Pregenerated sensors for OLFR1232 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075092Ensembl transcript IDs: ENSMUST00000099785.2, ENSMUST00000213860.2, ENSMUST00000215679.2
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | CAAAGGAGATGGTTTTTCTCTTGTAGAGAGAGTCTAAAATCATCTTaGGTGTCATGGCAGAGGAGAAGCTTGCATCCAATAAAGACAGAA | + |
Preference number: 5 (lower is better) Translates to: QRRWFFSCRESLKSS*VSWQRRSLHPIKTE Trigger: TTCTGTCTTTATTGGATGCAAGCTTCTCCTCTGCCATGACACCCAAGATGATTTTAGACTCTCTCTACAAGAGAAAAACCATCTCCTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099785.2 ENSMUST00000213860.2 ENSMUST00000215679.2 |
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CDS GCA 72 bp | TGGCCACCACAAAAAGGCCAAAGATGTGAGTGTCGGTaGAGGCAAGCTCCAGTAATGGAAATAAGTCGCACA | + |
Preference number: 6 (lower is better) Translates to: WPPQKGQRCECR*RQAPVMEISRT Trigger: TGTGCGACTTATTTCCATTACTGGAGCTTGCCTGCACCGACACTCACATCTTTGGCCTTTTTGTGGTGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099785.2 ENSMUST00000213860.2 ENSMUST00000215679.2 |
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CDS CCA 72 bp | TGGTTTTTCTCTTGTAGAGAGAGTCTAAAATCATCTTaGGTGTCATGGCAGAGGAGAAGCTTGCATCCAATA | + |
Preference number: 6 (lower is better) Translates to: WFFSCRESLKSS*VSWQRRSLHPI Trigger: TATTGGATGCAAGCTTCTCCTCTGCCATGACACCCAAGATGATTTTAGACTCTCTCTACAAGAGAAAAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099785.2 ENSMUST00000213860.2 ENSMUST00000215679.2 |