Pregenerated sensors for OLFR1234 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075090Ensembl transcript IDs: ENSMUST00000137692.3
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATTATAGGTCTTGTAGGGTGGGCTGGGAGATGGGGATATCCTCATaGAGACAGGGTGGCAGAGAGGAGGTATGGGGTGTGAAACAGTCA | + |
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Preference number: 1 (lower is better) Translates to: NYRSCRVGWEMGISS*RQGGREEVWGVKQS Trigger: TGACTGTTTCACACCCCATACCTCCTCTCTGCCACCCTGTCTCCATGAGGATATCCCCATCTCCCAGCCCACCCTACAAGACCTATAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR CCA 90 bp | ACAGTGATTGTTGTAATTATAGGTCTTGTAGGGTGGGCTGGGAGATaGGGATATCCTCATGGAGACAGGGTGGCAGAGAGGAGGTATGGG | + |
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Preference number: 1 (lower is better) Translates to: TVIVVIIGLVGWAGR*GYPHGDRVAERRYG Trigger: CCCATACCTCCTCTCTGCCACCCTGTCTCCATGAGGATATCCCCATCTCCCAGCCCACCCTACAAGACCTATAATTACAACAATCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR CCA 90 bp | TCTGCATACAGTGATTGTTGTAATTATAGGTCTTGTAGGGTGGGCTaGGAGATGGGGATATCCTCATGGAGACAGGGTGGCAGAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SAYSDCCNYRSCRVG*EMGISSWRQGGREE Trigger: CTCCTCTCTGCCACCCTGTCTCCATGAGGATATCCCCATCTCCCAGCCCACCCTACAAGACCTATAATTACAACAATCACTGTATGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CCA 90 bp | CTCACAGATTATTTGGAAAGACCACAAAGTGAGGGGTGTTGGGGTACAAGGAAAGGGTGGGCTGGGAGATaGGGATATCCTCATGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: LTDYLERPQSEGCWGTRKGWAGR*GYPHGD Trigger: GTCTCCATGAGGATATCCCCATCTCCCAGCCCACCC...TTTCCTTGTACCCCAACACCCCTCACTTTGTGGTCTTTCCAAATAATCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR TCA 90 bp | ATCCTCATGGAGACAGGGTGGCAGAGAGGAGGTATGGGGTGTGAAACAGTCAGATTAGTGGAGAAACCATaGTCCCCGGCATTTTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: ILMETGWQRGGMGCETVRLVEKP*SPAFSK Trigger: TTTTGAAAATGCCGGGGATCATGGTTTCTCCACTAA...TCTGACTGTTTCACACCCCATACCTCCTCTCTGCCACCCTGTCTCCATGAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CCA 90 bp | CTCACAGATTATTTGGAAAGACCACAAAGTGAGGGGTGTTGGGGTACAAGGAAAGGCAGAGAGGAGGTATaGGGTGTGAAACAGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LTDYLERPQSEGCWGTRKGREEV*GVKQSE Trigger: CTCTGACTGTTTCACACCCCATACCTCCTCTCTGCC...TTTCCTTGTACCCCAACACCCCTCACTTTGTGGTCTTTCCAAATAATCTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CCA 90 bp | TACAATGTCCATTACTCTGAAACTCACATGCCTCACAGATTATTTGGAAAGACCATGGGGATATCCTCATaGAGACAGGGTGGCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: YNVHYSETHMPHRLFGKTMGISS*RQGGRE Trigger: CTCTCTGCCACCCTGTCTCCATGAGGATATCCCCAT...GGTCTTTCCAAATAATCTGTGAGGCATGTGAGTTTCAGAGTAATGGACATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CCA 90 bp | ATATACTCTCCCCTCAGTTCACAATTGCTCCAATTTAGAGAACTCAAAGAACAATCTTGTAGGGTGGGCTaGGAGATGGGGATATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: IYSPLSSQLLQFRELKEQSCRVG*EMGISS Trigger: TGAGGATATCCCCATCTCCCAGCCCACCCTACAAGA...TTGTTCTTTGAGTTCTCTAAATTGGAGCAATTGTGAACTGAGGGGAGAGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CCA 90 bp | ATATACTCTCCCCTCAGTTCACAATTGCTCCAATTTAGAGAACTCAAAGAACAAATAGGTCTTGTAGGGTaGGCTGGGAGATGGGGATAT | + |
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Preference number: 2 (lower is better) Translates to: IYSPLSSQLLQFRELKEQIGLVG*AGRWGY Trigger: ATATCCCCATCTCCCAGCCCACCCTACAAGACCTAT...TTGTTCTTTGAGTTCTCTAAATTGGAGCAATTGTGAACTGAGGGGAGAGTATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR CAA 90 bp | ATGGACTTTGGTAATGCAGAACATCATAACTACAGGAATAACTACTaGCCATGCTGTCATGCATGGCAATCAACTGTGGTAGCACTATCT | + |
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Preference number: 2 (lower is better) Translates to: MDFGNAEHHNYRNNY*PCCHAWQSTVVALS Trigger: AGATAGTGCTACCACAGTTGATTGCCATGCATGACAGCATGGCAAGTAGTTATTCCTGTAGTTATGATGTTCTGCATTACCAAAGTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CCA 90 bp | TCTATGAGTTCTGAGACACCACATACAATGTCCATTACTCTGAAACTCACATGCTTGCAGGGTTGTTATTaGAGAGATGGCTTGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: SMSSETPHTMSITLKLTCLQGCY*RDGLRK Trigger: TTTTCTCAAGCCATCTCTCCAATAACAACCCTGCAA...GCATGTGAGTTTCAGAGTAATGGACATTGTATGTGGTGTCTCAGAACTCATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CCA 90 bp | ATATACTCTCCCCTCAGTTCACAATTGCTCCAATTTAGAGAACTCAAAGAACAAGAAACAGTCAGAGGGTaGACCAGGAGAGGAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: IYSPLSSQLLQFRELKEQETVRG*TRRGIK Trigger: TTTTATTCCTCTCCTGGTCCACCCTCTGACTGTTTC...TTGTTCTTTGAGTTCTCTAAATTGGAGCAATTGTGAACTGAGGGGAGAGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR GCA 90 bp | ATATACTCTCCCCTCAGTTCACAATTGCTCCAATTTAGAGAACTCAAAGAACAAGTAGAAGAATGGTGTTaGAGGGTTGTTATTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: IYSPLSSQLLQFRELKEQVEEWC*RVVIGE Trigger: CTCTCCAATAACAACCCTGCAACACCATTCTTCTAC...TTGTTCTTTGAGTTCTCTAAATTGGAGCAATTGTGAACTGAGGGGAGAGTATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR GCA 90 bp | TGGATGGGCTTGACAGATTCTTACTCTAAATACCAGAGTCATAGGGAAAAGAAAAATAACTACTTGCCATaGTGTCATGCATGGCAATCA | + |
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Preference number: 2 (lower is better) Translates to: WMGLTDSYSKYQSHREKKNNYLP*CHAWQS Trigger: TGATTGCCATGCATGACAGCATGGCAAGTAGTTATT...TTTCTTTTCCCTATGACTCTGGTATTTAGAGTAAGAATCTGTCAAGCCCATCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CCA 90 bp | TCTATGAGTTCTGAGACACCACATACAATGTCCATTACTCTGAAACTCACATGCGTCTGGTCCTTTAGATaGCCAAATGATGAACAAATT | + |
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Preference number: 2 (lower is better) Translates to: SMSSETPHTMSITLKLTCVWSFR*PNDEQI Trigger: AATTTGTTCATCATTTGGCCATCTAAAGGACCAGAC...GCATGTGAGTTTCAGAGTAATGGACATTGTATGTGGTGTCTCAGAACTCATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CCA 90 bp | TACAATGTCCATTACTCTGAAACTCACATGCCTCACAGATTATTTGGAAAGACCGATAAAATAATGATGTaGGTCTGGTCCTTTAGATGG | + |
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Preference number: 2 (lower is better) Translates to: YNVHYSETHMPHRLFGKTDKIMM*VWSFRW Trigger: CCATCTAAAGGACCAGACCCACATCATTATTTTATC...GGTCTTTCCAAATAATCTGTGAGGCATGTGAGTTTCAGAGTAATGGACATTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR GCA 90 bp | TGGATGGGCTTGACAGATTCTTACTCTAAATACCAGAGTCATAGGGAAAAGAAAAGTAACCTAAATGTTTaGCCATATTCCATCACTCAA | + |
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Preference number: 2 (lower is better) Translates to: WMGLTDSYSKYQSHREKKSNLNV*PYSITQ Trigger: TTGAGTGATGGAATATGGGCAAACATTTAGGTTACT...TTTCTTTTCCCTATGACTCTGGTATTTAGAGTAAGAATCTGTCAAGCCCATCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CCA 90 bp | TGGATGGGCTTGACAGATTCTTACTCTAAATACCAGAGTCATAGGGAAAAGAAATTACTTTCTCCACCATaGAATGAACAACATCTTATG | + |
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Preference number: 2 (lower is better) Translates to: WMGLTDSYSKYQSHREKKLLSPP*NEQHLM Trigger: CATAAGATGTTGTTCATTCCATGGTGGAGAAAGTAA...TTTCTTTTCCCTATGACTCTGGTATTTAGAGTAAGAATCTGTCAAGCCCATCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR CCA 72 bp | TCTTGTAGGGTGGGCTGGGAGATGGGGATATCCTCATaGAGACAGGGTGGCAGAGAGGAGGTATGGGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SCRVGWEMGISS*RQGGREEVWGV Trigger: CACACCCCATACCTCCTCTCTGCCACCCTGTCTCCATGAGGATATCCCCATCTCCCAGCCCACCCTACAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR CCA 72 bp | GGGCTGGGAGATGGGGATATCCTCATGGAGACAGGGTaGCAGAGAGGAGGTATGGGGTGTGAAACAGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: GLGDGDILMETG*QRGGMGCETVR Trigger: TCTGACTGTTTCACACCCCATACCTCCTCTCTGCCACCCTGTCTCCATGAGGATATCCCCATCTCCCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR CCA 72 bp | ATATCCTCATGGAGACAGGGTGGCAGAGAGGAGGTATaGGGTGTGAAACAGTCAGAGGGTGGACCAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: ISSWRQGGREEV*GVKQSEGGPGE Trigger: CTCTCCTGGTCCACCCTCTGACTGTTTCACACCCCATACCTCCTCTCTGCCACCCTGTCTCCATGAGGATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR CCA 72 bp | GTTGTAATTATAGGTCTTGTAGGGTGGGCTGGGAGATaGGGATATCCTCATGGAGACAGGGTGGCAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: VVIIGLVGWAGR*GYPHGDRVAER Trigger: CCTCTCTGCCACCCTGTCTCCATGAGGATATCCCCATCTCCCAGCCCACCCTACAAGACCTATAATTACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR CCA 72 bp | AGTGATTGTTGTAATTATAGGTCTTGTAGGGTGGGCTaGGAGATGGGGATATCCTCATGGAGACAGGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: SDCCNYRSCRVG*EMGISSWRQGG Trigger: GCCACCCTGTCTCCATGAGGATATCCCCATCTCCCAGCCCACCCTACAAGACCTATAATTACAACAATCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR TCA 72 bp | AATTTAAGACCGCTCAGGTGTCTGAAACTGTGCACCTaGCACTGTGCAGTAGTTCAGCTTCTGCATACAGTG | + |
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Preference number: 3 (lower is better) Translates to: NLRPLRCLKLCT*HCAVVQLLHTV Trigger: CACTGTATGCAGAAGCTGAACTACTGCACAGTGTCAGGTGCACAGTTTCAGACACCTGAGCGGTCTTAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CAA 90 bp | CTCACAGATTATTTGGAAAGACCACAAAGTGAGGGGTGTTGGGGTACAAGGAAAGTTGCAGGGTTGTTATaGGAGAGATGGCTTGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LTDYLERPQSEGCWGTRKVAGLL*ERWLEK Trigger: TTTCTCAAGCCATCTCTCCAATAACAACCCTGCAAC...TTTCCTTGTACCCCAACACCCCTCACTTTGTGGTCTTTCCAAATAATCTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CAA 90 bp | CTCACAGATTATTTGGAAAGACCACAAAGTGAGGGGTGTTGGGGTACAAGGAAAAATGGTGTTGCAGGGTaGTTATTGGAGAGATGGCTT | + |
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Preference number: 3 (lower is better) Translates to: LTDYLERPQSEGCWGTRKNGVAG*LLERWL Trigger: AAGCCATCTCTCCAATAACAACCCTGCAACACCATT...TTTCCTTGTACCCCAACACCCCTCACTTTGTGGTCTTTCCAAATAATCTGTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR CCA 72 bp | ACAGATTATTTGGAAAGACCACAAAGTGAGGGGTGTTaGGGTACAAGGAAACTACCTATTTTAGTCCCACTG | + |
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Preference number: 3 (lower is better) Translates to: TDYLERPQSEGC*GTRKLPILVPL Trigger: CAGTGGGACTAAAATAGGTAGTTTCCTTGTACCCCAACACCCCTCACTTTGTGGTCTTTCCAAATAATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CAA 90 bp | TGGATGGGCTTGACAGATTCTTACTCTAAATACCAGAGTCATAGGGAAAAGAAACCCCTCAGTTCACAATaGCTCCAATTTAGAGAACTC | + |
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Preference number: 3 (lower is better) Translates to: WMGLTDSYSKYQSHREKKPLSSQ*LQFREL Trigger: GAGTTCTCTAAATTGGAGCAATTGTGAACTGAGGGG...TTTCTTTTCCCTATGACTCTGGTATTTAGAGTAAGAATCTGTCAAGCCCATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CAA 90 bp | TGGATGGGCTTGACAGATTCTTACTCTAAATACCAGAGTCATAGGGAAAAGAAATGTAGAAGAATGGTGTaGCAGGGTTGTTATTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: WMGLTDSYSKYQSHREKKCRRMV*QGCYWR Trigger: TCTCCAATAACAACCCTGCAACACCATTCTTCTACA...TTTCTTTTCCCTATGACTCTGGTATTTAGAGTAAGAATCTGTCAAGCCCATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR TCA 72 bp | ATCCATATCCTCAACCATGGGACTTCTAAAATTAGATaGACTCCTAAGTCTTCCTCACATCTAAACCTGATA | + |
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Preference number: 3 (lower is better) Translates to: IHILNHGTSKIR*TPKSSSHLNLI Trigger: TATCAGGTTTAGATGTGAGGAAGACTTAGGAGTTCATCTAATTTTAGAAGTCCCATGGTTGAGGATATGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| 3UTR-3UTR CAA 90 bp | ATATACTCTCCCCTCAGTTCACAATTGCTCCAATTTAGAGAACTCAAAGAACAAACTAAAAGACAACACTaGGAGTGGGAATTAAACAAG | + |
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Preference number: 3 (lower is better) Translates to: IYSPLSSQLLQFRELKEQTKRQH*EWELNK Trigger: CTTGTTTAATTCCCACTCCAAGTGTTGTCTTTTAGT...TTGTTCTTTGAGTTCTCTAAATTGGAGCAATTGTGAACTGAGGGGAGAGTATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR TCA 90 bp | ATCCTCATGGAGACAGGGTGGCAGAGAGGAGGTATGGGGTGTGAAACAGTCAGATCAGCATCGGAGTTATaGAAGTTAAGACAACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: ILMETGWQRGGMGCETVRSASEL*KLRQQS Trigger: TGACTGTTGTCTTAACTTTCATAACTCCGATGCTGA...TCTGACTGTTTCACACCCCATACCTCCTCTCTGCCACCCTGTCTCCATGAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR TCA 90 bp | TCTATGAGTTCTGAGACACCACATACAATGTCCATTACTCTGAAACTCACATGCTGGCCTTCTGGATTCTaGGTGAGGCCCAGAAGGATA | + |
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Preference number: 4 (lower is better) Translates to: SMSSETPHTMSITLKLTCWPSGF*VRPRRI Trigger: TATCCTTCTGGGCCTCACTCAGAATCCAGAAGGCCA...GCATGTGAGTTTCAGAGTAATGGACATTGTATGTGGTGTCTCAGAACTCATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR TCA 90 bp | ATATACTCTCCCCTCAGTTCACAATTGCTCCAATTTAGAGAACTCAAAGAACAAAGGCCCCCAGCAGCATaGGAACACACACTCGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: IYSPLSSQLLQFRELKEQRPPAA*EHTLVD Trigger: ATCGACGAGTGTGTGTTCTCATGCTGCTGGGGGCCT...TTGTTCTTTGAGTTCTCTAAATTGGAGCAATTGTGAACTGAGGGGAGAGTATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR CCA 90 bp | TCTATGAGTTCTGAGACACCACATACAATGTCCATTACTCTGAAACTCACATGCAACCTTTTGGCCTTCTaGATTCTGAGTGAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SMSSETPHTMSITLKLTCNLLAF*ILSEAQ Trigger: CTGGGCCTCACTCAGAATCCAGAAGGCCAAAAGGTT...GCATGTGAGTTTCAGAGTAATGGACATTGTATGTGGTGTCTCAGAACTCATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR TCA 90 bp | CAGATTATTTGGAAAGACCACAAAGTGAGGGGTGTTGGGGTACAAGGAAACTACATACAAAGCTATCAATaGTATTTGGGCCACAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: QIIWKDHKVRGVGVQGNYIQSYQ*YLGHRK Trigger: CTTTCTGTGGCCCAAATATCATTGATAGCTTTGTAT...GTAGTTTCCTTGTACCCCAACACCCCTCACTTTGTGGTCTTTCCAAATAATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR GCA 90 bp | TACAATGTCCATTACTCTGAAACTCACATGCCTCACAGATTATTTGGAAAGACCGGTGACGGTACAAATTaGTCCTCCATTAGCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: YNVHYSETHMPHRLFGKTGDGTN*SSISNH Trigger: ATGATTGCTAATGGAGGAGCAATTTGTACCGTCACC...GGTCTTTCCAAATAATCTGTGAGGCATGTGAGTTTCAGAGTAATGGACATTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR CCA 90 bp | TCTATGAGTTCTGAGACACCACATACAATGTCCATTACTCTGAAACTCACATGCCACAGACTTATCAATTaGAAATGTGGATGTAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SMSSETPHTMSITLKLTCHRLIN*KCGCRP Trigger: AGGCCTACATCCACATTTCCAATTGATAAGTCTGTG...GCATGTGAGTTTCAGAGTAATGGACATTGTATGTGGTGTCTCAGAACTCATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR GCA 90 bp | ATATACTCTCCCCTCAGTTCACAATTGCTCCAATTTAGAGAACTCAAAGAACAAATGTGTACAAAGCTTTaGGCTTCCCTTCCAGACTAT | + |
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Preference number: 4 (lower is better) Translates to: IYSPLSSQLLQFRELKEQMCTKL*ASLPDY Trigger: ATAGTCTGGAAGGGAAGCGCAAAGCTTTGTACACAT...TTGTTCTTTGAGTTCTCTAAATTGGAGCAATTGTGAACTGAGGGGAGAGTATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR CCA 90 bp | ATATACTCTCCCCTCAGTTCACAATTGCTCCAATTTAGAGAACTCAAAGAACAAACAACCACAGTAATGTaGGATGCACATGTGTACAAA | + |
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Preference number: 4 (lower is better) Translates to: IYSPLSSQLLQFRELKEQTTTVM*DAHVYK Trigger: TTTGTACACATGTGCATCCCACATTACTGTGGTTGT...TTGTTCTTTGAGTTCTCTAAATTGGAGCAATTGTGAACTGAGGGGAGAGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR CAA 90 bp | ATCCTCATGGAGACAGGGTGGCAGAGAGGAGGTATGGGGTGTGAAACAGTCAGAATGATCTATAAAAACTaGAGTCATACAAGCCCGGAA | + |
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Preference number: 5 (lower is better) Translates to: ILMETGWQRGGMGCETVRMIYKN*SHTSPE Trigger: TTCCGGGCTTGTATGACTCAAGTTTTTATAGATCAT...TCTGACTGTTTCACACCCCATACCTCCTCTCTGCCACCCTGTCTCCATGAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR CAA 90 bp | TACAATGTCCATTACTCTGAAACTCACATGCCTCACAGATTATTTGGAAAGACCACCATGATGAGCAGATaGCCCATTACTGTCACAATG | + |
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Preference number: 5 (lower is better) Translates to: YNVHYSETHMPHRLFGKTTMMSR*PITVTM Trigger: CATTGTGACAGTAATGGGCAATCTGCTCATCATGGT...GGTCTTTCCAAATAATCTGTGAGGCATGTGAGTTTCAGAGTAATGGACATTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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| CDS-3UTR CAA 90 bp | TACAATGTCCATTACTCTGAAACTCACATGCCTCACAGATTATTTGGAAAGACCATGGAGCTAGATTTTTaGCTCCAAAGTCTCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: YNVHYSETHMPHRLFGKTMELDF*LQSLFI Trigger: TATGAAGAGACTTTGGAGCAAAAAATCTAGCTCCAT...GGTCTTTCCAAATAATCTGTGAGGCATGTGAGTTTCAGAGTAATGGACATTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137692.3 |
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