGCCCATTaGTCATCAGAGAGGCTTCTGCTGGCAGCTAATGGGAGCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SQWYSARPIVRSLAH*SSERLLLAANGSRC Trigger: GCACCTGCTCCCATTAGCTGCCAGCAGAAGCCTCTCTGATGACAAATGGGCTAGGCTCCTAACTATGGGTCTAGCAGAATACCATTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTGGGGGCAATATGGAAATCTAATCCATTGGAAACTTCCAGAAATCCACATCCTGCCTGTAAGATGTaGTGGGGTAAAGGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: HLGAIWKSNPLETSRNPHPACKM*WGKGRA Trigger: TGCTCTGCCTTTACCCCATCACATCTTACAGGCAGG...ATGTGGATTTCTGGAAGTTTCCAATGGATTAGATTTCCATATTGCCCCCAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTGGGGGCAATATGGAAATCTAATCCATTGGAAACTTCCAGAAATCCACATGCTAATGGGAGCAGGTaGAGAGACCTGTGGCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: HLGAIWKSNPLETSRNPHANGSR*RDLWQN Trigger: GTTTTGCCACAGGTCTCTGCACCTGCTCCCATTAGC...ATGTGGATTTCTGGAAGTTTCCAATGGATTAGATTTCCATATTGCCCCCAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGGATACAATAGATTTCACATATAGGCTAGGCACAGGTAGTGATGGTAACGGGATAGAAGAATTGTaGAAGCTATTGGGATCAAGG | + |
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Preference number: 2 (lower is better) Translates to: EEDTIDFTYRLGTGSDGNGIEEL*KLLGSR Trigger: CCTTGATCCCAATAGCTTCCACAATTCTTCTATCCC...GTTACCATCACTACCTGTGCCTAGCCTATATGTGAAATCTATTGTATCCTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTGGGGGCAATATGGAAATCTAATCCATTGGAAACTTCCAGAAATCCACATCAATGTTTCCAATGGTaGAACTGGGACACCAACTCA | + |
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Preference number: 2 (lower is better) Translates to: HLGAIWKSNPLETSRNPHQCFQW*NWDTNS Trigger: TGAGTTGGTGTCCCAGTTCCACCATTGGAAACATTG...ATGTGGATTTCTGGAAGTTTCCAATGGATTAGATTTCCATATTGCCCCCAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR-3UTR CCA 90 bp | ATACAAGCAAAAGACCAAACTTACACCCAGAATAGCCCAGATACAGAAGATAAACATAAAGAATCCCAGTaGCATGCTGCATCACCCTTT | + |
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Preference number: 2 (lower is better) Translates to: IQAKDQTYTQNSPDTEDKHKESQ*HAASPF Trigger: AAAGGGTGATGCAGCATGCCACTGGGATTCTTTATG...TTTATCTTCTGTATCTGGGCTATTCTGGGTGTAAGTTTGGTCTTTTGCTTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR-3UTR TCA 90 bp | ATACAAGCAAAAGACCAAACTTACACCCAGAATAGCCCAGATACAGAAGATAAAAAGGAATCCCCAAACTaGGCAGGTATAAAAATCTGC | + |
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Preference number: 2 (lower is better) Translates to: IQAKDQTYTQNSPDTEDKKESPN*AGIKIC Trigger: GCAGATTTTTATACCTGCTCAGTTTGGGGATTCCTT...TTTATCTTCTGTATCTGGGCTATTCTGGGTGTAAGTTTGGTCTTTTGCTTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR-3UTR CCA 90 bp | ATACAAGCAAAAGACCAAACTTACACCCAGAATAGCCCAGATACAGAAGATAAAAAAATGTGTAGACATTaGGCCAGGAAACACAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: IQAKDQTYTQNSPDTEDKKMCRH*ARKHKE Trigger: TTCCTTGTGTTTCCTGGCCCAATGTCTACACATTTT...TTTATCTTCTGTATCTGGGCTATTCTGGGTGTAAGTTTGGTCTTTTGCTTGTAT 38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCAATATGGAAATCTAATCCATTGGAAACTTCCAGAAATCCACATGGGTAATTTCATAACTCACACATaGTTGCTTTTTCCTATCTCT | + |
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Preference number: 2 (lower is better) Translates to: GQYGNLIHWKLPEIHMGNFITHT*LLFPIS Trigger: AGAGATAGGAAAAAGCAACCATGTGTGAGTTATGAA...ATTACCCATGTGGATTTCTGGAAGTTTCCAATGGATTAGATTTCCATATTGCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR GCA 72 bp | TCAGAGAGGCTTCTGCTGGCAGCTAATGGGAGCAGGTaGAGAGACCTGTGGCAAAACATTAGGGAGAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: SERLLLAANGSR*RDLWQNIRESS Trigger: AGAGCTCTCCCTAATGTTTTGCCACAGGTCTCTGCACCTGCTCCCATTAGCTGCCAGCAGAAGCCTCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR CCA 72 bp | CTGCTGGCAGCTAATGGGAGCAGGTGCAGAGACCTGTaGCAAAACATTAGGGAGAGCTCTGTGATCCTAGAT | + |
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Preference number: 3 (lower is better) Translates to: LLAANGSRCRDL*QNIRESSVILD Trigger: ATCTAGGATCACAGAGCTCTCCCTAATGTTTTGCCACAGGTCTCTGCACCTGCTCCCATTAGCTGCCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR TCA 72 bp | AAAGGCAGAGCAGAACATGTGGTAGTGACCAACAAATaGCTGGTCCAACTTGGCCCATACCTGACACTGCCA | + |
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Preference number: 3 (lower is better) Translates to: KGRAEHVVVTNK*LVQLGPYLTLP Trigger: TGGCAGTGTCAGGTATGGGCCAAGTTGGACCAGTCATTTGTTGGTCACTACCACATGTTCTGCTCTGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR CCA 72 bp | ACATGTGGTAGTGACCAACAAATGACTGGTCCAACTTaGCCCATACCTGACACTGCCAGGATGACCAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: TCGSDQQMTGPT*PIPDTARMTKN Trigger: GTTTTTGGTCATCCTGGCAGTGTCAGGTATGGGCCAAGTTGGACCAGTCATTTGTTGGTCACTACCACATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR TCA 72 bp | CTGGTCCAACTTGGCCCATACCTGACACTGCCAGGATaGCCAAAAACCAGACACTGGTGTTGTAATTATTTA | + |
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Preference number: 3 (lower is better) Translates to: LVQLGPYLTLPG*PKTRHWCCNYL Trigger: TAAATAATTACAACACCAGTGTCTGGTTTTTGGTCATCCTGGCAGTGTCAGGTATGGGCCAAGTTGGACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR TCA 72 bp | AGACATTGGGCCAGGAAACACAAGGAATCCCCAAACTaGGCAGGTATAAAAATCTGCCATGCAGACCAAATT | + |
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Preference number: 3 (lower is better) Translates to: RHWARKHKESPN*AGIKICHADQI Trigger: AATTTGGTCTGCATGGCAGATTTTTATACCTGCTCAGTTTGGGGATTCCTTGTGTTTCCTGGCCCAATGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR CCA 72 bp | CAGACATCTTCTGTAGCTAAGCAATGTTTCCAATGGTaGAACTGGGACACCAACTCACCTAGAGAGTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: QTSSVAKQCFQW*NWDTNSPREFL Trigger: CAAAAACTCTCTAGGTGAGTTGGTGTCCCAGTTCCACCATTGGAAACATTGCTTAGCTACAGAAGATGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR CCA 72 bp | GATAGGCATGTAACAAGAAGGGCTCAAGGGGATACATaGATTTCCCTGGGAAGAGGATACAATAGATTTCAC | + |
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Preference number: 3 (lower is better) Translates to: DRHVTRRAQGDT*ISLGRGYNRFH Trigger: GTGAAATCTATTGTATCCTCTTCCCAGGGAAATCCATGTATCCCCTTGAGCCCTTCTTGTTACATGCCTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR GCA 72 bp | GTGGAAGCTATTGGGATCAAGGACACCACAAGAAAATaGACAGAATCAACTAATGCTCATAGGGGCTTACAA | + |
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Preference number: 3 (lower is better) Translates to: VEAIGIKDTTRK*TESTNAHRGLQ Trigger: TTGTAAGCCCCTATGAGCATTAGTTGATTCTGTGCATTTTCTTGTGGTGTCCTTGATCCCAATAGCTTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR CCA 72 bp | TCTTCTGTAGCTAAGCAATGTTTCCAATGGTGGAACTaGGACACCAACTCACCTAGAGAGTTTTTGACCTAT | + |
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Preference number: 3 (lower is better) Translates to: SSVAKQCFQWWN*DTNSPREFLTY Trigger: ATAGGTCAAAAACTCTCTAGGTGAGTTGGTGTCCCAGTTCCACCATTGGAAACATTGCTTAGCTACAGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR CCA 72 bp | AGGAGCATTTGGGGGCAATATGGAAATCTAATCCATTaGAAACTTCCAGAAATCCACATGGGTAATCCTATG | + |
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Preference number: 3 (lower is better) Translates to: RSIWGQYGNLIH*KLPEIHMGNPM Trigger: CATAGGATTACCCATGTGGATTTCTGGAAGTTTCCAATGGATTAGATTTCCATATTGCCCCCAAATGCTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGAGGATACAATAGATTTCACATATAGGCTAGGCACAGGTAGTGATGGTAACCCTCAAATCAGGAATTaGACTCTCACCTTGGATCAT | + |
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Preference number: 3 (lower is better) Translates to: EEDTIDFTYRLGTGSDGNPQIRN*TLTLDH Trigger: ATGATCCAAGGTGAGAGTCAAATTCCTGATTTGAGG...GTTACCATCACTACCTGTGCCTAGCCTATATGTGAAATCTATTGTATCCTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR-3UTR CAA 90 bp | ATACAAGCAAAAGACCAAACTTACACCCAGAATAGCCCAGATACAGAAGATAAAAAGGGGATAGAAGAATaGTGGAAGCTATTGGGATCA | + |
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Preference number: 3 (lower is better) Translates to: IQAKDQTYTQNSPDTEDKKGIEE*WKLLGS Trigger: TGATCCCAATAGCTTCCACAATTCTTCTATCCCCTT...TTTATCTTCTGTATCTGGGCTATTCTGGGTGTAAGTTTGGTCTTTTGCTTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR TCA 72 bp | TCAACTAATGCTCATAGGGGCTTACAAAGACTAAACTaGAAATCATGTAGCCTTTATGGGTCTGACCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: STNAHRGLQRLN*KSCSLYGSDLS Trigger: ACTTAGGTCAGACCCATAAAGGCTACATGATTTTCAGTTTAGTCTTTGTAAGCCCCTATGAGCATTAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR CCA 72 bp | TTTGTGCTGTTCTTAACTGGAATTGTTCATCTCTCATaGCCATGTATTCATAACTCACACATGGTTGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: FVLFLTGIVHLS*PCIHNSHMVAF Trigger: AAAAGCAACCATGTGTGAGTTATGAATACATGGCCATGAGAGATGAACAATTCCAGTTAAGAACAGCACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR TCA 72 bp | ATTGGAAACTTCCAGAAATCCACATGGGTAATCCTATaGAAACTCCTAGTAATGAGAAATGTAAAGGACAAA | + |
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Preference number: 3 (lower is better) Translates to: IGNFQKSTWVIL*KLLVMRNVKDK Trigger: TTTGTCCTTTACATTTCTCATTACTAGGAGTTTTCATAGGATTACCCATGTGGATTTCTGGAAGTTTCCAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| 3UTR CAA 72 bp | TATTCTGCTAGACCCATAGTTAGGAGCCTAGCCCATTaGTCATCAGAGAGGCTTCTGCTGGCAGCTAATGGG | + |
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Preference number: 4 (lower is better) Translates to: YSARPIVRSLAH*SSERLLLAANG Trigger: CCCATTAGCTGCCAGCAGAAGCCTCTCTGATGACAAATGGGCTAGGCTCCTAACTATGGGTCTAGCAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | TGTAGGAGGCCTTACTCTTCTGTTTCCTTTCAGAAAAGTGTAGGCCTCCTATGGAGCGATCGTAGGCCATaGAGACCAAAAGGAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: CRRPYSSVSFQKSVGLLWSDRRP*RPKGRP Trigger: AGGTCTTCCTTTTGGTCTTCATGGCCTACGATCGCT...CCATAGGAGGCCTACACTTTTCTGAAAGGAAACAGAAGAGTAAGGCCTCCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | AAAGAAAGCATAAAGAATCCCAGTGGCATGCTGCATCACCCTTTGTTAGAACGTGGTAGCAAACAACGATaGCTTGAACCAAAGAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: KESIKNPSGMLHHPLLERGSKQR*LEPKSD Trigger: GTCACTCTTTGGTTCAAGTCATCGTTGTTTGCTACC...ACGTTCTAACAAAGGGTGATGCAGCATGCCACTGGGATTCTTTATGCTTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | GCTGCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTAGTAAGTAAACAGCATCCATaGGAGACAGAGAGGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: AASPFVRTYCLFVALELVSKQHP*ETERQG Trigger: TCCTTGCCTCTCTGTCTCTCATGGATGCTGTTTACT...TACTAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | GGGCAATATGGAAATCTAATCCATTGGAAACTTCCAGAAATCCACATGGGTAATAGTAAACAGCATCCATaGGAGACAGAGAGGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: GQYGNLIHWKLPEIHMGNSKQHP*ETERQG Trigger: TCCTTGCCTCTCTGTCTCTCATGGATGCTGTTTACT...ATTACCCATGTGGATTTCTGGAAGTTTCCAATGGATTAGATTTCCATATTGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | GCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTAGTATGTAGCGATCGTAGGCCATaGAGACCAAAAGGAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: ASPFVRTYCLFVALELVCSDRRP*RPKGRP Trigger: AGGTCTTCCTTTTGGTCTTCATGGCCTACGATCGCT...ACATACTAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | CATGCTGCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTACATAATCAACTTGGGTaGGAAGGCAGTCGAGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: HAASPFVRTYCLFVALELHNQLG*EGSRVN Trigger: GTTTACTCGACTGCCTTCTCACCCAAGTTGATTATG...TAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGCAGCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | GGGCAATATGGAAATCTAATCCATTGGAAACTTCCAGAAATCCACATGGGTAATCATAATCAACTTGGGTaGGAAGGCAGTCGAGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: GQYGNLIHWKLPEIHMGNHNQLG*EGSRVN Trigger: GTTTACTCGACTGCCTTCTCACCCAAGTTGATTATG...ATTACCCATGTGGATTTCTGGAAGTTTCCAATGGATTAGATTTCCATATTGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | CATGCTGCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTAGGTAGCAAACAACGATaGCTTGAACCAAAGAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: HAASPFVRTYCLFVALELGSKQR*LEPKSD Trigger: GTCACTCTTTGGTTCAAGTCATCGTTGTTTGCTACC...TAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGCAGCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGGATACAATAGATTTCACATATAGGCTAGGCACAGGTAGTGATGGTAACCTCCCTTCCTCACTATaGGACTTAAGAGAGTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: EEDTIDFTYRLGTGSDGNLPSSL*DLREFR Trigger: TCTAAACTCTCTTAAGTCTCATAGTGAGGAAGGGAG...GTTACCATCACTACCTGTGCCTAGCCTATATGTGAAATCTATTGTATCCTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| CDS-3UTR GCA 90 bp | GCTGCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTAGTACAAAGAGCTGGCCAATaGAAGCTGAAACGGAAATTG | + |
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Preference number: 4 (lower is better) Translates to: AASPFVRTYCLFVALELVQRAGQ*KLKRKL Trigger: CAATTTCCGTTTCAGCTTGCATTGGCCAGCTCTTTG...TACTAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR GCA 90 bp | CATTTGGGGGCAATATGGAAATCTAATCCATTGGAAACTTCCAGAAATCCACATCAAAGAGCTGGCCAATaGAAGCTGAAACGGAAATTG | + |
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Preference number: 4 (lower is better) Translates to: HLGAIWKSNPLETSRNPHQRAGQ*KLKRKL Trigger: CAATTTCCGTTTCAGCTTGCATTGGCCAGCTCTTTG...ATGTGGATTTCTGGAAGTTTCCAATGGATTAGATTTCCATATTGCCCCCAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | GCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTAGTATGTCTGGCCAATGCAAGCTaGAACGGAAATTGTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ASPFVRTYCLFVALELVCLANAS*NGNCSS Trigger: AGAAGAACAATTTCCGTTTCAGCTTGCATTGGCCAG...ACATACTAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | GCTGCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTAGTACTCCCTTCCTCACTATaGGACTTAAGAGAGTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: AASPFVRTYCLFVALELVLPSSL*DLREFR Trigger: TCTAAACTCTCTTAAGTCTCATAGTGAGGAAGGGAG...TACTAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR TCA 90 bp | GCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTAGTATGTATGTCACAGATAAAGTaGTCAATGGTATTTGGACCA | + |
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Preference number: 4 (lower is better) Translates to: ASPFVRTYCLFVALELVCMSQIK*SMVFGP Trigger: TGGTCCAAATACCATTGATCACTTTATCTGTGACAT...ACATACTAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR CAA 90 bp | GCTGCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTAGTAAAGTCCATAATCAACTaGGGTGAGAAGGCAGTCGAG | + |
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Preference number: 5 (lower is better) Translates to: AASPFVRTYCLFVALELVKSIIN*GEKAVE Trigger: CTCGACTGCCTTCTCACCCAAGTTGATTATGGACTT...TACTAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR CAA 90 bp | CATGCTGCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTAAAGTCCATAATCAACTaGGGTGAGAAGGCAGTCGAG | + |
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Preference number: 5 (lower is better) Translates to: HAASPFVRTYCLFVALELKSIIN*GEKAVE Trigger: CTCGACTGCCTTCTCACCCAAGTTGATTATGGACTT...TAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGCAGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR CAA 90 bp | GCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTAGTATGTGCAAACAACGATGACTaGAACCAAAGAGTGACCAAA | + |
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Preference number: 5 (lower is better) Translates to: ASPFVRTYCLFVALELVCANNDD*NQRVTK Trigger: TTTGGTCACTCTTTGGTTCAAGTCATCGTTGTTTGC...ACATACTAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR CAA 90 bp | GCTGCATCACCCTTTGTTAGAACGTATTGCCTATTTGTAGCGTTAGAATTAGTAAAGCTGAAACGGAAATaGTTCTTCTATTGCAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: AASPFVRTYCLFVALELVKLKRK*FFYCRV Trigger: TACTCTGCAATAGAAGAACAATTTCCGTTTCAGCTT...TACTAATTCTAACGCTACAAATAGGCAATACGTTCTAACAAAGGGTGATGCAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215362.2 ENSMUST00000216123.2 |
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| CDS-3UTR CAA 90 bp | CATTTGGGGGCAATATGGAAATCTAATCCATTGGAAACTTCCAGAAATCCACATAAGCTGAAACGGAAATaGTTCTTCTATTGCAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: HLGAIWKSNPLETSRNPHKLKRK*FFYCRV Trigger: TACTCTGCAATAGAAGAACAATTTCCGTTTCAGCTT...ATGTGGATTTCTGGAAGTTTCCAATGGATTAGATTTCCATATTGCCCCCAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216123.2 |
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